Metagenome / Metatranscriptome Family F085884

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085884
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	73 residues
Representative Sequence	MSTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA
Number of Associated Samples	85
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	80.00 %
% of genes near scaffold ends (potentially truncated)	21.62 %
% of genes from short scaffolds (< 2000 bps)	81.08 %
Associated GOLD sequencing projects	78
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (67.568 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (32.432 % of family members)
Environment Ontology (ENVO)	Unclassified (27.027 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 45.33% β-sheet: 13.33% Coil/Unstructured: 41.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07592	DDE_Tnp_ISAZ013	1.80
PF00072	Response_reg	1.80
PF04471	Mrr_cat	1.80
PF13005	zf-IS66	0.90
PF14319	Zn_Tnp_IS91	0.90
PF13340	DUF4096	0.90
PF00239	Resolvase	0.90
PF00076	RRM_1	0.90
PF00496	SBP_bac_5	0.90
PF04392	ABC_sub_bind	0.90
PF07681	DoxX	0.90
PF07978	NIPSNAP	0.90
PF02371	Transposase_20	0.90
PF03050	DDE_Tnp_IS66	0.90
PF13610	DDE_Tnp_IS240	0.90
PF13439	Glyco_transf_4	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1961	Site-specific DNA recombinase SpoIVCA/DNA invertase PinE	Replication, recombination and repair [L]	0.90
COG2259	Uncharacterized membrane protein YphA, DoxX/SURF4 family	Function unknown [S]	0.90
COG2452	Predicted site-specific integrase-resolvase	Mobilome: prophages, transposons [X]	0.90
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.90
COG3436	Transposase	Mobilome: prophages, transposons [X]	0.90
COG3547	Transposase	Mobilome: prophages, transposons [X]	0.90
COG4270	Uncharacterized membrane protein	Function unknown [S]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
All Organisms	root	All Organisms	32.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
cellular organisms	root	All Organisms → cellular organisms	32.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	32.43 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	7.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	4.50 %
Nitrospinae/Tectomicrobia group	clade	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group	2.70 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.90 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Candidatus Tectomicrobia	phylum	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia	2.70 %
Firmicutes	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes	2.70 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.80 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.90 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.90 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.90 %
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Clostridia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia	2.70 %
Candidatus Entotheonella	genus	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	2.70 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.80 %
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	0.90 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.90 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.90 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Eubacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales	2.70 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.90 %
unclassified Cyanobacteria	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria	0.90 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.90 %
Burkholderiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae	0.90 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.90 %
Paraburkholderia	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia	0.90 %
Clostridiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae	0.90 %
unclassified Eubacteriales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales	0.90 %
Lachnospiraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae	0.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	0.90 %
Clostridiales bacterium VE202-03	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium VE202-03	0.90 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.90 %
Blautia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia	0.90 %
Clostridium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
unclassified Clostridium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium	0.90 %
Blautia obeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia → Blautia obeum	0.90 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	0.90 %
Clostridiales bacterium VE202-03	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium VE202-03	0.90 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	67.57 %
Clostridium sp. ATCC BAA-442	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. ATCC BAA-442	0.90 %
Blautia obeum	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia → Blautia obeum	0.90 %
Paraburkholderia atlantica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	0.90 %
Clostridiales bacterium VE202-03	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium VE202-03	0.90 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	0.90 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.90 %
Cyanobacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	0.90 %
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	0.90 %
Candidatus Entotheonella palauensis	species	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000044\|ARSoilOldRDRAFT_c001966	All Organisms → cellular organisms → Bacteria	1869	Open in IMG/M
3300000550\|F24TB_11093951	Not Available	1351	Open in IMG/M
3300000858\|JGI10213J12805_10684388	Not Available	614	Open in IMG/M
3300002099\|JGI24808J26613_1001192	All Organisms → cellular organisms → Bacteria	8828	Open in IMG/M
3300003319\|soilL2_10260591	All Organisms → cellular organisms → Bacteria → Proteobacteria	1608	Open in IMG/M
3300003324\|soilH2_10100887	All Organisms → cellular organisms → Bacteria	2175	Open in IMG/M
3300004479\|Ga0062595_102291687	Not Available	532	Open in IMG/M
3300004643\|Ga0062591_102817054	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Clostridiaceae → Clostridium → unclassified Clostridium → Clostridium sp. ATCC BAA-442	515	Open in IMG/M
3300005294\|Ga0065705_10952232	Not Available	560	Open in IMG/M
3300005295\|Ga0065707_10161190	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1562	Open in IMG/M
3300005295\|Ga0065707_10546881	Not Available	724	Open in IMG/M
3300005353\|Ga0070669_101583226	Not Available	570	Open in IMG/M
3300005444\|Ga0070694_101742821	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → unclassified Eubacteriales → Clostridiales bacterium VE202-03	530	Open in IMG/M
3300005447\|Ga0066689_10945552	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiaceae → Paraburkholderia → Paraburkholderia atlantica	532	Open in IMG/M
3300005718\|Ga0068866_11309009	Not Available	527	Open in IMG/M
3300005719\|Ga0068861_100633162	Not Available	986	Open in IMG/M
3300005719\|Ga0068861_101773970	Not Available	612	Open in IMG/M
3300005842\|Ga0068858_100189599	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → unclassified Cyanobacteria → Cyanobacteria bacterium 13_1_40CM_2_61_4	1943	Open in IMG/M
3300006049\|Ga0075417_10004173	All Organisms → cellular organisms → Bacteria → Proteobacteria	4725	Open in IMG/M
3300006058\|Ga0075432_10466984	Not Available	557	Open in IMG/M
3300006194\|Ga0075427_10111884	Not Available	515	Open in IMG/M
3300006196\|Ga0075422_10266450	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	724	Open in IMG/M
3300006196\|Ga0075422_10478993	Not Available	562	Open in IMG/M
3300006844\|Ga0075428_100226671	All Organisms → cellular organisms → Bacteria	2017	Open in IMG/M
3300006844\|Ga0075428_100333897	All Organisms → cellular organisms → Bacteria	1628	Open in IMG/M
3300006844\|Ga0075428_100778384	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300006844\|Ga0075428_101170984	Not Available	811	Open in IMG/M
3300006844\|Ga0075428_101843085	Not Available	629	Open in IMG/M
3300006844\|Ga0075428_101960701	Not Available	607	Open in IMG/M
3300006845\|Ga0075421_101720807	Not Available	677	Open in IMG/M
3300006846\|Ga0075430_100783993	Not Available	785	Open in IMG/M
3300006847\|Ga0075431_102119326	Not Available	517	Open in IMG/M
3300006853\|Ga0075420_101526685	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Clostridia → Eubacteriales → Lachnospiraceae → Blautia → Blautia obeum	573	Open in IMG/M
3300006880\|Ga0075429_101321688	Not Available	628	Open in IMG/M
3300006904\|Ga0075424_100217446	All Organisms → cellular organisms → Bacteria	2030	Open in IMG/M
3300006969\|Ga0075419_10114449	All Organisms → cellular organisms → Bacteria → Proteobacteria	1743	Open in IMG/M
3300006969\|Ga0075419_10629166	All Organisms → cellular organisms → Bacteria	756	Open in IMG/M
3300009012\|Ga0066710_101873687	Not Available	900	Open in IMG/M
3300009094\|Ga0111539_10655094	Not Available	1223	Open in IMG/M
3300009094\|Ga0111539_11068534	All Organisms → cellular organisms → Bacteria	938	Open in IMG/M
3300009094\|Ga0111539_12032342	Not Available	666	Open in IMG/M
3300009100\|Ga0075418_10795768	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300009100\|Ga0075418_11012348	Not Available	899	Open in IMG/M
3300009147\|Ga0114129_11767906	Not Available	753	Open in IMG/M
3300009147\|Ga0114129_12107103	Not Available	680	Open in IMG/M
3300009156\|Ga0111538_11570741	All Organisms → cellular organisms → Bacteria	829	Open in IMG/M
3300009162\|Ga0075423_10202896	All Organisms → cellular organisms → Bacteria	2080	Open in IMG/M
3300009553\|Ga0105249_10646148	Not Available	1115	Open in IMG/M
3300010040\|Ga0126308_10533588	Not Available	796	Open in IMG/M
3300010043\|Ga0126380_11928539	Not Available	538	Open in IMG/M
3300010362\|Ga0126377_10158267	All Organisms → cellular organisms → Bacteria	2134	Open in IMG/M
3300012204\|Ga0137374_10222645	Not Available	1606	Open in IMG/M
3300012212\|Ga0150985_103578889	Not Available	500	Open in IMG/M
3300012354\|Ga0137366_10548673	Not Available	832	Open in IMG/M
3300012358\|Ga0137368_10351251	Not Available	980	Open in IMG/M
3300013306\|Ga0163162_10135081	Not Available	2577	Open in IMG/M
3300013306\|Ga0163162_11401480	Not Available	795	Open in IMG/M
3300013306\|Ga0163162_12749515	Not Available	566	Open in IMG/M
3300015371\|Ga0132258_11756998	All Organisms → cellular organisms → Bacteria	1564	Open in IMG/M
3300015372\|Ga0132256_103108788	Not Available	558	Open in IMG/M
3300015372\|Ga0132256_103335708	Not Available	540	Open in IMG/M
3300015373\|Ga0132257_103495878	Not Available	572	Open in IMG/M
3300018052\|Ga0184638_1329377	Not Available	513	Open in IMG/M
3300018466\|Ga0190268_11905084	Not Available	541	Open in IMG/M
3300019255\|Ga0184643_1063234	Not Available	571	Open in IMG/M
3300025927\|Ga0207687_11263714	Not Available	635	Open in IMG/M
3300025961\|Ga0207712_10439695	Not Available	1104	Open in IMG/M
3300025961\|Ga0207712_11152396	Not Available	691	Open in IMG/M
3300025972\|Ga0207668_10473306	Not Available	1073	Open in IMG/M
3300025972\|Ga0207668_11257965	Not Available	666	Open in IMG/M
3300027511\|Ga0209843_1083290	Not Available	546	Open in IMG/M
3300027873\|Ga0209814_10092726	Not Available	1278	Open in IMG/M
3300027907\|Ga0207428_10048329	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	3414	Open in IMG/M
3300027907\|Ga0207428_10239585	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	1356	Open in IMG/M
3300027909\|Ga0209382_10380549	All Organisms → cellular organisms → Bacteria	1575	Open in IMG/M
3300028381\|Ga0268264_10802072	Not Available	941	Open in IMG/M
3300028596\|Ga0247821_10783471	Not Available	628	Open in IMG/M
3300028608\|Ga0247819_10153869	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella	1204	Open in IMG/M
3300028889\|Ga0247827_10237044	Not Available	1031	Open in IMG/M
3300030990\|Ga0308178_1097618	All Organisms → cellular organisms → Bacteria → Proteobacteria	620	Open in IMG/M
3300031098\|Ga0308191_1009938	All Organisms → cellular organisms → Bacteria → Proteobacteria	845	Open in IMG/M
3300031547\|Ga0310887_10015904	All Organisms → cellular organisms → Bacteria	2876	Open in IMG/M
3300031548\|Ga0307408_101398642	Not Available	659	Open in IMG/M
3300031740\|Ga0307468_101197303	Not Available	684	Open in IMG/M
3300031847\|Ga0310907_10473236	Not Available	666	Open in IMG/M
3300031854\|Ga0310904_10710881	Not Available	696	Open in IMG/M
3300031908\|Ga0310900_10945173	Not Available	706	Open in IMG/M
3300031908\|Ga0310900_11427986	Not Available	582	Open in IMG/M
3300031940\|Ga0310901_10460412	Not Available	564	Open in IMG/M
3300031995\|Ga0307409_101780869	Not Available	645	Open in IMG/M
3300032000\|Ga0310903_10095699	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1253	Open in IMG/M
3300032013\|Ga0310906_10068491	All Organisms → cellular organisms → Bacteria	1831	Open in IMG/M
3300032075\|Ga0310890_10254901	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1237	Open in IMG/M
3300032122\|Ga0310895_10438078	Not Available	647	Open in IMG/M
3300032180\|Ga0307471_102036210	All Organisms → cellular organisms → Bacteria → Nitrospinae/Tectomicrobia group → Candidatus Tectomicrobia → Candidatus Entotheonella → Candidatus Entotheonella palauensis	721	Open in IMG/M
3300032205\|Ga0307472_102303096	Not Available	545	Open in IMG/M
3300032211\|Ga0310896_10938906	Not Available	503	Open in IMG/M
3300034660\|Ga0314781_094239	Not Available	595	Open in IMG/M
3300034661\|Ga0314782_171665	Not Available	545	Open in IMG/M
3300034662\|Ga0314783_094466	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	54.95%
Environmental	Environmental	45.05%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	54.95%
Terrestrial	Environmental → Terrestrial	43.24%
Aquatic	Environmental → Aquatic	1.80%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	44.14%
Soil	Environmental → Terrestrial → Soil	43.24%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.81%
Freshwater	Environmental → Aquatic → Freshwater	0.90%
Sediment	Environmental → Aquatic → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	39.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	38.74%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.41%
Loam	Environmental → Terrestrial → Soil → Loam	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.90%
Sand	Environmental → Terrestrial → Soil → Sand	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	38.74%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.32%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	15.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.41%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.90%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	32.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	15.32%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.50%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	4.50%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.70%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	2.70%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Sugarcane Root And Bulk Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.90%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000044	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis soil old	Host-Associated	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000858	Soil microbial communities from Great Prairies - Wisconsin Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300003319	Sugarcane bulk soil Sample L2	Environmental	Open in IMG/M
3300003324	Sugarcane bulk soil Sample H2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300004643	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 3	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006049	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1	Host-Associated	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006194	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1	Host-Associated	Open in IMG/M
3300006196	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012532	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_80_16 metaG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019255	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027511	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028608	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Xylose_Day6	Environmental	Open in IMG/M
3300028889	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2	Environmental	Open in IMG/M
3300030990	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_149 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031098	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_186 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031548	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-3	Host-Associated	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300031995	Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2	Host-Associated	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300034660	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034662	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R4 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ARSoilOldRDRAFT_0019661	3300000044	Arabidopsis Rhizosphere	MPSPHTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVTLSFLMAAKRSLHVQSHKSDGYAVWHLPAAA*
F24TB_110939512	3300000550	Soil	MTSDENIHQRNESNRRARAFLHDILAGGPQPYQVVHEQAVAQGISKSYLLTAKRSLNVKSRKRDGHAIWDLPAAA*
F14TC_1076349061	3300000559	Soil	MTSDENIHQRNESNRRARAFLHDILAGGPQPYQVVHEQAVAQGISKSYLLTARRSLHV
JGI10213J12805_106843882	3300000858	Soil	DTYIQQRNESNRKARAFLQALLTEGPQPYQVVHQQAVAQGISKSYLLTARRSLHVESHKSDGYAVWNLPAA*
JGI24808J26613_10011922	3300002099	Soil	MYTDKYRHRSTEINRRARQFLGDLLAEGPQPYQVVHLRAVAQGVSKSALLVAKRSLHVESHDRGGYALWSLPAAA*
soilL2_102605912	3300003319	Sugarcane Root And Bulk Soil	MTSDENTHQRTESNRRARAFLHDLLAGGPQPYQVVHEQAVAQGISKSYLLTAKRSLNVKSRKSDGHAFWDLPAAA*
soilH2_101008872	3300003324	Sugarcane Root And Bulk Soil	MTSDENIHQRTESNRRARAFLHDLLAGGPQPYQVVHEQAVAQGISKSYLLTAKRSLNVKSRKSDGHAFWDLPAAA*
Ga0062595_1022916871	3300004479	Soil	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA*
Ga0062591_1028170541	3300004643	Soil	MSTDTYIQQRNESNRKARAFLREVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESSKSDGYAVWSLPAAA*
Ga0065705_103364131	3300005294	Switchgrass Rhizosphere	MSTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSL
Ga0065705_107191002	3300005294	Switchgrass Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSL
Ga0065705_109522321	3300005294	Switchgrass Rhizosphere	MSTDQYIHRRNELNRRARTFLQDLLTEGPQTYAMIRQYAREAGVPLSYLLTARRSLHVESRKSDGYAVWNLPAAA*
Ga0065707_101611902	3300005295	Switchgrass Rhizosphere	MPSPHTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVTLSFLMAAKRSLHVQ
Ga0065707_105468812	3300005295	Switchgrass Rhizosphere	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLSYLLAAKRSLHVESRKSDGYAVWNLPAAA*
Ga0070669_1015832262	3300005353	Switchgrass Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHIESYKSDGYAVWSLPAAA*
Ga0070694_1017428211	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MSTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA*
Ga0066689_109455521	3300005447	Soil	SIDTYIQQRNESNRKARAFLREVLAGGPQTYQIVHEQAVQQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA*
Ga0068866_113090091	3300005718	Miscanthus Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKS
Ga0068861_1006331622	3300005719	Switchgrass Rhizosphere	MSTDQYIQRRNELNRRARTFLHDLLTKGPQTYATIRQHAHEAGVSLSCVLTAKRSLHVESRTRDGYAVWNLPDAA*
Ga0068861_1017739701	3300005719	Switchgrass Rhizosphere	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA*
Ga0068858_1001895992	3300005842	Switchgrass Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA*
Ga0075417_100041735	3300006049	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVASYKSDGYAVWSLPAAA*
Ga0075432_104669842	3300006058	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLQVESRKSDGGAVWNLPAAA*
Ga0075427_101118842	3300006194	Populus Rhizosphere	MSAYAYIQQRNESNRKARQFLQDLLTGGPQTYQVVLEQAVKQGISKAALMLAKSSLHVESHKRDGYAVWNLPAAA*
Ga0075422_102664501	3300006196	Populus Rhizosphere	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLQVESRKSEGGAVWNLPAAA*
Ga0075422_104789931	3300006196	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA*
Ga0075428_1002266713	3300006844	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLHVESRKSDGGAVWNLPAAA*
Ga0075428_1003338973	3300006844	Populus Rhizosphere	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLQVESRKSDGGAVWNLPAAA*
Ga0075428_1007783842	3300006844	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAILQRAREAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA*
Ga0075428_1011709841	3300006844	Populus Rhizosphere	MLTPYAYIQQRNASNRKARQFLHDLLANGPQTYAMIHQHAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAAA*
Ga0075428_1018430851	3300006844	Populus Rhizosphere	MPTETYIQQRNASNRKARAFLQEVLAGGPQPYQIVHAQAVKQGIATSSLLTAMRSLHVASSKRDGYAVWSLPAAA*
Ga0075428_1019607012	3300006844	Populus Rhizosphere	TYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVCQRAHEAGVPLSYLLIAKRSLHVESRKSDGCAVWNLPTAA*
Ga0075421_1017208071	3300006845	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLQVESRKSEGGAVWNLPAAA*
Ga0075421_1022151751	3300006845	Populus Rhizosphere	MSAYAYIQQRNESNRKARQFLHDLLTEGPQTYQVVLEQAVKKGISKATLMLAKSTLHVESHK
Ga0075430_1001507304	3300006846	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHV
Ga0075430_1007839931	3300006846	Populus Rhizosphere	MSAYAYIQQRNESNRKARQFLQDLLTGGPQTYQVVLEQAVKKGISKATLMLAKSTLHVESHKSDGYA
Ga0075431_1021193261	3300006847	Populus Rhizosphere	MPTETYIPQRNASNRKARAFLQEVLAGGPQPYQIVHAQAVKQGIATSSLLTAMRSLHVASSKRDGYAVWSLPAAA*
Ga0075420_1015266851	3300006853	Populus Rhizosphere	NRKARQFLQDLLTGGPQTYQVVLEQAVKQGISKAALMLAKSSLHVESHKRDGYAVWNLPAAA*
Ga0075429_1013216881	3300006880	Populus Rhizosphere	GKCYPLMSYSVGSQERSAKMPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA*
Ga0075424_1002174463	3300006904	Populus Rhizosphere	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA*
Ga0075419_101144491	3300006969	Populus Rhizosphere	MPTDTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVASYKSDGYAVWSLPAAA*
Ga0075419_103157291	3300006969	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTAR
Ga0075419_106291661	3300006969	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA*
Ga0075419_106775261	3300006969	Populus Rhizosphere	MSAYAYIQQRNESNRKARQFLQDLLTGGPQTYQVVLEQAVKQGISKAALMLAKSSLHVES
Ga0066710_1018736871	3300009012	Grasslands Soil	MPSPDTYIQQRNESNRKARAFLQEVLANGPQTYAMIHQQAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAAA
Ga0111539_106550942	3300009094	Populus Rhizosphere	MSYFVGSQERSAKMSAYAYIQQRNESNRKARQFLQDLLTGGPQTYQVVLEQAVKQGISKAALMLAKSSLHVESHKRDGYAVWNLPAAA*
Ga0111539_110685341	3300009094	Populus Rhizosphere	MLTPYAYIQQRNASNRKARQFLHDLLANGPQTYAMIQQHAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAAA*
Ga0111539_120323421	3300009094	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSDGGAVWNLPAAA*
Ga0075418_107957681	3300009100	Populus Rhizosphere	MPSPYTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVTLSFLMAAKRSLHVQSHKSDGYAVWHLPAAA*
Ga0075418_110123482	3300009100	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQPYQIVHAQAVKQGIATSSLLTAMRSLHVASSKRDGYAVWSLPAAA*
Ga0114129_117679061	3300009147	Populus Rhizosphere	MPTDTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVASSKRDGYAGWSLPAAA*
Ga0114129_121071032	3300009147	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAILQRAHEAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA*
Ga0105243_124116282	3300009148	Miscanthus Rhizosphere	MSTNTSIQQRNASNRKARAFLQDLLTGGPQPYQVVHQQAVAQGIPKSYLLTAKRSLHVE
Ga0111538_115707411	3300009156	Populus Rhizosphere	IQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLHVESRKSDGGAVWNLPAAA*
Ga0075423_102028962	3300009162	Populus Rhizosphere	MSTDTYIQQRNESNRKARAFLREVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESSKRDGYAVWRLPAAA*
Ga0105249_106461482	3300009553	Switchgrass Rhizosphere	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESSKSDGYAVWSLPAAA*
Ga0126308_105335881	3300010040	Serpentine Soil	MSTYADIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLSYLLTAKRSLHVASRKSDGCAVWNLPAAA*
Ga0126380_119285391	3300010043	Tropical Forest Soil	MSPDQYIRRRNELNRRARTFLQDLLTEGPQTYQAVRQRAREAGISLSCVLTAKRSLNVQSRTRDGYAVWNLPAAA*
Ga0126377_101582673	3300010362	Tropical Forest Soil	MSPDQYIRRRNELNRRARTFLQDLLTEGPQTYQAVRQRAREAGISLSCVLTAKRSLNVESRTRAGYAVWHLPGVA*
Ga0137363_107144123	3300012202	Vadose Zone Soil	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVES
Ga0137374_102226452	3300012204	Vadose Zone Soil	MPSPDTYIHRRNESNRKARQFLHDILAEGPQTFQLVHEQAVKQGISKSTLMLAKHSLNVQSRKSDGYAVWQLPAAA*
Ga0150985_1035788892	3300012212	Avena Fatua Rhizosphere	MPIPDTEIHRRNEANRRARAFLQDLLAEGPQPFQTIHQQAVAQGISKTTLMAAKRSLNVKSRKSDGHAVWNLPAAV*
Ga0137366_105486731	3300012354	Vadose Zone Soil	MPSPDTYIHRRNESDRKARQFLHDILAEGPQTFQLVHEQAVKQGISKSTLMLAKHSLNVQSRKSDGYAVWQLPAAA*
Ga0137368_103512512	3300012358	Vadose Zone Soil	MPSPDTYIHRRNESNRKARQFLHDILAEGPQTFQLVHEQAVKQVISKSTLMLAKHSLNVQSRKSDGYAVWQLPAAA*
Ga0137373_104670282	3300012532	Vadose Zone Soil	MPSPDTYIHRRNESNRKARQFLHDILAEGPQTFQLVHEQAVKQGISKSTLMLAKHSLNVQ
Ga0163162_101350813	3300013306	Switchgrass Rhizosphere	MSTDTYIQQRNESNRKARAFLQDLLTGGPQPYQVVHQQAVAQGIPKSYLLTAKRSLHVESHKSDGYAVWNLPAAA*
Ga0163162_114014801	3300013306	Switchgrass Rhizosphere	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAA
Ga0163162_127495151	3300013306	Switchgrass Rhizosphere	MGSQERSAKMLTPYAYIQQRNASNRKARQFLHDLLANGPQTYAMIHQHAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAAA*
Ga0132258_117569982	3300015371	Arabidopsis Rhizosphere	MPSPHTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVTLSFLMAAKRSLHVQSHKSDVYAVWHLPAAA*
Ga0132256_1031087881	3300015372	Arabidopsis Rhizosphere	STYADIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA*
Ga0132256_1033357082	3300015372	Arabidopsis Rhizosphere	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISQSYLLTARRSLHVASSKSDGYAVWSLPAAA*
Ga0132257_1034958781	3300015373	Arabidopsis Rhizosphere	MPIDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA*
Ga0184638_13293771	3300018052	Groundwater Sediment	MPSPDTYIHRRNESNRKARQFLHDILAGGPQTFQLVHEQAVKQGIAKSTLMLAKHSLNVQSRKSDGY
Ga0190268_119050842	3300018466	Soil	MPTDTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAAA
Ga0184643_10632341	3300019255	Groundwater Sediment	MPTDTYIQQRNESNRKARAFLQEALAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0207687_112637141	3300025927	Miscanthus Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA
Ga0207712_104396951	3300025961	Switchgrass Rhizosphere	MSTDQYIQRRNELNRRARTFLHDLLTKGPQTYATIRQHAHEAGVSLSCVLTAKRSLHVESRTRDGYAVWNLPDAA
Ga0207712_111523962	3300025961	Switchgrass Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESSKSDGYAVWSLPAAA
Ga0207668_104733061	3300025972	Switchgrass Rhizosphere	MPSPHTYIQQRNESNRKARAFLQVVLANGPQTYAMIHQHAREAGVTLSFLMAAKRSLHVQSHKSDGYAVWHLPAAA
Ga0207668_112579651	3300025972	Switchgrass Rhizosphere	NESNRKARAFLQDLLTGGPQPYQVVHQQAVAQGIPKSYLLTAKRSLHVESHKSDGYAVWNLPAAA
Ga0207677_110518001	3300026023	Miscanthus Rhizosphere	MSTNTSIQQRNASNRKARAFLQEVLAGGPQSYQIVHEQAVKQGISKSYLLTAR
Ga0209843_10832901	3300027511	Groundwater Sand	MPSPDTYIHRRNESNRKARQFLHDILAEGPQTFQLVHEQAVKQGISKSTLMLAKHSLNVQSRKSDGYAVWQLPAAA
Ga0209814_100927261	3300027873	Populus Rhizosphere	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVASYKSDGYAVWSLPAAA
Ga0207428_100483291	3300027907	Populus Rhizosphere	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSEGGAVWNLPAAA
Ga0207428_102395852	3300027907	Populus Rhizosphere	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLQVESRKSDGGAVWNLPAAA
Ga0209382_103805491	3300027909	Populus Rhizosphere	QRNESNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLQVESRKSDGGAVWNLPAAA
Ga0268264_108020721	3300028381	Switchgrass Rhizosphere	MSTDTYIQQRNESNRKARAFLQEVLAGGPQSYQIVHEQAVKQGISKSYLLTARRSLHVESHKSDGYAVWNLPAAA
Ga0247821_107834711	3300028596	Soil	MSTYAFIQQRNESNRKARAFLQDLLTEGPQTYQAIRQRAHEAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA
Ga0247819_101538692	3300028608	Soil	MSTYADIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAGEAGVPLSYLLIAKRSLHVESRKSDGCAVWNLPAAA
Ga0247827_102370441	3300028889	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSDGCAVWNLPAAA
Ga0308178_10976181	3300030990	Soil	AKMPTDTYIQQRNESNRKARAFLREVLAGGPQTYQIVHEQAVQQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0308191_10099382	3300031098	Soil	AKMPTDTYIQQRNESNRKARAFLQEALAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0310887_100159043	3300031547	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSDGGAVWNLPAAA
Ga0307408_1013986421	3300031548	Rhizosphere	MPTDTSIQQRNESNRKARVFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0307468_1011973032	3300031740	Hardwood Forest Soil	MPTDTYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0310907_104732361	3300031847	Soil	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLQVESRKSDGGAVWNLPAAA
Ga0310904_107108811	3300031854	Soil	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISQSYLLTARRSLHVASSKSDGYAGWSLPAAA
Ga0310900_109451731	3300031908	Soil	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLIAKRSLHVESRKSDGGAVWNLPAAA
Ga0310900_114279861	3300031908	Soil	MPTDTYIQQRNASNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISQSYLLTARRSLHVASSKSDGYAVWSLPAAA
Ga0310901_104604121	3300031940	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLQVESRKSDGGAVWNLPAAA
Ga0307409_1017808692	3300031995	Rhizosphere	MPTDTSIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0310903_100956991	3300032000	Soil	MSTYAYIQQRNESNRKARAFLQDLLTEGPQTYQAIRQRAHEAGVPLAYLLTAKRSLHVESRKSDGGAVWNLPAAA
Ga0310906_100684913	3300032013	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLQVESRKSDGGAVWNLPAAA
Ga0310890_102549013	3300032075	Soil	MLTPYAYIQQRNASNRKARQFLHDLLANGPQTYAMIQQHAREAGVALSFLMAAKRSLHVQSHKSDGYAVWHLPAA
Ga0310895_104380782	3300032122	Soil	ASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLAYLLTAKRSLHVESRKSDGGAVWNLPAAA
Ga0307471_1020362102	3300032180	Hardwood Forest Soil	YTDTYIQQRNESNRKAREFLREVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESYKSDGYAVWSLPAAA
Ga0307472_1023030961	3300032205	Hardwood Forest Soil	KMSTYAYIQQRNESNRKARAFLQEVLAGGPQTYQIVHEQAVKQGISKSYLLTARRSLHVESSKSDGYAVWSLPAAA
Ga0310896_109389061	3300032211	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLAYLLTAKRSLQVESRKS
Ga0314781_094239_228_455	3300034660	Soil	MSTYAYIQQRNASNRKARAFLQDLLTEGPQTYQAVRQRAREAGVPLAYLLTAKRSLHVESRKSEGGAVWNLPAAA
Ga0314782_171665_56_286	3300034661	Soil	MTIPDSYIHRRNESNRRARQFLSDLLIGGPQSYQTIHQQAVAHGVSKSYLLTAKRSLHVESRKSDGYAVWNLPAAA
Ga0314783_094466_396_623	3300034662	Soil	MSTYADIQQRNESNRKARAFLQDLLTEGPQTYQAVRQRAHEAGVPLSYLLTAKRSLHVESRKSDGGAVWNLPAAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085884

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences