Metagenome / Metatranscriptome Family F085828

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085828
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	132 residues
Representative Sequence	ADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAALERTWYRANTELRRARRQAETDTDQALDRYIDSLGAPSRPELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG
Number of Associated Samples	73
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	1.82 %
% of genes near scaffold ends (potentially truncated)	95.50 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	63
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (53.153 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (10.811 % of family members)
Environment Ontology (ENVO)	Unclassified (64.865 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (80.180 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 57.05% β-sheet: 1.28% Coil/Unstructured: 41.67%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF08543	Phos_pyr_kin	6.31
PF13620	CarboxypepD_reg	3.60
PF13520	AA_permease_2	3.60
PF00072	Response_reg	2.70
PF10459	Peptidase_S46	2.70
PF02652	Lactate_perm	2.70
PF03466	LysR_substrate	2.70
PF03328	HpcH_HpaI	1.80
PF04909	Amidohydro_2	1.80
PF01261	AP_endonuc_2	1.80
PF13490	zf-HC2	1.80
PF14294	DUF4372	0.90
PF13432	TPR_16	0.90
PF03551	PadR	0.90
PF01055	Glyco_hydro_31	0.90
PF04542	Sigma70_r2	0.90
PF00117	GATase	0.90
PF00005	ABC_tran	0.90
PF02445	NadA	0.90
PF13424	TPR_12	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0351	Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase	Coenzyme transport and metabolism [H]	6.31
COG0524	Sugar or nucleoside kinase, ribokinase family	Carbohydrate transport and metabolism [G]	6.31
COG2240	Pyridoxal/pyridoxine/pyridoxamine kinase	Coenzyme transport and metabolism [H]	6.31
COG2870	ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase	Cell wall/membrane/envelope biogenesis [M]	6.31
COG1620	L-lactate permease	Energy production and conversion [C]	2.70
COG0469	Pyruvate kinase	Carbohydrate transport and metabolism [G]	1.80
COG2301	Citrate lyase beta subunit	Carbohydrate transport and metabolism [G]	1.80
COG3836	2-keto-3-deoxy-L-rhamnonate aldolase RhmA	Carbohydrate transport and metabolism [G]	1.80
COG0379	Quinolinate synthase	Coenzyme transport and metabolism [H]	0.90
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	0.90
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	0.90
COG1501	Alpha-glucosidase/xylosidase, GH31 family	Carbohydrate transport and metabolism [G]	0.90
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	0.90
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.90
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.90
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.90
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
All Organisms	root	All Organisms	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
cellular organisms	root	All Organisms → cellular organisms	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	46.85 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	27.03 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1.80 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	10.81 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.60 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	0.90 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.90 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	10.81 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.90 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	0.90 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	5.41 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	1.80 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %
Oscillatoriophycideae	subclass	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Solibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter	4.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
unclassified Bryobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae	1.80 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.90 %
Oscillatoriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Candidatus Solibacter usitatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4.50 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.80 %
Coleofasciculaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae	0.90 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.80 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.90 %
Allocoleopsis	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Allocoleopsis	0.90 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.80 %
Allocoleopsis franciscana	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Allocoleopsis → Allocoleopsis franciscana	0.90 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.90 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	53.15 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	3.60 %
Bryobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1.80 %
Allocoleopsis franciscana PCC 7113	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Allocoleopsis → Allocoleopsis franciscana → Allocoleopsis franciscana PCC 7113	0.90 %
Candidatus Sulfopaludibacter sp. SbA3	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	0.90 %
Candidatus Solibacter usitatus Ellin6076	isolate	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	0.90 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459011\|GKWS7RC01B1U30	Not Available	562	Open in IMG/M
3300005290\|Ga0065712_10282568	Not Available	890	Open in IMG/M
3300005330\|Ga0070690_101054870	Not Available	643	Open in IMG/M
3300005334\|Ga0068869_101223275	All Organisms → cellular organisms → Bacteria → Acidobacteria	661	Open in IMG/M
3300005338\|Ga0068868_100780318	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	861	Open in IMG/M
3300005343\|Ga0070687_100496267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Oscillatoriophycideae → Oscillatoriales → Coleofasciculaceae → Allocoleopsis → Allocoleopsis franciscana → Allocoleopsis franciscana PCC 7113	821	Open in IMG/M
3300005354\|Ga0070675_100212009	Not Available	1684	Open in IMG/M
3300005367\|Ga0070667_101148246	Not Available	727	Open in IMG/M
3300005466\|Ga0070685_10908464	All Organisms → cellular organisms → Bacteria	656	Open in IMG/M
3300005466\|Ga0070685_10995145	All Organisms → cellular organisms → Bacteria	629	Open in IMG/M
3300005543\|Ga0070672_101677920	Not Available	571	Open in IMG/M
3300005544\|Ga0070686_100722033	Not Available	797	Open in IMG/M
3300005544\|Ga0070686_101043168	Not Available	673	Open in IMG/M
3300005564\|Ga0070664_102002481	Not Available	550	Open in IMG/M
3300005577\|Ga0068857_102304885	Not Available	529	Open in IMG/M
3300005617\|Ga0068859_100431201	Not Available	1415	Open in IMG/M
3300005618\|Ga0068864_102133718	Not Available	567	Open in IMG/M
3300005841\|Ga0068863_100879684	All Organisms → cellular organisms → Bacteria	895	Open in IMG/M
3300005841\|Ga0068863_101916659	Not Available	603	Open in IMG/M
3300005842\|Ga0068858_101158129	All Organisms → cellular organisms → Bacteria → Acidobacteria	760	Open in IMG/M
3300005842\|Ga0068858_102007250	Not Available	572	Open in IMG/M
3300006162\|Ga0075030_100227616	All Organisms → cellular organisms → Bacteria	1498	Open in IMG/M
3300006237\|Ga0097621_101588859	Not Available	622	Open in IMG/M
3300006358\|Ga0068871_100260469	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300006573\|Ga0074055_11654417	Not Available	552	Open in IMG/M
3300006575\|Ga0074053_11979037	Not Available	520	Open in IMG/M
3300009098\|Ga0105245_11167290	All Organisms → cellular organisms → Bacteria → Acidobacteria	817	Open in IMG/M
3300009098\|Ga0105245_12580420	Not Available	561	Open in IMG/M
3300009101\|Ga0105247_11518276	Not Available	547	Open in IMG/M
3300009148\|Ga0105243_11119403	All Organisms → cellular organisms → Bacteria → Acidobacteria	797	Open in IMG/M
3300009148\|Ga0105243_12495494	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	556	Open in IMG/M
3300009176\|Ga0105242_10710419	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	985	Open in IMG/M
3300009176\|Ga0105242_11907449	Not Available	635	Open in IMG/M
3300009177\|Ga0105248_10193522	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	2291	Open in IMG/M
3300009177\|Ga0105248_10600570	Not Available	1242	Open in IMG/M
3300009177\|Ga0105248_10642888	Not Available	1197	Open in IMG/M
3300009177\|Ga0105248_10943392	Not Available	974	Open in IMG/M
3300009177\|Ga0105248_11828250	Not Available	689	Open in IMG/M
3300009553\|Ga0105249_11989337	Not Available	654	Open in IMG/M
3300010362\|Ga0126377_11623916	All Organisms → cellular organisms → Bacteria → Acidobacteria	721	Open in IMG/M
3300010375\|Ga0105239_13096160	Not Available	542	Open in IMG/M
3300010375\|Ga0105239_13375252	Not Available	519	Open in IMG/M
3300010397\|Ga0134124_10909109	All Organisms → cellular organisms → Bacteria → Acidobacteria	887	Open in IMG/M
3300010400\|Ga0134122_12192659	Not Available	596	Open in IMG/M
3300010401\|Ga0134121_12392455	Not Available	569	Open in IMG/M
3300011119\|Ga0105246_10285856	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	1325	Open in IMG/M
3300011119\|Ga0105246_11055048	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus → Candidatus Solibacter usitatus Ellin6076	739	Open in IMG/M
3300011444\|Ga0137463_1373402	Not Available	509	Open in IMG/M
3300012924\|Ga0137413_11723947	All Organisms → cellular organisms → Bacteria → Acidobacteria	515	Open in IMG/M
3300012957\|Ga0164303_10824946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	641	Open in IMG/M
3300012960\|Ga0164301_10948088	All Organisms → cellular organisms → Bacteria	672	Open in IMG/M
3300012960\|Ga0164301_11034105	Not Available	648	Open in IMG/M
3300012988\|Ga0164306_11103620	Not Available	660	Open in IMG/M
3300013296\|Ga0157374_10876079	All Organisms → cellular organisms → Bacteria	915	Open in IMG/M
3300013306\|Ga0163162_10644068	All Organisms → cellular organisms → Bacteria	1184	Open in IMG/M
3300013306\|Ga0163162_10677579	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300013306\|Ga0163162_10720964	All Organisms → cellular organisms → Bacteria → Acidobacteria	1118	Open in IMG/M
3300013306\|Ga0163162_11474446	Not Available	775	Open in IMG/M
3300013306\|Ga0163162_12304612	Not Available	619	Open in IMG/M
3300013308\|Ga0157375_11364127	All Organisms → cellular organisms → Bacteria	835	Open in IMG/M
3300013308\|Ga0157375_13195779	Not Available	546	Open in IMG/M
3300014325\|Ga0163163_10016369	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	6887	Open in IMG/M
3300014325\|Ga0163163_10029628	All Organisms → cellular organisms → Bacteria → Acidobacteria	5268	Open in IMG/M
3300014325\|Ga0163163_10259795	All Organisms → cellular organisms → Bacteria	1788	Open in IMG/M
3300014325\|Ga0163163_11219937	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300014326\|Ga0157380_11642889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	699	Open in IMG/M
3300014745\|Ga0157377_11778926	Not Available	500	Open in IMG/M
3300014968\|Ga0157379_10149562	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → unclassified Bryobacteraceae → Bryobacteraceae bacterium	2106	Open in IMG/M
3300014968\|Ga0157379_10724851	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300014968\|Ga0157379_12002049	Not Available	572	Open in IMG/M
3300014969\|Ga0157376_11605969	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	685	Open in IMG/M
3300014969\|Ga0157376_11703164	Not Available	666	Open in IMG/M
3300014969\|Ga0157376_11889934	Not Available	634	Open in IMG/M
3300015371\|Ga0132258_10225000	Not Available	4567	Open in IMG/M
3300015371\|Ga0132258_10732077	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	2491	Open in IMG/M
3300015371\|Ga0132258_13628444	Not Available	1055	Open in IMG/M
3300015372\|Ga0132256_101825184	Not Available	716	Open in IMG/M
3300015372\|Ga0132256_102901484	All Organisms → cellular organisms → Bacteria	576	Open in IMG/M
3300015373\|Ga0132257_103222547	Not Available	594	Open in IMG/M
3300015374\|Ga0132255_100469477	All Organisms → cellular organisms → Bacteria → Acidobacteria	1845	Open in IMG/M
3300015374\|Ga0132255_102608518	Not Available	772	Open in IMG/M
3300015374\|Ga0132255_103340993	Not Available	683	Open in IMG/M
3300017792\|Ga0163161_11754792	Not Available	551	Open in IMG/M
3300018081\|Ga0184625_10441991	Not Available	667	Open in IMG/M
3300018083\|Ga0184628_10041685	All Organisms → cellular organisms → Bacteria → Acidobacteria	2306	Open in IMG/M
3300018083\|Ga0184628_10168814	All Organisms → cellular organisms → Bacteria → Acidobacteria	1141	Open in IMG/M
3300021082\|Ga0210380_10052958	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300021860\|Ga0213851_1603989	Not Available	527	Open in IMG/M
3300021861\|Ga0213853_11285270	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300022756\|Ga0222622_11082997	Not Available	589	Open in IMG/M
3300025581\|Ga0208355_1075919	Not Available	754	Open in IMG/M
3300025914\|Ga0207671_11263586	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA3	576	Open in IMG/M
3300025921\|Ga0207652_11790872	Not Available	519	Open in IMG/M
3300025926\|Ga0207659_10137037	Not Available	1896	Open in IMG/M
3300025930\|Ga0207701_10260610	All Organisms → cellular organisms → Bacteria	1511	Open in IMG/M
3300025934\|Ga0207686_10693187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	809	Open in IMG/M
3300025935\|Ga0207709_10777973	All Organisms → cellular organisms → Bacteria	771	Open in IMG/M
3300025936\|Ga0207670_10038424	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	3126	Open in IMG/M
3300025936\|Ga0207670_10409830	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1085	Open in IMG/M
3300025937\|Ga0207669_11580393	Not Available	560	Open in IMG/M
3300025941\|Ga0207711_11742750	Not Available	566	Open in IMG/M
3300025942\|Ga0207689_10831565	All Organisms → cellular organisms → Bacteria	779	Open in IMG/M
3300025986\|Ga0207658_11969189	Not Available	532	Open in IMG/M
3300026088\|Ga0207641_10029145	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus	4564	Open in IMG/M
3300026088\|Ga0207641_10178118	All Organisms → cellular organisms → Bacteria → Acidobacteria	1945	Open in IMG/M
3300026088\|Ga0207641_10504477	All Organisms → cellular organisms → Bacteria	1175	Open in IMG/M
3300026088\|Ga0207641_11666911	Not Available	640	Open in IMG/M
3300026095\|Ga0207676_10292938	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	1483	Open in IMG/M
3300026095\|Ga0207676_10813340	Not Available	912	Open in IMG/M
3300034149\|Ga0364929_0248823	Not Available	598	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	70.27%
Environmental	Environmental	29.73%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	70.27%
Terrestrial	Environmental → Terrestrial	21.62%
Aquatic	Environmental → Aquatic	8.11%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	37.84%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.03%
Soil	Environmental → Terrestrial → Soil	20.72%
Sediment	Environmental → Aquatic → Sediment	5.41%
Roots	Host-Associated → Plants → Roots	5.41%
Freshwater	Environmental → Aquatic → Freshwater	2.70%
Floodplain	Environmental → Terrestrial → Floodplain	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	29.73%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	19.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	8.11%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	5.41%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	5.41%
Sediment	Environmental → Aquatic → Freshwater → Sediment	2.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	29.73%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	19.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.91%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.11%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.11%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	7.21%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	5.41%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	5.41%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.80%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.90%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	10.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	9.01%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	8.11%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	7.21%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	6.31%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	3.60%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.60%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.70%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.70%
Watersheds	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.90%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.90%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.90%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.90%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459011	Grass soil microbial communities from Rothamsted Park, UK - July 2009 indirect Gram positive lysis 0-10cm	Environmental	Open in IMG/M
3300005290	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006237	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006573	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006575	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300011444	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT800_2	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300021082	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_coex redo	Environmental	Open in IMG/M
3300021860	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2014 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021861	Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2016 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025581	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 210-3 deep-072012 (SPAdes)	Environmental	Open in IMG/M
3300025914	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
F64_01145560	2170459011	Grass Soil	HRDFRPQSPSETFHVDTMLRADWQKLRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLVRVQRQIAAFERTWYRANTELRRARHQAEAATDHALDRYIDSLGSPSRAELASFPPSANTTPPATNSTPNSTNDWPPTDEKTGRPLYFVG
Ga0065712_102825682	3300005290	Miscanthus Rhizosphere	PGASLAAALLSDSPASKLLARVQRQIAAFERTWYRANTELRRARRRAEAGTDQALDRYIDSLGAPSRPELASFPQSPNTAPSTTKSTRDWPPTDEKTGRPLYFVG*
Ga0070690_1010548701	3300005330	Switchgrass Rhizosphere	HVDTMLRADWQKRRLQRVEADLHRTLLAETPGATLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAAVDQAMDRYLDSLHSPSAAELASLHQSVNHYLPSPQPATKSAPAWPPTDEKTGRPLYFVG*
Ga0068869_1012232752	3300005334	Miscanthus Rhizosphere	QKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSRAELASFPQFANTPKPAPNSSSDWPPTDEKTGRPLYFVG*
Ga0068868_1007803181	3300005338	Miscanthus Rhizosphere	QSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGSPSPMELASFPQSANSDLPASQPTPDSTRDWPPTDEKTGRPLYFVG*
Ga0070687_1004962671	3300005343	Switchgrass Rhizosphere	YHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARSQAEAETDNALDRFIDSLGAPSRPELAPFPQSANTTQSAPKSAPNSSRDWPPTDEKTGRPLYFVG*
Ga0070675_1002120094	3300005354	Miscanthus Rhizosphere	SETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQADTDTDQALDRYIDSLSSPSPMELASFPQSANTPQTAPDSTRDWPPTDEKTGKPLYFVG*
Ga0070667_1011482461	3300005367	Switchgrass Rhizosphere	PQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARSQAEAETDNALDRFIDSLGAPSRPELAPFPQSPNTTQPAPKSARDWPPTDEKTGKPLYFVG*
Ga0070685_109084641	3300005466	Switchgrass Rhizosphere	LLAETPGASLAAALLSDTPAAKLLARVQRQIAAFGRTWYRANTELRRTRRQAETDTDQALDRYIDSLTPPLPGELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0070685_109951451	3300005466	Switchgrass Rhizosphere	AETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRAPQQAEAETDHALDRYIESLGAPSRAELASFPDSTNTTQPAPKSTRDWPPTDEKGGRPLYFVG*
Ga0070672_1016779201	3300005543	Miscanthus Rhizosphere	HRDFRPQSPSETFHVDTMLRVDWQKRRLQRVEADLHRVLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAETDTDQALERYIDSLGAPSRPELASFPQSANTTQTAPKSTRDWPPTDEKTGRPLYFVG*
Ga0070686_1007220331	3300005544	Switchgrass Rhizosphere	EYHPQSPSESFHVDAMLRADWQKRRLQSVEGDLYRSIIAESSNATLIAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRAREQAEPAFDRTVEHYLDFLSARPAPGELASFRQSAGNGRPDSPAAPSATPDWPPTDPKTGRPAFFVG*
Ga0070686_1010431681	3300005544	Switchgrass Rhizosphere	PESPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGATLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEAGTDRTLERYIDSLGAPTRPELASFPQSANTAPSTPKAARAWPPTDEKTGRPLYFVG*
Ga0070664_1020024811	3300005564	Corn Rhizosphere	QSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHALDRYIDSLGAPTRPELASFPQSANSAPATPKAARDWPPTDEKTGRPLYFVG*
Ga0068857_1023048851	3300005577	Corn Rhizosphere	DYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLSSPSPMELASFPQSANTTPPAPKSARDWPPTDEKTGRPLYFVG*
Ga0068859_1004312012	3300005617	Switchgrass Rhizosphere	MLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDHALNRYIDSLGAPTRAELASFPQSENTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0068864_1021337181	3300005618	Switchgrass Rhizosphere	DTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLSSPSPMELASFPQSANTTPPAPKSAREWPPTDEKTGRPLYFVG*
Ga0068863_1008796842	3300005841	Switchgrass Rhizosphere	LAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAEADTDHALESYIDSLGAPTRPELASFPQSANTPQPAPNSTRDWPPTDEKTGRPLFFVG*
Ga0068863_1019166591	3300005841	Switchgrass Rhizosphere	DPADYDALVAAYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPDASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAAVDQAMDRYLDSLHSPSPSELASLHQTVHHYNPSLEPAPKSSRDWPPTDEKTGKPLYFVG*
Ga0068858_1011581292	3300005842	Switchgrass Rhizosphere	SPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHVLDRFIDSLGAPTRPKLASFPDSANTTQPTPKSTPNPKSDWPPTDEKTGRPLYFVG*
Ga0068858_1020072501	3300005842	Switchgrass Rhizosphere	ALVADYHRDFRPQSPSEIFHVDTMLRADWQKRRLQRVEADLHRPLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLSSPSPMELASFPQSANTTPPAPKSARDWPPTDKKTGRPLYFVG*
Ga0075030_1002276162	3300006162	Watersheds	PQSPSESFHVETMLRADWQKRRLERVEAHLYRTVLTEAPGASLAAALLSDSPAARLLARTQRQIAAFERTWHRANTELRRARQHDGSADEKAFDKYLDILCAKPAPDVELASFPSSVASSKDWPPIDEKTGRPSYFVG*
Ga0097621_1015888591	3300006237	Miscanthus Rhizosphere	FRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGSPSPMELASFPQSANSTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0068871_1002604694	3300006358	Miscanthus Rhizosphere	VDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAALERTWYRANTELRRARRQAETDTDQALDRYIDSLGAPSRPELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0074055_116544171	3300006573	Soil	VADYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLTETPGASLAAALLSDSPAAKLLARIQRQIAAFERTWYRANTELRRARQQSEAATDQSMDRYLDSLHSPSPSELASLHQSVNHYLPSPQPAPDSAPAWPPTDEKTGRPLYFVG*
Ga0074053_119790371	3300006575	Soil	PQSPSETFHVDAMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDNALDRYIDSLGAPSRPELASFPQSANTAPPTT*
Ga0105245_111672902	3300009098	Miscanthus Rhizosphere	LTETPGASLAAALLSDSPAVKLLARVQRQIAAFERTWYRANTELRRARRQGEADTDHALDRYIDSLGAPSRAELASFPDSANSGPTGARPAPKSTPNPTNDWPPTDEKTGRPLYFVG*
Ga0105245_125804201	3300009098	Miscanthus Rhizosphere	EDPADYDALVAAYHRDFRPESPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAEADTDNALERYIDGLGAPSRAELASFPQSANSGQPGAQPTPKSTRDWPPTDEKTGRPLYFVG*
Ga0105247_115182761	3300009101	Switchgrass Rhizosphere	AETPGASLATALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSRPELASFPQSPNTAPSTPKSTRDWPPTDEKTGRPLYFVG*
Ga0105243_111194032	3300009148	Miscanthus Rhizosphere	FHVDTMLRADWQKRRLQRVETDLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEAGIDHALDRYIDSLGAPTRPELASFPQSANTAPPTPKSTTNPKSDWPPTDEKTGRPLYFVG*
Ga0105243_124954941	3300009148	Miscanthus Rhizosphere	GASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGSPSPMELASFPQSATSTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0105242_107104192	3300009176	Miscanthus Rhizosphere	ALAADYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLRRTLLAETPGASLAASLLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRRAEAETDQALDRYIDSLGAPTRPELASFRESANTTPSAPKSTPNPTNDWPPTDEKTGRPLYFVG*
Ga0105242_119074491	3300009176	Miscanthus Rhizosphere	EDPADYDALVTAYNRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEADTDDALDRYIDSLGAPTRPELASFPQSANTAPPTTKSTANPKSD*
Ga0105248_101935221	3300009177	Switchgrass Rhizosphere	PQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAEIPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGSPSPMELASFPQSANSDLPASQPTPDSTRDWPPTDEKTGRPLYFVG*
Ga0105248_106005703	3300009177	Switchgrass Rhizosphere	AETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTEFRRARRQAETDTDHALDRYIDSLGAPSPMELASFPQSANTPQTAPDSTRDWPPTDEKTGKPLYFVG*
Ga0105248_106428882	3300009177	Switchgrass Rhizosphere	LRADWQKRPLQRGEADLHRTLLADTPGASLAAALLSASPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDHALNRYIDSLGAPTRAELASFPQSENTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0105248_109433921	3300009177	Switchgrass Rhizosphere	VEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARSQAEAETDNALDRFIDSLGAPSRPELAPFPQSANTTQSAPKSAPNSSRDWPPTDEKTGRPLYFVG*
Ga0105248_118282501	3300009177	Switchgrass Rhizosphere	SLSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGATLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAAVDQAMDRYLDSLHSPSAAELASLHQSVNHYLPSPQPATKSAPAWPPTDEKTGRPLYLVG*
Ga0105248_129753531	3300009177	Switchgrass Rhizosphere	SDSPAAKLLARVQRQIAAFERTWYRANTELRRAREQAEPAIDRTVEHYLDFLSAKPAPGELASLRQSSNTSLPGAQTAPKSSRDWPPTDEKTGRPLFFVG*
Ga0105249_119893371	3300009553	Switchgrass Rhizosphere	TFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAETDTDQALDRYIDSLTPPLPGELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0126377_116239162	3300010362	Tropical Forest Soil	PADYGALAADYHRDFHPESPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHALDRYIDSLSSPSPMELASFPDSANTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0105239_130961601	3300010375	Corn Rhizosphere	HRTLLAETPGASLAAALLSDSPAAKHLARVQRQIAAFERTWYRANAELRRARRQAETDTDHALDRYIDSLGAPSPMELASFPQSANTTPSVPKSARDWPPTDEKTGRPLYFVG*
Ga0105239_133752521	3300010375	Corn Rhizosphere	AHYLDEYHPQSPSESFHVDAMLRADWQKRRLQSVEGDLYRSIIAESSNATLIAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRAREQAEPAIDRTVEHYLDFLSAKPAPGELASLRQSSNTSLPGAQTAPKSSRDWPPTDEKTGRPLYFVG*
Ga0134124_109091092	3300010397	Terrestrial Soil	RLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAGFERAWYRANTDLRRARRQAEADTDQALDRYIDSLGAPSRAELASFPQFANTPKPAPNSSSDWPPTDEKTGRPLYFVG*
Ga0134122_121926591	3300010400	Terrestrial Soil	WQKRRLQRVEADLHRTILAENPGASLASALLSDSPAAKLLIRIQRQIAAFERTWYRANTELRRARRQAEADTDQALERYIDSLGAPSRPELASFPQSANPTQPAPKSTRDWPPTDEKTGRPLFFVG*
Ga0134121_123924551	3300010401	Terrestrial Soil	RADWCKQRLQRFETDLIRKMLADAPGATIIDVILSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAATDQAMDRYLDSLHSPSPSELASLHQTVHHYNPSAEPAPKSSRDWPPTDEKTGKPLYFVG*
Ga0105246_102858562	3300011119	Miscanthus Rhizosphere	LHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARCQAEAGTDHALDRYIDSLGAPTRPELASFPPSPNTTQSAPKSTHDWPPTDEKTGRPLYFIG*
Ga0105246_110550482	3300011119	Miscanthus Rhizosphere	GASLAAALLSDSPAAKLLARVQRQIAALERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSPMELASFPQSANTTPSAPKSARDWPPTDEKTGRPLYFVG*
Ga0137463_13734021	3300011444	Soil	AYHRDFRPESPSETFHIDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEAGTDHALDRYIDSLSSPSPMELASFPQSANTTPPAPKSAPNPTSDWPPTDEKTGRPLYFVG*
Ga0137413_117239471	3300012924	Vadose Zone Soil	EADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARHHTEADTDHALNRYIDSLGSPSPRELASFPDSANTAPSTTNSTRDWPPTDEKTGRPLYFVG*
Ga0164303_108249461	3300012957	Soil	DWQKRRLQRVEADLHRTLLAETPGTSLAAALLSDSPAAKLLQRVQRQIAAFERTWYRANTELRRARLQAEAGTEHALDRYIDSLGAPSRTELASFPQSANTTQPTPKSTRDWPPIAEKTGRPLYFVG*
Ga0164301_109480882	3300012960	Soil	VEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAATDQAMDRYLDSLHSPSPSELASLHQTVHHYNSIPEPAPKSSRDWPPTDEKTGKPLYFVG*
Ga0164301_110341051	3300012960	Soil	ETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEAATDHALDRYIDSLGAPTRPELASFPQSANTTPPAPKSTPNPTNNWPPTDEKTGRPLYFVG*
Ga0164306_111036201	3300012988	Soil	FRPQTPSEIFHVDTMLRADWMKRRLQLVEADLYRTLLAETPGTSLAAALLSDSPAAKLLARTQRQIAAFERTWHRANNELRRSRAEAQADTEGSFEKYLDFLTARPAPGELASLRQSSNTSLPGAQTAPKSSRDWPPTDEKTGRPLFFVGCNPPNDCAYS*
Ga0157374_108760791	3300013296	Miscanthus Rhizosphere	LLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAETDTDHALDRYIDSLGAPSPMELASFPQSANTSPSAPKSARDWPPTDEKTGRPLYFVG*
Ga0163162_106440682	3300013306	Switchgrass Rhizosphere	ADYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDQALERYIDSLGAPSRPSELASFPQSTNTAQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0163162_106775791	3300013306	Switchgrass Rhizosphere	RTLLTETPGASLAAALLSESPAAKLLARVQRQIAAFERTWYRANTELRRARRRAEAGTDQALDRYIDSLGAPSRPELASFPQSPNTAPSTTKSTRDWPPTDEKTGRPLYFVG*
Ga0163162_107209642	3300013306	Switchgrass Rhizosphere	YQRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHVLDRFIDSLGAPTRPKLASFPDSANTTQPTPKSTPNPKSDWPPTDEKTGRPLYFVG*
Ga0163162_114744461	3300013306	Switchgrass Rhizosphere	PSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRTRSQAEAETDNALDRFIDSLGAPSRPELASFPQSANTTQSAPKSGPNSSRDWPPTDEKTGRPLYFVG*
Ga0163162_123046121	3300013306	Switchgrass Rhizosphere	TLLAETAGASLAAALLSDSPGAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDHVLDRYIDSLSSPSPMELASFPQSANTTPPAPKSARDWPPTDEKTGRPLYFVG*
Ga0157375_113641272	3300013308	Miscanthus Rhizosphere	TLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAATDQAMDRYLDSLHSPSPAELASLHQTVNHYVPSPEPAPKSTRDWPPTDEKTGKPLYFVG*
Ga0157375_131957791	3300013308	Miscanthus Rhizosphere	EALAAHYLEEYHPQSPSESFHVDAMLRADWQKRRLQAVEGDLYRSIIAESSNATLIAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRAREQAEPAIDRTVEHYLDFLSAKPAPGELASLRQSSNTSLPGAQTAPKSSRDWPPTDEKTGRPLFFVG*
Ga0163163_100163691	3300014325	Switchgrass Rhizosphere	SPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAAFLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRRAEAGTDQALDRYIDSLGAPSRPELASFPQSPNTAPSTTKSTRDWPPTDEKTGRPLYFVG*
Ga0163163_100296285	3300014325	Switchgrass Rhizosphere	RVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDNALERYIDGLGAPSRAELASFPQSANSGQPGAQPTPKSTRDWPPTDEKTGRPLYFVG*
Ga0163163_102597951	3300014325	Switchgrass Rhizosphere	SLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAAVDQAMDRYLDSLHSPSPSELASLHQTVNHYLPSPEPAPKSSPAWPPTDEKTGRPLYFVG*
Ga0163163_112199372	3300014325	Switchgrass Rhizosphere	SPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAAFLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQKSEAATDQAMDRYLDSLHSPSPSELASLHQTVHHYNPSPEPAPKSSRDWPPTDEKTGKPLYFVG*
Ga0157380_116428892	3300014326	Switchgrass Rhizosphere	DWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSRPELAPFPQSPNTTQPAPKSARDWPPTDEKTGKPLYFVG*
Ga0157377_117789261	3300014745	Miscanthus Rhizosphere	RPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHALDRYIDSLGSPSPMELASFPQSANSTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0157379_101495622	3300014968	Switchgrass Rhizosphere	DTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQLAAFERTWYRPTPDLRRARRQAEADTDHALDRYIDSLGAPSPMELASFPQSANTTPSAPKSAPKSTRDWPPTDEKTGRPLYFVG*
Ga0157379_107248512	3300014968	Switchgrass Rhizosphere	SLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDQALDRYIDSLTPPLPGELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0157379_120020491	3300014968	Switchgrass Rhizosphere	DFRPESPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTDLRRARRQAEADTDHALDRYIDSLGAPTRPELASFPDSANATQPAPKSTRDWPPTDEKTGRPLYFVG*
Ga0157376_116059691	3300014969	Miscanthus Rhizosphere	DWQKRRLQRVEADLHRTLLGETPGASLAAALLSESPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSRAELASFPQSANSGQPGAQPTPKSTRDWPPTDEKTGRPLYFVG*
Ga0157376_117031641	3300014969	Miscanthus Rhizosphere	QSPSESFHVDAMLRADWQKRRPQCVEGDLYRSIIAESSNATLIAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEAGTDQALERYIDSLGAPSPAELASFPDSADNTPPASKSTPNPTKDWPPTDEKTGRPLYFVG*
Ga0157376_118899341	3300014969	Miscanthus Rhizosphere	TLLTETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAEADTDNALDRYIESLGAPTRPELASFPQSANPTPLAPKSTPNPKSDWPPTDEKTGRPLYFVG*
Ga0132258_102250002	3300015371	Arabidopsis Rhizosphere	LHRTLLAETPGASLAAALLSDSPAAKLLQRVQRQIAAFERTWYRANTELRRARRHAEAGTDHALDRFIDSLGAPSPMELASFPQSTNTTPSAPKSTPNPTSDWPPTDEKTGRPLYFVG*
Ga0132258_107320774	3300015371	Arabidopsis Rhizosphere	DPADYDALVAAYHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAETDTDHALDRYIDSLGAPSPMELASFPQSANTTPSAPKSARDWPPTDEKTGRPLYFVG*
Ga0132258_136284442	3300015371	Arabidopsis Rhizosphere	DFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTEFRRARRQADTDTDQALDRYIDSLSSPSPMELASFPQSANTPQTAPDSTRDWPPTDAKTGKPLYFVG*
Ga0132256_1018251841	3300015372	Arabidopsis Rhizosphere	YHRDFRPESPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGSPSPMELASFPQSANTPQTAPDSTRDWPPTDAKTGKPLYFVG*
Ga0132256_1029014841	3300015372	Arabidopsis Rhizosphere	HRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHALESYIDSLGAPTRPELASFPQSANSNQPAPKSTPSSSSDWPPTDEKTGRPLYFVG*
Ga0132257_1032225471	3300015373	Arabidopsis Rhizosphere	KRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDQALDRYIDSLGSPSPMELASFPQSANTTQPAPKSTRDWPPTDEKIGRPLYFVG*
Ga0132255_1004694771	3300015374	Arabidopsis Rhizosphere	PQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAENATDQALDRFIDSLGAPSRPELASFPESANTTQPAPKSTRDWPPIDEKTGRPLYFGG*
Ga0132255_1026085181	3300015374	Arabidopsis Rhizosphere	DWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDNALERYIDGLGAPSRAELASFPQSANSGQPGAQPTPKSTRDWPPTDEKTGRPLYFVG*
Ga0132255_1033409932	3300015374	Arabidopsis Rhizosphere	LLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQAVTDTDQAFDPYIDSLSSPSPMELASFPQSANTPQTAPDSTRDWPPTDEKTGKPLYFVG*
Ga0163161_117547921	3300017792	Switchgrass Rhizosphere	LRADWQKRRLQRVEADLHRTLLAETPDASLAAALLSDSPAAKLLARIQRQIAAFERTWYRANTELRRARRQAEADTDHALDRYIDSLGAPSRAELAPFPESTDSQSAPNSTPIPTSDWPPTDEKTGSPLYFVG
Ga0184625_104419912	3300018081	Groundwater Sediment	ADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGAPSRPELAPFPETANTTQPAPKSTRDWPPTDEKTGRPLYFVG
Ga0184628_100416852	3300018083	Groundwater Sediment	VPTGRADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDNALDRYIDSLGAPTRPELASFPQSANTTQPAPKSAPKSSRDWPPTDEKTGRPLYFVG
Ga0184628_101688141	3300018083	Groundwater Sediment	RVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAEADTDNALDRYIDSLSSPSPMKLASFPQSANTTQSAPKSAPNPTKDWPPTDEKTGRPLYFVG
Ga0210380_100529581	3300021082	Groundwater Sediment	KRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAEADTDNALDRYIDSLGAPTRPELASFRPSANIDQPTPNPTPKSTKDWPPTDEKTGRPLYFVG
Ga0213851_16039891	3300021860	Watersheds	EFQPQSPSESFHLETMLRADWQKRRLQRVEADLYRTVLAETPGASLAAALLSDSPAAKLLARTQRQIAAFERTWHRANTELRRARRHDGSADDKAFDKYLDILCTPPPIEELASIRYPACNDAPDAPVALAPIPEWPPIDEKTGRPAYFVG
Ga0213853_112852701	3300021861	Watersheds	DWQKRRLQRVEADLYRTVLADTPGASLAAALLSDSPAAKLLARTQRQIAAFERTWHRANTELRRARRHDGSADEKAFDKYLDILCTPPPIEELASIRYPARNDAPDAPVALTPTPEWPPIDEKTGRPAYFVG
Ga0222622_110829971	3300022756	Groundwater Sediment	AAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARAQAEAAAEESFEKYLDYLTAPPAPGALASLRQSANTTQSVPKPIRDWPPTDEKTGKPLYFVG
Ga0208355_10759192	3300025581	Arctic Peat Soil	DVDTMLRADWQKRRLQRVEADLFRTLLAESPGASLAAALLSESPAARLLARVQRQIAAFERTWYRANAEIRRARKQAEDAAGQSFENYLDRLCAMPSLPPPSELASFPHPANVDPPASPAALNTARDWPPTDEKTGRPLYFVG
Ga0207671_112635862	3300025914	Corn Rhizosphere	PGASLAAALLSESPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDNALDRYIDSLGSPSPMELASFPQSANTAQPAPKSTRDWPPTDEKTGRPLYFVG
Ga0207652_117908721	3300025921	Corn Rhizosphere	GASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRTRQQAEAATDHALDRYIDSLSSPSTMELASFPDSANTTQPTPKSTRDWPPTDEKTGKPLYFVG
Ga0207659_101370373	3300025926	Miscanthus Rhizosphere	RTLVAETPGASLAAALLSDSPAAKLLARVQRQIAALERTWYRANTELRRARRQAETDTDQALDRYIDSLGAPSRPELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG
Ga0207701_102606101	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	PAEYEALAAHYLDEYHPQSPSESFHVDAMLRADWQKRRLQSVEGDLYRSIIAESSNATLIAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRAREQAEPAFDRTVEHYLDFLSARPAPGELASFRQSAGNGRPDSPAAPSATPDWPPTDPKTGRPAFFVG
Ga0207686_106931871	3300025934	Miscanthus Rhizosphere	HRTRLAETPGASLVAALLSDSPAAKLLARIQRQIAAFERTWYRANTELRRTRQQAEADTDQALDRYIDSLSSPSPMELASFPPDAKTAPPASNSTRDWPPTDEKTGRPLYFVG
Ga0207709_107779731	3300025935	Miscanthus Rhizosphere	YHRDFRPQSPSETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPDASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDHALDRYIDSLGAPSRAELASFPDSANSGPTGARS
Ga0207670_100384243	3300025936	Switchgrass Rhizosphere	AETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAETDTDHALNRYIDSLGAPTRAELTSFPQSENTTQPAPKSTRDWPPTDEKTGRPLYFVG
Ga0207670_104098302	3300025936	Switchgrass Rhizosphere	MLRADWQKRLLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLTRVQRQIAAFERTWYRANTELRRARRQSEADTDQALDRYIDSLSSPSPMELASFPPDAKTAPPASNSTRDWPPTDEKTGRPLYFVG
Ga0207669_115803931	3300025937	Miscanthus Rhizosphere	YDALAAAYHSDFRPESPSEAFHVDTMLRADWQKRRLQRVEADLHRTLLAETPEGSLAAAFLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQADADTDHALDRYIDSLGAPTRPELASFPQSANTTQTAPKSTRDWPPTDEKTGRPLYFVG
Ga0207711_117427501	3300025941	Switchgrass Rhizosphere	ETFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAAFLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARQQSEAATDQAMDRYLDSLHSPSPAELASLHQTVNHYVPSPEPAPKSTRDWPPTDEKTGKPLYFVG
Ga0207689_108315651	3300025942	Miscanthus Rhizosphere	RTLLAEIPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANAELRRARRQAEADTDHALESYIDSLGAPTRPELASFPQSANTPQPAPNSTRDWPPTDEKTGRPLFFVG
Ga0207658_119691892	3300025986	Switchgrass Rhizosphere	ASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLSSPSPMELASFPQSANTTPPAPKSARDWPPTDKKTGRPLYFVG
Ga0207641_100291453	3300026088	Switchgrass Rhizosphere	FRPQSPSETFHVDTMIRADWQKRRLQRVEADLHRTLVAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRHAEADTDQALDRHIDSLGAPSPMELASFPQSANSDLPASQPTPNSTRDWPPTDEKTGRPLYFVG
Ga0207641_101781182	3300026088	Switchgrass Rhizosphere	ADWQKRRLQRVEADLHRTLLAETPDASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDQALDRYIDSLGAPSRAELASFPQFANTPKPAPNSSSDWPPTDEKTGRPLYFVG
Ga0207641_105044773	3300026088	Switchgrass Rhizosphere	ADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAALERTWYRANTELRRARRQAETDTDQALDRYIDSLGAPSRPELASFPQSANTTQPAPKSTRDWPPTDEKTGRPLYFVG
Ga0207641_116669111	3300026088	Switchgrass Rhizosphere	RPESPSEAFHVDTMLRADWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARCQAEAGTDHALDRYIDSLGAPTRPELASFPQSANTAPPTPKSTTNPKSDWPPTDEKTGRPLYFVG
Ga0207676_102929382	3300026095	Switchgrass Rhizosphere	DWQKRRLQRVEADLHRTLLAETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEDGTDQALDRYIDSLSSPSLVELASFPQSTNTTQSAPKSAPNPTKDWPPTDEKTGRPLFFVG
Ga0207676_108133401	3300026095	Switchgrass Rhizosphere	WQKRRLQRVEADLHRTLLAETPGASLAAAFLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRRAEAGTDQALDRYIDSLGAPSRPELASFPQSPNTAPSTTKSTRDWPPTDEKTGRPLYFVG
Ga0364929_0248823_205_597	3300034149	Sediment	WQKRRLQRVEADLHRTLLTETPGASLAAALLSDSPAAKLLARVQRQIAAFERTWYRANTELRRARRQAEADTDNALDRYIDSLGAPTRPELASFRQSANTAPPAPKSAPNPTKDWPPTDEKTGRPLYFVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085828

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences