Metagenome Family F086022

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F086022
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	75 residues
Representative Sequence	LLRIAKAVEETRSEIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVRDRAFADAAARLFQKVRTQLK
Number of Associated Samples	67
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	4.50 %
% of genes near scaffold ends (potentially truncated)	91.89 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	62
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (66.667 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (30.631 % of family members)
Environment Ontology (ENVO)	Unclassified (52.252 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (59.459 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.96% β-sheet: 0.00% Coil/Unstructured: 48.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.45
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02735	Ku	7.21
PF00982	Glyco_transf_20	1.80
PF06897	DUF1269	0.90
PF04392	ABC_sub_bind	0.90
PF07045	DUF1330	0.90
PF04986	Y2_Tnp	0.90
PF00575	S1	0.90
PF00012	HSP70	0.90
PF01527	HTH_Tnp_1	0.90
PF00211	Guanylate_cyc	0.90
PF00872	Transposase_mut	0.90
PF00903	Glyoxalase	0.90
PF12531	DUF3731	0.90
PF00144	Beta-lactamase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1273	Non-homologous end joining protein Ku, dsDNA break repair	Replication, recombination and repair [L]	7.21
COG0380	Trehalose-6-phosphate synthase, GT20 family	Carbohydrate transport and metabolism [G]	1.80
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	0.90
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	0.90
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	0.90
COG2367	Beta-lactamase class A	Defense mechanisms [V]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.90
COG4803	Uncharacterized membrane protein	Function unknown [S]	0.90
COG5470	Uncharacterized conserved protein, DUF1330 family	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
All Organisms	root	All Organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
cellular organisms	root	All Organisms → cellular organisms	33.33 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.43 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	24.32 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	23.42 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	20.72 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1.80 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	0.90 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
unclassified Rhodospirillales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales	0.90 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.90 %
Sphingosinicellaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %
Tracheophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Euphyllophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Spermatophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Magnoliopsida	class	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Mesangiospermae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
eudicotyledons	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Gunneridae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Pentapetalae	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Caryophyllales	order	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Amaranthaceae	family	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.67 %
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	20.72 %
Bosea	genus	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	0.90 %
Rhodospirillales bacterium URHD0017	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	0.90 %
Polymorphobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001867\|JGI12627J18819_10382187	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	571	Open in IMG/M
3300003368\|JGI26340J50214_10114790	Not Available	685	Open in IMG/M
3300005332\|Ga0066388_105835922	Not Available	622	Open in IMG/M
3300005436\|Ga0070713_100888183	Not Available	857	Open in IMG/M
3300005436\|Ga0070713_102168036	Not Available	538	Open in IMG/M
3300005467\|Ga0070706_100453156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → unclassified Rhodospirillales → Rhodospirillales bacterium URHD0017	1194	Open in IMG/M
3300005468\|Ga0070707_101168533	Not Available	736	Open in IMG/M
3300005471\|Ga0070698_101207666	Not Available	705	Open in IMG/M
3300005764\|Ga0066903_102198732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1064	Open in IMG/M
3300005764\|Ga0066903_103948688	Not Available	796	Open in IMG/M
3300005764\|Ga0066903_103979311	Not Available	792	Open in IMG/M
3300005764\|Ga0066903_106473156	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	610	Open in IMG/M
3300006041\|Ga0075023_100083144	Not Available	1075	Open in IMG/M
3300006174\|Ga0075014_100777388	Not Available	564	Open in IMG/M
3300009792\|Ga0126374_11625705	Not Available	535	Open in IMG/M
3300010046\|Ga0126384_10752715	Not Available	868	Open in IMG/M
3300010048\|Ga0126373_10150319	Not Available	2212	Open in IMG/M
3300010048\|Ga0126373_11177072	Not Available	833	Open in IMG/M
3300010048\|Ga0126373_11975847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	646	Open in IMG/M
3300010048\|Ga0126373_12566585	Not Available	568	Open in IMG/M
3300010048\|Ga0126373_12580952	All Organisms → cellular organisms → Bacteria	566	Open in IMG/M
3300010048\|Ga0126373_13012167	Not Available	525	Open in IMG/M
3300010358\|Ga0126370_10007569	All Organisms → cellular organisms → Bacteria	5610	Open in IMG/M
3300010358\|Ga0126370_10096306	Not Available	2034	Open in IMG/M
3300010358\|Ga0126370_10117689	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingosinicellaceae → Polymorphobacter	1877	Open in IMG/M
3300010358\|Ga0126370_11871923	Not Available	583	Open in IMG/M
3300010359\|Ga0126376_10421751	Not Available	1209	Open in IMG/M
3300010360\|Ga0126372_10594193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1061	Open in IMG/M
3300010360\|Ga0126372_10897786	All Organisms → cellular organisms → Bacteria	888	Open in IMG/M
3300010361\|Ga0126378_11368863	Not Available	801	Open in IMG/M
3300010366\|Ga0126379_10523513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	1261	Open in IMG/M
3300010366\|Ga0126379_10653981	Not Available	1141	Open in IMG/M
3300010366\|Ga0126379_11725399	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	731	Open in IMG/M
3300010366\|Ga0126379_11986605	Not Available	684	Open in IMG/M
3300010366\|Ga0126379_12109514	All Organisms → cellular organisms → Bacteria	665	Open in IMG/M
3300010366\|Ga0126379_12791910	Not Available	584	Open in IMG/M
3300010366\|Ga0126379_12858965	Not Available	578	Open in IMG/M
3300010376\|Ga0126381_102508512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	739	Open in IMG/M
3300010376\|Ga0126381_104052631	Not Available	570	Open in IMG/M
3300010398\|Ga0126383_10096719	All Organisms → cellular organisms → Bacteria	2626	Open in IMG/M
3300010398\|Ga0126383_10157085	Not Available	2130	Open in IMG/M
3300010398\|Ga0126383_13492421	Not Available	513	Open in IMG/M
3300012971\|Ga0126369_11538823	Not Available	755	Open in IMG/M
3300012971\|Ga0126369_11606884	Not Available	740	Open in IMG/M
3300016270\|Ga0182036_10434014	Not Available	1030	Open in IMG/M
3300016270\|Ga0182036_10704285	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	817	Open in IMG/M
3300016294\|Ga0182041_11425212	Not Available	636	Open in IMG/M
3300016319\|Ga0182033_10477693	Not Available	1067	Open in IMG/M
3300016319\|Ga0182033_11559452	Not Available	597	Open in IMG/M
3300016357\|Ga0182032_10165107	All Organisms → cellular organisms → Bacteria	1652	Open in IMG/M
3300016357\|Ga0182032_11071952	Not Available	690	Open in IMG/M
3300016357\|Ga0182032_11656769	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	557	Open in IMG/M
3300016371\|Ga0182034_10442000	All Organisms → cellular organisms → Bacteria → Proteobacteria	1075	Open in IMG/M
3300016371\|Ga0182034_11480834	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	594	Open in IMG/M
3300016422\|Ga0182039_10914512	All Organisms → cellular organisms → Bacteria	784	Open in IMG/M
3300016422\|Ga0182039_11152427	Not Available	699	Open in IMG/M
3300016445\|Ga0182038_10487157	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1050	Open in IMG/M
3300016445\|Ga0182038_11406352	Not Available	625	Open in IMG/M
3300016445\|Ga0182038_11663958	Not Available	575	Open in IMG/M
3300016445\|Ga0182038_11983524	Not Available	527	Open in IMG/M
3300021560\|Ga0126371_10219870	Not Available	2003	Open in IMG/M
3300021560\|Ga0126371_13389769	Not Available	538	Open in IMG/M
3300025928\|Ga0207700_10516387	Not Available	1058	Open in IMG/M
3300025928\|Ga0207700_10719581	Not Available	892	Open in IMG/M
3300027812\|Ga0209656_10267757	Not Available	801	Open in IMG/M
3300027874\|Ga0209465_10110796	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta → Tracheophyta → Euphyllophyta → Spermatophyta → Magnoliopsida → Mesangiospermae → eudicotyledons → Gunneridae → Pentapetalae → Caryophyllales → Amaranthaceae → Bosea	1350	Open in IMG/M
3300027874\|Ga0209465_10126366	Not Available	1263	Open in IMG/M
3300031122\|Ga0170822_13453534	Not Available	648	Open in IMG/M
3300031545\|Ga0318541_10514886	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	669	Open in IMG/M
3300031546\|Ga0318538_10326769	Not Available	827	Open in IMG/M
3300031564\|Ga0318573_10587776	Not Available	599	Open in IMG/M
3300031573\|Ga0310915_10432614	Not Available	935	Open in IMG/M
3300031668\|Ga0318542_10312797	Not Available	805	Open in IMG/M
3300031680\|Ga0318574_10037581	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2487	Open in IMG/M
3300031719\|Ga0306917_11030383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300031719\|Ga0306917_11400807	Not Available	539	Open in IMG/M
3300031736\|Ga0318501_10511793	Not Available	655	Open in IMG/M
3300031736\|Ga0318501_10710904	Not Available	554	Open in IMG/M
3300031744\|Ga0306918_10780274	Not Available	746	Open in IMG/M
3300031744\|Ga0306918_10782437	Not Available	745	Open in IMG/M
3300031771\|Ga0318546_10403714	Not Available	954	Open in IMG/M
3300031782\|Ga0318552_10559231	Not Available	584	Open in IMG/M
3300031793\|Ga0318548_10219562	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	934	Open in IMG/M
3300031794\|Ga0318503_10121822	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	835	Open in IMG/M
3300031795\|Ga0318557_10265262	Not Available	787	Open in IMG/M
3300031797\|Ga0318550_10272748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	821	Open in IMG/M
3300031805\|Ga0318497_10755077	Not Available	545	Open in IMG/M
3300031833\|Ga0310917_10195501	Not Available	1351	Open in IMG/M
3300031833\|Ga0310917_10861638	Not Available	610	Open in IMG/M
3300031897\|Ga0318520_10491457	Not Available	757	Open in IMG/M
3300031941\|Ga0310912_11211587	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300031942\|Ga0310916_10939861	Not Available	723	Open in IMG/M
3300031945\|Ga0310913_10841115	Not Available	646	Open in IMG/M
3300031945\|Ga0310913_10884929	Not Available	628	Open in IMG/M
3300031946\|Ga0310910_10920254	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	685	Open in IMG/M
3300031946\|Ga0310910_11069685	Not Available	629	Open in IMG/M
3300031954\|Ga0306926_10159969	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	2790	Open in IMG/M
3300031954\|Ga0306926_10259023	All Organisms → cellular organisms → Bacteria	2155	Open in IMG/M
3300031959\|Ga0318530_10135817	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	994	Open in IMG/M
3300031959\|Ga0318530_10263345	Not Available	711	Open in IMG/M
3300032001\|Ga0306922_10109676	All Organisms → cellular organisms → Bacteria	2927	Open in IMG/M
3300032010\|Ga0318569_10470113	Not Available	586	Open in IMG/M
3300032039\|Ga0318559_10220079	Not Available	875	Open in IMG/M
3300032054\|Ga0318570_10531748	Not Available	536	Open in IMG/M
3300032059\|Ga0318533_10244146	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1295	Open in IMG/M
3300032059\|Ga0318533_11252258	Not Available	542	Open in IMG/M
3300032063\|Ga0318504_10577947	Not Available	539	Open in IMG/M
3300032064\|Ga0318510_10462105	Not Available	546	Open in IMG/M
3300032094\|Ga0318540_10095188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1396	Open in IMG/M
3300032205\|Ga0307472_101254780	Not Available	711	Open in IMG/M
3300032261\|Ga0306920_100484499	Not Available	1836	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.40%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.40%
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Sediment	Environmental → Aquatic → Sediment	1.80%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	82.88%
Loam	Environmental → Terrestrial → Soil → Loam	13.51%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	54.05%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.83%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.21%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	6.31%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	30.63%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	28.83%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	21.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	6.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300003368	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300027812	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM2 (SPAdes)	Environmental	Open in IMG/M
3300027874	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031122	Oak Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031959	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f24	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032039	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21	Environmental	Open in IMG/M
3300032054	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032064	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12627J18819_103821871	3300001867	Forest Soil	LHIAKAVDEARREIDVQTLQHLIDPEHRTDAGDWVRFWEDRGFSGDSEPSDVSDRAFVDAAARLFLKVRTQLS*
JGI26340J50214_101147902	3300003368	Bog Forest Soil	VRKEWAKEDAEYGELLRIAKTVDEARREIDVQTLQDLFDPEHKMNGGDWVSFWEDRGFSGDSEPSDVWVRAFADGAARLFQKLRSQL*
Ga0066388_1058359221	3300005332	Tropical Forest Soil	LLRIAKAVEEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSDGSEPSDAWDRALADGAARLFQKVRSQL*
Ga0070713_1008881832	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	WAKEDPKYRQLRIAKAVEEARREIDLKTLQALIDPEHKMDAGDWVRFWEDRGFSGVSEPSDGWARAFADGAAKAPPENREARHLRPLNS*
Ga0070713_1021680361	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	VEEARREIDVQTLQDLIDPEHKMDAGDWVRFWQDRGFSGVSEPSDVWVRAFADGAARLFQKARKHVI*
Ga0070706_1004531561	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	LLRIAKAVEEARGEIDVQTLQDLIDPEHNMDAGDWVRFWEDRGFSGDCQPSDVWDRALGGGAARLFQKARKHVI*
Ga0070707_1011685332	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	QLLRIAKAVEEARREIDVQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSEPSDLWVRAFADGAARLFQKARKHVIWGRSRRPP*
Ga0070698_1012076661	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	DWVKEDADQLLRIAKAVEEARREIDVQTLQDLIDPEHKMDTGDWVRFWQDRGFSCDSEPSDVWVRAFADGAARLFQKARKHVI*
Ga0066903_1021987321	3300005764	Tropical Forest Soil	GLEVAAEWAKEDDKYRALLRIAKAVDEARRAIDVQTLQHLIDPEHRTDACDWVRFWEDRGFSGDSEPSDVSDRAFADAAARLFHKVRTQLS*
Ga0066903_1039486881	3300005764	Tropical Forest Soil	ELLRIAKAVEEVRREIDLQTLQDLIDPQHKMDAGDWVTFWEDRGFSGDCEPSDGCDRAFADRAVRLFQKATKHVI*
Ga0066903_1039793111	3300005764	Tropical Forest Soil	RRYVKTEQWATEGAKYSELLRIAKAVEEVRREIDLQTLQDLIDPEHKMDPGDWVRFWEDRGFSGDSESSDVWARAFADGAARLFQRVRNQL*
Ga0066903_1064731561	3300005764	Tropical Forest Soil	RIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDASDRAFADAAARLFHKVRTQLS*
Ga0075023_1000831441	3300006041	Watersheds	KWAKEDDKYRALLRIAKAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL*
Ga0075014_1007773881	3300006174	Watersheds	DKYRALLRTAKAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL*
Ga0126374_116257051	3300009792	Tropical Forest Soil	YVKTEQWATEGAKYSELLRIAKAVEEVRREIDLQTLQDLIDPEHKMDPGDWVRFWEDRGFSGDSESSDVWARAFADGAARLFQRVRNQL*
Ga0126384_107527152	3300010046	Tropical Forest Soil	LLRIAKAVDEARREIDVQTLQHLIDPEHRMNAGDWVRFWEDRGFSGASEPSDVRDRALADAATRFFQKFRTRLQ*
Ga0126373_101503194	3300010048	Tropical Forest Soil	WATEDAKYGELLRIAKAVEEARREIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARFFQMVRSQL*
Ga0126373_111770722	3300010048	Tropical Forest Soil	EEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSDSSDVWARAFADGAARLFQKVRSQL*
Ga0126373_119758471	3300010048	Tropical Forest Soil	WAKEDDKYRTLLHIAKAVDEARREIDVQTLQHLIDPEHRTDACDWVRFWEDRGFSGDSEPSDVSDRAFADAAARLFHKVRTQLS*
Ga0126373_125665852	3300010048	Tropical Forest Soil	ATEAAKYGELLRIAKAVEEARREIDVQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDAFPDGAARLVQKVRSQR*
Ga0126373_125809522	3300010048	Tropical Forest Soil	YNELLRIAKAMDEARREIDLQTLQDLIDPKHKMNGADWVSFWEDRGFSGDSEPSDVWVRAFADCAAKVMQKARGQL*
Ga0126373_130121671	3300010048	Tropical Forest Soil	RKWAKEDDKYRALLRIAKAVEEARREIDVQTLQHLMDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSARAFADAAAGLFQKGRTQLS*
Ga0126370_100075691	3300010358	Tropical Forest Soil	EEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARLFQKVRSQL*
Ga0126370_100963063	3300010358	Tropical Forest Soil	REIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARFFQMVRSQL*
Ga0126370_101176891	3300010358	Tropical Forest Soil	EEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSESSDVWARAFADGAARLFQRVRNQL*
Ga0126370_118719231	3300010358	Tropical Forest Soil	QSYVKTEQWATEDAKYGELLRIAKAVEEVRREIDLQSLQDLIDPEHKMDAGDWVSFWEDRGFSGDSEPSDVWARAFADSAARLFQKVRSQL*
Ga0126376_104217513	3300010359	Tropical Forest Soil	RREIDLQTLQDLIDPEHKMDAGDWVRFCEDRGFSGDSESNDVWARAFADGAARLFQKVRSQP*
Ga0126372_105941932	3300010360	Tropical Forest Soil	DVQTLQHLIDPEHRTDACDWVRFWEDRGFSGDSEPSDVSDRAFADAAARLFHKVRTQLS*
Ga0126372_108977861	3300010360	Tropical Forest Soil	AKAVDEARREIDLQTLQDLIDPEHQMNGADWVSFWEDRGFSGDTDVWVRAFADRAAKVLQKARGQL*
Ga0126378_113688631	3300010361	Tropical Forest Soil	RREIEAQALQDLIDPEHKMDVGDWARFWEDRGFSGASEPNDVWDKAFADCTARLFRKPRRQL*
Ga0126379_105235133	3300010366	Tropical Forest Soil	IAKAVDEARREIDLQPLQDLIDPEHKMDEADWVSFWEARGFSGDSEASDVWVRAFADRAAKILKARGQL*
Ga0126379_106539811	3300010366	Tropical Forest Soil	AKAVEEARREIDVQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDAFPDGAARLVQKVRSQR
Ga0126379_117253991	3300010366	Tropical Forest Soil	EARREIDVQTLQHLIDPEHRTDACDWVRFWEDRGFSGDSEPSDVSDRAFADAAARLFHKVRTQLS*
Ga0126379_119866051	3300010366	Tropical Forest Soil	RREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSDGSEPSDVWARAFADSAARLLQKRFGL*
Ga0126379_121095143	3300010366	Tropical Forest Soil	EYCELLRIANAVEAARREIDIQALQDLIDPEHKMDVGDWARFWEDRGFSGASEPNDVWDKAFADCTVKLPRFRGHRTIWV*
Ga0126379_127919101	3300010366	Tropical Forest Soil	WATEDAKYGELLRIAKAVEEARREIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDPEPSDVWARAFADGAARFFQMVRSQL*
Ga0126379_128589651	3300010366	Tropical Forest Soil	AKAVEEARREIDMQTLQDLVGPEHKLDADDWARFWENRGFSGASEPSNARDRAFADGAARSFQKVRSQL*
Ga0126381_1025085122	3300010376	Tropical Forest Soil	ARADQAARKEIDVQTLQHLIDPAHRMNAGDWVRFWEDRGFSGASEPSDVRDRALADAAARFFQKFRTRLQ*
Ga0126381_1040526311	3300010376	Tropical Forest Soil	LEVGEWATEDAKYGELLRIAKAVEEARREIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARFFQMVRSQL*
Ga0126383_100967191	3300010398	Tropical Forest Soil	VEEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSESNDVWARAFADGAARLFQKVRSQP*
Ga0126383_101570854	3300010398	Tropical Forest Soil	EWATEDAKYGELLRIAKAVEEARREIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARFFQMVRSQL*
Ga0126383_134924211	3300010398	Tropical Forest Soil	KEDDKYRALLRIAKAVDEARREIDVQTLQHLIDPEHRTDAGDGVRFWEDRGFSGDPEPSDVKDRAFADAAARLFHKVRTQLS*
Ga0126369_115388231	3300012971	Tropical Forest Soil	ESGLEVGEWAMEAAKYGELLRIAKAVEEVRREIDVQTLQDLIDPERKMDAGDWVTFWEDRGFSGDCEPSDGWDRAFADRAVRLFQKATKHVI*
Ga0126369_116068841	3300012971	Tropical Forest Soil	LLRIANVVEAARREIDIQEALQDLIDPEHKMGVGDWVRFWEDRGFSDAPEPNDVWDKAFADRAAGLFRKPRRQL*
Ga0182036_104340141	3300016270	Soil	KEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0182036_107042851	3300016270	Soil	AVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDARDRAFADAAARLF
Ga0182041_114252122	3300016294	Soil	GLEFGEERGTELAKYSALLRIPSAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0182033_104776931	3300016319	Soil	EVRREIEAQGLQDLIDPEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0182033_115594521	3300016319	Soil	GPEVAAEWAKEDDKYRALLRIAKAVEEARKEIDVQTLQHLIDPEHKMDAGDWVRFWEDRGFSGDCEPSDVSDRAFADAAARLFQKVRTQL
Ga0182032_101651073	3300016357	Soil	PTAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEDRGFSGASESKDVWDKAFADWAAGLFQNPRRQL
Ga0182032_110719523	3300016357	Soil	TAMEEVRREIEAQGLQDLIDPEHKMDAGDWGRFWEDRGFSDASEPNDVWDKAFADCAARLFQKPRRQP
Ga0182032_116567691	3300016357	Soil	RREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0182034_104420001	3300016371	Soil	MQRCPALLRIAKAVEEVRREIDVQTLQQLIDPEHRMDAGDLDRGFYGDSEPSDVSARAFADAAAGLFKKIRTQP
Ga0182034_114808341	3300016371	Soil	AVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0182039_109145121	3300016422	Soil	GEECGTDDVEYCALLRIASAVDEVRREIDAQGLQDLIDPEHKMDAGDWGRFWEDRGFSDASEPNDVWDKAFADCAARLFQKPRRQP
Ga0182039_111524271	3300016422	Soil	RREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0182038_104871571	3300016445	Soil	KEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0182038_114063521	3300016445	Soil	CALLRIASAVDEVRREIDAQGLQDLIDPEHKMDAGDWGRFWEDRGFSDASEPNDVWDKAFADCAARLFQKPRRQP
Ga0182038_116639581	3300016445	Soil	KAVEEARREIDVQTLQHLIDPEHRMDASDWVRFWEDRGFSGDSEPSDVSDRAFADAAARLFQKVRTQLS
Ga0182038_119835241	3300016445	Soil	AMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEDRGFSGASESKDVWDKAFADWAAGLFQNPRRQL
Ga0126371_102198703	3300021560	Tropical Forest Soil	AKYGELLRIAKAVEEARREIDVQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDAFPDGAARLVQKVRSQR
Ga0126371_133897691	3300021560	Tropical Forest Soil	GDLLRIAKAVEEARREIDLQTLQDLIDPEHKMDAGDWVRFCEDRGFSGDSESNDVWARAFADGAARLFQKVRSQP
Ga0207700_105163871	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EDADQLLRIAKAVEEARREIDVQTLQDLIDPEHKMDAGDWVRFWQDRGFSGVSEPSDVWVRAFADGAARLFQKARKHVI
Ga0207700_107195812	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	EWAKEDPKYRQLRIAKAVEEARREIDLKTLQALIDPEHKMDAGDWVRFWEDRGFSGVSEPSDGWARAFADGAAKAPPENREARHLRPLNS
Ga0209656_102677571	3300027812	Bog Forest Soil	GLLPREEVRREIDVQTLQDLIDPEHKMDPGDWGSFWEDRGFSGDAEPSDVWVRAFADGAAKLFQKVRSQL
Ga0209465_101107963	3300027874	Tropical Forest Soil	TEDAKYGELLRIAKAVEEARREIDLQTLQDLIDPEHKMDAGDWVRFWEDRGFSGDSDSSDVWARAFADGAARLFQKVRSQL
Ga0209465_101263663	3300027874	Tropical Forest Soil	TEDAKYGELLRIAKAVEEARREIDLQTLQDLIGPEHKMDAGDWVRFWEDRGFSGDSEPSDVWARAFADGAARFFQMVRSQL
Ga0170822_134535341	3300031122	Forest Soil	AKYGELLRIAKTVEEARREIDIQTLQDLIDPELKMDPGDWGSFWEDRGFSGDAEPSDVWGRAFADGAAKLFQKVRSRP
Ga0318541_105148862	3300031545	Soil	VAAKWVKEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0318538_103267691	3300031546	Soil	VEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL
Ga0318573_105877761	3300031564	Soil	GLEVAAEWAKEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0310915_104326141	3300031573	Soil	ALLRIPSAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEDRGFSGASESKDVWDKAFADWAAGLFQNPRRQL
Ga0318542_103127971	3300031668	Soil	EDDKYRALLRIAKAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSSDSEPSDVSDRAFADSAAGLFQKGRTRLS
Ga0318574_100375811	3300031680	Soil	DKYGALLRIAKAVEEARREIDVQSLQHLIDPEHRMDAGDWVRFWQDRGFSGDSEPSDVRDRAFADAAARLFQKVRTQL
Ga0306917_110303831	3300031719	Soil	YRALLRIAKAVEETRSEIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDARDRAFADAAARLF
Ga0306917_114008071	3300031719	Soil	WAKEDDKYRALLRIAQAVEETRREIDVQTLQQLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVSARAFADAAAGLFKKIRTQL
Ga0318501_105117933	3300031736	Soil	MEEVRREIEAQGLQDLIDPEHKMDADDWARFWEDRGFSGASESKDVWDKAFADWAAGLFQNPRRQL
Ga0318501_107109042	3300031736	Soil	LLRIAKAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL
Ga0306918_107802742	3300031744	Soil	GTELAKYSALLRIPSAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0306918_107824371	3300031744	Soil	EARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL
Ga0318546_104037142	3300031771	Soil	VRREIEAQGLQDLIDLEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKHR
Ga0318552_105592311	3300031782	Soil	LLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVRDRTFADAA
Ga0318548_102195622	3300031793	Soil	LQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0318503_101218222	3300031794	Soil	ETRSEIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDARDRAFADAAARLF
Ga0318557_102652621	3300031795	Soil	EWAKEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0318550_102727481	3300031797	Soil	LLRIAKAVEETRSEIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVRDRAFADAAARLFQKVRTQLK
Ga0318497_107550772	3300031805	Soil	EYCALLRIASAVDEVRREIDAQGLQDLIDPEHKMDAGDWGRFWEDRGFSDASEPNDVWDKAFADCAARLFQKPRRQP
Ga0310917_101955011	3300031833	Soil	KAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVGDRAFADSAAGLFQKGRTQL
Ga0310917_108616381	3300031833	Soil	AEWAKEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0318520_104914571	3300031897	Soil	EDDKYRALLRIAKAVEEARREIDVQTLQHLMDPEHRLDAGDWVRFWEDRGFSSDSEPSDVSDRAFADSAAGLFQKGRTRLS
Ga0310912_112115871	3300031941	Soil	EIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQL
Ga0310916_109398612	3300031942	Soil	LEFGEERGTELAKYSALLRIPSAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0310913_108411152	3300031945	Soil	EEVRREIEAQGLQDLIDLEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0310913_108849291	3300031945	Soil	REIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0310910_109202542	3300031946	Soil	LLRVAKVVEEARKEIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVRDRAFADAAARLFQKVRTQLK
Ga0310910_110696851	3300031946	Soil	HPQVARKWAKEDDKYRALLRIAKAVEEVRREIDVQTLQQLIDAEHRMDAGDWVRFWEDRGFGGDSEPSDVSARAFADAAAGLFKKIRTQP
Ga0306926_101599694	3300031954	Soil	IDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0306926_102590231	3300031954	Soil	LWTKHPQVARKWAKEDDKYRALLRIAKAVEEVRREIDVQTLQQLIDAEHRMDAGDWVRFWEDRGFGGDSEPSDVSARAFADAAAGLFKKIRTQP
Ga0318530_101358171	3300031959	Soil	VEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVRDRAFADAAARLFQKVRTQLK
Ga0318530_102633451	3300031959	Soil	ARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLL
Ga0306922_101096762	3300032001	Soil	LTLWTKHPQVARKWAKEDDKYRALLRIAKAVEEVRREIDVQTLQQLIDAEHRMDAGDWVRFWEDRGFGGDSEPSDVSARAFADAAAGLFKKIRTQP
Ga0318569_104701131	3300032010	Soil	EIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQL
Ga0318559_102200791	3300032039	Soil	ARREIDVQTLQHLIDPEHRMDAGDWVKFWEDRGFSGDSEPSDMSDRAFADAAARLFQKVRTQLS
Ga0318570_105317481	3300032054	Soil	EIEAQGLQDLIDLEHKMDADDWARFWEERGFSGASESNDVWDKAFADWAAGLFQKPRRQL
Ga0318533_102441462	3300032059	Soil	LLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDVSAKAFADAAAGLFKKIRTQL
Ga0318533_112522581	3300032059	Soil	KWAKEDDKYRALLRIAKAVEEARREIDVQTLQHLMDPEHRLDAGDWVRFWEDRGFSSDSEPSDVSDRAFADSAAGLFQKGRTRLS
Ga0318504_105779472	3300032063	Soil	YSALLRIPSAMEEVRREIEAQGLQDLIDPEHKMDADDWARFWEDRGFSGASESKDVWDKAFADWAAGLFQNPRRQL
Ga0318510_104621051	3300032064	Soil	RIAKAVEEARREIDVQTLQHVIDPEHRLDAGDWVRFWEDRGFSGDSEPSDVSDRAFADSAAGLFQKGRTQL
Ga0318540_100951881	3300032094	Soil	GLEVAAKWVKEDDKYRALLRIAKAVEEARREIDVQTLQHLIDPEHRMDAGDWVRFWEDRGFSGDSEPSDLRDRAFTDAAARLFQKVRTQLQ
Ga0307472_1012547801	3300032205	Hardwood Forest Soil	EWAKEAAKYGELLRIAKTVEEARREIDIQTLQDLIDPELKMDPGDWDSFWEDRGFSGDAEPSDVWVRAFADGAAKLFQKVRSQL
Ga0306920_1004844992	3300032261	Soil	VLRIAKAVEEVRREIDVQTLQDLIDPEHKMDPGDWGSFWEDRGFSGAAEPSDVWVRAFADGAAKLSQKVRSQL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F086022

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences