Metagenome / Metatranscriptome Family F086003

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F086003
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	100 residues
Representative Sequence	MRQRSHRRNLVVWRQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPAS
Number of Associated Samples	101
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	95.50 %
% of genes near scaffold ends (potentially truncated)	87.39 %
% of genes from short scaffolds (< 2000 bps)	89.19 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (52.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (22.523 % of family members)
Environment Ontology (ENVO)	Unclassified (28.829 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.946 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 30.69% β-sheet: 20.79% Coil/Unstructured: 48.51%
Feature Viewer

Powered by Feature Viewer

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF03631	Virul_fac_BrkB	2.70
PF14659	Phage_int_SAM_3	1.80
PF01872	RibD_C	1.80
PF13374	TPR_10	1.80
PF08386	Abhydrolase_4	1.80
PF12697	Abhydrolase_6	1.80
PF13443	HTH_26	1.80
PF00196	GerE	0.90
PF04075	F420H2_quin_red	0.90
PF00903	Glyoxalase	0.90
PF03480	DctP	0.90
PF05721	PhyH	0.90
PF01636	APH	0.90
PF07992	Pyr_redox_2	0.90
PF01494	FAD_binding_3	0.90
PF00561	Abhydrolase_1	0.90
PF00589	Phage_integrase	0.90
PF13751	DDE_Tnp_1_6	0.90
PF13424	TPR_12	0.90
PF12681	Glyoxalase_2	0.90
PF09851	SHOCT	0.90
PF03682	UPF0158	0.90
PF01327	Pep_deformylase	0.90
PF11188	DUF2975	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1295	Uncharacterized membrane protein, BrkB/YihY/UPF0761 family (not an RNase)	Function unknown [S]	2.70
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	1.80
COG0654	2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases	Energy production and conversion [C]	1.80
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	1.80
COG0242	Peptide deformylase	Translation, ribosomal structure and biogenesis [J]	0.90
COG0578	Glycerol-3-phosphate dehydrogenase	Energy production and conversion [C]	0.90
COG0644	Dehydrogenase (flavoprotein)	Energy production and conversion [C]	0.90
COG0665	Glycine/D-amino acid oxidase (deaminating)	Amino acid transport and metabolism [E]	0.90
COG5285	Ectoine hydroxylase-related dioxygenase, phytanoyl-CoA dioxygenase (PhyH) family	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.25 %
Unclassified	root	N/A	47.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	32.43 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.63 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	27.93 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	4.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	6.31 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	4.50 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.80 %
Corynebacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales	0.90 %
Micromonosporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales	0.90 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.90 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	0.90 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	6.31 %
Ruegeria	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria	4.50 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	1.80 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.90 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.90 %
Micromonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae	0.90 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Ruegeria pomeroyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	2.70 %
Pedococcus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus	1.80 %
Ruegeria marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria marina	1.80 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Amycolatopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis	0.90 %
Actinomadura	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura	0.90 %
Catellatospora	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora	0.90 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Ruegeria pomeroyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	2.70 %
Pedococcus badiiscoriae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus badiiscoriae	1.80 %
Ruegeria marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria marina	1.80 %
Catellatospora citrea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	0.90 %
unclassified Actinomadura	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura	0.90 %
unclassified Frankia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia	0.90 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.90 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	47.75 %
Ruegeria pomeroyi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	2.70 %
Pedococcus badiiscoriae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus badiiscoriae	1.80 %
Ruegeria marina	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria marina	1.80 %
Frankia sp. AgPm24	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. AgPm24	0.90 %
Actinomadura sp. CNU-125	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	0.90 %
Catellatospora citrea	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	0.90 %
Amycolatopsis balhimycina	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	0.90 %
Streptacidiphilus	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	0.90 %
Nocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	0.90 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459024\|GZTSFBX01EO631	Not Available	509	Open in IMG/M
3300005336\|Ga0070680_100743136	All Organisms → cellular organisms → Bacteria	845	Open in IMG/M
3300005337\|Ga0070682_100114766	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1800	Open in IMG/M
3300005355\|Ga0070671_101714977	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	558	Open in IMG/M
3300005434\|Ga0070709_10081684	All Organisms → cellular organisms → Bacteria	2110	Open in IMG/M
3300005435\|Ga0070714_100108903	Not Available	2450	Open in IMG/M
3300005435\|Ga0070714_100186069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Nocardiaceae	1892	Open in IMG/M
3300005435\|Ga0070714_101110565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300005437\|Ga0070710_11280663	Not Available	544	Open in IMG/M
3300005439\|Ga0070711_100552482	All Organisms → cellular organisms → Bacteria	955	Open in IMG/M
3300005445\|Ga0070708_100150736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Amycolatopsis → Amycolatopsis balhimycina	2162	Open in IMG/M
3300005467\|Ga0070706_100813374	Not Available	865	Open in IMG/M
3300005471\|Ga0070698_101410070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	647	Open in IMG/M
3300005548\|Ga0070665_100527579	All Organisms → cellular organisms → Bacteria	1192	Open in IMG/M
3300005549\|Ga0070704_100519037	All Organisms → cellular organisms → Bacteria	1036	Open in IMG/M
3300005553\|Ga0066695_10604712	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria pomeroyi	657	Open in IMG/M
3300005614\|Ga0068856_100304201	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1612	Open in IMG/M
3300005618\|Ga0068864_100882434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	882	Open in IMG/M
3300005841\|Ga0068863_100258370	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300006028\|Ga0070717_11002669	Not Available	760	Open in IMG/M
3300006028\|Ga0070717_11629385	Not Available	584	Open in IMG/M
3300006175\|Ga0070712_100202401	All Organisms → cellular organisms → Bacteria	1561	Open in IMG/M
3300006175\|Ga0070712_101459169	Not Available	597	Open in IMG/M
3300006176\|Ga0070765_100022178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4776	Open in IMG/M
3300006796\|Ga0066665_10828381	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria marina	726	Open in IMG/M
3300006800\|Ga0066660_10446487	Not Available	1080	Open in IMG/M
3300006854\|Ga0075425_100484909	All Organisms → cellular organisms → Bacteria	1423	Open in IMG/M
3300006903\|Ga0075426_11160043	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Ruegeria → Ruegeria marina	585	Open in IMG/M
3300006914\|Ga0075436_100602231	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300009101\|Ga0105247_10696376	Not Available	764	Open in IMG/M
3300009174\|Ga0105241_10215318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1611	Open in IMG/M
3300009545\|Ga0105237_10255753	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1754	Open in IMG/M
3300010333\|Ga0134080_10641896	Not Available	521	Open in IMG/M
3300010360\|Ga0126372_12886271	Not Available	532	Open in IMG/M
3300010361\|Ga0126378_10731930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300010396\|Ga0134126_10242065	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2137	Open in IMG/M
3300010399\|Ga0134127_10057141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3253	Open in IMG/M
3300011119\|Ga0105246_10831282	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	822	Open in IMG/M
3300011120\|Ga0150983_13507290	Not Available	672	Open in IMG/M
3300012198\|Ga0137364_10216253	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1408	Open in IMG/M
3300012473\|Ga0157340_1004479	Not Available	810	Open in IMG/M
3300012685\|Ga0137397_11060827	Not Available	593	Open in IMG/M
3300012922\|Ga0137394_11331127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	580	Open in IMG/M
3300012924\|Ga0137413_10289099	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1141	Open in IMG/M
3300012927\|Ga0137416_10685435	Not Available	899	Open in IMG/M
3300012960\|Ga0164301_11360638	Not Available	578	Open in IMG/M
3300012984\|Ga0164309_10254843	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptacidiphilus	1240	Open in IMG/M
3300012988\|Ga0164306_11551030	Not Available	569	Open in IMG/M
3300013105\|Ga0157369_10290592	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus badiiscoriae	1702	Open in IMG/M
3300013296\|Ga0157374_12910998	Not Available	506	Open in IMG/M
3300013297\|Ga0157378_10717536	Not Available	1020	Open in IMG/M
3300013306\|Ga0163162_10186613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Pedococcus → Pedococcus badiiscoriae	2201	Open in IMG/M
3300017792\|Ga0163161_10685362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	852	Open in IMG/M
3300017932\|Ga0187814_10026830	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2152	Open in IMG/M
3300017955\|Ga0187817_10005619	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6858	Open in IMG/M
3300017970\|Ga0187783_11234805	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → unclassified Frankia → Frankia sp. AgPm24	538	Open in IMG/M
3300018062\|Ga0187784_10350057	All Organisms → cellular organisms → Bacteria	1197	Open in IMG/M
3300020081\|Ga0206354_10039687	Not Available	662	Open in IMG/M
3300021171\|Ga0210405_10067011	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2833	Open in IMG/M
3300021178\|Ga0210408_10053785	All Organisms → cellular organisms → Bacteria → Terrabacteria group	3145	Open in IMG/M
3300021178\|Ga0210408_10734318	All Organisms → cellular organisms → Bacteria	776	Open in IMG/M
3300021178\|Ga0210408_11457604	Not Available	514	Open in IMG/M
3300021180\|Ga0210396_10637392	Not Available	924	Open in IMG/M
3300021180\|Ga0210396_11558450	Not Available	541	Open in IMG/M
3300021384\|Ga0213876_10791626	Not Available	505	Open in IMG/M
3300021402\|Ga0210385_11314605	Not Available	554	Open in IMG/M
3300021404\|Ga0210389_11562181	Not Available	501	Open in IMG/M
3300021406\|Ga0210386_10221114	Not Available	1609	Open in IMG/M
3300021432\|Ga0210384_11145767	Not Available	681	Open in IMG/M
3300021478\|Ga0210402_10373696	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1323	Open in IMG/M
3300021479\|Ga0210410_11013720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	719	Open in IMG/M
3300021559\|Ga0210409_10193535	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1854	Open in IMG/M
3300021559\|Ga0210409_10455927	Not Available	1140	Open in IMG/M
3300025898\|Ga0207692_11000080	Not Available	552	Open in IMG/M
3300025910\|Ga0207684_10045901	All Organisms → cellular organisms → Bacteria	3706	Open in IMG/M
3300025916\|Ga0207663_10931970	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	695	Open in IMG/M
3300025927\|Ga0207687_10167754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micromonosporales → Micromonosporaceae → Catellatospora → Catellatospora citrea	1690	Open in IMG/M
3300025928\|Ga0207700_10201073	Not Available	1679	Open in IMG/M
3300025928\|Ga0207700_11717892	Not Available	553	Open in IMG/M
3300025929\|Ga0207664_10201048	Not Available	1720	Open in IMG/M
3300025938\|Ga0207704_11942983	Not Available	506	Open in IMG/M
3300026078\|Ga0207702_11065528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	802	Open in IMG/M
3300026088\|Ga0207641_12605881	Not Available	503	Open in IMG/M
3300026310\|Ga0209239_1285294	Not Available	570	Open in IMG/M
3300027725\|Ga0209178_1401600	Not Available	521	Open in IMG/M
3300027903\|Ga0209488_10132342	Not Available	1881	Open in IMG/M
3300028718\|Ga0307307_10222616	Not Available	600	Open in IMG/M
3300028799\|Ga0307284_10148150	All Organisms → cellular organisms → Bacteria	904	Open in IMG/M
3300028811\|Ga0307292_10483372	Not Available	530	Open in IMG/M
3300028824\|Ga0307310_10461442	Not Available	636	Open in IMG/M
3300028828\|Ga0307312_10729649	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300028881\|Ga0307277_10129161	All Organisms → cellular organisms → Bacteria	1087	Open in IMG/M
3300028884\|Ga0307308_10578297	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031096\|Ga0308193_1051716	All Organisms → cellular organisms → Bacteria	619	Open in IMG/M
3300031573\|Ga0310915_11265121	Not Available	509	Open in IMG/M
3300031681\|Ga0318572_10836891	Not Available	547	Open in IMG/M
3300031724\|Ga0318500_10064442	Not Available	1594	Open in IMG/M
3300031754\|Ga0307475_10996339	Not Available	659	Open in IMG/M
3300031765\|Ga0318554_10102718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae → Actinomadura → unclassified Actinomadura → Actinomadura sp. CNU-125	1607	Open in IMG/M
3300031771\|Ga0318546_10314775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1085	Open in IMG/M
3300031779\|Ga0318566_10209262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	969	Open in IMG/M
3300031896\|Ga0318551_10323958	Not Available	869	Open in IMG/M
3300031897\|Ga0318520_10515932	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	739	Open in IMG/M
3300031938\|Ga0308175_101159490	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	858	Open in IMG/M
3300032001\|Ga0306922_10746090	Not Available	1027	Open in IMG/M
3300032001\|Ga0306922_10842892	Not Available	956	Open in IMG/M
3300032010\|Ga0318569_10322568	Not Available	719	Open in IMG/M
3300032063\|Ga0318504_10630760	Not Available	515	Open in IMG/M
3300032066\|Ga0318514_10202062	Not Available	1041	Open in IMG/M
3300032174\|Ga0307470_10666103	Not Available	788	Open in IMG/M
3300033475\|Ga0310811_11037157	Not Available	710	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	79.28%
Host-Associated	Host-Associated	20.72%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	77.48%
Plants	Host-Associated → Plants	20.72%
Aquatic	Environmental → Aquatic	1.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.48%
Rhizosphere	Host-Associated → Plants → Rhizosphere	11.71%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.11%
Freshwater	Environmental → Aquatic → Freshwater	1.80%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	54.05%
Loam	Environmental → Terrestrial → Soil → Loam	21.62%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.91%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.80%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	26.13%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.52%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	19.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.91%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.60%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.80%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	22.52%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	14.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.81%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	5.41%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.70%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.90%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459024	Grass soil microbial communities from Rothamsted Park, UK - FD1 (NaCl 300g/L 5ml)	Environmental	Open in IMG/M
3300005336	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG	Environmental	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012473	Arabidopsis rhizosphere microbial communities from North Carolina - M.Cvi.12.yng.090610	Host-Associated	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013105	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaG	Host-Associated	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017970	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018062	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020081	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021171	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-M	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021384	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9	Host-Associated	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021406	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-O	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300021559	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-M	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300027725	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)	Environmental	Open in IMG/M
3300027903	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)	Environmental	Open in IMG/M
3300028718	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031681	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f20	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031779	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f22	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032066	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FD1_06873350	2170459024	Grass Soil	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVVGVIWLDGPGGLVLLPGL
Ga0070680_1007431362	3300005336	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVL
Ga0070682_1001147664	3300005337	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEVE
Ga0070671_1017149771	3300005355	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLL
Ga0070709_100816841	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPA
Ga0070714_1001089031	3300005435	Agricultural Soil	MRQRLHRRNLVVWSQSAGSIGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRVRWRPLLAGGVLTVVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRP
Ga0070714_1001860691	3300005435	Agricultural Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFRRRRRIRRWIRNGALLTVVGLMPLGRAVRARWRPLLTGGVLTVVGVMWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEV
Ga0070714_1011105651	3300005435	Agricultural Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRCIRTGVLLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLL
Ga0070710_112806632	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWRQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPAS
Ga0070711_1005524821	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRCGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIVWLDGPGGLVLLPGLWLLLSAPLIPASPKADR
Ga0070708_1001507363	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRPHRRNLVVWSQSASSAGRFGAPPFMRTRRIRRWIRTGALLAIIGLMPLARAVRGRWRTVLGGVVLTAVGVTNRDGAGGLVLLPGLWFLLTAPLVP
Ga0070706_1008133743	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRSHRRNLVVWSQSASSVDRSGATPFTRTRRIRKWIRAGALLTIVGLMPLARAGRARWWLLPPVVVLMVVGVMLHAFVGVVL
Ga0070698_1014100701	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWRQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLIPAS
Ga0070665_1005275792	3300005548	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIP
Ga0070704_1005190371	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDSPGGLVLLPGLWLLLTAPLNPASSKADRMRRPEVE
Ga0066695_106047121	3300005553	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARSVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLIPASPKADRMRRPEAE
Ga0068856_1003042011	3300005614	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPAS
Ga0068864_1008824341	3300005618	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAP
Ga0068863_1002583703	3300005841	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTVVGIVWLDGPGGLVLLPGLWLLLSAPLIPASPKADRM
Ga0070717_110026692	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFRRRRRIRRWIRNGALLTVVGLMPLGRAVRARWRPLLTGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPAS
Ga0070717_116293852	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRLHRRNLVVWSQSAGSIGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRVRWRPLLAGGVLTVVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEVE
Ga0070712_1002024011	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLIPA
Ga0070712_1014591691	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIVWLDGPGGLVLLPGLWLLLSAPLIPASPKADRM
Ga0070765_1000221781	3300006176	Soil	MRLRSHRRNMVVWSQSASSVDRSGATPFTRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVLTVVGVMLHAFVGVVLLFLVS
Ga0066665_108283811	3300006796	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRCIRTGVLLTVVGLMPLARAVRARWRPLLAGGVLTAVGVMWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMPGPEVELEL
Ga0066660_104464872	3300006800	Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPSLPRRRRIRRWIRTGALLTVVRLRPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLVLSAPLIPAS
Ga0075425_1004849091	3300006854	Populus Rhizosphere	MRQRSHRRNLVVWSQSAGPVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGIIWLDGPGGLVLL
Ga0075426_111600431	3300006903	Populus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYSAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEVELE
Ga0075436_1006022311	3300006914	Populus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFMRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMR
Ga0105247_106963761	3300009101	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEVEL
Ga0105241_102153183	3300009174	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPL
Ga0105237_102557531	3300009545	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAP
Ga0134080_106418961	3300010333	Grasslands Soil	MRQRSRRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVIWLDGPGGMVLLPGLCLLLSAP
Ga0126372_128862711	3300010360	Tropical Forest Soil	MRRRSHRRNLVVWSQSAGSSGRSGAPPFTRRRRIRRWIRTGALLTVVALMPLARALRARWRPSLAGGVLTVVGVMWLDGPGGMVLLPGLWLLFSAPLSRASPEADRMRRPEAEREL
Ga0126378_107319301	3300010361	Tropical Forest Soil	MRRRSHRRTLVVWSQSAGSAGRCGAPPFTRRRRIRRWIRTGALLTVVGLRPLARAVRARWRPVLAGGVLTVAGVMWLDGP
Ga0134126_102420654	3300010396	Terrestrial Soil	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASP
Ga0134127_100571416	3300010399	Terrestrial Soil	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLI
Ga0105246_108312822	3300011119	Miscanthus Rhizosphere	VWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLI
Ga0150983_135072902	3300011120	Forest Soil	MRLRSHRRNLVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLTPASSKPDRMWRPEVE
Ga0137364_102162532	3300012198	Vadose Zone Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLNPASPK
Ga0157340_10044791	3300012473	Arabidopsis Rhizosphere	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGV
Ga0137397_110608272	3300012685	Vadose Zone Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLSVVGVSLHNNPGGMVLLPGLWLLLSAPLIPASSKADRMRREGPGQSR*
Ga0137394_113311272	3300012922	Vadose Zone Soil	MWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTFVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIP
Ga0137413_102890992	3300012924	Vadose Zone Soil	MRQRLHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTLVGLRPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPARPKPRSTGPIEVLSGVST*
Ga0137416_106854351	3300012927	Vadose Zone Soil	MRLRSHRRNLVVWSQPAGSVGRCGAPPFTRRRRIRRWIRTGALLTVVRLRPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLNPASPKPRSTA*
Ga0164301_113606381	3300012960	Soil	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPL
Ga0164309_102548433	3300012984	Soil	MRQRSHRRNLVVWSQSAGSVGKYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPKADRMRRPEVE
Ga0164306_115510301	3300012988	Soil	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVVGVIWLDGPGGLVLLPGLWLLLSAPLIPASPK
Ga0157369_102905923	3300013105	Corn Rhizosphere	MRRRSHRRNLVVRSQSAGSAGRYGAPPFTRGRRIRTGALLTVVGLMPLARAVRARWRPLLGGAVLTVVGVIWLDGPGGLV
Ga0157374_129109982	3300013296	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGTPPPTRRRRIRRWIRTGALLTFVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPL
Ga0157378_107175362	3300013297	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVAGVIWLDGPGGLVLLPGLWLLLSAPLIPASSKADRMRRPE
Ga0163162_101866131	3300013306	Switchgrass Rhizosphere	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVVGVIWLDGLGGLVL
Ga0163161_106853621	3300017792	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTAVGVMWLDGPGGMVLLPGLWLLLSAPLIPA
Ga0187814_100268303	3300017932	Freshwater Sediment	MRLRSHRRNLVVRSQSASSVGRYGTPPFTRTRRIHRWIRTGALLTVVGLMPLARAVRARWRLLLAGGVLTVAGVMLRGGPGGVVLLPG
Ga0187817_100056196	3300017955	Freshwater Sediment	MRLRSHRRNLVVRSQSASSVGRYGTPPFTRTRRIHRWIRTGALLTVVGLMPLARAVRPRWRLLLAGGVLTVIGYMLHGWLSGAVILPGLLFLAFAPLVPASPKADHMRRSELARVSENRGED
Ga0187783_112348051	3300017970	Tropical Peatland	MRLRPHRRNLVVWSQSASSVGRLGAAPFTRTRRSRRWIRTAALLAVVGLMPLLHAVRARWRIPLAGGALTVVGVILRGGPGSVVLLFGLLLLVSASLIPASP
Ga0187784_103500572	3300018062	Tropical Peatland	MRLRPHRRNLVVWSQSASSVGRYGAPPSTRTRRSRRWIRTAALVAVVGLMPLLHAARARWRIPLAGGALTVVGVILRGGPGGVVLLLGLLLLVSASLIP
Ga0206354_100396871	3300020081	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASP
Ga0210405_100670112	3300021171	Soil	MRPRSHRRNLVVWSQSAGSVGRYAAPPFTRRRRIRRWIRTGALLAVVRLMPLARAVRARWRPLLAGAVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLIPASPKNS
Ga0210408_100537851	3300021178	Soil	MRPRSHRRNLVVWSQTAGSAGRYAAPPFTRRRRIRRWIHTGALLTVVRLMPLARAVRARWRPLLAGAVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLIPASPKNS
Ga0210408_107343181	3300021178	Soil	MRRRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAMRARWRPLLAGGVLTVAGVVWLDGPGGMVLLPGLWLLLSAPLVPASPKADRMRCPE
Ga0210408_114576041	3300021178	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVLTVVGVMLHAFVGVVLLFLVSAPFVAARPRADRTRRSEL
Ga0210396_106373921	3300021180	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVLTVVGVMLHAFVGVVLLF
Ga0210396_115584501	3300021180	Soil	MRQRSHRRNLVVWSQSAGSVSSHGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTLVGIIWLDGPGGLVLLPGLWLLLSAPLISASPK
Ga0213876_107916261	3300021384	Plant Roots	MWLRPHRRTLVVWSSSAGPAGRPGGLRLTRSRRVRRRIRTGALLAVLGLTRLAAAARPRWRPLLAGGVLTAAGVMLRSGSGGVVLLPGLLLLASALFVPGGPGTARTRRGELERE
Ga0210385_113146051	3300021402	Soil	MRLRSRRQNLVVWGSSGGPAGGYGAQRPARRVRARRIRRWIRTGALLTVVGLMPLARAVRARWRPVLAGAVLTVVGVVWLDGPGGMVLLPGLWLLVSAP
Ga0210389_115621811	3300021404	Soil	MRQRSHRRNLVVWSQSAGSVGRCGAPPFNRRRRIRRGIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGG
Ga0210386_102211141	3300021406	Soil	MRLRSHRRNLVVWSQSASSVDRSGAPPFIRTRRIRKWIRTGALLTIVGLMPLARAGRARWWLLLPVGVLTVVGVMLHAFVGVVLLFLVSAPF
Ga0210384_111457671	3300021432	Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRSRIRRWIRTGALLTVVSLRPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLIPASSK
Ga0210402_103736962	3300021478	Soil	MRRRSHRRNLVVRSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLN
Ga0210410_110137202	3300021479	Soil	MRLPSHRRNLVVWSQSVGSAGRYGAPPFTRTRRIHRWIRTGVLLTVVGLTPVARAVRGRWRPLLAGGVLTVAGVLLRGGPGGVLLLPGLVFLAFALLVRASPKSDHMRRSELERE
Ga0210409_101935351	3300021559	Soil	RYAAPPFTRRRRIRRWIHTGALLTVVRLMPLARAVRARWRPLLAGAVLTVAGVMWLDGPGGMVLLPGLWLLLTAPLIPASPKNS
Ga0210409_104559271	3300021559	Soil	MRRRSHRRNLVVRSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGLVLLPGLWLLLTAPLNP
Ga0207692_110000801	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MRRRSHRRNLVVWSQSAGSAGRYGAPPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVVGVIWLDGPGGLVLLPG
Ga0207684_100459011	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRSHRRNLVVWSQSASSVDRSGATPFTRTRRIRKWIRAGALLTIVGLMPLARAGRARWWLLPPVVVLMVVGVMLHAFVGVVLLFLV
Ga0207663_109319701	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MRLRSHRRNLVVWSQSARSVGRYGALPFTRRRRICKWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLL
Ga0207687_101677541	3300025927	Miscanthus Rhizosphere	MRRRSHRRNLVVRSQSAGSAGRYGARPFTRGRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGAVLTVVGVIWLDGPGGLVLLPGLWLLLSAPLIPASSKADR
Ga0207700_102010733	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTVVGIVWLDGPGGLVLLP
Ga0207700_117178921	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLS
Ga0207664_102010481	3300025929	Agricultural Soil	MRQRLHRRNLVVWSQSAGSIGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRVRWRPLLAGGVLTVVGIIWLDGPGGLVLLPGLW
Ga0207704_119429831	3300025938	Miscanthus Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIIWLDGPGGLVL
Ga0207702_110655282	3300026078	Corn Rhizosphere	MRQRSHRRNLVVWSQSAGSVGRYGSPSFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRALLAGAVLTMVGIIWLDGPGGLVLLPGLWLLLSAPLIPASPK
Ga0207641_126058811	3300026088	Switchgrass Rhizosphere	MRQRSHRRNLVVWSQSAGSVGKYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGAVLTMVGIVWLDGPGGLVL
Ga0209239_12852941	3300026310	Grasslands Soil	MRLRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLVPASSKADRMQRPEV
Ga0209178_14016001	3300027725	Agricultural Soil	MRQQSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLGGGVLTVVGVIWLDGPGGLVLLPGL
Ga0209488_101323422	3300027903	Vadose Zone Soil	MRQRLHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLIPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLS
Ga0307307_102226161	3300028718	Soil	MRQRSHRRNLVVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVRLMPLARAMLARWRPLLAGGVLTAVGVMWLDGPGGMVLLPGLWLLLTAPLIPDSRQ
Ga0307284_101481501	3300028799	Soil	MRRRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRIGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0307292_104833721	3300028811	Soil	RRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRIGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0307310_104614421	3300028824	Soil	MRQRSHRRNLVVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVGLRPLARAVRARWRPLLAGGVLTAVGVMWLDGPGGMVLLPGLWLLLTAPLIPDSRQQARPSAH
Ga0307312_107296491	3300028828	Soil	GRYGAPPFTRRRRIRRWIRIGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0307277_101291612	3300028881	Soil	MRRRSRRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTLVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0307308_105782971	3300028884	Soil	NLVVWSQSAGSVSRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0308193_10517161	3300031096	Soil	AAMRRRSRRRNLVVWSQSAGSVGRYSAPPFTRRRRIRRWIRIGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPGSPKADRMRRPEVEARPEARAANLS
Ga0310915_112651211	3300031573	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVMLRGGSGGLLLFPGL
Ga0318572_108368911	3300031681	Soil	MRLRSHRRNLVVWSQSTGSVGRYGVPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPASPEADRRRRPEVELEL
Ga0318500_100644422	3300031724	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSVVGLMRLARAARARWRPLLAGGVLTAAGLVLRAGPGGMVLLPGLMFLVATPLTPASTKADRRRRSKLERDLA
Ga0307475_109963391	3300031754	Hardwood Forest Soil	MRQRSHRRNLVVWSQSAGSVGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPGLWLLLSAPLIPASPEADRM
Ga0318554_101027181	3300031765	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVMLRGGSGGL
Ga0318546_103147751	3300031771	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVMLRGGSGGLLLFPGLVFLASAPFVPASPKADRIRRWELE
Ga0318566_102092621	3300031779	Soil	MRLRPHRRNLVVWSQSSGSAGTSRVARPARTGRMRRGIRIGMLIALRGLLPLARGVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLIPASPKADRMGARR
Ga0318551_103239581	3300031896	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLL
Ga0318520_105159321	3300031897	Soil	MRLRPHRRNLVVWSQSSGSAGTSRVARPARTGRMRRGIRIGMLIALRGLLPLARGVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPL
Ga0308175_1011594901	3300031938	Soil	MRLRSHRRNLVVRSQSAGSVGRYGAPPFTPRRRIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVVGVMWLDGPGGMVLLPDCGFCCPPR
Ga0306922_107460901	3300032001	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSVVGLVRLARAARARWRPLLAGGVLTAAGLVLRAGPGGMVLLPGLMFLVATPLTPVST
Ga0306922_108428921	3300032001	Soil	MRLRSHRRNLVVWSQSAGSVGRYGVPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLI
Ga0318569_103225682	3300032010	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVMLRGGSGGLLLFPGLVF
Ga0318504_106307601	3300032063	Soil	MSLRSRRRNLIGWSQSASTVRRNGVRPFTRIRRIRRWIRTGALLAVVGLMPLARAVRARWRPLLAGAVLTVAGVMLRGGSGGLLLFPGLVFLASA
Ga0318514_102020622	3300032066	Soil	MRLRPHRRNLVVWSQSAGSAGRYGAPRFTTLARTGRTRRWIRTGALLSVVGLVRLARAARARWRPLLAGGVLTAAGLVLRAGPGGMVLLPGLMF
Ga0307470_106661031	3300032174	Hardwood Forest Soil	MRQRSHRRNLVVWSQSAGSVGRYGVPPPTRRRRIRRWIRTGALLTVVGLVPLARAVRARWRPLLAGGVLTVAGVMWLDGPGGMVLLPGLWLLLSAPLIPASAK
Ga0310811_110371571	3300033475	Soil	MRLRSHRRNLVVWSQSAGSAGRYGAPPFTRRRRIRRWIRTGALLTVVGLMPLARAVRARWRPLLAGGVLTMAGIIWLDGPGGLVLLPGLWLLLSAPLIPASSKPQSTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F086003

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences