NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085835

Metagenome Family F085835

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085835
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 118 residues
Representative Sequence MNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Number of Associated Samples 86
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 11.71 %
% of genes near scaffold ends (potentially truncated) 49.55 %
% of genes from short scaffolds (< 2000 bps) 90.99 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (57.658 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere
(12.613 % of family members)
Environment Ontology (ENVO) Unclassified
(72.072 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(80.180 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 38.66%    β-sheet: 4.20%    Coil/Unstructured: 57.14%
Feature Viewer
Powered by Feature Viewer


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF00753Lactamase_B 8.11
PF02586SRAP 3.60
PF135322OG-FeII_Oxy_2 2.70
PF01436NHL 1.80
PF07799DUF1643 1.80
PF05988DUF899 1.80
PF00072Response_reg 0.90
PF00501AMP-binding 0.90
PF00860Xan_ur_permease 0.90
PF04392ABC_sub_bind 0.90
PF13276HTH_21 0.90
PF13586DDE_Tnp_1_2 0.90
PF01717Meth_synt_2 0.90
PF01694Rhomboid 0.90
PF08535KorB 0.90
PF05930Phage_AlpA 0.90
PF02518HATPase_c 0.90
PF07883Cupin_2 0.90
PF08240ADH_N 0.90
PF12697Abhydrolase_6 0.90
PF09954DUF2188 0.90
PF13924Lipocalin_5 0.90
PF07273DUF1439 0.90
PF00561Abhydrolase_1 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG2135ssDNA abasic site-binding protein YedK/HMCES, SRAP familyReplication, recombination and repair [L] 3.60
COG4312Predicted dithiol-disulfide oxidoreductase, DUF899 familyGeneral function prediction only [R] 1.80
COG4333Uncharacterized conserved protein, DUF1643 domainFunction unknown [S] 1.80
COG0620Methionine synthase II (cobalamin-independent)Amino acid transport and metabolism [E] 0.90
COG0705Membrane-associated serine protease, rhomboid familyPosttranslational modification, protein turnover, chaperones [O] 0.90
COG1475Chromosome segregation protein Spo0J, contains ParB-like nuclease domainCell cycle control, cell division, chromosome partitioning [D] 0.90
COG2984ABC-type uncharacterized transport system, periplasmic componentGeneral function prediction only [R] 0.90
COG3311DNA-binding transcriptional regulator AlpATranscription [K] 0.90


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A57.66 %
All OrganismsrootAll Organisms42.34 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000955|JGI1027J12803_101003129Not Available1300Open in IMG/M
3300001431|F14TB_103983213Not Available856Open in IMG/M
3300005093|Ga0062594_100201108All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → unclassified Burkholderiales → Burkholderiales bacterium1389Open in IMG/M
3300005293|Ga0065715_10462653Not Available814Open in IMG/M
3300005328|Ga0070676_10483112All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans876Open in IMG/M
3300005330|Ga0070690_100600210All Organisms → cellular organisms → Bacteria835Open in IMG/M
3300005331|Ga0070670_100090434All Organisms → cellular organisms → Bacteria2631Open in IMG/M
3300005331|Ga0070670_101071861Not Available734Open in IMG/M
3300005331|Ga0070670_102100041All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans521Open in IMG/M
3300005333|Ga0070677_10226677Not Available916Open in IMG/M
3300005335|Ga0070666_10263830All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans1221Open in IMG/M
3300005340|Ga0070689_102026625Not Available527Open in IMG/M
3300005354|Ga0070675_100471705All Organisms → cellular organisms → Bacteria1128Open in IMG/M
3300005354|Ga0070675_102152111Not Available514Open in IMG/M
3300005356|Ga0070674_100010516All Organisms → cellular organisms → Bacteria → Proteobacteria5599Open in IMG/M
3300005356|Ga0070674_100233699All Organisms → cellular organisms → Bacteria → Proteobacteria1436Open in IMG/M
3300005364|Ga0070673_100327774All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1354Open in IMG/M
3300005364|Ga0070673_101167312All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales721Open in IMG/M
3300005364|Ga0070673_101343938Not Available672Open in IMG/M
3300005365|Ga0070688_100903467Not Available697Open in IMG/M
3300005366|Ga0070659_100360897All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans1220Open in IMG/M
3300005455|Ga0070663_101202220Not Available666Open in IMG/M
3300005456|Ga0070678_101115749Not Available729Open in IMG/M
3300005457|Ga0070662_100122917All Organisms → cellular organisms → Bacteria1991Open in IMG/M
3300005543|Ga0070672_100274279Not Available1425Open in IMG/M
3300005564|Ga0070664_100150927All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ramlibacter2051Open in IMG/M
3300005616|Ga0068852_102607730Not Available525Open in IMG/M
3300005617|Ga0068859_100628185Not Available1166Open in IMG/M
3300005840|Ga0068870_11060138Not Available581Open in IMG/M
3300005841|Ga0068863_101163835Not Available776Open in IMG/M
3300005841|Ga0068863_101518348Not Available678Open in IMG/M
3300006237|Ga0097621_100978944All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans790Open in IMG/M
3300006237|Ga0097621_101525436All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Burkholderiales genera incertae sedis → Pseudorivibacter → Pseudorivibacter rhizosphaerae634Open in IMG/M
3300006881|Ga0068865_100372897All Organisms → cellular organisms → Bacteria → Proteobacteria1162Open in IMG/M
3300006881|Ga0068865_100702639Not Available864Open in IMG/M
3300006881|Ga0068865_100757404Not Available834Open in IMG/M
3300009148|Ga0105243_11065956All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans815Open in IMG/M
3300009174|Ga0105241_10778925All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans879Open in IMG/M
3300009177|Ga0105248_10018703All Organisms → cellular organisms → Bacteria → Proteobacteria7660Open in IMG/M
3300009177|Ga0105248_12621917Not Available575Open in IMG/M
3300009551|Ga0105238_10678079Not Available1042Open in IMG/M
3300009553|Ga0105249_10075113All Organisms → cellular organisms → Bacteria → Proteobacteria3130Open in IMG/M
3300009553|Ga0105249_10176841All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales2073Open in IMG/M
3300009553|Ga0105249_11321966All Organisms → cellular organisms → Bacteria792Open in IMG/M
3300010397|Ga0134124_11437598Not Available716Open in IMG/M
3300010401|Ga0134121_10218109All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae1657Open in IMG/M
3300011119|Ga0105246_10409831Not Available1128Open in IMG/M
3300012951|Ga0164300_10958158Not Available546Open in IMG/M
3300012958|Ga0164299_10754445Not Available688Open in IMG/M
3300012958|Ga0164299_11014078All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans613Open in IMG/M
3300012989|Ga0164305_10515784Not Available944Open in IMG/M
3300013296|Ga0157374_10759963Not Available984Open in IMG/M
3300013306|Ga0163162_10924576All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales984Open in IMG/M
3300013307|Ga0157372_12596201Not Available581Open in IMG/M
3300013308|Ga0157375_10110703All Organisms → cellular organisms → Bacteria2844Open in IMG/M
3300013308|Ga0157375_12467389Not Available621Open in IMG/M
3300014325|Ga0163163_12114744Not Available622Open in IMG/M
3300014325|Ga0163163_12503660Not Available574Open in IMG/M
3300014745|Ga0157377_11194502All Organisms → cellular organisms → Bacteria588Open in IMG/M
3300014968|Ga0157379_11418336Not Available674Open in IMG/M
3300015371|Ga0132258_12776837All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1220Open in IMG/M
3300015374|Ga0132255_102503801Not Available788Open in IMG/M
3300017792|Ga0163161_10170985All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1661Open in IMG/M
3300017792|Ga0163161_10299507All Organisms → cellular organisms → Bacteria1266Open in IMG/M
3300017792|Ga0163161_10517925Not Available973Open in IMG/M
3300017792|Ga0163161_10811989Not Available787Open in IMG/M
3300018432|Ga0190275_11463432Not Available760Open in IMG/M
3300018476|Ga0190274_12868008Not Available578Open in IMG/M
3300018481|Ga0190271_13175457Not Available551Open in IMG/M
3300025290|Ga0207673_1053355Not Available573Open in IMG/M
3300025315|Ga0207697_10054433All Organisms → cellular organisms → Bacteria1658Open in IMG/M
3300025893|Ga0207682_10020640Not Available2587Open in IMG/M
3300025893|Ga0207682_10077576All Organisms → cellular organisms → Bacteria → Proteobacteria1418Open in IMG/M
3300025899|Ga0207642_10073423All Organisms → cellular organisms → Bacteria1636Open in IMG/M
3300025904|Ga0207647_10167738All Organisms → cellular organisms → Bacteria1279Open in IMG/M
3300025908|Ga0207643_10864832Not Available586Open in IMG/M
3300025918|Ga0207662_10196276All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans1304Open in IMG/M
3300025919|Ga0207657_10872967Not Available694Open in IMG/M
3300025920|Ga0207649_10933528Not Available681Open in IMG/M
3300025923|Ga0207681_10338045Not Available1202Open in IMG/M
3300025923|Ga0207681_10535310Not Available962Open in IMG/M
3300025923|Ga0207681_10839124Not Available768Open in IMG/M
3300025924|Ga0207694_10306371All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans1309Open in IMG/M
3300025925|Ga0207650_11095923Not Available678Open in IMG/M
3300025930|Ga0207701_10025897All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales5575Open in IMG/M
3300025930|Ga0207701_10706718All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Variovorax853Open in IMG/M
3300025937|Ga0207669_10364795All Organisms → cellular organisms → Bacteria1120Open in IMG/M
3300025940|Ga0207691_11341660Not Available589Open in IMG/M
3300025941|Ga0207711_10200723All Organisms → cellular organisms → Bacteria1820Open in IMG/M
3300025945|Ga0207679_10271204Not Available1451Open in IMG/M
3300025960|Ga0207651_10462269All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1091Open in IMG/M
3300025960|Ga0207651_11953858Not Available527Open in IMG/M
3300026067|Ga0207678_10889922Not Available787Open in IMG/M
3300026088|Ga0207641_11505413Not Available674Open in IMG/M
3300026089|Ga0207648_10067697All Organisms → cellular organisms → Bacteria → Proteobacteria3112Open in IMG/M
3300026089|Ga0207648_10646665Not Available977Open in IMG/M
3300028379|Ga0268266_11155014All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae → Ottowia → Ottowia thiooxydans749Open in IMG/M
3300028380|Ga0268265_11547785Not Available667Open in IMG/M
3300028592|Ga0247822_10176381All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales1587Open in IMG/M
3300028596|Ga0247821_10717228Not Available654Open in IMG/M
3300028809|Ga0247824_10692540Not Available621Open in IMG/M
3300031231|Ga0170824_108982097Not Available945Open in IMG/M
3300031366|Ga0307506_10460861Not Available532Open in IMG/M
3300031538|Ga0310888_10585540Not Available676Open in IMG/M
3300031740|Ga0307468_101311613Not Available660Open in IMG/M
3300031824|Ga0307413_10996764Not Available718Open in IMG/M
3300031852|Ga0307410_10344583All Organisms → cellular organisms → Bacteria1189Open in IMG/M
3300031854|Ga0310904_10456200All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales849Open in IMG/M
3300031995|Ga0307409_101503318Not Available701Open in IMG/M
3300032074|Ga0308173_11860618Not Available567Open in IMG/M
3300033550|Ga0247829_10782663Not Available794Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere12.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere9.91%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil7.21%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere7.21%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere7.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil6.31%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.41%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.50%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere4.50%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere3.60%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere3.60%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.70%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.70%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil1.80%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.80%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere1.80%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere1.80%
Switchgrass RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere1.80%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300001431Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemlyEnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005335Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005354Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaGHost-AssociatedOpen in IMG/M
3300005356Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005365Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaGEnvironmentalOpen in IMG/M
3300005366Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaGHost-AssociatedOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005457Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaGHost-AssociatedOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005617Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300009148Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300013306Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013308Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaGHost-AssociatedOpen in IMG/M
3300014325Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaGHost-AssociatedOpen in IMG/M
3300014745Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaGHost-AssociatedOpen in IMG/M
3300014968Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018432Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 550 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300025290Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with spike-in - S5Host-AssociatedOpen in IMG/M
3300025315Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)Host-AssociatedOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025904Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025919Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025920Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025925Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025937Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026067Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028592Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30EnvironmentalOpen in IMG/M
3300028596Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031824Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - DK15-O-2Host-AssociatedOpen in IMG/M
3300031852Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-3Host-AssociatedOpen in IMG/M
3300031854Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI1027J12803_10100312923300000955SoilMNYKADLDASDEGGEPVLDANYPPWGEPLYWEEFKAWASANIPEYSLAVIDEQVADPVTSAALQSYRAGRTATRFGHLPGTQGLADFRAWASANLHIGSKDPRGKEIAERAYLAGSLRRP
F14TB_10398321313300001431SoilVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVAAAALQCYRAGRTATRYGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQ*
Ga0062594_10020110813300005093SoilMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRCGHPAGTQGLMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH*
Ga0065715_1046265313300005293Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070676_1048311213300005328Miscanthus RhizosphereLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070690_10060021013300005330Switchgrass RhizosphereEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070670_10009043433300005331Switchgrass RhizosphereMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH*
Ga0070670_10107186113300005331Switchgrass RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLAEFRAWASSNVHIRSKDPRGKEIAER
Ga0070670_10210004113300005331Switchgrass RhizosphereEKADLDAANEGGEPVLDVNYAPGGEPLYWEEFKEWAAVNIPEYSLAVIDGQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070677_1022667723300005333Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070666_1026383023300005335Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070689_10202662513300005340Switchgrass RhizosphereEPVLDVNYPPGGEPLYWEEFKAWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070675_10047170523300005354Miscanthus RhizosphereMNNKADLDASDEGGSPVLDESYPPWGEPLYWEEFKEWASADIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTLGLGDFRAWASTNLHIRSKDPRGKEIAEQAYLAGSLKHP
Ga0070675_10215211113300005354Miscanthus RhizosphereMNGKTDLDASDKDGEPLLDVSYPPWGEPLYWDEFKDWASVDIPEYSLAVIDEQVADPVMAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVHIRSKDPRGK
Ga0070674_10001051653300005356Miscanthus RhizosphereMNEKSGLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070674_10023369923300005356Miscanthus RhizosphereMNNKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWALANIPEYSLAVIDEQVAEPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0070673_10032777423300005364Switchgrass RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVHIRSKD
Ga0070673_10116731223300005364Switchgrass RhizosphereMVGNSKARSQSRDEEVNRKAELDAADEGGEPLLDGNYPPRGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH*
Ga0070673_10134393813300005364Switchgrass RhizosphereMRVATLVSRTPCRAGTELNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0070688_10090346723300005365Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLQH*
Ga0070659_10036089723300005366Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRVGRTAARYAHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070663_10120222013300005455Corn RhizosphereVKMVGNSKARTQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQVKDPRGQEIAEHAFLAGSLKH*
Ga0070678_10111574923300005456Miscanthus RhizosphereMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQVKDPR
Ga0070662_10012291733300005457Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0070672_10027427923300005543Miscanthus RhizosphereLNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALPCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0070664_10015092733300005564Corn RhizosphereRDEEVNRKAELDAADEGGEPLLDRNYPPPGEPLYWEEFKEWAAVNIPDCSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH*
Ga0068852_10260773023300005616Corn RhizosphereMSGRNLRCWVDDMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVH
Ga0068859_10062818523300005617Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLQR*
Ga0068870_1106013823300005840Miscanthus RhizosphereLNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0068863_10116383523300005841Switchgrass RhizosphereLNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIR
Ga0068863_10151834823300005841Switchgrass RhizosphereMNEKSGLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0097621_10097894413300006237Miscanthus RhizosphereRNRAKERTLPEGRHAHCRLELMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0097621_10152543623300006237Miscanthus RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWDEFKDWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTLGLADFRAWASTNLHIRSK
Ga0068865_10037289723300006881Miscanthus RhizosphereKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQIADPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP*
Ga0068865_10070263913300006881Miscanthus RhizosphereMNGKTDLDASDKDGEPLLDVSYPPWGEPLYWDEFKAWTSANIPEYSLAVSDEQVVDPVTSAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHKGQRT
Ga0068865_10075740413300006881Miscanthus RhizosphereTALLRNRAKERTLPEGRHAHCRLELMNEKSDLDAANEGGEPVLDVNYPPGGEPLYWEEFKAWAAVNIPEYSLAVIDEQVADPVTAAALQCYRVGRTAARYAHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0105243_1106595623300009148Miscanthus RhizosphereLFRPSLDAAKEGGEPVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0105241_1077892523300009174Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPGGEPLYWEEFKAWAAVNIPEYSLAVIDEQVADPVTAAALQCYRVGRTAARYAHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0105248_1001870353300009177Switchgrass RhizosphereLNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0105248_1262191713300009177Switchgrass RhizosphereMNEKSDLDAANEGGAPVLDVNYPPEGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTSAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIR
Ga0105238_1067807913300009551Corn RhizosphereMNEKSGLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0105249_1007511343300009553Switchgrass RhizosphereMNGKTDLDASDKDGEPLLDVSYPPWGEPLYWDEFKAWTSANIPEYSLAVSDEQVVDPVTSAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQP
Ga0105249_1017684113300009553Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARFGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0105249_1132196613300009553Switchgrass RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVTAAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIKSKDPRAKEIAERGYFAGSLKQP
Ga0134124_1143759813300010397Terrestrial SoilMNEKSDLDAANEGGEPVLDVNYPPGGEPLYWEEFKAWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0134121_1021810933300010401Terrestrial SoilLELMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVVDEQIADPVTAAALQSYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0105246_1040983123300011119Miscanthus RhizosphereVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0164300_1095815813300012951SoilAGCPFDRMNDKAEMDAADEGGKPVLDANYPPWHEPLYWEEFKAWAEVNIPEYSLAVIDEQVADPVAAAALQCYRAGRTATRYGHPAGTQGLADFRAWASTNLRIRSKDPRGKEIAEHAYLAGSLKQ*
Ga0164299_1075444513300012958SoilEMDAADEGGKPVRDANYPPWHEPLYWEEFKAWAEVNIPEYSLAVIDEQVADPVAAAALHCDRAGRTATRYGHPAGTQGLADFRAWASTNLRIRSKDPRGKEIAEHAYLAGSLKQ*
Ga0164299_1101407813300012958SoilGDRGLIKKYTPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0164305_1051578423300012989SoilMNDKAEMDAADEGGKPMLDANYPPWHEPLYWEEFKAWAEVNIPEYSLAVIDEQVADPVAAAALQCYRAGRTATRYGHPAGTQGLADFRAWASTNLRIRSKDPRGKEIAEHAYLAGSLKQ*
Ga0157374_1075996313300013296Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0163162_1092457623300013306Switchgrass RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHSRGTQGLADFRAWATSNLHLRSKDPRGKEIAER
Ga0157372_1259620113300013307Corn RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWEEFKAWASANIPEYSLAVIDEHVADPIMAAALQSYRAGRTATRFGYPAGTQGLADFRVWASTNLHIKSKDPRAKEIAERGYFAGSLKQP
Ga0157375_1011070313300013308Miscanthus RhizosphereVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH*
Ga0157375_1246738923300013308Miscanthus RhizosphereSLWQRSTMSGRNLRCWVDDMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHSRGTQGLADFRAWATSNLHLRSKDPRGKEIAEQAYLAGSLKHP*
Ga0163163_1211474413300014325Switchgrass RhizosphereSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0163163_1250366023300014325Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGK
Ga0157377_1119450213300014745Miscanthus RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVHIRSKDPRGKEIAERAYLAG
Ga0157379_1141833613300014968Switchgrass RhizosphereMNGKTDLDASDKDGEPLLDVSYPPWGEPLYWDEFKAWTSANIPEYSLAVSDEQVVDPVTSAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0132258_1277683723300015371Arabidopsis RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYSHPGGTQGLVDYRAWASSNVHIRSKDPRGKEIAERAYLAGSLKHP
Ga0132255_10250380113300015374Arabidopsis RhizosphereMKEKSDLDAANEGGAPVLDVNYPPEGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH*
Ga0163161_1017098513300017792Switchgrass RhizosphereTALLRNRAKERTLPEGRHAHCRLELMNEKSDLDAANEGGEPVLDVNYPPGGEPLYWEEFKAWAAVNIPEYSLAVIDEQVADPVTAAALQCYRVGRTAARYAHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0163161_1029950713300017792Switchgrass RhizosphereMNEKSGLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFL
Ga0163161_1051792523300017792Switchgrass RhizosphereLNSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH
Ga0163161_1081198913300017792Switchgrass RhizosphereADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0190275_1146343213300018432SoilVNRKAELDAADEGGEPLLDGNYQPRGEPLYWEEFKEWAAVNIPDYSLAVIENQVADPVVQAALQSYRAGRTATRYGHPAGTQGLVDFRTWASTNLHIRSNDPRGEEIAEHAFLAGSLKH
Ga0190274_1286800813300018476SoilKMVGNSKARSQSRDEEVNRKAELDAADEGGEPLLDGNYPPRGEPLYWEEFKEWAAVNIPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQGLMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0190271_1317545713300018481SoilEELNRKAELDAADEGGEPLLDRNYPPRDEPLYWEEFKEWAAVNVPDYSLAVINNHVADPVMQAALQSYRAGRTATRYGHPAGTQGLMDFRTWASTELHIQAKDPRGQEIAEHAFLAGSLK
Ga0207673_105335513300025290Corn, Switchgrass And Miscanthus RhizosphereRLELMNEKSDLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRVGRTAARYAHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207697_1005443323300025315Corn, Switchgrass And Miscanthus RhizosphereMTEKSGLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207682_1002064033300025893Miscanthus RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0207682_1007757623300025893Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLTVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207642_1007342313300025899Miscanthus RhizosphereMNEKSDLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207647_1016773813300025904Corn RhizospherePPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207643_1086483213300025908Miscanthus RhizosphereGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKEWAAVNIPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0207662_1019627623300025918Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207657_1087296713300025919Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEEFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207649_1093352823300025920Corn RhizosphereMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRCGHPAGTQGLMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0207681_1033804513300025923Switchgrass RhizosphereGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0207681_1053531013300025923Switchgrass RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207681_1083912423300025923Switchgrass RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVTAAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQP
Ga0207694_1030637113300025924Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEKVADPVTAAALQSYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLQH
Ga0207650_1109592313300025925Switchgrass RhizosphereMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0207701_1002589773300025930Corn, Switchgrass And Miscanthus RhizosphereMNNKADLDASDEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVTAAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQP
Ga0207701_1070671823300025930Corn, Switchgrass And Miscanthus RhizosphereRKAELDAADEGGEPLLDGNYPPRGEPLYWEEFKEWAAVNIPDYSLAVINNQVADPVMQAALQSYRAGRTATRYGHPAGTQALMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0207669_1036479513300025937Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLQR
Ga0207691_1134166023300025940Miscanthus RhizosphereMNDKADLDASDEGGLPVLDESYPPWGEPLYWDEFKDWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTLGLADFRAWASTNLHIRSKDPRGKEIAERAYLAGSLKRP
Ga0207711_1020072313300025941Switchgrass RhizosphereEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH
Ga0207679_1027120423300025945Corn RhizosphereVKMVGNSKARSQPRDEEVNRKAELDAADEGSEPLLDRDYPPAGEPLYWEEFKDWAAVNNPDYSLAVINNQVADPVMQAALQSYRAGRTATRCGHPAGTQGLMDFRTWASTNLHIQAKDPRGQEIAEHAFLAGSLKH
Ga0207651_1046226913300025960Switchgrass RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVHIRSKDPRGKEIAERAYLAGSLKHL
Ga0207651_1195385813300025960Switchgrass RhizosphereSKAELDAADEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPKGKEIAEHGFLAGSLRH
Ga0207678_1088992223300026067Corn RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAEVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207641_1150541313300026088Switchgrass RhizosphereMNEKSGLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0207648_1006769713300026089Miscanthus RhizosphereMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVMAAALQSYRAGRTATRFGHPPGTQGLADFRAWASTNLHIRSKDARGKEIAEHAYLAGSLKQP
Ga0207648_1064666513300026089Miscanthus RhizosphereMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSL
Ga0268266_1115501413300028379Switchgrass RhizosphereRHAHCRLELMNEKADLDAANEGGEPVLDVNYPPRGEPLYWEGFKEWAAVNIPEYSLAVIDEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRH
Ga0268265_1154778523300028380Switchgrass RhizosphereEGGLPVLDESYPPWGEPLYWEEFKEWASANIPEYSLAVIDEQVAEPVTAAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQP
Ga0247822_1017638113300028592SoilRHAHCGLDLMNEKADLDAANEGGEPVLDVNYPPGGEPLYWEEFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPRGKEVAEHGFLAGSLRH
Ga0247821_1071722813300028596SoilMNEKADLDAANEGGEPVLDVNYPPGGEPLYWEEFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLADFHAWAATNLHIRSKDPRGKEVAEHAFLAGSLRR
Ga0247824_1069254013300028809SoilGRHAHCRLDLMNEKADLDAADEGGEPVLDVNYPPGGEPLYWEEFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLQIRSKDPRGKEIAEHGFLAGSLRH
Ga0170824_10898209733300031231Forest SoilMNDKADLDASDEGGEPFLDMNYPPSGEPLYWEEFKGWASANIPEYSLAVIDEQVADPVTASALQSYRAGRTATRFGYPAGTQGLADFRAWASTSLHIRLKDPRGKEIAERAYLSGSLRQP
Ga0307506_1046086113300031366SoilMNDKADLDAADEGGEPFLDANYPPWGEPLYWEEFKEWAAVDIPQYSLAVIDEQLADPVTQAALQSYRAGRTATHYGHPAGTLGLKDFRAWAKTNLHIRSKDPRGKEVAEQAFL
Ga0310888_1058554013300031538SoilEGGEPVLDVNYPPGGEPLYWEEFKEWAAVNIPEYSLAVIDEQVAEPVTAAALQSYRAGRTATRFGHPAGTQGLADFRAWASTNLHIRSKDPRGKEIAEHAYLAGSLKQP
Ga0307468_10131161313300031740Hardwood Forest SoilGGEPFLDMNYPPSGEPLYWEEFKAWASANIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRFGYPAGTQGLADFRAWASTSLHIRSKDPRGKEIAERAYLAGSLRQP
Ga0307413_1099676423300031824RhizosphereVKRKAELDAADEGGEPLLDANYPPPGEPLYWAEFRDWAAVNMPEYSLAVIGNQVADPVVQAALQSYRAGRTATRYGHPAGTRGLVDFRTWASTHLHIRSKDPRGQEIAEHAFLAGSLKHN
Ga0307410_1034458323300031852RhizosphereMAATPRQDSNRGEEVKRRAELDAADEGGEPLLDANYPPPGEPLYWQEFKEWAAVNIPEYSLAVVDGQVADPVMQAALQSYRAGRTATRYGHPAGTRGLVDFRTWASTHLHIRSKDPRGQE
Ga0310904_1045620023300031854SoilMHDKADLDASDEGGSPLLDESYPPWGEPLYWEEFKEWASVDIPEYSLAVIDEQVADPVTAAALQSYRAGRTATRYGHPAGTQGLVDFRAWASSNVHI
Ga0307409_10150331823300031995RhizosphereVKRKAELDAADEGGEPLLDANYPPPGEPLYWQEFKEWAAVNIPEYSLAVVDGQVADPVMQAALQSYRAGRTATRYGHPAGTRGLVDFRTWASTHLHIRSKDP
Ga0308173_1186061813300032074SoilGEGGTPVLDESYPPRGEPLYWEEFKAWASANIPEYSLAVIDEHVADPITAAALQSYRAGRTATRFGYPAGTQGLADFRAWASTNLHIKSKDPRAKEIAERGYFAGSLKQP
Ga0247829_1078266313300033550SoilMNEKADLDAANEGGEPVLDVNYPPGGEPLYWEEFKEWAAVNIPEYSLAVINEQVADPVTAAALQCYRAGRTAARYGHPVGTEGLVDFHAWAATNLHIRSKDPRGKEVAEHGFLAGSLRH


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.