Metagenome / Metatranscriptome Family F086094

Basic Information
Family ID	F086094
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	42 residues
Representative Sequence	PDEPNKPLAVFKIVGGCGALVLIGVWLYAAGKRRAARPA
Number of Associated Samples	100
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	95.50 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	94
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.58

Most Common Taxonomy
Group	Bacteria (53.153 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (9.009 % of family members)
Environment Ontology (ENVO)	Unclassified (28.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (46.847 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.27% β-sheet: 0.00% Coil/Unstructured: 53.73%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF08669	GCV_T_C	57.66
PF13826	DUF4188	4.50
PF00326	Peptidase_S9	4.50
PF06996	T6SS_TssG	0.90
PF00535	Glycos_transf_2	0.90
PF00486	Trans_reg_C	0.90
PF13483	Lactamase_B_3	0.90
PF00881	Nitroreductase	0.90
PF00005	ABC_tran	0.90
PF01609	DDE_Tnp_1	0.90
PF12802	MarR_2	0.90
PF01797	Y1_Tnp	0.90
PF13520	AA_permease_2	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.90
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.90
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.90
COG3520	Predicted component of the type VI protein secretion system	Intracellular trafficking, secretion, and vesicular transport [U]	0.90
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.90
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.90
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	19.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.70 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	9.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.80 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	9.01 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	1.80 %
Rhodanobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae	0.90 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.80 %
Silvibacterium	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium	1.80 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.80 %
Rudaea	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.80 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.80 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.80 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	0.90 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.80 %
Silvibacterium bohemicum	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1.80 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	1.80 %
Bradyrhizobium sp. WSM1417	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	0.90 %
Rudaea cellulosilytica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_104230361	All Organisms → cellular organisms → Bacteria → Acidobacteria	780	Open in IMG/M
3300000955\|JGI1027J12803_108631301	All Organisms → cellular organisms → Bacteria → Acidobacteria	824	Open in IMG/M
3300001593\|JGI12635J15846_10628557	Not Available	623	Open in IMG/M
3300001593\|JGI12635J15846_10643680	Not Available	614	Open in IMG/M
3300002245\|JGIcombinedJ26739_100701409	All Organisms → cellular organisms → Bacteria	890	Open in IMG/M
3300004080\|Ga0062385_10573397	All Organisms → cellular organisms → Bacteria	709	Open in IMG/M
3300005434\|Ga0070709_11469623	All Organisms → cellular organisms → Bacteria	553	Open in IMG/M
3300005541\|Ga0070733_10612917	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	730	Open in IMG/M
3300005712\|Ga0070764_10234569	All Organisms → cellular organisms → Bacteria	1040	Open in IMG/M
3300005712\|Ga0070764_10846805	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	570	Open in IMG/M
3300005764\|Ga0066903_101456295	Not Available	1290	Open in IMG/M
3300005993\|Ga0080027_10206432	Not Available	768	Open in IMG/M
3300006047\|Ga0075024_100616627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	585	Open in IMG/M
3300006050\|Ga0075028_100012462	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	3554	Open in IMG/M
3300006052\|Ga0075029_100148145	All Organisms → cellular organisms → Bacteria	1441	Open in IMG/M
3300006059\|Ga0075017_100840828	All Organisms → cellular organisms → Bacteria → Proteobacteria	711	Open in IMG/M
3300006086\|Ga0075019_10650630	All Organisms → cellular organisms → Bacteria	664	Open in IMG/M
3300006162\|Ga0075030_101277941	All Organisms → cellular organisms → Bacteria → Proteobacteria	576	Open in IMG/M
3300006162\|Ga0075030_101324679	All Organisms → cellular organisms → Bacteria → Proteobacteria	565	Open in IMG/M
3300006176\|Ga0070765_100262647	All Organisms → cellular organisms → Bacteria → Proteobacteria	1586	Open in IMG/M
3300009522\|Ga0116218_1116905	Not Available	1213	Open in IMG/M
3300009638\|Ga0116113_1166062	All Organisms → cellular organisms → Bacteria	559	Open in IMG/M
3300009641\|Ga0116120_1216329	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300009839\|Ga0116223_10051592	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	2683	Open in IMG/M
3300010358\|Ga0126370_10078291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales → Rhodanobacteraceae → Rudaea → Rudaea cellulosilytica	2212	Open in IMG/M
3300010360\|Ga0126372_12537592	Not Available	564	Open in IMG/M
3300012357\|Ga0137384_11509445	Not Available	521	Open in IMG/M
3300012508\|Ga0157315_1062366	Not Available	529	Open in IMG/M
3300012922\|Ga0137394_10155551	All Organisms → cellular organisms → Bacteria	1946	Open in IMG/M
3300012927\|Ga0137416_11246861	Not Available	670	Open in IMG/M
3300012929\|Ga0137404_10439296	All Organisms → cellular organisms → Bacteria	1156	Open in IMG/M
3300012930\|Ga0137407_11467138	Not Available	649	Open in IMG/M
3300012986\|Ga0164304_10380632	Not Available	996	Open in IMG/M
3300014169\|Ga0181531_10560484	Not Available	707	Open in IMG/M
3300014169\|Ga0181531_10964837	Not Available	535	Open in IMG/M
3300014501\|Ga0182024_12700836	Not Available	531	Open in IMG/M
3300014657\|Ga0181522_10644858	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300016371\|Ga0182034_10348859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1201	Open in IMG/M
3300016750\|Ga0181505_10412177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	1136	Open in IMG/M
3300017822\|Ga0187802_10200624	All Organisms → cellular organisms → Bacteria → Acidobacteria	767	Open in IMG/M
3300017924\|Ga0187820_1121663	Not Available	766	Open in IMG/M
3300017932\|Ga0187814_10272702	Not Available	644	Open in IMG/M
3300017948\|Ga0187847_10695785	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300017955\|Ga0187817_11023283	Not Available	529	Open in IMG/M
3300017974\|Ga0187777_11270997	Not Available	540	Open in IMG/M
3300018009\|Ga0187884_10050370	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1948	Open in IMG/M
3300018019\|Ga0187874_10128413	Not Available	1085	Open in IMG/M
3300018021\|Ga0187882_1202931	All Organisms → cellular organisms → Bacteria	781	Open in IMG/M
3300018035\|Ga0187875_10418673	Not Available	715	Open in IMG/M
3300018038\|Ga0187855_10193951	Not Available	1200	Open in IMG/M
3300018042\|Ga0187871_10792776	Not Available	528	Open in IMG/M
3300018043\|Ga0187887_10603816	Not Available	648	Open in IMG/M
3300018062\|Ga0187784_10317459	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300019888\|Ga0193751_1272649	Not Available	504	Open in IMG/M
3300020021\|Ga0193726_1014584	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4111	Open in IMG/M
3300020580\|Ga0210403_10718825	All Organisms → cellular organisms → Bacteria	799	Open in IMG/M
3300021168\|Ga0210406_10360019	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300021168\|Ga0210406_10427476	Not Available	1057	Open in IMG/M
3300021180\|Ga0210396_10979507	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	717	Open in IMG/M
3300021432\|Ga0210384_10931586	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300021433\|Ga0210391_10035421	All Organisms → cellular organisms → Bacteria	3998	Open in IMG/M
3300021433\|Ga0210391_10119735	All Organisms → cellular organisms → Bacteria	2072	Open in IMG/M
3300021474\|Ga0210390_11141674	Not Available	631	Open in IMG/M
3300021477\|Ga0210398_10773602	Not Available	774	Open in IMG/M
3300023019\|Ga0224560_101348	Not Available	1718	Open in IMG/M
3300025473\|Ga0208190_1096876	Not Available	580	Open in IMG/M
3300025581\|Ga0208355_1018276	All Organisms → cellular organisms → Bacteria	2120	Open in IMG/M
3300025604\|Ga0207930_1060500	Not Available	924	Open in IMG/M
3300025939\|Ga0207665_10682384	Not Available	807	Open in IMG/M
3300026557\|Ga0179587_10479917	Not Available	815	Open in IMG/M
3300027164\|Ga0208994_1018026	All Organisms → cellular organisms → Bacteria	988	Open in IMG/M
3300027587\|Ga0209220_1158058	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300027604\|Ga0208324_1121923	Not Available	720	Open in IMG/M
3300027641\|Ga0208827_1043893	Not Available	1529	Open in IMG/M
3300027678\|Ga0209011_1028672	All Organisms → cellular organisms → Bacteria	1777	Open in IMG/M
3300027678\|Ga0209011_1156280	Not Available	639	Open in IMG/M
3300027824\|Ga0209040_10223296	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	962	Open in IMG/M
3300027854\|Ga0209517_10028419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4793	Open in IMG/M
3300027879\|Ga0209169_10464965	Not Available	664	Open in IMG/M
3300027882\|Ga0209590_10566891	All Organisms → cellular organisms → Bacteria → Acidobacteria	731	Open in IMG/M
3300027889\|Ga0209380_10378337	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Silvibacterium → Silvibacterium bohemicum	831	Open in IMG/M
3300027911\|Ga0209698_10029198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. WSM1417	5073	Open in IMG/M
3300028676\|Ga0302167_10126462	All Organisms → cellular organisms → Bacteria	730	Open in IMG/M
3300028800\|Ga0265338_10175041	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1641	Open in IMG/M
3300028800\|Ga0265338_10937883	Not Available	588	Open in IMG/M
3300028909\|Ga0302200_10165142	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300029701\|Ga0222748_1072087	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300029903\|Ga0247271_108396	Not Available	1616	Open in IMG/M
3300029939\|Ga0311328_10396706	Not Available	993	Open in IMG/M
3300029945\|Ga0311330_10911632	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300030014\|Ga0302175_10157572	Not Available	539	Open in IMG/M
3300030659\|Ga0316363_10201084	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	830	Open in IMG/M
3300030706\|Ga0310039_10058539	Not Available	1688	Open in IMG/M
3300031028\|Ga0302180_10389735	Not Available	699	Open in IMG/M
3300031261\|Ga0302140_10218550	All Organisms → cellular organisms → Bacteria	1702	Open in IMG/M
3300031524\|Ga0302320_12255834	All Organisms → cellular organisms → Bacteria	501	Open in IMG/M
3300031708\|Ga0310686_106966592	All Organisms → cellular organisms → Bacteria	762	Open in IMG/M
3300031718\|Ga0307474_11042326	Not Available	647	Open in IMG/M
3300031820\|Ga0307473_10502267	Not Available	819	Open in IMG/M
3300032180\|Ga0307471_100191195	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2034	Open in IMG/M
3300032180\|Ga0307471_104308833	Not Available	502	Open in IMG/M
3300032261\|Ga0306920_103651855	All Organisms → cellular organisms → Bacteria → Acidobacteria	566	Open in IMG/M
3300032783\|Ga0335079_11788110	Not Available	598	Open in IMG/M
3300032805\|Ga0335078_11740583	Not Available	681	Open in IMG/M
3300033433\|Ga0326726_10855086	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	881	Open in IMG/M
3300034195\|Ga0370501_0038562	Not Available	1483	Open in IMG/M
3300034282\|Ga0370492_0325214	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	624	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.30%
Host-Associated	Host-Associated	2.70%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.17%
Aquatic	Environmental → Aquatic	26.13%
Plants	Host-Associated → Plants	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	63.06%
Freshwater	Environmental → Aquatic → Freshwater	18.92%
Peat	Environmental → Terrestrial → Peat	8.11%
Sediment	Environmental → Aquatic → Sediment	7.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.80%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	40.54%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	18.92%
Loam	Environmental → Terrestrial → Soil → Loam	15.32%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	7.21%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	7.21%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.72%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.22%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.61%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	11.71%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.11%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	3.60%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.80%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	9.01%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.11%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	7.21%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	6.31%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	6.31%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	4.50%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	4.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	4.50%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	3.60%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.60%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	2.70%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	2.70%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.80%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.90%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.90%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.90%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004080	Coassembly of ECP04_OM1, ECP04_OM2, ECP04_OM3	Environmental	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005712	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009641	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_150	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012508	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.2.old.270510	Host-Associated	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014501	Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014657	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaG	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016750	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017948	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_10	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018019	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_150	Environmental	Open in IMG/M
3300018021	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_19_150	Environmental	Open in IMG/M
3300018035	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_10	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300023019	Soil microbial communities from Bohemian Forest, Czech Republic ? CSU1	Environmental	Open in IMG/M
3300025473	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_10 (SPAdes)	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025604	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027164	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_O3 (SPAdes)	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027854	Peat soil microbial communities from Weissenstadt, Germany - SII-2010 (SPAdes)	Environmental	Open in IMG/M
3300027879	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 4 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027889	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028676	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N1_1	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300028909	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N3_1	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029903	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Fen703	Environmental	Open in IMG/M
3300029939	I_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029945	I_Bog_N2 coassembly	Environmental	Open in IMG/M
3300030014	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Fen_N3_3	Environmental	Open in IMG/M
3300030659	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG (v2)	Environmental	Open in IMG/M
3300030706	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_6_BS metaG (v2)	Environmental	Open in IMG/M
3300031028	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2	Environmental	Open in IMG/M
3300031261	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Bog_E1_1	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032805	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.2	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034195	Peat soil microbial communities from wetlands in Alaska, United States - Sheep_creek_fen_01D_17	Environmental	Open in IMG/M
3300034282	Peat soil microbial communities from wetlands in Alaska, United States - Eight_mile_03D_16	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1042303612	3300000955	Soil	SLLPQPDEPNQALAVLKIIGLTGALLGIGVIIYAFGKRRARAT*
JGI1027J12803_1086313012	3300000955	Soil	DEPNKPLAVFKIVGGCGALLLVGVWIYVAGKRRAARNV*
JGI12635J15846_106285571	3300001593	Forest Soil	PNKLLAVVKIVGGCGALVVIGVGLYWAGKRRARRTHVSR*
JGI12635J15846_106436801	3300001593	Forest Soil	PLAVFKIVGGCGALVLIGVGLYWAGKRRAHQSHGLSH*
JGIcombinedJ26739_1007014092	3300002245	Forest Soil	ANKPLAVFKIVGATGALVLVGVWIFLAGKRRAERPS*
Ga0062385_105733971	3300004080	Bog Forest Soil	EPNKPLALLKIVGGTGALLLVGGWIYAAGKHRAARAVPGK*
Ga0070709_114696232	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	PQPDEPNKLLAVIKVVGLSGLLVLIGTWIYWAGKKRALR*
Ga0070733_106129171	3300005541	Surface Soil	PDEPNKPLALLKIVGGCGALLLIGVWIYAAGKRRAARMSLT*
Ga0070764_102345691	3300005712	Soil	IPQPDEPNKPLALFKIVGGTGVLVLVGAWLYIAGKRRARAQSQPT*
Ga0070764_108468052	3300005712	Soil	DEPNKPLALLKIVGGCGALVLIGVWLYVAGKRRAAQPNM*
Ga0066903_1014562952	3300005764	Tropical Forest Soil	PNKPLAVFKVVGGCGALLLIGVFLYLAGKRRAVLV*
Ga0080027_102064321	3300005993	Prmafrost Soil	KPLALFKVVGGCGALVLIGAWLYVAGKRRARRQVS*
Ga0075024_1006166271	3300006047	Watersheds	PDEPNKLLAVIKIVGLSGLLVLIGAWIYWAVRRRARQGSTFL*
Ga0075028_1000124621	3300006050	Watersheds	PPPDEPNKPLAVFKIVGGCGALLVIGMWLYWAGKRRAAQTT*
Ga0075029_1001481454	3300006052	Watersheds	LSVLPPPDEPNKPLAVFKIVGGCGALLAIGMWLYWTGRRRANHQEA*
Ga0075017_1008408281	3300006059	Watersheds	PQPDEPNKPLALLKIVGGCGALLLIGAWIYVAGKRRARSSRQQGLT*
Ga0075019_106506302	3300006086	Watersheds	ILLSLIPQPDEPNKPLALLKIVGGCGALLLVGAWIYWSGKRRAWSGQ*
Ga0075030_1012779412	3300006162	Watersheds	EPNKPLALLKIVGGCGALLLIGAWIYVAGKRRARSSRQQGLT*
Ga0075030_1013246792	3300006162	Watersheds	DEPNKPLALLKIVGGCGALLLIGAGLYIAGKHRAARAEIA*
Ga0070716_1004157962	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	PQPDESNKALALLKILGGCGALLLVGVWLYVAGKSRAGRVPHQPKIV*
Ga0070765_1002626473	3300006176	Soil	PDEPNKPLALLKIVGGTGALLLIGAWMYWAGKRRTAQNAQWR*
Ga0116218_11169051	3300009522	Peatlands Soil	KPLALFKIVGGTGAIVLIGAWIYWAGKRRAARGTKTVT*
Ga0116113_11660621	3300009638	Peatland	IALSVLPPPDEPNKPLAVFKIVGGCGGLVLIGAWLFWSGKRRAQRHPSQQA*
Ga0116120_12163292	3300009641	Peatland	DEPNKPLALFKIVGGTAALLLLGIGIYVAGRQRGSENI*
Ga0116223_100515923	3300009839	Peatlands Soil	LSVLPPPDEPNKPLAVFKIVGGCGALVLIGVGLHWVGKRRAGSIS*
Ga0126370_100782913	3300010358	Tropical Forest Soil	LPPPDEPNKPLAVFKIVGGCGALLLIGMWIYWAGRRRAKRIEAHAGI*
Ga0126372_125375921	3300010360	Tropical Forest Soil	DEPNKPLAVIKVVGLSGLMVLIGAWIYLAGKRKAQQD*
Ga0137384_115094451	3300012357	Vadose Zone Soil	PLAMLKVIGGCGALVLVGAWIYWAGKRRATNAASRV*
Ga0157315_10623662	3300012508	Arabidopsis Rhizosphere	DEPNKILAVVKIVGLSGILVGMGAWIYWSGKRRAARRRK*
Ga0137394_101555511	3300012922	Vadose Zone Soil	LPPPDEPNKPLAVFKIVGGCGALVLIGMWLYWAGKRRALRDQQILSR*
Ga0137416_112468611	3300012927	Vadose Zone Soil	PPDEPNKLLAVFKIVGGCGALVLIGVGLYWAGKRRARRSAEFSR*
Ga0137404_104392961	3300012929	Vadose Zone Soil	PNKALAVFKIVGGCGALVLIGMWLYWSGKRRARRAA*
Ga0137407_114671382	3300012930	Vadose Zone Soil	QPDEPNKPLALLKIVGGTAVMVLIGVCLYVAGKGRAQNSGLRT*
Ga0164304_103806322	3300012986	Soil	EPNKLLAVIKIVGLSGLLVLIGAWIYWAGKRRAAREQSP*
Ga0181531_105604841	3300014169	Bog	PNKPLALFKVVGATMALVLLGVWIYATGKRRAASKAGAST*
Ga0181531_109648372	3300014169	Bog	VIPQPDEPNKPLAILKVVGGSIVLVLIGAWIYWAGKRRANLTRK*
Ga0182024_127008362	3300014501	Permafrost	KALAVFKIVGGCGALVVIGVGLYWAGKRRAAWLL*
Ga0181522_106448583	3300014657	Bog	DEPNKPLAVFKIVGGCGALVLIGVGLYCLGKRRAQRNPSIWH*
Ga0182034_103488593	3300016371	Soil	PQPDEPNKPLALFKVVGGCGALLLVGVWIYLAGKRRALRTDGPSR
Ga0181505_104121773	3300016750	Peatland	LIPQPDEPNKPLALLKIVGGTGALVLVGMWIYLAGKRRAAKSSMEK
Ga0187802_102006241	3300017822	Freshwater Sediment	PQPDEPNKPLALFKVVGGCGALLLIGAWIYIAGKRRAARPA
Ga0187820_11216631	3300017924	Freshwater Sediment	PQPDEPNKLLALLKIVGGCGALLLIGVWIYRAGKRRAT
Ga0187814_102727021	3300017932	Freshwater Sediment	LSLIPQPDEPNKPLALFKVVGGCGALVLIGAWIYIAGKRRAAREAAKET
Ga0187847_106957852	3300017948	Peatland	PDEPNKPLAVFKIVGGCGALLLIGAGLHWTGKRRAQRTADASR
Ga0187817_110232831	3300017955	Freshwater Sediment	LSLIPPPDEPNKPLAVLKVVGGCGALLFIGAWIYVAGKHRAAQASARET
Ga0187777_112709972	3300017974	Tropical Peatland	DEPNKPLALFKIVGGTGALLLVGVWLYRAGKRRAIA
Ga0187884_100503703	3300018009	Peatland	LPPPDEPNKPLAVLKIVGGCGALLLIGVWLYWTGKRRAQRTM
Ga0187874_101284132	3300018019	Peatland	DEPNKPLALFKIIGGTGALVLIGAWIYWAGKRRAARVATRET
Ga0187882_12029311	3300018021	Peatland	NKPLAVFKIVGGCGALLLIGVWLYWAGKRRAQRNPDVSR
Ga0187875_104186732	3300018035	Peatland	IPQPDEPNKPLALLKIVGGCAALVLIGVGIYVAGKHRAGPR
Ga0187855_101939512	3300018038	Peatland	PDEPNKPLAVFKIVGGCGALVLIGVWLYAAGKRRAARPA
Ga0187871_107927761	3300018042	Peatland	QPDEPNKLLALLKIVGGTGALVLIGAWIYVAGKHRAARAKLE
Ga0187887_106038162	3300018043	Peatland	IPQPDEPNKPLALFKIIGGTGALVLIGAWIYWAGKRRAARVATRET
Ga0187784_103174591	3300018062	Tropical Peatland	SVIPAPDEANKPLAVVKVVGGSIVLIAAGAGTYWFGKRQR
Ga0193751_12726492	3300019888	Soil	IPQPDEPNKLLAVIKIVGLSGLLVLIGAWIYWAGKRRALK
Ga0193726_10145844	3300020021	Soil	PQPDEPNKLLAVIKIVGLSGLMVLIGAWIYWAGKRRATRQRVLEP
Ga0210403_107188253	3300020580	Soil	LIPQPDEPNKPLALFKIVGGTGALVLIGAWIYWAGKRRAHAGKKTQAALS
Ga0210406_103600191	3300021168	Soil	NKALAVFKIVGGCGALVLIGVGLYWAGKRRAQKSPHFSR
Ga0210406_104274762	3300021168	Soil	PNKTLAVFKIVGGCGALVLIGVGLYWAGKRRAQRSPGLFH
Ga0210396_109795071	3300021180	Soil	QPDEPNKPLALLKIVGGTGALLLIGAWMYWAGKRRTAQNAQWR
Ga0210384_109315862	3300021432	Soil	EPNKPLAVFKIVGGCGALVLIGVGLYWAGKRRAQKSPDFSR
Ga0210391_100354215	3300021433	Soil	SLIPQPDEPNKPLALLKIVGGTGALLLIGAWMYWAGKRRTAQNAQWR
Ga0210391_101197351	3300021433	Soil	SLIPQPDEPNKLLALLKIVGGTGVLVLVGIGIYAAGRRRAARA
Ga0210390_111416741	3300021474	Soil	AVSVLPPPDEPNKPLAVFKIVGGCGALVLIGVGLYWTGKRRAAKAI
Ga0210398_107736021	3300021477	Soil	LIPQPDEPNKLLALLKIVGGTGVLVLVGIGIYAAGRRRAARA
Ga0224560_1013482	3300023019	Soil	SLIPQPDEPNKPLALLKIVGGTGALVLMGAGIYIAGKRRAAKPVIET
Ga0208190_10968761	3300025473	Peatland	IPQPDEPNKLLALSKIVGGTGALVVVGVWLYRAGKRRAADSVLTH
Ga0208355_10182763	3300025581	Arctic Peat Soil	PNKPLAALKIVGGCGALLLIGVGLYWAGKRRAQTGN
Ga0207930_10605002	3300025604	Arctic Peat Soil	NKPLAMLKVIGGCGALVLIGAWIYWAGKRRAARDASPA
Ga0207665_102618231	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LIPQPDESNKALALLKILGGCGALLLVGVWLYVAGKSRAGRVPHQPKIV
Ga0207665_106823842	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	LIPQPDEPNKPLALFKVVGGCGALVLIGAWLYMAGKRRAAEG
Ga0179587_104799172	3300026557	Vadose Zone Soil	QAEELNKPLALLKVVGGTAVLVSLGVWIYIAGKRRAARAPQSEM
Ga0208994_10180263	3300027164	Forest Soil	PAPDEPNKPLAVFKIVGGTGALLVFGAWLYLRGKRRARII
Ga0209220_11580582	3300027587	Forest Soil	DEPNKLLAVFKIVGGCGALVLIGIGLYWAGKRRARRSPDFSR
Ga0208324_11219232	3300027604	Peatlands Soil	LALFKIVGGTGAIVLIGAWIYWAGKRRAARGTKTVT
Ga0208827_10438931	3300027641	Peatlands Soil	PNKPLALFKVVGGCGALVLIGVWIYRAGRKRAIAT
Ga0209011_10286721	3300027678	Forest Soil	ALSVLPPPDEPNKLLAVFKIVGGCGALVLIGIGLYWAGKRRARRSPDFSR
Ga0209011_11562801	3300027678	Forest Soil	EPNKPLALLKIVGGTGALMVVGGLIYVAGKRRAARLHEET
Ga0209040_102232963	3300027824	Bog Forest Soil	QPDEPNKPLALLKIVGGTAVLVLVGIGIYVAGKRRAAQNKIA
Ga0209517_100284195	3300027854	Peatlands Soil	PPPDEPNKPLAVFKIVGGCGALVLIGVGLHWVGKRRAGSIS
Ga0209169_104649651	3300027879	Soil	KPLALFKIVGGTGVLVLVGAWLYIAGKRRARAQSQPT
Ga0209590_105668912	3300027882	Vadose Zone Soil	EPNKPLALFKVVGGCGALVAIGAGIYVAGKRRAKLG
Ga0209380_103783373	3300027889	Soil	QPDEANKPLALFKIVGGTGLLVLVGVWIYAAGKRRASR
Ga0209698_100291981	3300027911	Watersheds	LFTIALSVLPPPDEPNKTLAVFKIVGGCGALVLIGAGLYWAGKRRAARMT
Ga0302167_101264621	3300028676	Fen	DEPNKPLAVFKIVGGCGALVLIGMWLYWSGKRRAARTT
Ga0265338_101750412	3300028800	Rhizosphere	PDEPNKALALFKVVGGTGALVVIGAWIYWAGKRRAAREHQLT
Ga0265338_109378832	3300028800	Rhizosphere	NKPLAMFKVIGGCGALVLIGAWIYWAGKRRSATDASAA
Ga0302200_101651421	3300028909	Bog	VLPPPDEPNKPLAVFKIVGGCGGLVLIGAWLFWSGKRRAQRHPSQQA
Ga0222748_10720871	3300029701	Soil	LALFKIVGGTGALVLIGAWIYWAGKRRAHTGKKTQAALS
Ga0247271_1083961	3300029903	Soil	SMLPPPDEPNKPLAVFKIVGGCGALVLMGVGLYWAGKRRQL
Ga0311328_103967061	3300029939	Bog	PLALLKIVGGTGVLVLVGVAIYFAGKRRAAQSVLTN
Ga0311330_109116321	3300029945	Bog	PDEPNKPLALLKIVGGTGVLVLVGAGIYNTGKRRGARSIA
Ga0302175_101575721	3300030014	Fen	PDEPNKPLAVFKIVGGCGALLLIGVWLYWAGKKRAMAK
Ga0316363_102010842	3300030659	Peatlands Soil	LSVLPPPDEPNKPLAVFKIVGGCGALVLIGVGLHWVGKRRAGSIS
Ga0310039_100585391	3300030706	Peatlands Soil	DEPNKPLALFKIVGGTGAIVLIGAWIYWAGKRRAARGTKTVT
Ga0302180_103897351	3300031028	Palsa	QADEPNKTLALFKILGATTALVLIGVWIYAAGKRRAAKEVGAL
Ga0302140_102185501	3300031261	Bog	QPDEPNKPLALLKIVGGTGVLVLVGAGIYNTGKRRGARSIA
Ga0302320_122558341	3300031524	Bog	SVLPPPDEPNKALAVLKIVGGCGALVLLGVGLYWSGKRRAQRGVGLSTDAASTGPR
Ga0310686_1069665921	3300031708	Soil	NKLLALLKIVGGTTALVLIGLGIYVAAKRKAAAIG
Ga0307474_110423262	3300031718	Hardwood Forest Soil	LIPQPDEPNKPLALFKIVGGTGALVLIGAWIYAAGKHRAASPMQNKLS
Ga0307477_100242124	3300031753	Hardwood Forest Soil	KALALLKILGGCGALLLVGVWLYVAGKRRAARVAHQPKIV
Ga0307473_105022672	3300031820	Hardwood Forest Soil	VLPQPDEPNKSLAVVKIVGGCGVLVLIGVGLYWTGKRRAMRSHGLSH
Ga0307478_102973681	3300031823	Hardwood Forest Soil	SLIPQPDEPNKALALLKILGGCGALLLVGVWLYVAGKRRAARGAHQPKIV
Ga0307471_1001911953	3300032180	Hardwood Forest Soil	LPPPDEPNKLLAVFKIVGGCGALVLIGVGLYWAGKRRAVTR
Ga0307471_1043088332	3300032180	Hardwood Forest Soil	PQPDEPNKLLAVIKIVGLSGLLVLIGAWIYWAGKRRAQSS
Ga0306920_1036518551	3300032261	Soil	ISVIPQHDEPNKLLAVIKVVGGSAVLLAVGAWLYWAGKQRASI
Ga0335079_117881101	3300032783	Soil	TSLTILLSLLPQPDEPNKLLAVVKIVGSTGAILAVGAWIYWTGKRRTT
Ga0335078_117405831	3300032805	Soil	DEPNKPLAVLKIVGGCAALILVGVWIYVAGKRRAARALIKSDTPR
Ga0326726_108550861	3300033433	Peat Soil	DEPNKLLAVIKIVGLSGLLVLIGAWIYWAGKKRALSKTT
Ga0370501_0038562_4_135	3300034195	Untreated Peat Soil	LSLIPQPDEPNKLLAVIKIVGLSGLLVLIGAWIYWAGKKRALR
Ga0370492_0325214_2_121	3300034282	Untreated Peat Soil	PNKPLALFKIVGGTGVLVLVGVGIYVVGKHRAAASIQNT

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.58
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.58
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086094

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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