Metagenome Family F085775

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085775
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	135 residues
Representative Sequence	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Number of Associated Samples	96
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	53.15 %
% of genes near scaffold ends (potentially truncated)	45.05 %
% of genes from short scaffolds (< 2000 bps)	85.59 %
Associated GOLD sequencing projects	85
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (59.459 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (17.117 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (76.577 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 59.12% β-sheet: 9.49% Coil/Unstructured: 31.39%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF08241	Methyltransf_11	3.60
PF00589	Phage_integrase	1.80
PF03551	PadR	1.80
PF00565	SNase	1.80
PF00753	Lactamase_B	1.80
PF00313	CSD	0.90
PF00254	FKBP_C	0.90
PF04229	GrpB	0.90
PF02566	OsmC	0.90
PF13333	rve_2	0.90
PF07676	PD40	0.90
PF13237	Fer4_10	0.90
PF00903	Glyoxalase	0.90
PF12681	Glyoxalase_2	0.90
PF01042	Ribonuc_L-PSP	0.90
PF07519	Tannase	0.90
PF01872	RibD_C	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	1.80
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	1.80
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	1.80
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.90
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	0.90
COG1764	Organic hydroperoxide reductase OsmC/OhrA	Defense mechanisms [V]	0.90
COG1765	Uncharacterized OsmC-related protein	General function prediction only [R]	0.90
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	0.90
COG2320	GrpB domain, predicted nucleotidyltransferase, UPF0157 family	General function prediction only [R]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
All Organisms	root	All Organisms	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
cellular organisms	root	All Organisms → cellular organisms	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	40.54 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	11.71 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	5.41 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.70 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	3.60 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3.60 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2.70 %
Vicinamibacteria	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2.70 %
Sphingomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales	1.80 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1.80 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.90 %
Vicinamibacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Sphingomonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae	1.80 %
Vicinamibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae	0.90 %
Hyphomicrobiales incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis	0.90 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.90 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.90 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	0.90 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Sphingomonas	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas	1.80 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.90 %
Luteitalea	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea	0.90 %
Vineibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter	0.90 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.90 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.90 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
unclassified Sphingomonas	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas	1.80 %
Leifsonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia	0.90 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.90 %
Vineibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	0.90 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.90 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	59.46 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.70 %
Sphingomonas sp. HDW15A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. HDW15A	1.80 %
Frankia canadensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia canadensis	0.90 %
Leifsonia aquatica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → Leifsonia aquatica	0.90 %
Luteitalea pratensis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	0.90 %
Vineibacter terrae	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	0.90 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	0.90 %
Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c0642166	Not Available	1036	Open in IMG/M
3300000550\|F24TB_10648945	All Organisms → cellular organisms → Bacteria	2403	Open in IMG/M
3300000559\|F14TC_101129301	Not Available	836	Open in IMG/M
3300002076\|JGI24749J21850_1069149	Not Available	544	Open in IMG/M
3300003999\|Ga0055469_10006472	All Organisms → cellular organisms → Bacteria	2174	Open in IMG/M
3300004156\|Ga0062589_101938964	Not Available	595	Open in IMG/M
3300004463\|Ga0063356_101188318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1107	Open in IMG/M
3300004463\|Ga0063356_104923068	Not Available	574	Open in IMG/M
3300005093\|Ga0062594_100733036	Not Available	899	Open in IMG/M
3300005294\|Ga0065705_10110797	All Organisms → cellular organisms → Bacteria	4344	Open in IMG/M
3300005328\|Ga0070676_10104180	Not Available	1758	Open in IMG/M
3300005330\|Ga0070690_100392806	Not Available	1017	Open in IMG/M
3300005333\|Ga0070677_10592663	All Organisms → cellular organisms → Bacteria	613	Open in IMG/M
3300005334\|Ga0068869_100275037	Not Available	1352	Open in IMG/M
3300005340\|Ga0070689_100008385	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	7277	Open in IMG/M
3300005345\|Ga0070692_10695441	Not Available	683	Open in IMG/M
3300005356\|Ga0070674_100578710	Not Available	946	Open in IMG/M
3300005438\|Ga0070701_10438761	Not Available	835	Open in IMG/M
3300005445\|Ga0070708_101900666	Not Available	552	Open in IMG/M
3300005456\|Ga0070678_101758294	Not Available	584	Open in IMG/M
3300005457\|Ga0070662_100300181	All Organisms → cellular organisms → Bacteria	1305	Open in IMG/M
3300005459\|Ga0068867_100600250	Not Available	960	Open in IMG/M
3300005530\|Ga0070679_100563340	All Organisms → cellular organisms → Bacteria → Acidobacteria	1083	Open in IMG/M
3300005530\|Ga0070679_102053492	Not Available	521	Open in IMG/M
3300005539\|Ga0068853_101554639	Not Available	641	Open in IMG/M
3300005543\|Ga0070672_101712798	Not Available	565	Open in IMG/M
3300005544\|Ga0070686_101062837	Not Available	667	Open in IMG/M
3300005549\|Ga0070704_100400934	All Organisms → cellular organisms → Bacteria	1170	Open in IMG/M
3300005578\|Ga0068854_101188383	Not Available	683	Open in IMG/M
3300005617\|Ga0068859_100622820	Not Available	1172	Open in IMG/M
3300005718\|Ga0068866_11337679	Not Available	522	Open in IMG/M
3300005719\|Ga0068861_100841082	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. HDW15A	864	Open in IMG/M
3300005840\|Ga0068870_10558518	Not Available	772	Open in IMG/M
3300005840\|Ga0068870_11170469	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Leifsonia → Leifsonia aquatica	556	Open in IMG/M
3300005843\|Ga0068860_101411282	Not Available	718	Open in IMG/M
3300006358\|Ga0068871_100208008	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium RIFCSPLOWO2_02_FULL_64_15	1691	Open in IMG/M
3300006844\|Ga0075428_100019874	All Organisms → cellular organisms → Bacteria → Proteobacteria	7435	Open in IMG/M
3300006844\|Ga0075428_101565600	Not Available	689	Open in IMG/M
3300006845\|Ga0075421_100170351	All Organisms → cellular organisms → Bacteria	2713	Open in IMG/M
3300006845\|Ga0075421_100221170	All Organisms → cellular organisms → Bacteria	2333	Open in IMG/M
3300006846\|Ga0075430_100275768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M
3300006852\|Ga0075433_10579343	All Organisms → cellular organisms → Bacteria	986	Open in IMG/M
3300006853\|Ga0075420_100120617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiales incertae sedis → Vineibacter → Vineibacter terrae	2309	Open in IMG/M
3300006871\|Ga0075434_101531663	Not Available	676	Open in IMG/M
3300006880\|Ga0075429_100199139	All Organisms → cellular organisms → Bacteria	1754	Open in IMG/M
3300006881\|Ga0068865_100379296	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia → Frankia canadensis	1153	Open in IMG/M
3300006904\|Ga0075424_102212039	Not Available	579	Open in IMG/M
3300006969\|Ga0075419_10882720	Not Available	644	Open in IMG/M
3300009093\|Ga0105240_11364615	All Organisms → cellular organisms → Bacteria	746	Open in IMG/M
3300009094\|Ga0111539_10826344	Not Available	1078	Open in IMG/M
3300009094\|Ga0111539_10916187	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1019	Open in IMG/M
3300009148\|Ga0105243_10947519	Not Available	860	Open in IMG/M
3300009156\|Ga0111538_11015445	Not Available	1049	Open in IMG/M
3300009156\|Ga0111538_12372104	Not Available	666	Open in IMG/M
3300009156\|Ga0111538_12860668	All Organisms → cellular organisms → Bacteria	604	Open in IMG/M
3300010359\|Ga0126376_12113457	Not Available	607	Open in IMG/M
3300010362\|Ga0126377_10485866	All Organisms → cellular organisms → Bacteria → Acidobacteria	1264	Open in IMG/M
3300010375\|Ga0105239_13199203	Not Available	533	Open in IMG/M
3300010401\|Ga0134121_10652397	All Organisms → cellular organisms → Bacteria → Acidobacteria	992	Open in IMG/M
3300010403\|Ga0134123_12033270	Not Available	633	Open in IMG/M
3300011414\|Ga0137442_1019522	All Organisms → cellular organisms → Bacteria	1168	Open in IMG/M
3300012509\|Ga0157334_1077491	Not Available	512	Open in IMG/M
3300012907\|Ga0157283_10346804	Not Available	533	Open in IMG/M
3300012912\|Ga0157306_10301544	Not Available	588	Open in IMG/M
3300014326\|Ga0157380_10126934	All Organisms → cellular organisms → Bacteria	2169	Open in IMG/M
3300014969\|Ga0157376_10144109	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2141	Open in IMG/M
3300014969\|Ga0157376_12697075	Not Available	537	Open in IMG/M
3300015371\|Ga0132258_11472483	All Organisms → cellular organisms → Bacteria → Acidobacteria → Vicinamibacteria → Vicinamibacterales → Vicinamibacteraceae → Luteitalea → Luteitalea pratensis	1720	Open in IMG/M
3300015371\|Ga0132258_13838421	All Organisms → cellular organisms → Bacteria → Acidobacteria	1023	Open in IMG/M
3300015372\|Ga0132256_100154756	All Organisms → cellular organisms → Bacteria	2304	Open in IMG/M
3300015372\|Ga0132256_103837944	Not Available	505	Open in IMG/M
3300015373\|Ga0132257_100377499	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300015373\|Ga0132257_102498454	Not Available	671	Open in IMG/M
3300015373\|Ga0132257_102560573	Not Available	663	Open in IMG/M
3300015374\|Ga0132255_103873335	Not Available	636	Open in IMG/M
3300017792\|Ga0163161_11009495	Not Available	711	Open in IMG/M
3300018053\|Ga0184626_10325524	Not Available	633	Open in IMG/M
3300018078\|Ga0184612_10543086	Not Available	560	Open in IMG/M
3300018466\|Ga0190268_10227872	Not Available	1047	Open in IMG/M
3300019377\|Ga0190264_11044690	Not Available	659	Open in IMG/M
3300025885\|Ga0207653_10384928	Not Available	549	Open in IMG/M
3300025893\|Ga0207682_10006783	All Organisms → cellular organisms → Bacteria → Acidobacteria	4596	Open in IMG/M
3300025907\|Ga0207645_10331700	Not Available	1016	Open in IMG/M
3300025908\|Ga0207643_10469806	Not Available	802	Open in IMG/M
3300025910\|Ga0207684_11380637	Not Available	577	Open in IMG/M
3300025918\|Ga0207662_10035466	All Organisms → cellular organisms → Bacteria	2913	Open in IMG/M
3300025923\|Ga0207681_10182703	All Organisms → cellular organisms → Bacteria	1599	Open in IMG/M
3300025933\|Ga0207706_11057380	Not Available	680	Open in IMG/M
3300025935\|Ga0207709_10494800	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Sphingomonadales → Sphingomonadaceae → Sphingomonas → unclassified Sphingomonas → Sphingomonas sp. HDW15A	953	Open in IMG/M
3300025940\|Ga0207691_10122218	All Organisms → cellular organisms → Bacteria	2306	Open in IMG/M
3300025941\|Ga0207711_10709495	Not Available	938	Open in IMG/M
3300025942\|Ga0207689_11239080	Not Available	628	Open in IMG/M
3300025961\|Ga0207712_11229979	Not Available	668	Open in IMG/M
3300026041\|Ga0207639_12141154	Not Available	520	Open in IMG/M
3300026075\|Ga0207708_10138478	All Organisms → cellular organisms → Bacteria	1907	Open in IMG/M
3300026089\|Ga0207648_10382797	All Organisms → cellular organisms → Bacteria	1272	Open in IMG/M
3300027909\|Ga0209382_10035762	All Organisms → cellular organisms → Bacteria	5970	Open in IMG/M
3300027909\|Ga0209382_10096419	All Organisms → cellular organisms → Bacteria → Acidobacteria	3469	Open in IMG/M
3300027909\|Ga0209382_10576666	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300028380\|Ga0268265_11333073	Not Available	718	Open in IMG/M
3300028803\|Ga0307281_10224955	Not Available	683	Open in IMG/M
3300031538\|Ga0310888_10356785	All Organisms → cellular organisms → Bacteria → Proteobacteria	849	Open in IMG/M
3300031547\|Ga0310887_10642690	Not Available	654	Open in IMG/M
3300031740\|Ga0307468_100092237	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1770	Open in IMG/M
3300031847\|Ga0310907_10041742	Not Available	1727	Open in IMG/M
3300031858\|Ga0310892_10209463	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300032012\|Ga0310902_11081474	Not Available	560	Open in IMG/M
3300032075\|Ga0310890_10647223	Not Available	823	Open in IMG/M
3300032174\|Ga0307470_11756434	Not Available	524	Open in IMG/M
3300032180\|Ga0307471_103511654	Not Available	555	Open in IMG/M
3300034819\|Ga0373958_0141451	Not Available	596	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	62.16%
Environmental	Environmental	37.84%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	62.16%
Terrestrial	Environmental → Terrestrial	34.23%
Aquatic	Environmental → Aquatic	3.60%

Habitat	Taxonomy	Distribution
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.94%
Soil	Environmental → Terrestrial → Soil	34.23%
Rhizoplane	Host-Associated → Plants → Rhizoplane	24.32%
Sediment	Environmental → Aquatic → Sediment	2.70%
Marine	Environmental → Aquatic → Marine	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.23%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	20.72%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	18.02%
Loam	Environmental → Terrestrial → Soil → Loam	13.51%
Soil	Host-Associated → Plants → Rhizosphere → Soil	11.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.23%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	18.02%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	11.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	11.71%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.91%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	5.41%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.70%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.80%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.80%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	0.90%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	17.12%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.11%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.31%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	5.41%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	3.60%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.60%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.80%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.80%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.80%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.80%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	0.90%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.90%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300002076	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3	Host-Associated	Open in IMG/M
3300003999	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005539	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2	Host-Associated	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006880	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011414	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT266_2	Environmental	Open in IMG/M
3300012509	Unplanted soil (control) microbial communities from North Carolina - M.Soil.8.old.080610_6	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300034819	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_06421662	3300000033	Soil	MVAHMPTRISLLWTVVLLTXPXPLFLVYCXAVVPPXAVLVLSANLIEQEGPLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTAGRQCGDLDW*
F24TB_106489453	3300000550	Soil	MAAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
F14TC_1011293012	3300000559	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
JGI24749J21850_10691491	3300002076	Corn, Switchgrass And Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAG
Ga0055469_100064724	3300003999	Natural And Restored Wetlands	MPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALAVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0062589_1019389641	3300004156	Soil	PCCRSPIRRFHAAAGAIMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILIAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0063356_1011883182	3300004463	Arabidopsis Thaliana Rhizosphere	MVARMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLVAAALMIGEVAIILVAGQLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW*
Ga0063356_1049230681	3300004463	Arabidopsis Thaliana Rhizosphere	IMVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLGAAALMIGEVAIILFAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0062594_1007330363	3300005093	Soil	LAHMPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0065705_101107975	3300005294	Switchgrass Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSINLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070676_101041802	3300005328	Miscanthus Rhizosphere	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLGAAALMIGEVAIILFAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070690_1003928062	3300005330	Switchgrass Rhizosphere	VTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070677_105926632	3300005333	Miscanthus Rhizosphere	VTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTR
Ga0068869_1002750373	3300005334	Miscanthus Rhizosphere	GATGVTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVGVLVLSANLIEEEALLGLAAAVLMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070689_1000083852	3300005340	Switchgrass Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070692_106954412	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	SLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070674_1005787102	3300005356	Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVIWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070701_104387611	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070708_1019006661	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	SLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0070678_1017582941	3300005456	Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQC
Ga0070662_1003001813	3300005457	Corn Rhizosphere	VTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0068867_1006002501	3300005459	Miscanthus Rhizosphere	DDDLGGATGVTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVVIILFAGSLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070679_1005633401	3300005530	Corn Rhizosphere	AHMPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070679_1020534921	3300005530	Corn Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGKVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFFDCMDGHGLTRCSLPMIVRAGL
Ga0068853_1015546392	3300005539	Corn Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTT
Ga0070672_1017127981	3300005543	Miscanthus Rhizosphere	AHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVVIILFAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070686_1010628371	3300005544	Switchgrass Rhizosphere	VAHMPTRLSLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0070704_1004009342	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	VTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0068854_1011883832	3300005578	Corn Rhizosphere	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLGAAALMIGEVAIILFAGRLVVWFLARRLPPQARAIAIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTTGRQCGDLGW*
Ga0068859_1006228203	3300005617	Switchgrass Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCS
Ga0068866_113376792	3300005718	Miscanthus Rhizosphere	SLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLIVWFLARRLPPQARAIGMAALVVLSLLPIYFFDCMDGLGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0068861_1008410822	3300005719	Switchgrass Rhizosphere	MVAHMPTRLSLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0068870_105585181	3300005840	Miscanthus Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGD
Ga0068870_111704691	3300005840	Miscanthus Rhizosphere	SLLWTVVLLTLPCPLFLVYCFAVVPPVGVLVLSANLIEEEALLGLAAAVLMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0068860_1014112822	3300005843	Switchgrass Rhizosphere	LAHMPTCISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0068871_1002080083	3300006358	Miscanthus Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0075428_1000198747	3300006844	Populus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLAAAALMIGEVAIILVAGQLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGPRLTRCSLPMIVRAGFTAGRQCGNLDW*
Ga0075428_1015656002	3300006844	Populus Rhizosphere	VAHMPTRIALLWTVVLLTLPCPLFLVYCFAVAPPVAVLVVSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLQPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQ
Ga0075421_1001703514	3300006845	Populus Rhizosphere	MVAHMPTSIALLWTVVLLTLPCPLFLVYCFAVVPPLAVLVLSANLIEQESLLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAERQCGDLGW*
Ga0075421_1002211702	3300006845	Populus Rhizosphere	MPTRIALLWTVVLLTLPCPLFLVYCFAVAPPVAVLVVSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLQPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGGLGW*
Ga0075430_1002757685	3300006846	Populus Rhizosphere	VAHMPTRIALLWTVVLLTLPCPLFLVYCFAVAPPVAVLVVSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLQPIYFLDCMDGHGLTRCSLPMIVRAGL
Ga0075433_105793431	3300006852	Populus Rhizosphere	MVAHMPTRLSLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFVARRLPPQARGIGIAALIVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGL
Ga0075420_1001206172	3300006853	Populus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLAAAALMIGEVAIILVAGQLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW*
Ga0075434_1015316631	3300006871	Populus Rhizosphere	VVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEPLLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0075429_1001991394	3300006880	Populus Rhizosphere	VAHMPTRIALLWTVVLLTLPCPLFLVYCFAVAPPVAVLVVSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLQPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGGLGW*
Ga0068865_1003792962	3300006881	Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVIWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLGW*
Ga0075424_1022120391	3300006904	Populus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEPVLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0075419_108827202	3300006969	Populus Rhizosphere	MVAHMPTSIALLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0105240_113646152	3300009093	Corn Rhizosphere	MLAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0111539_108263441	3300009094	Populus Rhizosphere	LWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0111539_109161872	3300009094	Populus Rhizosphere	WTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPAQARAIGIAALVVLSLLPIYFLDCMDGHGLMRCSLPMIVRAGLTAGQQCGDLGW*
Ga0105243_109475191	3300009148	Miscanthus Rhizosphere	MVSHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEPLLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGQQCGDLGW*
Ga0111538_110154452	3300009156	Populus Rhizosphere	HMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0111538_123721041	3300009156	Populus Rhizosphere	VIMVSHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVIWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGQQCGDLGW*
Ga0111538_128606682	3300009156	Populus Rhizosphere	VLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVVSLLPIYFLDCMDGLGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0126376_121134571	3300010359	Tropical Forest Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHRLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0126377_104858661	3300010362	Tropical Forest Soil	MPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQELLLGLAAAALMIGEVAIILVAGRLVVWILARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0105239_131992031	3300010375	Corn Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMDR
Ga0134121_106523971	3300010401	Terrestrial Soil	DLPQRGSTLRSHNLAHMPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0134123_120332701	3300010403	Terrestrial Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0137442_10195221	3300011414	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAAPMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0157334_10774912	3300012509	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRA
Ga0157283_103468041	3300012907	Soil	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILIAGRLMVWFLARRLPPHARVIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0157306_103015441	3300012912	Soil	LFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILIAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0157380_101269342	3300014326	Switchgrass Rhizosphere	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0157376_101441092	3300014969	Miscanthus Rhizosphere	MLAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTTGRQCGDLGW*
Ga0157376_126970751	3300014969	Miscanthus Rhizosphere	VVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW*
Ga0132258_114724831	3300015371	Arabidopsis Rhizosphere	VTGCRRADRHAAVRRSGGFTRLQESIMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSINLIEQEALLGLAAAALMIGEVAIILVAGRLMVWCLARRLPPQARAIGIAALGVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTVGRQCGDLGW*
Ga0132258_138384211	3300015371	Arabidopsis Rhizosphere	DTVDRFAATTDLPQRGSTLRSHNLAHMPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0132256_1001547562	3300015372	Arabidopsis Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGRAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0132256_1038379441	3300015372	Arabidopsis Rhizosphere	IMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTTGRQCGDLGW*
Ga0132257_1003774993	3300015373	Arabidopsis Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSRLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW*
Ga0132257_1024984541	3300015373	Arabidopsis Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSINLIEQEALLGLAAAALMIGEVAIILVAGRLMVWCLARRLPPQARAIGIAALGVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGQQCGDLGW*
Ga0132257_1025605732	3300015373	Arabidopsis Rhizosphere	VVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTTGRQCGDLGW*
Ga0132255_1038733351	3300015374	Arabidopsis Rhizosphere	ISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTTGRQCGDLGW*
Ga0163161_110094952	3300017792	Switchgrass Rhizosphere	VYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0184626_103255241	3300018053	Groundwater Sediment	GLRRIYQSVAPWLHAAGVIMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTTGRQCGDLGW
Ga0184612_105430861	3300018078	Groundwater Sediment	LTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTTGRQCGDLGW
Ga0190268_102278721	3300018466	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLAAAVLMIGEVAIILVAGRLVVWFLARRLPPQSRAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW
Ga0190264_110446902	3300019377	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGQQCGDLDW
Ga0207653_103849281	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	MVAHMPTRLSLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207682_100067833	3300025893	Miscanthus Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207645_103317001	3300025907	Miscanthus Rhizosphere	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207643_104698062	3300025908	Miscanthus Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCIAVVPPVAVLVLSANLIGQEPLLGLAAAALMIGEVAFILVAGRLIVWFLARRLPPQARAIGITALVVLSLLPIYFLDCMDGYGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207684_113806371	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVGLSLLPIYFLDCMDGQGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207662_100354661	3300025918	Switchgrass Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207681_101827032	3300025923	Switchgrass Rhizosphere	MVAHMPTRISLLWVVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207706_110573802	3300025933	Corn Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVVIILFAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207709_104948002	3300025935	Miscanthus Rhizosphere	EHPVDDDLGGATGVTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEPLLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0207691_101222183	3300025940	Miscanthus Rhizosphere	MPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207711_107094951	3300025941	Switchgrass Rhizosphere	IMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEAFLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207689_112390801	3300025942	Miscanthus Rhizosphere	RRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207712_112299791	3300025961	Switchgrass Rhizosphere	LGGATGVTLADPAVSRRCSSHNGAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207639_121411541	3300026041	Corn Rhizosphere	MVAHMPTRISLLWTVVLLTLPSPLFLVYCFGVVPPVAVLVLSANLIDQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPKARAIGIAALVVLSLLPIYFFDCMDGQELTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207708_101384784	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0207648_103827973	3300026089	Miscanthus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMSVRAGLTAGQQCGDLGW
Ga0209382_100357625	3300027909	Populus Rhizosphere	MPTRIALLWTVVLLTLPCPLFLVYCFAVAPPVAVLVVSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLQPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGGLGW
Ga0209382_100964194	3300027909	Populus Rhizosphere	MVAHMPTSIALLWTVVLLTLPCPLFLVYCFAVVPPLAVLVLSANLIEQESLLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAERQCGDLGW
Ga0209382_105766662	3300027909	Populus Rhizosphere	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGPLGLAAAALMIGEVAIILVAGQLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGPRLTRCSLPMIVRAGFTAGRQCGNLDW
Ga0268265_113330731	3300028380	Switchgrass Rhizosphere	FLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0307281_102249552	3300028803	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIV
Ga0310888_103567852	3300031538	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW
Ga0310887_106426902	3300031547	Soil	LVYCFAVVPPVAVLVLSANLIEQEALLGLGAAALMIGEVAIILFAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0307468_1000922373	3300031740	Hardwood Forest Soil	MLPFADPRFHAAAEVIMVAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTTGRQCGDLGW
Ga0310907_100417422	3300031847	Soil	MPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGLLGLAAAALMIGEVAIILVAGRLVVWFLARRLPRQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW
Ga0310892_102094632	3300031858	Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEGLLGLAAAALMIGEVAIILVAGRLVVWFLARRLPRQARAIGIAALVVLSLLPIYFLDCMDGQGLTRCSLPMIVRAGFTAGRQCGDLDW
Ga0310902_110814741	3300032012	Soil	VIMLAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0310890_106472231	3300032075	Soil	AAVIMVAHMPTRLSLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLLVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGYGLTRCSFPMIVRAGLTAGRQCGDLGW
Ga0307470_117564341	3300032174	Hardwood Forest Soil	MVAHMPTRISLLWTVVLLTLPCPLFLVYCLAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLVVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0307471_1035116542	3300032180	Hardwood Forest Soil	PCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPQARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTAGRQCGDLGW
Ga0373958_0141451_94_507	3300034819	Rhizosphere Soil	MLAHMPTRISLLWTVVLLTLPCPLFLVYCFAVVPPVAVLVLSANLIEQEALLGLAAAALMIGEVAIILVAGRLMVWFLARRLPPHARAIGIAALVVLSLLPIYFLDCMDGHGLTRCSLPMIVRAGLTTGRQCGDLGW

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085775

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences