Metagenome / Metatranscriptome Family F086031

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086031
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	MSAAQVLEQVNKLPFEEQREVFEHLREKFDDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Number of Associated Samples	92
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.77 %
% of genes near scaffold ends (potentially truncated)	19.82 %
% of genes from short scaffolds (< 2000 bps)	87.39 %
Associated GOLD sequencing projects	88
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.288 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen (13.514 % of family members)
Environment Ontology (ENVO)	Unclassified (24.324 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.838 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.46% β-sheet: 0.00% Coil/Unstructured: 45.54%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF05016	ParE_toxin	43.24
PF01882	DUF58	14.41
PF09720	Unstab_antitox	3.60
PF07726	AAA_3	1.80
PF04014	MazE_antitoxin	1.80
PF02585	PIG-L	0.90
PF08238	Sel1	0.90
PF02557	VanY	0.90
PF03006	HlyIII	0.90
PF02899	Phage_int_SAM_1	0.90
PF02887	PK_C	0.90
PF08281	Sigma70_r4_2	0.90
PF01797	Y1_Tnp	0.90
PF13584	BatD	0.90
PF01687	Flavokinase	0.90
PF06347	SH3_4	0.90
PF12344	UvrB	0.90
PF10387	DUF2442	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1721	Uncharacterized conserved protein, DUF58 family, contains vWF domain	Function unknown [S]	14.41
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	0.90
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	0.90
COG1272	Predicted membrane channel-forming protein YqfA, hemolysin III family	Intracellular trafficking, secretion, and vesicular transport [U]	0.90
COG1876	LD-carboxypeptidase LdcB, LAS superfamily	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1943	REP element-mobilizing transposase RayT	Mobilome: prophages, transposons [X]	0.90
COG2120	N-acetylglucosaminyl deacetylase, LmbE family	Carbohydrate transport and metabolism [G]	0.90
COG2173	D-alanyl-D-alanine dipeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG4973	Site-specific recombinase XerC	Replication, recombination and repair [L]	0.90
COG4974	Site-specific recombinase XerD	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	89.19 %
Unclassified	root	N/A	10.81 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.29 %
Unclassified	root	N/A	10.81 %
Viruses	superkingdom	All Organisms → Viruses	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.29 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	69.37 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	69.37 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	36.94 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	30.63 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	36.94 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.63 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3	family	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3	36.04 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.63 %
Unclassified	root	N/A	10.81 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Verrucomicrobia subdivision 3	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3	31.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.63 %
Unclassified	root	N/A	10.81 %
Pedosphaera	genus	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera	4.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	31.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.63 %
Unclassified	root	N/A	10.81 %
Pedosphaera parvula	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4.50 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Verrucomicrobia subdivision 3 bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	31.53 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	30.63 %
Unclassified	root	N/A	10.81 %
Pedosphaera parvula Ellin514	strain	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459014\|G1P06HT01AXSC4	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	552	Open in IMG/M
3300003892\|Ga0063012_10040523	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3022	Open in IMG/M
3300004806\|Ga0007854_10188756	All Organisms → cellular organisms → Bacteria	886	Open in IMG/M
3300005175\|Ga0066673_10868310	All Organisms → cellular organisms → Bacteria	514	Open in IMG/M
3300005293\|Ga0065715_10791655	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300005831\|Ga0074471_10261161	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300005836\|Ga0074470_10773006	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1370	Open in IMG/M
3300005836\|Ga0074470_11560000	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1013	Open in IMG/M
3300005993\|Ga0080027_10177641	Not Available	826	Open in IMG/M
3300006052\|Ga0075029_100789327	All Organisms → cellular organisms → Bacteria	646	Open in IMG/M
3300006126\|Ga0007855_1120593	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	543	Open in IMG/M
3300006174\|Ga0075014_100312292	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	832	Open in IMG/M
3300006796\|Ga0066665_10536688	All Organisms → cellular organisms → Bacteria	953	Open in IMG/M
3300006797\|Ga0066659_11146243	All Organisms → cellular organisms → Bacteria	650	Open in IMG/M
3300009012\|Ga0066710_104587644	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	516	Open in IMG/M
3300009137\|Ga0066709_101158677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1138	Open in IMG/M
3300009143\|Ga0099792_10150366	Not Available	1282	Open in IMG/M
3300009161\|Ga0114966_10120908	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1736	Open in IMG/M
3300009175\|Ga0073936_10717080	Not Available	554	Open in IMG/M
3300009502\|Ga0114951_10203898	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1058	Open in IMG/M
3300009518\|Ga0116128_1135214	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	711	Open in IMG/M
3300009553\|Ga0105249_11365690	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	780	Open in IMG/M
3300010371\|Ga0134125_12798578	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	530	Open in IMG/M
3300010397\|Ga0134124_10102261	Not Available	2496	Open in IMG/M
3300010397\|Ga0134124_10571597	All Organisms → cellular organisms → Bacteria	1103	Open in IMG/M
3300010938\|Ga0137716_10007557	All Organisms → cellular organisms → Bacteria	22438	Open in IMG/M
3300010938\|Ga0137716_10116007	All Organisms → cellular organisms → Bacteria	1949	Open in IMG/M
3300012199\|Ga0137383_10648419	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	772	Open in IMG/M
3300012200\|Ga0137382_10529820	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	838	Open in IMG/M
3300012207\|Ga0137381_10062329	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	3101	Open in IMG/M
3300012209\|Ga0137379_11009635	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	737	Open in IMG/M
3300012211\|Ga0137377_10683426	All Organisms → cellular organisms → Bacteria	961	Open in IMG/M
3300012232\|Ga0137435_1094598	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	896	Open in IMG/M
3300012353\|Ga0137367_10758203	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	674	Open in IMG/M
3300012357\|Ga0137384_10465804	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1039	Open in IMG/M
3300012362\|Ga0137361_11142473	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	700	Open in IMG/M
3300012469\|Ga0150984_121841444	Not Available	721	Open in IMG/M
3300014161\|Ga0181529_10002322	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	22976	Open in IMG/M
3300014161\|Ga0181529_10123176	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1615	Open in IMG/M
3300014168\|Ga0181534_10150865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1191	Open in IMG/M
3300014200\|Ga0181526_10437791	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	829	Open in IMG/M
3300014325\|Ga0163163_10387846	All Organisms → cellular organisms → Bacteria	1454	Open in IMG/M
3300014490\|Ga0182010_10581249	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	624	Open in IMG/M
3300014493\|Ga0182016_10354481	Not Available	881	Open in IMG/M
3300014494\|Ga0182017_10123827	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1683	Open in IMG/M
3300014495\|Ga0182015_10778094	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	602	Open in IMG/M
3300014498\|Ga0182019_10315121	All Organisms → Viruses → Predicted Viral	1047	Open in IMG/M
3300014498\|Ga0182019_10431266	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	903	Open in IMG/M
3300014498\|Ga0182019_10954032	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	621	Open in IMG/M
3300014498\|Ga0182019_10989511	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	610	Open in IMG/M
3300014499\|Ga0182012_10008208	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	10337	Open in IMG/M
3300014502\|Ga0182021_12765911	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	589	Open in IMG/M
3300014502\|Ga0182021_13432993	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	527	Open in IMG/M
3300014655\|Ga0181516_10043058	All Organisms → cellular organisms → Bacteria	2288	Open in IMG/M
3300014655\|Ga0181516_10059221	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1932	Open in IMG/M
3300014838\|Ga0182030_10953313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	761	Open in IMG/M
3300014839\|Ga0182027_10349296	All Organisms → cellular organisms → Bacteria	1659	Open in IMG/M
3300014839\|Ga0182027_10401668	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300014839\|Ga0182027_10729192	All Organisms → cellular organisms → Bacteria	1046	Open in IMG/M
3300014839\|Ga0182027_11037205	All Organisms → cellular organisms → Bacteria	837	Open in IMG/M
3300014839\|Ga0182027_11231599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	751	Open in IMG/M
3300014839\|Ga0182027_11786595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	595	Open in IMG/M
3300016700\|Ga0181513_1299297	Not Available	1571	Open in IMG/M
3300017931\|Ga0187877_1056122	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1774	Open in IMG/M
3300017988\|Ga0181520_10001658	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	44706	Open in IMG/M
3300017988\|Ga0181520_10719335	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	680	Open in IMG/M
3300017998\|Ga0187870_1089907	Not Available	1206	Open in IMG/M
3300018005\|Ga0187878_1342012	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	529	Open in IMG/M
3300018042\|Ga0187871_10705751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	561	Open in IMG/M
3300018046\|Ga0187851_10112595	All Organisms → cellular organisms → Bacteria	1679	Open in IMG/M
3300018084\|Ga0184629_10522707	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	615	Open in IMG/M
3300019788\|Ga0182028_1093165	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1113	Open in IMG/M
3300020163\|Ga0194039_1015095	All Organisms → cellular organisms → Bacteria	3167	Open in IMG/M
3300021180\|Ga0210396_11734127	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	506	Open in IMG/M
3300021181\|Ga0210388_11076382	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	687	Open in IMG/M
3300021519\|Ga0194048_10138454	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	920	Open in IMG/M
3300023088\|Ga0224555_1013950	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula	4508	Open in IMG/M
3300023090\|Ga0224558_1181661	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	649	Open in IMG/M
3300025504\|Ga0208356_1016997	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1596	Open in IMG/M
3300025725\|Ga0209638_1183250	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	645	Open in IMG/M
3300025838\|Ga0208872_1069529	Not Available	1395	Open in IMG/M
3300025852\|Ga0209124_10250967	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	682	Open in IMG/M
3300025911\|Ga0207654_11142806	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	567	Open in IMG/M
3300025915\|Ga0207693_10452124	Not Available	1003	Open in IMG/M
3300025961\|Ga0207712_10988601	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	746	Open in IMG/M
3300027770\|Ga0209086_10002293	All Organisms → cellular organisms → Bacteria	14986	Open in IMG/M
3300028745\|Ga0302267_10004582	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15083	Open in IMG/M
3300028765\|Ga0302198_10144030	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1236	Open in IMG/M
3300028788\|Ga0302189_10325043	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	615	Open in IMG/M
3300028800\|Ga0265338_10459714	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	900	Open in IMG/M
3300029882\|Ga0311368_10357865	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1086	Open in IMG/M
3300029910\|Ga0311369_10752952	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	794	Open in IMG/M
3300029989\|Ga0311365_11121224	Not Available	678	Open in IMG/M
3300030004\|Ga0302186_10178146	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	740	Open in IMG/M
3300030916\|Ga0075386_11769100	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	542	Open in IMG/M
3300031521\|Ga0311364_11249747	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → Pedosphaera → Pedosphaera parvula → Pedosphaera parvula Ellin514	737	Open in IMG/M
3300031726\|Ga0302321_100622328	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1204	Open in IMG/M
3300031726\|Ga0302321_100785568	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	1073	Open in IMG/M
3300031726\|Ga0302321_101051135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	929	Open in IMG/M
3300032157\|Ga0315912_10237209	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1433	Open in IMG/M
3300032157\|Ga0315912_10628017	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	856	Open in IMG/M
3300032163\|Ga0315281_12288595	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	510	Open in IMG/M
3300032256\|Ga0315271_10837539	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	793	Open in IMG/M
3300032562\|Ga0316226_1002055	All Organisms → cellular organisms → Bacteria	19781	Open in IMG/M
3300032770\|Ga0335085_11992834	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → Verrucomicrobia subdivision 3 → unclassified Verrucomicrobia subdivision 3 → Verrucomicrobia subdivision 3 bacterium	589	Open in IMG/M
3300032783\|Ga0335079_11402057	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	694	Open in IMG/M
3300032828\|Ga0335080_10959618	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	873	Open in IMG/M
3300032893\|Ga0335069_12132607	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	588	Open in IMG/M
3300032898\|Ga0335072_10161603	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2726	Open in IMG/M
3300032898\|Ga0335072_11040580	Not Available	746	Open in IMG/M
3300034070\|Ga0334822_018119	All Organisms → cellular organisms → Bacteria	1632	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	92.79%
Host-Associated	Host-Associated	6.31%
Engineered	Engineered	0.90%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	59.46%
Aquatic	Environmental → Aquatic	33.33%
Plants	Host-Associated → Plants	6.31%
Solid Waste	Engineered → Solid Waste	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	46.85%
Freshwater	Environmental → Aquatic → Freshwater	24.32%
Peat	Environmental → Terrestrial → Peat	12.61%
Sediment	Environmental → Aquatic → Sediment	6.31%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.50%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.70%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.90%
Roots	Host-Associated → Plants → Roots	0.90%
Grass	Engineered → Solid Waste → Grass	0.90%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Terrestrial → Soil → Wetlands	23.42%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	21.62%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	13.51%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	12.61%
Lake	Environmental → Aquatic → Freshwater → Lake	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	6.31%
Lentic	Environmental → Aquatic → Freshwater → Lentic	3.60%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	2.70%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%
Composting	Engineered → Solid Waste → Grass → Composting	0.90%

Habitat	Taxonomy	Distribution
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	18.02%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	12.61%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	12.61%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	12.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	5.41%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	5.41%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	2.70%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	1.80%
Neutral	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Hypolimnion	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	13.51%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	8.11%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	7.21%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	5.41%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	5.41%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	4.50%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	3.60%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater	2.70%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.70%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	2.70%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	2.70%
Anoxic Zone Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Anoxic Zone Freshwater	1.80%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	1.80%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	1.80%
Hot Spring Fe-Si Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Neutral → Hot Spring Fe-Si Sediment	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	1.80%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lentic → Hypolimnion → Freshwater	0.90%
Freshwater Lake Hypolimnion	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake Hypolimnion	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.90%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.90%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Unclassified → Hot Spring Sediment	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.90%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.90%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459014	Litter degradation PV2	Engineered	Open in IMG/M
3300003892	Hot spring sediment microbial communities from Chocolate Pots, Yellowstone National Park, Wyoming that are Fe(III) reducing - CP Core 2, 1cm	Environmental	Open in IMG/M
3300004806	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005293	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1	Host-Associated	Open in IMG/M
3300005831	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.43_YBM	Environmental	Open in IMG/M
3300005836	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB	Environmental	Open in IMG/M
3300005993	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate 1 DNA2013-046	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006126	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH01Aug08	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009161	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG	Environmental	Open in IMG/M
3300009175	Freshwater lake bacterial and archeal communities from Alinen Mustajarvi, Finland, to study Microbial Dark Matter (Phase II) - Alinen Mustajarvi 5m metaG	Environmental	Open in IMG/M
3300009502	Freshwater microbial communities from Finland to study Microbial Dark Matter (Phase II) - AM7a DNA metaG	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010938	Sediment microbial community from Chocolate Pots hot springs, Yellowstone National Park, Wyoming, USA. Combined Assembly of Gp0156111, Gp0156114, Gp0156117	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300014161	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaG	Environmental	Open in IMG/M
3300014168	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaG	Environmental	Open in IMG/M
3300014200	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_30_metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014490	Permafrost microbial communities from Stordalen Mire, Sweden - 611E1M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300014494	Permafrost microbial communities from Stordalen Mire, Sweden - 712E3D metaG	Environmental	Open in IMG/M
3300014495	Permafrost microbial communities from Stordalen Mire, Sweden - 712P3M metaG	Environmental	Open in IMG/M
3300014498	Permafrost microbial communities from Stordalen Mire, Sweden - 812E2M metaG	Environmental	Open in IMG/M
3300014499	Permafrost microbial communities from Stordalen Mire, Sweden - 612S2S metaG	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014655	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_10_metaG	Environmental	Open in IMG/M
3300014838	Permafrost microbial communities from Stordalen Mire, Sweden - 812S3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300016700	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017931	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_100	Environmental	Open in IMG/M
3300017988	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaG	Environmental	Open in IMG/M
3300017998	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_150	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018042	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_10	Environmental	Open in IMG/M
3300018046	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10	Environmental	Open in IMG/M
3300018084	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32_b1	Environmental	Open in IMG/M
3300019788	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (PacBio error correction)	Environmental	Open in IMG/M
3300020163	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L227-8m	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021181	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O	Environmental	Open in IMG/M
3300021519	Anoxic zone freshwater microbial communities from boreal shield lake in IISD Experimental Lakes Area, Ontario, Canada - Jun2016-L222-5m	Environmental	Open in IMG/M
3300023088	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S2 30-34	Environmental	Open in IMG/M
3300023090	Peat soil microbial communities from Stordalen Mire, Sweden - 717 S3 20-24	Environmental	Open in IMG/M
3300025504	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-1 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300025725	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0002-211 (SPAdes)	Environmental	Open in IMG/M
3300025838	Freshwater microbial communities from Crystal Bog, Wisconsin, USA - CBH12Aug08 (SPAdes)	Environmental	Open in IMG/M
3300025852	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Incubations 011-22A (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027770	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_130207_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300028745	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_E1_3	Environmental	Open in IMG/M
3300028765	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_N2_2	Environmental	Open in IMG/M
3300028788	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E2_2	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029882	III_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300029910	III_Palsa_E2 coassembly	Environmental	Open in IMG/M
3300029989	III_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030004	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E1_1	Environmental	Open in IMG/M
3300030916	Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FA12 EcM (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300032562	Freshwater microbial communities from Trout Bog Lake, Wisconsin, USA - TBH18017	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032893	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.1	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300034070	Peat soil microbial communities from Stordalen Mire, Sweden - 713 E-3-M	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2PV_00999730	2170459014	Switchgrass, Maize And Mischanthus Litter	IRKLPFEGQYEVFEKLRDDFDPGLTLEQIAELDRRAERALAQPERCRPLDDVVADIEKRYRAKR
Ga0063012_100405236	3300003892	Hot Spring Sediment	VNAAQILEHVEKLPFEEQREVFERLRARFEDALTPEQSAELDRRAADALRHPGRGTPIEQVSAEIRQRLLTRK*
Ga0007854_101887561	3300004806	Freshwater	SSAQIQVLEQLDRLPFEEQREVFEQLRDKFDDMLTPEKIAELDRRAERALAHPERCRPLDEVVADLEKQFRAGR*
Ga0066673_108683102	3300005175	Soil	ICRLRANSAGVNYAMSATQVLEQVEKLPFEEQREVFEHLREKFDIALTPEQIAELDRRAEDALKHPGRGMPIEEVSAEIKKRLLAKK*
Ga0065715_107916551	3300005293	Miscanthus Rhizosphere	LDSMTATEFVEQFRKLPLGEQREVFRRIRGEFDDELTPEQITELDRRAEDALKNPGRGTAIEEVSLEIRKRLLAKK*
Ga0074471_102611612	3300005831	Sediment (Intertidal)	MSATQVMEQVDKLPFEEQREVFEHLREKFDDALTPEQIAELDRRADRALAHPERCRPLDDVVADIEKRFRAGR*
Ga0074470_107730063	3300005836	Sediment (Intertidal)	MSATQVLEQVEKLPFEEQREVFEHLREKFDDDLTSEQIAELDHRAERALAHPERCRPLDDVVADIEKRYRAKR*
Ga0074470_115600002	3300005836	Sediment (Intertidal)	MSTAQAKVLAQLNELPFEEQREVFAQLRDRFDDELTPEEIAELDCRAERALAHPERCRPLDDVVADIEKRFRAKG*
Ga0080027_101776412	3300005993	Prmafrost Soil	MEQIHELPFEEQYQVFARLRDEFDPELTPEQVAELERRAEDALKNPGRGKPVEQVFAEIEERLRAKK*
Ga0075029_1007893272	3300006052	Watersheds	MSAAQAQVLEQLDRLPFEEQREVFDHLRDKFDDALTPEQTAELDRRAERALAHPERCRPLDDVVADIEKRFRATR*
Ga0007855_11205932	3300006126	Freshwater	MSSAQIQVLEQLDRLPFEEQREVFEQLRDKFDDMLTPEQIAELDRRAERALAHPERCRSLDEVVADLEKEFRAGR*
Ga0075014_1003122922	3300006174	Watersheds	MSAAQAQVLEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLAKE*
Ga0066665_105366882	3300006796	Soil	MSATQVLEQVEKLPFEEQREVFEYLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0066659_111462431	3300006797	Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDDALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0066710_1045876442	3300009012	Grasslands Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0066709_1011586771	3300009137	Grasslands Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0099792_101503662	3300009143	Vadose Zone Soil	MEQVEKLPFEEQREVFEHLRENFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0114966_101209082	3300009161	Freshwater Lake	MEQIHKLPFEEQYEVFAHLRDEFDPELTPEQVAELERRAEDALKNPGRGKSVEQVFAEIEERLRAKK*
Ga0073936_107170802	3300009175	Freshwater Lake Hypolimnion	MSASQAQVLEQLDRLPFEEQREVFEQLRNRFDDELTPEQIAELERRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0114951_102038983	3300009502	Freshwater	MSSAQIQVLEQLDRLPFEEQREVFEQLRDKFDDMLTPEQIAELDRRAERALAHPERCRPLDEVVADLEKEFRAGR*
Ga0116128_11352141	3300009518	Peatland	MSAAQAQVLEQLDQLPFEEQREVFDHLRDKFDDALTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAKR*
Ga0105249_113656902	3300009553	Switchgrass Rhizosphere	GGMTATEFVEQFRKLPLGEQREVFRRIRGEFDDELTPEQITELDRRAEDALKNPGRGTAIEEVSGEIRKRLLAKK*
Ga0134125_127985782	3300010371	Terrestrial Soil	MSAAQAQVLAQLDRLPFEEQREVFEQLRDKFDDTLTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAAR*
Ga0134124_101022614	3300010397	Terrestrial Soil	MTATEFVEQFRKLPLGEQREVFRRIRGEFDDELTPEQITELDRRAEDALKNPGRGTAIEEVSVEIRKRLLAKK*
Ga0134124_105715971	3300010397	Terrestrial Soil	MSAAKAQVLKQLDRLSFEEQREVFEQLRGRFDDELTPEQIAELERRAKDALKHPGRGTPVEEVSAEIKERLLAKK*
Ga0137716_1000755712	3300010938	Hot Spring Fe-Si Sediment	LEHVEKLPFEEQREVFERLRARFEDALTPEQSAELDRRAADALRHPGRGTPIEQVSAEIRQRLLTRK*
Ga0137716_101160073	3300010938	Hot Spring Fe-Si Sediment	VNAAQILEHVNKLPIEEQREIFERLRDRFQDDLTPEQRTELERRAEDALRHSDRGTRVESVAAKVRQRLLAGK*
Ga0137383_106484192	3300012199	Vadose Zone Soil	MSATQILEQVEKLPFEEQREVFEHLREKFDDALTHEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0137382_105298202	3300012200	Vadose Zone Soil	MSAMQVLEQVEKLPFEEQREIFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0137381_100623294	3300012207	Vadose Zone Soil	MSATQILEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIGEVSAEIKKRLLARK*
Ga0137379_110096351	3300012209	Vadose Zone Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLHAKK*
Ga0137377_106834262	3300012211	Vadose Zone Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLARK*
Ga0137435_10945982	3300012232	Soil	MSATEVVEQFRKLPVAEQHKAFKKIREVFQDFDDELTPEQIAELDHRAERALAHPERCRPLDDVVADIEKRFRAKR*
Ga0137367_107582032	3300012353	Vadose Zone Soil	FEEQREVFEHLREKFDDALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0137384_104658042	3300012357	Vadose Zone Soil	MSATQVLEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLTKK*
Ga0137361_111424732	3300012362	Vadose Zone Soil	MRATQALEQVEKLPFEEQREVFEHLREKFDVALTPEQIAELDRRAEDALKHPGRGTPIGEVSAEIKKRLLAKK*
Ga0150984_1218414442	3300012469	Avena Fatua Rhizosphere	MSATQVLEQIHKLPFEEQYQVFARLCDEFDPELTPEQVAELERRAEDALKNPGRGKPVEQVFAEIEERLRTKK*
Ga0181529_1000232227	3300014161	Bog	MSAAQAQVLEQLARLPFEEQREVFDRLRDKFDEVLTPEQVAELDRRAERALAHPERCRPLADVVADIEKRFRATR*
Ga0181529_101231764	3300014161	Bog	MSATQVLEQLDKLPFEEQREVFEQLREKFEGELTPEQVAELDRRAERALAHPERCRPLDDALADIEKRFRAKQ*
Ga0181534_101508652	3300014168	Bog	MSAAQVLEQINKLTFEEQYQVFARLRDEFDPELTPEQVAELERRAEDALKNPGRGKPVEQVFSEIEERLRAKK*
Ga0181526_104377911	3300014200	Bog	EEQREVFDRLRDKFDEVLTPEQVAELDRRAERALAHPERCRPLADVVADIEKRFRATR*
Ga0163163_103878462	3300014325	Switchgrass Rhizosphere	MTATEFVEQFRKLPLGEQREVFRRIRGEFDDELTPEQITELDRRAEDALKNPGRGTAIEEVSLEIRKRLLAKK*
Ga0182010_105812491	3300014490	Fen	MSAAQVMEQVNKLPFEEQREVFEHLREKFDDVLTPEQIAELERRAEDALKNPGRGKPVEQVFAEIEERLLAKK*
Ga0182016_103544811	3300014493	Bog	MEQLEKLPFEAQREVFEQLRDKFDHALTPDQIAELDCRAERALAHPERCRPLDDVFADIEKRYRSRQ*
Ga0182017_101238273	3300014494	Fen	MSAAQAQVLEQLDRLPFEEQREVFEQLRGRFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAKR*
Ga0182015_107780941	3300014495	Palsa	NFSRYHALAKMFNGGKLNSMSAAQVVEQFCKLPFAEQHKAFEKIREVVRDFDDELTPEQIAELDRRAERALAHPELCRPLDEVVADIEKRFRAKR*
Ga0182019_103151212	3300014498	Fen	MSAAQAQVLEQLDRLPFEEQREVFEQLRGRFDDELTPEQIAELERRAEDALKHPGRGTPIEEVSAEIKKRLLAKK*
Ga0182019_104312662	3300014498	Fen	MSATQVLEQLDKLPFEEQREVFEQLREKFDSELTPEEIAELDRRAEHALAHPECCRPLDDVVADIEKRFRAKQ*
Ga0182019_109540322	3300014498	Fen	MSAAQAQVLEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLANE*
Ga0182019_109895112	3300014498	Fen	MSATQVLEQINKLPFEEQYEVFAHLRDEFDPELTPEQVAELERRAEDALKNPGRGKPVEQVFAEIEERLRAKK*
Ga0182012_100082089	3300014499	Bog	MEQVDKLPFEEQREVFEHLRDKFDDALTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRAKR*
Ga0182021_127659112	3300014502	Fen	MSAAQAQVLEQLDRLPFEEQREVFEQLRGRFDDELTPEQIAELDRRAEDALKHPGRGTPIEEVSVGVRQRLLAKE*
Ga0182021_134329932	3300014502	Fen	ERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLADE*
Ga0181516_100430586	3300014655	Bog	MSAAQVLAQLERLPFEEQREVFELLRDKFDGELMPEQAAELDRRAERALAHPERCRPLEDAIADLERRFHARQ*
Ga0181516_100592213	3300014655	Bog	MSAAQVLEQINKLTFEEQYQVFARLRDEFDPELTPEQVAELERRAEDALKNPGRGKPVEQVFAEIEERLRAKK*
Ga0182030_109533132	3300014838	Bog	MSAAHVLDLLEKLPEKEQREVFEQLRDKFDDELTSEQAAEVDRLAEDALKHPGCGKPIDQVFAEIEERLLARK*
Ga0182027_103492962	3300014839	Fen	MSATQVLEQVEKLSFEEQREVFEQLREKFDDELTPEQIAELDRRAERALAHPERCRPLENVIADIEKRFRAGQ*
Ga0182027_104016682	3300014839	Fen	MSATQVLEQLDKLPFEEQREVFEQLREKFDVELTPEQIAELDRRAERALAHPERCRPLEDAVADIEKRFRARQ*
Ga0182027_107291922	3300014839	Fen	MEQVNRLPFEEQREVFEQLREKFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRARR*
Ga0182027_110372053	3300014839	Fen	MSATQVMEQVNRLPFEEQREVFEQLREKFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAR
Ga0182027_112315991	3300014839	Fen	MSAAQAQVLEQLDRLPFEEQREVFDRLRNKFDGKLTPEEIAELDRRAERALAHPERCRPLDDVV
Ga0182027_117865951	3300014839	Fen	QVLAQLERLPLQEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLAPHPGLIPWQPIA*
Ga0181513_12992971	3300016700	Peatland	QAQVLEQLARLPFEEQREVFDRLRDKFDEVLTPEQVAELDRRAERALAHPERCRPLADVVADIEKRFRATR
Ga0187877_10561223	3300017931	Peatland	MSAAQAQVLEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLAKE
Ga0181520_1000165826	3300017988	Bog	MSAAQAQVLEQLARLPFEEQREVFDRLRDKFDEVLTPEQVAELDRRAERALAHPERCRPLADVVADIEKRFRATR
Ga0181520_107193352	3300017988	Bog	MSATQVLEQLDKLPFEEQREVFEQLREKFEGELTPEQVAELDRRAERALAHPERCRPLDDALADIEKRFRAKQ
Ga0187870_10899072	3300017998	Peatland	MSATQVLEQLDKLPFEEQREVFEQLREKFEGDLTLEQVAELDRRAERALAHPERCRPLDDVVADIEKRFRAKQ
Ga0187878_13420121	3300018005	Peatland	MSAAQAHVLEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIR
Ga0187871_107057512	3300018042	Peatland	MSAAQVLKQLDKLPFEEQRTVFEQLREKFGDELAPEQIAELDRRAERALAHPERCRPLDDVVADMEKRFRAKQ
Ga0187851_101125952	3300018046	Peatland	MSATQVLEQVNRLPFEEQREVFEHLREKFDDRLTPEQIVELDRRAERALAHPERCRPLDDVVADIEKRFRTTR
Ga0184629_105227072	3300018084	Groundwater Sediment	MSAAQVLEQVNKLPFEEQREVFEHLREKFDDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0182028_10931653	3300019788	Fen	MSATQVMEQVNRLPFEEQREVFEQLREKFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRARR
Ga0194039_10150954	3300020163	Anoxic Zone Freshwater	MSAAQAQVLEQLDRLPFEEQREVFEQLRDKFDDELTSEQIAELDRRAEDALKHPGRGTPIEEVSAAIRRRLLARK
Ga0210396_117341271	3300021180	Soil	MSAAQAQVLEQLDRLPFEEQREVFDHLRDKFDDTLTSEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRATR
Ga0210388_110763822	3300021181	Soil	MSAAQVLEQVNKLPFEEQREVFEQLRDRFDDELTPEQIAELDRRAARALAHPELCRPLDDVVADIEKQFRAKQ
Ga0194048_101384542	3300021519	Anoxic Zone Freshwater	MSATQVMEQIHKLPFEEQYEVFAHLRDEFDPELTPEQVAELERRAEDALKNPGRGKSVEQVFAEIEERLRAKK
Ga0224555_10139506	3300023088	Soil	MSATQILEQIHRLPLAEQYEVAAKVREEYFDDELTPEQIAELERRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0224558_11816612	3300023090	Soil	QIHRLPLAEQYEVAAKVREEYFDDELTPEQIAELERRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0208356_10169973	3300025504	Arctic Peat Soil	MSASQAQVLEQLDQLPFEEQREVFEQLRGKFNDDLTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRATR
Ga0209638_11832502	3300025725	Arctic Peat Soil	AQVLEQLDQLPFEEQREVFEQLRGKFDDELTPEQIAKLDRRAERALAHPERCRPLDDVVADIEKRFRATR
Ga0208872_10695292	3300025838	Freshwater	MSAAQIQVLEQLDRLPFEEQREVFEQLRDKFDDTLTPEQIAELDRRAERALAHPERCRPLDEVVAELEKQFRAGR
Ga0209124_102509672	3300025852	Arctic Peat Soil	MSAAQVVEQFCKLPFAEQHLAFEKIREVVRDFDDALTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRATR
Ga0207654_111428062	3300025911	Corn Rhizosphere	MSAAQAQVLAQLDRLPFEEQREVFEQLRDKFDDTLTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAAR
Ga0207693_104521242	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MSAAQAQVLAQLDRLPFEEQREVFEQLRDKFDETLTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAAR
Ga0207712_109886012	3300025961	Switchgrass Rhizosphere	VEQFRKLPLGEQREVFRRIRGEFDDELTSEQITELDRRAEDALKNPGRGTAIEEVSLEIRKRLLAKK
Ga0209086_1000229314	3300027770	Freshwater Lake	MEQIHKLPFEEQYEVFAHLRDEFDPELTPEQVAELERRAEDALKNPGRGKSVEQVFAEIEERLRAKK
Ga0302267_1000458213	3300028745	Bog	MSATQVMEQVDKLPFEEQREVFEHLRDKFDDALTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRAKR
Ga0302198_101440304	3300028765	Bog	MEQVDKLPFEEQREVFEHLRDKFDDALTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRAKR
Ga0302189_103250431	3300028788	Bog	MEQLEKLPFEAQREVFEQLRDKFDHALTPDQIAELDCRAERALAHPERCRPLDDVFADIEKRYRSRQ
Ga0265338_104597142	3300028800	Rhizosphere	MSASQAQVLEQLDQLPFEEQRAVFEQLRDRFDDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0311368_103578653	3300029882	Palsa	MSAAQVLEQLEKLPFEEQREVFEQLRGKFDDELTPEQIAELDRRAESALAHPERCRPLDDVFADIEKRYRAKQ
Ga0311369_107529521	3300029910	Palsa	LEQLEKLPFEEQREVFEQLRGKFDDELTPEQIAELDRRAESALAHPERCRPLDDVFADIEKRYRAKQ
Ga0311365_111212241	3300029989	Fen	MEQVNRLPFEEQREIFEHLREKFDDFDDTLTPEQIAELDRRAEDALKHPGRGTPIKEVSAEIKKRLLAKK
Ga0302186_101781463	3300030004	Bog	QVDKLPFEEQREVFEHLRDKFDDALTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRAKR
Ga0075386_117691002	3300030916	Soil	MSATQVLEQVEKLPFEEQREVFEQLREKFDDELAPEQIAELDRRAERALAHPERCRPLEDVMADIEKRFRARQ
Ga0311364_112497471	3300031521	Fen	MSATQVMEQVDKLPFEEQREVFEHLREKFDDALTPEQIAELDRRAERALTHPELCRPLDDVVADIEK
Ga0302321_1006223282	3300031726	Fen	MSAAQVMEQVNRLPFEEQREIFEHLREKFDDFDDTLTPEQIAELDRRAEDALKHPGRGTPIKEVSAEIKKRLLAKK
Ga0302321_1007855682	3300031726	Fen	MSATQVMEQVDKLPFEEQREVFEHLREKFDDALTPEQIAELDRRAERALTHPELCRPLDDVVADIEKRFRAVR
Ga0302321_1010511352	3300031726	Fen	MSAAQVLEQINKLPFEEQYEVFAHLRDEFDPKLTPEQVAELERRAEDALKNPGRGKPVEQVFAEIEERLRAKK
Ga0315912_102372092	3300032157	Soil	MSASEVVEQFRKLPAVEQREAFEKIREVIHDFDDELTPQQIAELDRRAEDALKNPGRGKPAEQVFAEIEEELRAKR
Ga0315912_106280172	3300032157	Soil	MSTAQAQVLAQLDRLPFEEQREVFEQLRGKFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRATR
Ga0315281_122885952	3300032163	Sediment	MSATQVMEQVNRLPFEEQREVFEQLREKFDDKLTPEQIAELDRRAERALAHPELCRPLDDVVADIEKRFRNR
Ga0315271_108375391	3300032256	Sediment	MSATQVMEQVNKLPFAEQREVFERLRDKFDDELTPEQIAELDRRAERALAQPELCRPLDDVVADIEKQFRDRK
Ga0316226_10020552	3300032562	Freshwater	MSATQVMEQIHKLPFEEQYEVFAHLRDEFDPELTAEQVAELERRAEDALKNPGRGKPVEQVFAEIEGRLRAKK
Ga0335085_119928342	3300032770	Soil	MSAAQVLEQVNKLPFEEQREVFEKLRNRFDDALTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRATR
Ga0335079_114020572	3300032783	Soil	MSAAQALVLEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALKHPGRGTPIEEVSAGIRQRLLAKE
Ga0335080_109596182	3300032828	Soil	MSAAQAQVLEQLDRLPFAEQREVFEQLRDRFDDELTPQQVAELERRAVDALKHPGRGTPIEEVSAEIKKRLLAKK
Ga0335069_121326071	3300032893	Soil	MSEAQAQVSEQLERLPFEEQREVFEQLRDKFGDELTPEQIAELDRRAEDALRHPGRGTPIEEVSTGRETTDTGPCG
Ga0335072_101616034	3300032898	Soil	MSAAQVLEQVEKLPFEEQREVFEHLREKFDDLTPEQIAELDRRAEDALKNPGRGKPVEQVFAEIEERLRARK
Ga0335072_110405801	3300032898	Soil	MSATQVLEEIRKLPFNEQYEVFEQLREDFDPELTPEQVAELERRAEDALKHPGRGKPVDQVFTEIEARLRAKK
Ga0334822_018119_3_209	3300034070	Soil	VLEQLDRLPFEEQREVFEQLRGRFDDELTPEQIAELDRRAERALAHPERCRPLDDVVADIEKRFRAKR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086031

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences