Metagenome / Metatranscriptome Family F085756

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085756
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	93 residues
Representative Sequence	MALWNLRWGTAGSAFVLGMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAEGQPRYGGTGAIGFSPAAVTPPSKE
Number of Associated Samples	86
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	81.08 %
% of genes near scaffold ends (potentially truncated)	36.94 %
% of genes from short scaffolds (< 2000 bps)	90.99 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (54.955 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (17.117 % of family members)
Environment Ontology (ENVO)	Unclassified (49.550 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (72.072 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 46.67% β-sheet: 0.00% Coil/Unstructured: 53.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01436	NHL	9.01
PF12681	Glyoxalase_2	9.01
PF07883	Cupin_2	6.31
PF00903	Glyoxalase	6.31
PF00141	peroxidase	6.31
PF07626	PSD3	5.41
PF00027	cNMP_binding	4.50
PF08450	SGL	4.50
PF07676	PD40	3.60
PF07995	GSDH	2.70
PF04227	Indigoidine_A	0.90
PF08240	ADH_N	0.90
PF07637	PSD5	0.90
PF07635	PSCyt1	0.90
PF14534	DUF4440	0.90
PF03781	FGE-sulfatase	0.90
PF03098	An_peroxidase	0.90
PF00069	Pkinase	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0376	Catalase (peroxidase I)	Inorganic ion transport and metabolism [P]	6.31
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	4.50
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	4.50
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.60
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	2.70
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	0.90
COG2313	Pseudouridine-5'-phosphate glycosidase (pseudoU degradation)	Nucleotide transport and metabolism [F]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	55.86 %
Unclassified	root	N/A	44.14 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	55.86 %
Unclassified	root	N/A	44.14 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.95 %
Unclassified	root	N/A	44.14 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	15.32 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.31 %
Opisthokonta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta	0.90 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	10.81 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %
Fungi	kingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi	0.90 %
unclassified Proteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria	0.90 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.90 %
Dikarya	subkingdom	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Ascomycota	phylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota	0.90 %
Bryobacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
saccharomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta	0.90 %
Bryobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Pezizomycotina	subphylum	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
leotiomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
sordariomyceta	clade	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Sordariomycetes	class	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Hypocreomycetidae	subclass	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Hypocreales	order	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Nectriaceae	family	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Nectriaceae	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	44.14 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	10.81 %
Fusarium	genus	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Nectriaceae → Fusarium	0.90 %
Bryobacter aggregatus	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	0.90 %
Proteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	0.90 %
Xanthomonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	0.90 %
bacterium	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_102211801	Not Available	641	Open in IMG/M
3300000956\|JGI10216J12902_115293741	Not Available	591	Open in IMG/M
3300005093\|Ga0062594_101250858	All Organisms → cellular organisms → Bacteria	740	Open in IMG/M
3300005328\|Ga0070676_10060211	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2254	Open in IMG/M
3300005328\|Ga0070676_11443165	Not Available	529	Open in IMG/M
3300005330\|Ga0070690_100865572	Not Available	705	Open in IMG/M
3300005330\|Ga0070690_101559119	Not Available	535	Open in IMG/M
3300005331\|Ga0070670_100006175	All Organisms → cellular organisms → Bacteria	10129	Open in IMG/M
3300005333\|Ga0070677_10063315	All Organisms → cellular organisms → Bacteria	1533	Open in IMG/M
3300005334\|Ga0068869_100390712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1142	Open in IMG/M
3300005334\|Ga0068869_100714453	Not Available	856	Open in IMG/M
3300005340\|Ga0070689_100056768	All Organisms → cellular organisms → Bacteria	3037	Open in IMG/M
3300005353\|Ga0070669_100277892	All Organisms → cellular organisms → Bacteria	1341	Open in IMG/M
3300005353\|Ga0070669_100479546	Not Available	1029	Open in IMG/M
3300005353\|Ga0070669_101279386	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300005364\|Ga0070673_100270647	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300005364\|Ga0070673_101503602	Not Available	635	Open in IMG/M
3300005365\|Ga0070688_100490460	All Organisms → cellular organisms → Bacteria	925	Open in IMG/M
3300005365\|Ga0070688_101363565	Not Available	574	Open in IMG/M
3300005367\|Ga0070667_100463427	Not Available	1159	Open in IMG/M
3300005438\|Ga0070701_11350235	Not Available	511	Open in IMG/M
3300005441\|Ga0070700_100306705	Not Available	1161	Open in IMG/M
3300005467\|Ga0070706_101327053	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300005471\|Ga0070698_101658289	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005543\|Ga0070672_100024153	All Organisms → cellular organisms → Bacteria	4487	Open in IMG/M
3300005544\|Ga0070686_100576490	All Organisms → cellular organisms → Bacteria	883	Open in IMG/M
3300005577\|Ga0068857_101870212	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300005719\|Ga0068861_101059869	Not Available	777	Open in IMG/M
3300005840\|Ga0068870_10119497	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1516	Open in IMG/M
3300005840\|Ga0068870_10571272	Not Available	764	Open in IMG/M
3300005840\|Ga0068870_10932783	All Organisms → cellular organisms → Bacteria	615	Open in IMG/M
3300005841\|Ga0068863_100810297	All Organisms → cellular organisms → Bacteria → Proteobacteria	934	Open in IMG/M
3300005842\|Ga0068858_100460715	All Organisms → cellular organisms → Bacteria	1226	Open in IMG/M
3300005844\|Ga0068862_102027861	Not Available	586	Open in IMG/M
3300006046\|Ga0066652_100250462	All Organisms → cellular organisms → Bacteria	1551	Open in IMG/M
3300006358\|Ga0068871_101875625	Not Available	570	Open in IMG/M
3300006580\|Ga0074049_11700799	Not Available	603	Open in IMG/M
3300006844\|Ga0075428_100535097	All Organisms → cellular organisms → Bacteria → Proteobacteria	1253	Open in IMG/M
3300006894\|Ga0079215_10607520	Not Available	715	Open in IMG/M
3300007004\|Ga0079218_10001788	All Organisms → cellular organisms → Bacteria → Proteobacteria	8117	Open in IMG/M
3300009094\|Ga0111539_10336308	All Organisms → cellular organisms → Bacteria	1757	Open in IMG/M
3300009098\|Ga0105245_11773236	Not Available	670	Open in IMG/M
3300009156\|Ga0111538_11987810	Not Available	731	Open in IMG/M
3300009156\|Ga0111538_12422620	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	659	Open in IMG/M
3300009553\|Ga0105249_13548422	Not Available	502	Open in IMG/M
3300010399\|Ga0134127_10546185	All Organisms → cellular organisms → Bacteria	1179	Open in IMG/M
3300010403\|Ga0134123_10647784	All Organisms → cellular organisms → Bacteria	1024	Open in IMG/M
3300011119\|Ga0105246_11481449	All Organisms → cellular organisms → Bacteria	637	Open in IMG/M
3300012159\|Ga0137344_1052683	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300012232\|Ga0137435_1017044	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2058	Open in IMG/M
3300012916\|Ga0157310_10068882	Not Available	1070	Open in IMG/M
3300013308\|Ga0157375_12720538	Not Available	591	Open in IMG/M
3300014326\|Ga0157380_11057025	All Organisms → cellular organisms → Bacteria	849	Open in IMG/M
3300014326\|Ga0157380_11448928	Not Available	738	Open in IMG/M
3300014745\|Ga0157377_10389199	Not Available	946	Open in IMG/M
3300014969\|Ga0157376_12645863	All Organisms → cellular organisms → Eukaryota → Opisthokonta → Fungi → Dikarya → Ascomycota → saccharomyceta → Pezizomycotina → leotiomyceta → sordariomyceta → Sordariomycetes → Hypocreomycetidae → Hypocreales → Nectriaceae → Fusarium	542	Open in IMG/M
3300015200\|Ga0173480_10370349	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	823	Open in IMG/M
3300015201\|Ga0173478_10180393	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	868	Open in IMG/M
3300015201\|Ga0173478_10298576	Not Available	728	Open in IMG/M
3300015371\|Ga0132258_11998638	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300015372\|Ga0132256_100413770	All Organisms → cellular organisms → Bacteria	1451	Open in IMG/M
3300015373\|Ga0132257_101076141	Not Available	1014	Open in IMG/M
3300017965\|Ga0190266_10132566	All Organisms → cellular organisms → Bacteria	1088	Open in IMG/M
3300017965\|Ga0190266_10134716	Not Available	1082	Open in IMG/M
3300018083\|Ga0184628_10000222	All Organisms → cellular organisms → Bacteria	33700	Open in IMG/M
3300018466\|Ga0190268_11342208	Not Available	607	Open in IMG/M
3300018469\|Ga0190270_10186717	Not Available	1734	Open in IMG/M
3300018476\|Ga0190274_10549516	Not Available	1169	Open in IMG/M
3300018476\|Ga0190274_10783824	Not Available	1008	Open in IMG/M
3300018476\|Ga0190274_11588006	All Organisms → cellular organisms → Bacteria	747	Open in IMG/M
3300018476\|Ga0190274_12030916	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300018481\|Ga0190271_10244382	All Organisms → cellular organisms → Bacteria	1823	Open in IMG/M
3300018481\|Ga0190271_10473418	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium	1360	Open in IMG/M
3300019362\|Ga0173479_10052332	All Organisms → cellular organisms → Bacteria → Proteobacteria → unclassified Proteobacteria → Proteobacteria bacterium	1346	Open in IMG/M
3300022908\|Ga0247779_1123516	Not Available	677	Open in IMG/M
3300025893\|Ga0207682_10124537	Not Available	1146	Open in IMG/M
3300025893\|Ga0207682_10258289	Not Available	812	Open in IMG/M
3300025907\|Ga0207645_10104639	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1828	Open in IMG/M
3300025908\|Ga0207643_10065514	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2081	Open in IMG/M
3300025908\|Ga0207643_10108856	All Organisms → cellular organisms → Bacteria	1631	Open in IMG/M
3300025908\|Ga0207643_10142989	Not Available	1430	Open in IMG/M
3300025923\|Ga0207681_10051901	All Organisms → cellular organisms → Bacteria	2779	Open in IMG/M
3300025926\|Ga0207659_10244737	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1452	Open in IMG/M
3300025927\|Ga0207687_10705673	Not Available	856	Open in IMG/M
3300025931\|Ga0207644_10452760	All Organisms → cellular organisms → Bacteria → Acidobacteria	1054	Open in IMG/M
3300025937\|Ga0207669_11757884	Not Available	530	Open in IMG/M
3300025942\|Ga0207689_10225198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Xanthomonadales	1550	Open in IMG/M
3300025986\|Ga0207658_10357651	All Organisms → cellular organisms → Bacteria	1273	Open in IMG/M
3300025986\|Ga0207658_10745533	Not Available	887	Open in IMG/M
3300026035\|Ga0207703_10681230	All Organisms → cellular organisms → Bacteria	977	Open in IMG/M
3300026075\|Ga0207708_10320395	Not Available	1265	Open in IMG/M
3300026075\|Ga0207708_11810737	Not Available	536	Open in IMG/M
3300026088\|Ga0207641_10641276	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300026118\|Ga0207675_101052236	All Organisms → cellular organisms → Bacteria	833	Open in IMG/M
3300026121\|Ga0207683_10948827	Not Available	799	Open in IMG/M
3300027886\|Ga0209486_10000516	All Organisms → cellular organisms → Bacteria	17291	Open in IMG/M
3300027907\|Ga0207428_11048370	Not Available	571	Open in IMG/M
3300028379\|Ga0268266_11050005	Not Available	788	Open in IMG/M
3300028381\|Ga0268264_10255460	All Organisms → cellular organisms → Bacteria	1630	Open in IMG/M
3300031847\|Ga0310907_10593077	Not Available	603	Open in IMG/M
3300031908\|Ga0310900_11462469	Not Available	575	Open in IMG/M
3300031943\|Ga0310885_10120500	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1219	Open in IMG/M
3300032000\|Ga0310903_10300639	Not Available	789	Open in IMG/M
3300032012\|Ga0310902_10471221	Not Available	814	Open in IMG/M
3300032013\|Ga0310906_10710484	All Organisms → cellular organisms → Bacteria	703	Open in IMG/M
3300032122\|Ga0310895_10430362	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	652	Open in IMG/M
3300032144\|Ga0315910_10343530	All Organisms → cellular organisms → Bacteria → Proteobacteria	1137	Open in IMG/M
3300032144\|Ga0315910_10962003	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	666	Open in IMG/M
3300032157\|Ga0315912_11199505	All Organisms → cellular organisms → Bacteria → Acidobacteria	601	Open in IMG/M
3300032157\|Ga0315912_11464865	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Bryobacteraceae → Bryobacter → Bryobacter aggregatus	538	Open in IMG/M
3300032205\|Ga0307472_102627445	Not Available	513	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	52.25%
Environmental	Environmental	47.75%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	52.25%
Terrestrial	Environmental → Terrestrial	45.05%
Aquatic	Environmental → Aquatic	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	44.14%
Rhizosphere	Host-Associated → Plants → Rhizosphere	32.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	18.92%
Sediment	Environmental → Aquatic → Sediment	2.70%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	33.33%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.82%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	12.61%
Loam	Environmental → Terrestrial → Soil → Loam	10.81%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.90%
Soil	Host-Associated → Plants → Rhizoplane → Soil	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.82%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.22%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	12.61%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	10.81%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.31%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.60%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.70%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.70%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.90%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	17.12%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	10.81%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	8.11%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	8.11%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	7.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.31%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.41%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	5.41%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.70%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.70%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	1.80%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.80%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005333	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG	Host-Associated	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005438	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaG	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005840	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006894	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012232	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT100_2	Environmental	Open in IMG/M
3300012916	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S213-509R-2	Environmental	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015200	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S209-509C-1 (version 2)	Environmental	Open in IMG/M
3300015201	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S014-104B-1 (version 2)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017965	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 220 T	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018466	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 T	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300022908	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L221-509R-5	Environmental	Open in IMG/M
3300025893	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025942	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027886	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes)	Environmental	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031847	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D4	Environmental	Open in IMG/M
3300031908	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D1	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032144	Garden soil microbial communities collected in Santa Monica, California, United States - Edamame soil	Environmental	Open in IMG/M
3300032157	Garden soil microbial communities collected in Santa Monica, California, United States - V. faba soil	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1022118011	3300000956	Soil	MAVQHLRRSSVVPTASAFVIGVVTGLFLKEAAHRGQQFARRKWANRESKRTVTYDENLPDSLERREPAPQAGQPRFGGTGAIGFSPAAATDPVGRKQT*
JGI10216J12902_1152937412	3300000956	Soil	MTGLNLNWKTGAAFGLGMVAGLVLKEAVQRTQDVARRQRTRRANERTVAYDDNLPEPLERREPAPEAGQPRY
Ga0062594_1012508581	3300005093	Soil	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070676_100602113	3300005328	Miscanthus Rhizosphere	MAGQNLKWRSGAFAASVFGLGVVTGLFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR*
Ga0070676_114431651	3300005328	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRP
Ga0070690_1008655721	3300005330	Switchgrass Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE*
Ga0070690_1015591191	3300005330	Switchgrass Rhizosphere	IGRESLMALWNLRWGTGTSSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTPPSKE*
Ga0070670_1000061757	3300005331	Switchgrass Rhizosphere	MAGWNLRWGTGAGSAFVLGMLAGLVLKEAVQRAQDLAQRKYAHRERENTVAFDDNLPDALERREPAPAPGQPRYGGTGAIGFSPAAVKTPSE*
Ga0070677_100633151	3300005333	Miscanthus Rhizosphere	MAGQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRD
Ga0068869_1003907122	3300005334	Miscanthus Rhizosphere	MAGQNLRWGSGAGSAFVVGLVAGLFLKEAVRRGQQLVRRKYAHREREHTVAFDENLPDALERREPVPEPGQPRYGGTGAIGFSPAAVTPPSE*
Ga0068869_1007144532	3300005334	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTPPSKE*
Ga0070689_1000567681	3300005340	Switchgrass Rhizosphere	ALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070669_1002778921	3300005353	Switchgrass Rhizosphere	MPNLRWGALGATPAFMLGVVTGLFLKEAVQRGQELARRKYAHREREHTVAFDDNLPDALERREPAPEPGQSRYGGTGAIGFSPAAVTQPTE*
Ga0070669_1004795462	3300005353	Switchgrass Rhizosphere	MAGQNLRWTRGALAASAFGLGVATGLFLKEAVQRTQELARRKQAHREYERTVSYDENLPDTLERREPAPTEGQPRYGGTGAIGFSPAAGPVRPGDTRSS*
Ga0070669_1012793861	3300005353	Switchgrass Rhizosphere	GMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPEALERREPAPGEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070673_1002706472	3300005364	Switchgrass Rhizosphere	MALWNLRWGTAGSAFVLGMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPEALERREPAPEQGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070673_1015036022	3300005364	Switchgrass Rhizosphere	MAGQNLRWTRGALAASAFGLGVATGLFLKEAVQRTQELARRKQAHREYERTVSYDENLPDTLERREPAPTEGQPRYGGTGAIGFSPAAGPVRPGDT
Ga0070688_1004904601	3300005365	Switchgrass Rhizosphere	MALWNLRWGTVSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070688_1013635652	3300005365	Switchgrass Rhizosphere	MAGWNLRWGTRTGSAFVLGMVAGLVLKEAVQLAQEAARRKYAHREREHTVAFDENLPDALERREPAPEQGQPRFGGTGAIGFSPAAVTTPSK*
Ga0070667_1004634272	3300005367	Switchgrass Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAA
Ga0070701_113502351	3300005438	Corn, Switchgrass And Miscanthus Rhizosphere	MALWNLRWGTAGSAFVLGMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPEALERREPAPGEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070700_1003067051	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTG
Ga0070706_1013270531	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	PAFMLGVVAGLFLKEAVQRGQELARRKHAHREREHTVVFDANLPDALERREPVPEPGQPRYGGTGAIGFSPAAVTQPTE*
Ga0070698_1016582892	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	GSAFVVGLVAGLFLKEAVRRGQQLVRRKYAHREREHTVAFDENLPDALERREPVPEPGQPRYGGTGAIGVSPAAVTPPSE*
Ga0070672_1000241535	3300005543	Miscanthus Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPVEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0070686_1005764902	3300005544	Switchgrass Rhizosphere	MAGHNLRRGSAQGLSWFVVGVVAGLFLKEALQKVQERVRRKNAHLDYERTVSYDENLPDALERREPAPQPDQPRFGGTGAIGFSPTAAMPEPRNN*
Ga0068857_1018702122	3300005577	Corn Rhizosphere	MARQAASAFVLGVVTGLFLKEAVQHGQQLARRKWAHRENESTVTFGENLPDSLERREPAPQPGQPRFGGTGAIGFSPAAAADTPEPERT*
Ga0068861_1010598691	3300005719	Switchgrass Rhizosphere	MPNLRWEGLGAGPAFMLGVVAGLFLKEAVQRGQELARRKHAHREREHTVAFDDNLPDALERREPAPEPGQSRYGGTGAIGF
Ga0068870_101194972	3300005840	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTPPSK*
Ga0068870_105712722	3300005840	Miscanthus Rhizosphere	WGMRRLMRTEDAMAGQNLKWRSGAFAASVFGLGVVTGVFLKAAVQRTQELARHKHAHRENERTVTYDENRPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR*
Ga0068870_109327831	3300005840	Miscanthus Rhizosphere	KGDLMTGWNLRWGTRTASAFALGMVAGLFLKEAVHRAQERARRQDAHRENERTVTFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0068863_1008102972	3300005841	Switchgrass Rhizosphere	MAGWNLRWGTGAGSAFVLGMLAGLVLKEAVQRAQDLAQRKYAHRERENTVAFDDNLPDALERREPAPAPGQPRYGGTGAIGFSPAAVRTPSE*
Ga0068858_1004607151	3300005842	Switchgrass Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVAPPSK*
Ga0068862_1020278611	3300005844	Switchgrass Rhizosphere	MAGQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQGS*
Ga0066652_1002504622	3300006046	Soil	MAGWNLRWATGAGPAFALGIVAGLFLREAARYGQELARRKYAHREREDTVAFGDNLPDVLERREPAPAAGQPRYGGTGAIGFSPAVVTPSSE*
Ga0068871_1018756251	3300006358	Miscanthus Rhizosphere	MRRESLMAGWNLRWGTGAGSAFVLGMLAGLVLKEAVQRAQDLAQRKYAHRERENTVAFDDNLPDALERREPAPAPGQPRYGGTGAIGFSPAAVKTPSE*
Ga0074049_117007992	3300006580	Soil	MAGQNLKWRTGALAASGFGLGVVAGLFLKGAVERRQELGRRKQAHRENERTVSYDENLPDSLERREPAPQEGQPRYGGTGAIGFSPAAATARPRDPQDS*
Ga0075428_1005350972	3300006844	Populus Rhizosphere	MARQAASAFVLGVVTGLFLKEAVQHGQQLARRTWAHRENESTVTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT*
Ga0079215_106075202	3300006894	Agricultural Soil	MAGLNLMRNGGVRAGSASALGVVTGLFLKETLHRMQEVVQRRQAHREHEGTVVYDENLPDSLERREPAPHEGQVRFGGTGALGVAPAAAATARETTSPVEDPHAPRDRP*
Ga0079218_100017885	3300007004	Agricultural Soil	MAGLNLMRNGGVRAGSAFALGVVTGLFLKETLHRMQEVVQRRQAHREHEGTVVYDENLPDSLERREPAPHEGQVRFGGTGALGVAPAAAATARETTSPVEDPHAPRDRP*
Ga0111539_103363083	3300009094	Populus Rhizosphere	MAEQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQGS*
Ga0105245_117732361	3300009098	Miscanthus Rhizosphere	MALWNLRWGTAGSAFVLGMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAEGQPRYGGTGAIGFSPAAVTPPSKE*
Ga0111538_119878101	3300009156	Populus Rhizosphere	MAGQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRYGGTGAIGFSPAAATARPRDPQGS*
Ga0111538_124226202	3300009156	Populus Rhizosphere	MARQAASAFVLGVVTGLFLKEVVQHGQHFARRTWAHRENENTVTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT*
Ga0105249_135484222	3300009553	Switchgrass Rhizosphere	MRTEDAMAGQNLKWRSGAFAASVFGLGVVTGLFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAV
Ga0134127_105461852	3300010399	Terrestrial Soil	MARQAASAFVLGVVTGLFLKEAVQHGQQLARRKWAHRENESTVTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT*
Ga0134123_106477842	3300010403	Terrestrial Soil	MALWNLRWGTAGSAFVLGMVAGLFLKDAVQRAQEVARRKYAHSEREQTIAFDENLPEALERREPAPGEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0105246_114814492	3300011119	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPVPEPGQPRYGGTGAIGFSPAAVTPPSE*
Ga0137344_10526832	3300012159	Soil	VAFVSGVVAGLFLREGLRRTQELARRKWAQREHERTVTYEDNLPDSLERREPAPQEGQPRYGGTGAIGFSPAVAAEANPSDT*
Ga0137435_10170444	3300012232	Soil	MPQYLSRNGAALTGSAFVAGIVTGLFAREILQRMQELARRKWSHREYERTVTYDENLPDSLERREPAPQPGQPRFGGTGAIGFSPAAATTARARDGER*
Ga0157310_100688822	3300012916	Soil	MAGQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDP
Ga0157375_127205382	3300013308	Miscanthus Rhizosphere	MAGQNLRWRSGALAASAFGLGVAAGLFLKEAVQRMQELARRKQAHREYERTVSYDENLPDTLERREPAPTEGQPRYGGTG
Ga0157380_110570251	3300014326	Switchgrass Rhizosphere	ISTRIGRESLMALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0157380_114489282	3300014326	Switchgrass Rhizosphere	MGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE*
Ga0157377_103891992	3300014745	Miscanthus Rhizosphere	MCLSQVRREDFMAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE*
Ga0157376_126458632	3300014969	Miscanthus Rhizosphere	MAGQNLKWRTGALAASGFGLGVVAGLFLKGAVERRQELGRRKQAHRENERTVSYDENLPDSLERREPAPQEGQPRYGGTGAIGFSPAAATARP
Ga0173480_103703491	3300015200	Soil	MRTEDAMAGQNLKWRSGAFAASVFGLGVVTGVFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALG
Ga0173478_101803932	3300015201	Soil	MRTEDAMAGQNLKWRSGAFAASVFGLGVVTGLFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISP
Ga0173478_102985762	3300015201	Soil	AASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQGS*
Ga0132258_119986383	3300015371	Arabidopsis Rhizosphere	ESLMALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTPPSKE*
Ga0132256_1004137703	3300015372	Arabidopsis Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQDAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK*
Ga0132257_1010761411	3300015373	Arabidopsis Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQDAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGF
Ga0190266_101325662	3300017965	Soil	MAGLNLMRNGGVRAGSAFALGVVTGLFLKETLHRMQEVVQRRQAHREHGGTVVYDENLPDSLERREPAPHEGQVRFGGTGALGVAPAAATPPRETTSAVEDPHAARGRP
Ga0190266_101347161	3300017965	Soil	MAGQNLNWRSGALAASGFGLGVVAGLFLKKAAERTQELGRRKQAHEENERTVTYDENLPDSLERREPAPQAGQPRFGGTGAIGFSPAAATGSAGLKPRPTD
Ga0184628_1000022231	3300018083	Groundwater Sediment	MPQYLSRNGAALTGSAFVAGIVTGLFAREILQRMQELARRKWSHREYERTVTYDENLPDSLERREPAPQPGQPRFGGTGAIGFSPAAATTARARDGER
Ga0190268_113422081	3300018466	Soil	MAGHNLRRNGGATATAAFAVGVVAGLFLKEAVQRLQELARHRQWHRDYERTVTYGANLPDPLERREPAPQPGQPRFGGTGALGVAPAAAATPSEASAVEDPHAPRGRP
Ga0190270_101867173	3300018469	Soil	MAGHNLKWSSGAFAASIFGLGVVTGLFLIAAVQRTQEFGRRQRAHRENERTVAYDENLPDSLERREPAPHPGQPRYGGTGALGVSPAAVTPPHGDPRPR
Ga0190274_105495162	3300018476	Soil	MAGHNLKWRSGALAASGFGLGMVAGLLLKKAAERTQELGRRKQAHEENERTVIYNQNLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARPRDPQGS
Ga0190274_107838241	3300018476	Soil	MAGQNLKWRSGALAASGFGLGVVAGLFLKKAAERTQELGRRKQAHRDNERTVTYDENLPDSLERREPAPQEGQPRFGGTGAIGFSPAAATARPRYPQGS
Ga0190274_115880061	3300018476	Soil	MAGWNLRWGTRTGSAFVLGMVAGLVLKEAVQRAQERSRRMGAHREYERTVVYDENLPDSLERREPAPEQGQPRYGGTGAIGFSPAAVTTPSE
Ga0190274_120309162	3300018476	Soil	MAGLNLKWSSGALAASAFGLGVVTGLFLKDAVQRTQELARRKQAHREHEGTVVYDENLPDSLERREPAPQEGQPRYGGTGAIGFSPAAARDPQA
Ga0190271_102443822	3300018481	Soil	MAGQNLNWRSGALAASGFGLGVVAGLFLKNAAERTQELGRRKQAHKENERTVTYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATARPRDQQGS
Ga0190271_104734182	3300018481	Soil	MAGQNLKWRSGALAASGFGLGVIAGLFLKRAVEGTQELGRRKQAHKDNERTVTYDENLPDSLERREPAPQEGQPRFGGTGAIGFSSAAATAPRRYPQGS
Ga0173479_100523323	3300019362	Soil	MAGQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQGS
Ga0247779_11235161	3300022908	Plant Litter	MAEQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQGS
Ga0207682_101245371	3300025893	Miscanthus Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK
Ga0207682_102582891	3300025893	Miscanthus Rhizosphere	MAEQNLKWRSGALAASGFGLGMVAGLFLRKAAERTQELGRRKQAHEENERTVIYNENLPDPLERREPAPHEGQPRFGGTGAIGFSPAAATTARSRDPQG
Ga0207645_101046392	3300025907	Miscanthus Rhizosphere	MAGQNLKWRSGAFAASVFGLGVVTGLFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR
Ga0207643_100655142	3300025908	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTP
Ga0207643_101088562	3300025908	Miscanthus Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPPE
Ga0207643_101429892	3300025908	Miscanthus Rhizosphere	MAGWNLRWGTGAGSAFVLGMLAGLVLKEAVQRAQDLAQRKYAHRERENTVAFDDNLPDALERREPAPAPGQPRYGGTGAIGFSPAAVKTPSE
Ga0207681_100519013	3300025923	Switchgrass Rhizosphere	MPNLRWEGLGAGPAFMLGVVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVTPPSK
Ga0207659_102447372	3300025926	Miscanthus Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTG
Ga0207687_107056733	3300025927	Miscanthus Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAEGQPRYGGTGAIGFSPAAVTPPSKE
Ga0207644_104527602	3300025931	Switchgrass Rhizosphere	MALWNLRWGTGTGSAFVLGLVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPDALERREPAPAQGQPRYGGTGAIGFSPAAVTPPSKE
Ga0207669_117578842	3300025937	Miscanthus Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVV
Ga0207689_102251982	3300025942	Miscanthus Rhizosphere	MAGQNLRWGSGAGSAFVVGLVAGLFLKEAVRRGQQLVRRKYAHREREHTVAFDENLPDALERREPVPEPGQPRYGGTGAIGFSPAAVTPPSE
Ga0207658_103576513	3300025986	Switchgrass Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPVEGQPRYGGTGAIGFSPAAVTPPSK
Ga0207658_107455332	3300025986	Switchgrass Rhizosphere	MGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE
Ga0207703_106812302	3300026035	Switchgrass Rhizosphere	MALWNLRWGTGSASAFALGMVAGLFLKEAVQRAQERARRQGAHRDYERTVAFEDNLPDSLERREPAPAEGQPRYGGTGAIGFSPAAVAPPSK
Ga0207708_103203952	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGSFSEQERRSIAQTAARHVDGR
Ga0207708_118107372	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	NLKWRSGAFAASVFGLGVVTGLFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR
Ga0207641_106412761	3300026088	Switchgrass Rhizosphere	RRMRRESLMAGWNLRWGTGAGSAFVLGMLAGLVLKEAVQRAQDLAQRKYAHRERENTVAFDDNLPDALERREPAPAPGQPRYGGTGAIGFSPAAVRTPSE
Ga0207675_1010522362	3300026118	Switchgrass Rhizosphere	MALWNLRWGTAGSAFVLGMVAGLFLKEAVQRAQEVARRKYAHSEREQTIAFDENLPEALERREPAPGEGQPRYGGTGAIGFSPAAVTPPSK
Ga0207683_109488271	3300026121	Miscanthus Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYG
Ga0209486_1000051612	3300027886	Agricultural Soil	MAGLNLMRNGGVRAGSAFALGVVTGLFLKETLHRMQEVVQRRQAHREHEGTVVYDENLPDSLERREPAPHEGQVRFGGTGALGVAPAAAATARETTSPVEDPHAPRDRP
Ga0207428_110483702	3300027907	Populus Rhizosphere	RNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE
Ga0268266_110500052	3300028379	Switchgrass Rhizosphere	MAGRNLRWGMGAGSTFVLGVVAGLFLREAVQRVREVARRKYAHREREHTIAFDENLPDALERREPAPEPGQPRYGGTGAIGFSPTVVPRPSE
Ga0268264_102554602	3300028381	Switchgrass Rhizosphere	MAGHNLRRGSAQGLSWFVVGVVAGLFLKEALQKVQERVRRKNAHLDYERTVSYDENLPDALERREPAPQPDQPRFGGTGAIGFSPTAAMPEPRNN
Ga0310907_105930771	3300031847	Soil	MARQAASAFVLGVVTGLFLKEVVQHGQQFARRAWAHRENENTVTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT
Ga0310900_114624691	3300031908	Soil	MAVQHIRRSSAVPAASAFVIGVVTGLFLKEAVNRGQQFARRKWANRESARTLTYDENLPDSLERREPAPQVGQPRFGGTGAIGFSPAAATEPVGRKPT
Ga0310885_101205002	3300031943	Soil	MAGQNLKWRSGAFAASVFGLGVVTGVFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR
Ga0310903_103006391	3300032000	Soil	AASVFGLGVVTGVFLKAAVQRTQELARHKHAHRENERTVTYDENLPDSLERREPVPHPGQPRYGGTGALGISPAAVTPPHGVPRPR
Ga0310902_104712212	3300032012	Soil	MARQAASAFVLGVVTGLFLKEVVQHGQQFARRAWAHRENENTVTFGENLPDSLERREPAPQPGQPRFGGTGAIGFSPAAATEPGGRKQT
Ga0310906_107104842	3300032013	Soil	MARQAASAFVLGVVTGLFLKEAVQHGQQFARRTWAHRENENTVTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT
Ga0310895_104303622	3300032122	Soil	MARQAASAFVLGVVTGLFLKEVVQHGQQFARRTWAHRENESTMTFGENLPDSLERREPAPEPGQPRFGGTGAIGFSPAAATEPGGRKQT
Ga0315910_103435302	3300032144	Soil	MGRQAASAFVLGVVTGLFLKEVAQHGQEFARRKRMHREHERTVTYGDNLPDSLERREPAPEAGQPRFGGTGAIGFSPAAATDTEPERT
Ga0315910_109620032	3300032144	Soil	MARQAASAFVLGVVTGLFLKEVVQQGQQLARRKRAHRENESTVTFGENLPDSLERREPAPQPGQPRFGGTGAIGF
Ga0315912_111995051	3300032157	Soil	VKAVAGFALGLVAGLFVKEAVKRMHELARRKQTHRDFERTMIYDENLPEPLERREPAPQPGQPRFGGTGAIGFSPAAAAPPSPGNGVKS
Ga0315912_114648651	3300032157	Soil	MAGQTLQRNRGVTAVSAFALGVAAGLFVKVALQRAQEMRHRQQTRREHEDTVVYDENLPDPLERREPAPHEGQPRYGGTGAIGFPPAAATPKS
Ga0307472_1026274452	3300032205	Hardwood Forest Soil	MAGQTLQRNRGVMAVAAFAFGVVAGVFVKVALQRAQEMRQRWQTNREHQDTVVYDENLPEPLERREPAPHEGQPRYGGTGAI

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085756

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences