Metagenome / Metatranscriptome Family F085667

Basic Information
Family ID	F085667
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	117 residues
Representative Sequence	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGL
Number of Associated Samples	100
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.72 %
% of genes near scaffold ends (potentially truncated)	94.59 %
% of genes from short scaffolds (< 2000 bps)	80.18 %
Associated GOLD sequencing projects	92
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Bacteria (54.955 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (10.811 % of family members)
Environment Ontology (ENVO)	Unclassified (31.532 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (42.342 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 75.21% β-sheet: 0.85% Coil/Unstructured: 23.93%
Feature Viewer

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Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF01145	Band_7	23.42
PF00005	ABC_tran	5.41
PF13442	Cytochrome_CBB3	1.80
PF12804	NTP_transf_3	0.90
PF05128	DUF697	0.90
PF13471	Transglut_core3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3768	Uncharacterized membrane protein YcjF, UPF0283 family	Function unknown [S]	0.90

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	54.95 %
Unclassified	root	N/A	45.05 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.25 %
Unclassified	root	N/A	45.05 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	52.25 %
Unclassified	root	N/A	45.05 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	14.41 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4.50 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.90 %
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	8.11 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	6.31 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.60 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.90 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	8.11 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.60 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.90 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	8.11 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.60 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.90 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	45.05 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	7.21 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3.60 %
Rhodoplanes sp.	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	0.90 %
Bradyrhizobium icense	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	0.90 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.90 %
Alphaproteobacteria bacterium 13_2_20CM_2_64_7	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2166559005\|cont_contig43550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	928	Open in IMG/M
2166559005\|cont_contig68669	Not Available	745	Open in IMG/M
3300004024\|Ga0055436_10132461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	751	Open in IMG/M
3300004479\|Ga0062595_100092786	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7	1574	Open in IMG/M
3300005162\|Ga0066814_10006784	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1285	Open in IMG/M
3300005163\|Ga0066823_10036731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	836	Open in IMG/M
3300005163\|Ga0066823_10057917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	716	Open in IMG/M
3300005204\|Ga0068997_10080508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	677	Open in IMG/M
3300005328\|Ga0070676_10044735	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2577	Open in IMG/M
3300005329\|Ga0070683_102313569	Not Available	515	Open in IMG/M
3300005332\|Ga0066388_102659068	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	912	Open in IMG/M
3300005332\|Ga0066388_108701620	Not Available	504	Open in IMG/M
3300005339\|Ga0070660_100353430	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1210	Open in IMG/M
3300005343\|Ga0070687_100269901	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1066	Open in IMG/M
3300005354\|Ga0070675_101192808	Not Available	701	Open in IMG/M
3300005366\|Ga0070659_100054644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3145	Open in IMG/M
3300005435\|Ga0070714_100740598	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	950	Open in IMG/M
3300005437\|Ga0070710_10028492	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	2988	Open in IMG/M
3300005439\|Ga0070711_100825165	Not Available	788	Open in IMG/M
3300005466\|Ga0070685_10011372	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	4661	Open in IMG/M
3300005543\|Ga0070672_100219592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1594	Open in IMG/M
3300005713\|Ga0066905_100148736	All Organisms → cellular organisms → Bacteria	1683	Open in IMG/M
3300005718\|Ga0068866_10651816	Not Available	717	Open in IMG/M
3300005719\|Ga0068861_101319677	Not Available	702	Open in IMG/M
3300005764\|Ga0066903_105568460	Not Available	663	Open in IMG/M
3300006041\|Ga0075023_100447925	Not Available	570	Open in IMG/M
3300006051\|Ga0075364_10781473	Not Available	651	Open in IMG/M
3300006057\|Ga0075026_100373504	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	795	Open in IMG/M
3300006580\|Ga0074049_12129190	Not Available	633	Open in IMG/M
3300006854\|Ga0075425_100102674	All Organisms → cellular organisms → Bacteria	3253	Open in IMG/M
3300006871\|Ga0075434_100455274	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1301	Open in IMG/M
3300006903\|Ga0075426_10298396	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1179	Open in IMG/M
3300009101\|Ga0105247_10402708	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	975	Open in IMG/M
3300009156\|Ga0111538_10119228	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	3352	Open in IMG/M
3300009792\|Ga0126374_10810160	Not Available	716	Open in IMG/M
3300010043\|Ga0126380_12269732	Not Available	503	Open in IMG/M
3300010046\|Ga0126384_10327537	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1269	Open in IMG/M
3300010048\|Ga0126373_13122175	Not Available	516	Open in IMG/M
3300010358\|Ga0126370_10425339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1099	Open in IMG/M
3300010358\|Ga0126370_11904830	Not Available	578	Open in IMG/M
3300010359\|Ga0126376_10013965	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5081	Open in IMG/M
3300010360\|Ga0126372_10083526	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2333	Open in IMG/M
3300010360\|Ga0126372_11683050	Not Available	675	Open in IMG/M
3300010397\|Ga0134124_10143865	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2120	Open in IMG/M
3300010398\|Ga0126383_10069967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3013	Open in IMG/M
3300010398\|Ga0126383_13007601	Not Available	550	Open in IMG/M
3300010399\|Ga0134127_10955376	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	915	Open in IMG/M
3300010400\|Ga0134122_11165434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	769	Open in IMG/M
3300011106\|Ga0151489_1070762	Not Available	614	Open in IMG/M
3300011107\|Ga0151490_1220880	Not Available	574	Open in IMG/M
3300012502\|Ga0157347_1077356	Not Available	501	Open in IMG/M
3300012958\|Ga0164299_10433774	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	854	Open in IMG/M
3300012961\|Ga0164302_10476089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	875	Open in IMG/M
3300012971\|Ga0126369_12950529	Not Available	557	Open in IMG/M
3300012988\|Ga0164306_11165344	Not Available	644	Open in IMG/M
3300013307\|Ga0157372_12648101	Not Available	575	Open in IMG/M
3300014321\|Ga0075353_1047998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	879	Open in IMG/M
3300014326\|Ga0157380_11179547	Not Available	808	Open in IMG/M
3300015371\|Ga0132258_10291371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	4010	Open in IMG/M
3300015371\|Ga0132258_11757620	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1563	Open in IMG/M
3300015372\|Ga0132256_101015656	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	945	Open in IMG/M
3300015374\|Ga0132255_105676908	Not Available	528	Open in IMG/M
3300017944\|Ga0187786_10594660	Not Available	519	Open in IMG/M
3300017966\|Ga0187776_10981055	Not Available	619	Open in IMG/M
3300017974\|Ga0187777_10232967	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1247	Open in IMG/M
3300018060\|Ga0187765_10014355	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3650	Open in IMG/M
3300018060\|Ga0187765_10351799	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	897	Open in IMG/M
3300018060\|Ga0187765_11308592	Not Available	513	Open in IMG/M
3300018064\|Ga0187773_10962667	Not Available	556	Open in IMG/M
3300019877\|Ga0193722_1077681	Not Available	818	Open in IMG/M
3300020018\|Ga0193721_1148159	Not Available	568	Open in IMG/M
3300025549\|Ga0210094_1018271	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1111	Open in IMG/M
3300025560\|Ga0210108_1017408	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	1285	Open in IMG/M
3300025903\|Ga0207680_10090223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1947	Open in IMG/M
3300025905\|Ga0207685_10064160	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1466	Open in IMG/M
3300025907\|Ga0207645_10757210	Not Available	660	Open in IMG/M
3300025911\|Ga0207654_10257118	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1173	Open in IMG/M
3300025915\|Ga0207693_11129792	Not Available	594	Open in IMG/M
3300025916\|Ga0207663_10176086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1523	Open in IMG/M
3300025918\|Ga0207662_10763947	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium icense	680	Open in IMG/M
3300025921\|Ga0207652_11583789	Not Available	559	Open in IMG/M
3300025922\|Ga0207646_11072338	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	710	Open in IMG/M
3300025926\|Ga0207659_11722117	Not Available	533	Open in IMG/M
3300025927\|Ga0207687_10027083	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3844	Open in IMG/M
3300025928\|Ga0207700_10373074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1246	Open in IMG/M
3300025938\|Ga0207704_10326024	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1186	Open in IMG/M
3300025939\|Ga0207665_10035867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	3294	Open in IMG/M
3300025941\|Ga0207711_11548072	Not Available	606	Open in IMG/M
3300025944\|Ga0207661_10098826	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2446	Open in IMG/M
3300025945\|Ga0207679_10111829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2157	Open in IMG/M
3300025961\|Ga0207712_10093473	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	2219	Open in IMG/M
3300026118\|Ga0207675_100744501	Not Available	991	Open in IMG/M
3300026475\|Ga0257147_1031947	Not Available	759	Open in IMG/M
3300027646\|Ga0209466_1058308	Not Available	780	Open in IMG/M
3300031198\|Ga0307500_10227459	Not Available	567	Open in IMG/M
3300031199\|Ga0307495_10000100	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	6238	Open in IMG/M
3300031455\|Ga0307505_10371325	Not Available	678	Open in IMG/M
3300031771\|Ga0318546_10995226	Not Available	590	Open in IMG/M
3300031831\|Ga0318564_10283604	Not Available	733	Open in IMG/M
3300032000\|Ga0310903_10547502	Not Available	610	Open in IMG/M
3300032174\|Ga0307470_10398624	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	972	Open in IMG/M
3300033004\|Ga0335084_10217459	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp.	1983	Open in IMG/M
3300033290\|Ga0318519_10678007	Not Available	629	Open in IMG/M
3300033475\|Ga0310811_10681515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1001	Open in IMG/M
3300033807\|Ga0314866_077596	Not Available	576	Open in IMG/M
3300034090\|Ga0326723_0251926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	787	Open in IMG/M
3300034817\|Ga0373948_0069683	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	786	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	68.47%
Host-Associated	Host-Associated	29.73%
Engineered	Engineered	1.80%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	63.06%
Plants	Host-Associated → Plants	29.73%
Aquatic	Environmental → Aquatic	5.41%
Modeled	Engineered → Modeled	1.80%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	61.26%
Rhizosphere	Host-Associated → Plants → Rhizosphere	21.62%
Rhizoplane	Host-Associated → Plants → Rhizoplane	6.31%
Marine	Environmental → Aquatic → Marine	3.60%
Sediment	Environmental → Aquatic → Sediment	1.80%
Roots	Host-Associated → Plants → Roots	1.80%
Simulated Communities (Sequence Read Mixture)	Engineered → Modeled → Simulated Communities (Sequence Read Mixture)	1.80%
Peat	Environmental → Terrestrial → Peat	0.90%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.23%
Loam	Environmental → Terrestrial → Soil → Loam	18.02%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	10.81%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.81%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	9.01%
Wetlands	Environmental → Aquatic → Marine → Wetlands	3.60%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified	1.80%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.90%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	27.93%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	13.51%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	10.81%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.81%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	9.01%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	4.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.50%
Unclassified	Environmental → Aquatic → Marine → Wetlands → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	3.60%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.80%
Unclassified	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified	1.80%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.90%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.90%
Unclassified	Host-Associated → Plants → Roots → Rhizosphere → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	10.81%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.01%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.21%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.41%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.50%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	4.50%
Natural And Restored Wetlands	Environmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands	3.60%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.60%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.70%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.70%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.70%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.70%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.70%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.80%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.80%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.80%
Simulated	Engineered → Modeled → Simulated Communities (Sequence Read Mixture) → Unclassified → Unclassified → Simulated	1.80%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%
Natural And Restored Wetlands	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Natural And Restored Wetlands	0.90%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.90%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.90%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.90%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.90%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Unclassified → Arabidopsis Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2166559005	Simulated microbial communities from Lyon, France	Engineered	Open in IMG/M
3300004024	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005162	Soil and rhizosphere microbial communities from Laval, Canada - mgLAB	Environmental	Open in IMG/M
3300005163	Soil and rhizosphere microbial communities from Laval, Canada - mgHMB	Environmental	Open in IMG/M
3300005204	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleA_D2	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005718	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006041	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014	Environmental	Open in IMG/M
3300006051	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-4	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006580	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPC (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009101	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011000	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t6i015	Environmental	Open in IMG/M
3300011106	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLMC (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011107	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAC (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300012502	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.yng.040610	Host-Associated	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014321	Natural and restored wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Sandmound_TuleB_D1	Environmental	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017944	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_10_20_MG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018060	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_10_MG	Environmental	Open in IMG/M
3300018064	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MG	Environmental	Open in IMG/M
3300019877	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2m1	Environmental	Open in IMG/M
3300020018	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2s2	Environmental	Open in IMG/M
3300025549	Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2 (SPAdes)	Environmental	Open in IMG/M
3300025560	Wetland microbial communities from the San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_ThreeSqB_D2 (SPAdes)	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025905	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025921	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025944	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026475	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - CO-12-A	Environmental	Open in IMG/M
3300027646	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes)	Environmental	Open in IMG/M
3300031198	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 14_S	Environmental	Open in IMG/M
3300031199	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300032000	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D3	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300033004	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.4	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300033807	Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_10	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
cont_0550.00003110	2166559005	Simulated	MFTGRWLFLLTILVGILAYVVGLNVGYLDIAGARQLTQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNVKPNQSMIVAAGRLTVGLIGAPTNESVNININWESAFGRHWRYHQ
cont_0669.00004950	2166559005	Simulated	VTDTRESVQEKSRLGRLFAGRWLFLITILVGIGAYVVGLNVGYLDIAGARQFIQQLRADNQKLKAQIADLNTTQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVAS
Ga0055436_101324611	3300004024	Natural And Restored Wetlands	MEACRVIAPRFAKESQVTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQIATQVALQTKLSTTEAALEAIVPSKNTYNIKPNQSLIVAGGRLTIGLVGAPTNDNVNININGKQQSVATGDVINIALDPPTTCQ
Ga0062595_1000927861	3300004479	Soil	VTETTGSRQSAQTRSRLHRVFTSRQSRWLLVIAILVGIGGYVVGLNIAYLDIAAARQAIQTLRADNQKLKTQISDQNATQVALQNKLTTTEASLEAIVPSKNTYDIKPNQSMIVA
Ga0066814_100067841	3300005162	Soil	VTETTEARQPTRSRLSRMFAAQPRWWLFIFAILLGIGSYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPSKNTYI
Ga0066823_100367312	3300005163	Soil	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLT
Ga0066823_100579171	3300005163	Soil	VTDTRESGQIKSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNTTQVALQNKLSTFEAALDE
Ga0068997_100805081	3300005204	Natural And Restored Wetlands	MEACRVIAPRFAKESQVTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQIATQVALQTKLSTTEAALEAIVPSKNTYNIKPNQSLIVAGGRLTIGLVGAPTNDNVNIN
Ga0070676_100447351	3300005328	Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGMIGAPTNENITINV
Ga0070683_1023135692	3300005329	Corn Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGL
Ga0066388_1026590682	3300005332	Tropical Forest Soil	MTDAQQTIKPRSFLYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLT
Ga0066388_1087016202	3300005332	Tropical Forest Soil	MTDAQQTIQPRSFLYRMFTGRWLFLLTILVGVVAYIIGLNVGYLDLAGARQLIQQLRTENQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKN
Ga0070660_1003534301	3300005339	Corn Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQTA
Ga0070687_1002699012	3300005343	Switchgrass Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAAMDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTN
Ga0070675_1011928081	3300005354	Miscanthus Rhizosphere	MTNAQQTIQPRSFLYRIFAGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEVIPSKNTYNIKPNQSMIV
Ga0070659_1000546443	3300005366	Corn Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAA
Ga0070714_1007405981	3300005435	Agricultural Soil	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGSYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVNININGKQQTA
Ga0070710_100284923	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMI
Ga0070711_1008251652	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAQQTIRPRAFVYRMFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRSDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAA
Ga0070685_100113721	3300005466	Switchgrass Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVG
Ga0070672_1002195922	3300005543	Miscanthus Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGR
Ga0066905_1001487361	3300005713	Tropical Forest Soil	VSDTTGSQRPRSRLRRLLEASPGRLLLLVAALVGIGSYIVGLNVGYLDIAGARQVIQSLRADNQKLKTELADQNAKHAVMQTKLVNAQAALDAIIPTQNTYNIKPNQSMI
Ga0068866_106518162	3300005718	Miscanthus Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVNININGKQQTAAPGDVIKVTLDPSTVCQ
Ga0068861_1013196772	3300005719	Switchgrass Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGSYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQ
Ga0066903_1055684601	3300005764	Tropical Forest Soil	VTDPRQSVQTRSWLYRLLSGRWLFLLTILVGIGAYVIGLNVGYLDLAGARQLIQQLRSDNQKLKSEISDLNATQVALQNKLSTFEAALDEIIPSKNTYNIKPNESMIVASGRLTIGLVGPPSNDSVNININGKQQS
Ga0075023_1004479252	3300006041	Watersheds	VTETMESPQARSRLSRMFAAQPRWWLFIFAILVGIGSYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLATFEAALDEIIPSKNTYIIKPNQSMIVAS
Ga0075364_107814732	3300006051	Populus Endosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIV
Ga0075026_1003735042	3300006057	Watersheds	VTDTRESVQEKSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAK
Ga0074049_121291902	3300006580	Soil	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPT
Ga0075425_1001026743	3300006854	Populus Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKN
Ga0075434_1004552742	3300006871	Populus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTNENITINV
Ga0075426_102983962	3300006903	Populus Rhizosphere	MTDAQQTIRPRAFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTNENITINV
Ga0075424_1003796212	3300006904	Populus Rhizosphere	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEA
Ga0105247_104027081	3300009101	Switchgrass Rhizosphere	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVG
Ga0111538_101192281	3300009156	Populus Rhizosphere	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAG
Ga0126374_108101602	3300009792	Tropical Forest Soil	MFTGRWLFLLTILVGVIAYIIGLNVGYLDLAGARQLVQQLRTENQKLKTQIADLNATQVALQNRLSIFEAALDEIIPSKNTYNIK
Ga0126380_122697321	3300010043	Tropical Forest Soil	VFTGRWLFLIAILVGIGAYVIGLNVGYLDIAGARQVIQQLRADNQKLKTEIADLNATQVALQNRLTTFEAALDEIIPSKNTYNIKPNQSMIVASGRLTVGLVGPPTNDSVNININGKQQSAASGDVIKVTLDPSTTC
Ga0126384_103275372	3300010046	Tropical Forest Soil	MFTGRWLFLLTILVGVIAYIIGLNVGYLDLAGARQLVQQLRTENQKLKTQIADLNATQVALQNRLSIFEAALDEIIPSKNTYNIKPNQSMIVA
Ga0126373_131221751	3300010048	Tropical Forest Soil	VTDTRPLVQTRSRLYRLFTGRWLFLLAILAAIICYVIGLNVGYLDIAGARQLIQQLRADNQKLKTEIADLNATQVALQNKLSTFEAALDEIIPSKNTYNIKPNQSMIVASGRLTIGL
Ga0126370_104253392	3300010358	Tropical Forest Soil	MFTGRWLFLLTILVGVIAYIIGLNVGYLDLAGARQLVQQLRTENQKLKTQIADLNATQVALQNRLSIFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLVGAPTNENIT
Ga0126370_119048301	3300010358	Tropical Forest Soil	VTETIKPTQSVGARLYRIIATRPGWSLAIVAILVGICSYVIGLNVGYLDIASARQTIQQLRADNQKLKVQISDLNATQVALQNRLSTFEAALDEIIPSKNIYNIKPNQ
Ga0126376_100139658	3300010359	Tropical Forest Soil	VTDTRPLVQTRSRLYRLFTGRWLFLLAILAAIICYVIGLNVGYLDIAGARQLIQQLRADNQKLKTEIADLNATQVALQNKLSTFEAALDEIIPSKNTYNIK
Ga0126372_100835263	3300010360	Tropical Forest Soil	MFTGRWLFLLTILVGVIAYIIGLNVGYLDLAGARQLVQQLRTENQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLVGAPTNENITINV
Ga0126372_116830502	3300010360	Tropical Forest Soil	MFTGRWLFLLTILVGVIAYLVGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTIGLIGAPTNENVTINV
Ga0134124_101438653	3300010397	Terrestrial Soil	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQ
Ga0126383_100699671	3300010398	Tropical Forest Soil	VTDIRQPVRARSWLYRLFTGRWLFLITILIGIGCYVIGLNVGYLDIAGARQLIQQLRADNQKLKAEIADLNTTQVALQNKLSTFEAALDEIIPSKNSYNIKPNQSMIVASGRLTVGLVGAPSNDSVNININGRQQAAATGDVIKVALDPS
Ga0126383_130076011	3300010398	Tropical Forest Soil	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLVGAPTNENITIN
Ga0134127_109553761	3300010399	Terrestrial Soil	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVNININGKQQTAAPGDVIKVTLDPST
Ga0134122_111654342	3300010400	Terrestrial Soil	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKP
Ga0138513_1000208401	3300011000	Soil	LFLFALLAAIGSYVVGLNVGYLDIAGARQLIQQLRTDNQKLKAQISDLNATQVALQNRLSTFEASLDEIIP
Ga0151489_10707622	3300011106	Soil	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQS
Ga0151490_12208801	3300011107	Soil	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKIQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTNEN
Ga0157347_10773562	3300012502	Arabidopsis Rhizosphere	MFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIV
Ga0164299_104337742	3300012958	Soil	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVAS
Ga0164302_104760892	3300012961	Soil	MTDAQQTIQPRSFLYRIFAGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEVIPSKNTYNIKPNQSM
Ga0126369_129505291	3300012971	Tropical Forest Soil	LDIAGARQAIQQLRSENQKLKIQITELNATQVALQNKLSTFEAALDEIIPAKDTYNVKPNQSMIVAAGKLTIALVGPPANDSLNININGKQHTAASGDTISVPVDQQTTCQVRVQSFYMFKAVIQAFCPPQPK*
Ga0164306_105441991	3300012988	Soil	VFTSRQSRWLLVIAILVGIGGYVVGLNIAYLDIAAARQAIQTLRADNQKLKTQISDQNATQVALQNKLTTTEASLE
Ga0164306_111653441	3300012988	Soil	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVNININ
Ga0157372_126481011	3300013307	Corn Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPN
Ga0075353_10479982	3300014321	Natural And Restored Wetlands	MEACRVIAPRFAKESQVTDTTELRQTVKSRLYRLLTAHRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQSATQIALQTKLSTTEAALEAIVPSKNTYNIKPNQSLIVAGGRLTIGLVGSPTNDSVNININGKQQSAATGNVINIALDPPLT
Ga0157380_111795472	3300014326	Switchgrass Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVNININGKQQTAAPGDVIKV
Ga0132258_102913715	3300015371	Arabidopsis Rhizosphere	VFTSRQSRWLLVIAILVGIGGYVVGLNIAYLDIAAARQAIQTLRADNQKLKTQISDQNATQVALQNKLTTTEASLEAIVPSKNTYDIKPNQSMI
Ga0132258_117576202	3300015371	Arabidopsis Rhizosphere	MFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRSDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQ
Ga0132256_1001940281	3300015372	Arabidopsis Rhizosphere	MFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRSDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIP
Ga0132256_1010156562	3300015372	Arabidopsis Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQTAATGDVIKVTLDPSTVCQ
Ga0132255_1056769081	3300015374	Arabidopsis Rhizosphere	LFLITILVGIGSYIVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVNININGKQQTAATGD
Ga0187786_105946601	3300017944	Tropical Peatland	VTDTIKPTQSVGARLYRIIASRPGWSLVIVAVLVGVCSYVIGLNVGYLDIASARQTIQQLRADNQKLKVQVTDLNATQVALQNRLATFEAALDEIIPSKNIYNIKPNQSMIVGGGRLTV
Ga0187776_109810551	3300017966	Tropical Peatland	VTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNVGHLDIAAARQAIQQLRADNQKLKTQISDQSATQVALQTKLSTIEAALEAIVPSKNTYNIKPNESLIVAGERLTIGLVGPPTNDTVNINI
Ga0187777_102329671	3300017974	Tropical Peatland	MTDAQQTIGRRSLLYRLFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMI
Ga0187765_100143553	3300018060	Tropical Peatland	MTDAQQTIGRRSLLYRLFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSTFEAALDEII
Ga0187765_103517991	3300018060	Tropical Peatland	MLLLAILAGIVCYIIGLNVGYLDLAGARQLIQQLRAENQKLKTEISDLNATQVALQNKLSTFESALDEIIPSKNTYNIKPNQSMIVASGRLTVG
Ga0187765_113085921	3300018060	Tropical Peatland	VLEPRKSVRVKLYRKFAAQPGSWLLIIAILVGIGCYVIGLNVAYIDIAGTQQTIQQLRADNQKQKTQISDLNATQVALQNKLATFEAALDEVIPSKNTYNLKANQSMIVASGRL
Ga0187773_109626671	3300018064	Tropical Peatland	VTETTESRQSVQTRSRLYRLSMAYQGRLLLVVAMLGGIGTYVVGLNIGHLDIAATRQANEQLRSDNQKLKVQISGQIVRQAALQAKLTSAQAALDAIIPSENTYNIKPNQSMIVAGGRLTVGLVGPPTNESVNININGKRQSAATGDVINIALDPSTTCQ
Ga0193722_10776811	3300019877	Soil	MTNAEQSIRPRSFLYRMFTGRWLFLLTILVGILAYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNVKPNQSMIVATGRLTVGLIGAPTNESVN
Ga0193721_11481592	3300020018	Soil	MTDAEQVIRPRSFLYRIFTGRWLFLMTVLVGVIAYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTIGLIGAPTNESVNINVN
Ga0210094_10182711	3300025549	Natural And Restored Wetlands	VQLLCWDTSKGHCFSNCLLIRKSAIMEACRVIAPRFAKESQVTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQIATQVALQTKLSTTEAALEAIVPSKNTYNIKPNQSLI
Ga0210108_10174081	3300025560	Natural And Restored Wetlands	VQLLCWDTSKGHCFSNCLLIRKSAIMEACRVIAPRFAKESQVTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQIATQVALQTKLSTTEAALEAIVPSKNTYNIKPNQSLIVAGGRLTIGLVGAPTNDNVNININGKQQSVATGDVINIALDP
Ga0207680_100902231	3300025903	Switchgrass Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTN
Ga0207685_100641602	3300025905	Corn, Switchgrass And Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLI
Ga0207645_107572101	3300025907	Miscanthus Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTSA
Ga0207654_102571182	3300025911	Corn Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASG
Ga0207693_111297922	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVN
Ga0207663_101760861	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVA
Ga0207662_107639471	3300025918	Switchgrass Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYN
Ga0207652_115837892	3300025921	Corn Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQTAATGDVIKVTL
Ga0207646_110723382	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	TVTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLATFESALDEIIQLLPHITAEFLIPEGI
Ga0207659_117221171	3300025926	Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRSDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTN
Ga0207687_100270834	3300025927	Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGMIGAPT
Ga0207700_103730742	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASG
Ga0207704_103260241	3300025938	Miscanthus Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGMIGAPTN
Ga0207665_100358673	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	VTDTRESVQKKSRLGRLFTGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIV
Ga0207711_115480721	3300025941	Switchgrass Rhizosphere	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGAYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTIGLIGPPANDSVNININGKQQTAAPGDVIKVTLDPSTV
Ga0207661_100988263	3300025944	Corn Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTNENITIN
Ga0207679_101118291	3300025945	Corn Rhizosphere	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSK
Ga0207712_100934733	3300025961	Switchgrass Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIFH
Ga0207675_1007445012	3300026118	Switchgrass Rhizosphere	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVIGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQTAATGDVSFESSTMRT
Ga0257147_10319471	3300026475	Soil	VTDTRESVQEKSRLGRLFEGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNTTQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVNININGKQQTA
Ga0209466_10583081	3300027646	Tropical Forest Soil	MTDAQQTIRPRSFLHRMFTGRWLFLLTILVGVIAYIIGLNVGYLDLAGARQLVQQLRTENQKLKTQIADLNATQVALQNRLSIFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLIGAPTNENITI
Ga0307500_102274591	3300031198	Soil	VSGMTNAEQSIRPRSFLYRMFTGRWLFLLTILVGILAYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYN
Ga0307495_100001001	3300031199	Soil	MTNAEQSIRPRSFLYRMFTGRWLFLLTILVGILAYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNVKPNQSMIVAAGRLTVGLI
Ga0307505_103713251	3300031455	Soil	VTDTRESVQKKSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNTTQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLI
Ga0318546_109952262	3300031771	Soil	VTDPRQSVQTRSWLYRLPSGRWLFLLTILVGIGAYVIGLNVGYLDIAGARQLIQQLRSDNQKLKSEISDLNATQVALQNKLSTFEAALDEIIPSKNTYNIK
Ga0318564_102836041	3300031831	Soil	MTDAQQTIQPRSFLYRMFTGRWLFLLTILVGVVAYIIGLNVAYLDIAGARQLIQQLRTENQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAAGRLTVGLVGAPTNE
Ga0310903_105475021	3300032000	Soil	MTDAQQTIRPRSFVYRMFTGRWLFLLTILVGVVAYLIGLNVGYLDIAGARQLIQQLRTDNQKLKTQIADLNATQVALQNRLSVFEAALDEII
Ga0307470_103986241	3300032174	Hardwood Forest Soil	VTDTRESIQRKSRLGRLFEGRWLFLITILVGIASYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNTTQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVNININGKQ
Ga0335084_102174593	3300033004	Soil	MFRAQPRWWLFIFAILLGIGCYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPSKNTYIIKPNQSMIVASGRLTIG
Ga0318519_106780072	3300033290	Soil	MTDAQQTIQPRSFLYRMFTGRWLFLLTILVGVVAYIIGLNVAYLDIAGARQLIQQLRTENQKLKTQIADLNATQVALQNRLSTFEAALDEIIPSKNTYNIKPNQSMIVAA
Ga0310811_106815151	3300033475	Soil	VTDTRESVQKTSRLGRLFAGRWLFLITILVGIGSYVVGLNVGYLDIAGARQFIQQLRADNQKLKTQIADLNATQVALQNKLSTFEAALDEIIPAKNTYNVKPNQSMIVASGRLTVGLIGPPSNDSVTININGKQQTAATGDVIKVTLD
Ga0314866_077596_223_576	3300033807	Peatland	MFAAQPRWWLFILAIAVGIGCYVVGLNVGYLDIAGARQLIQQLRADNQKLKTQISDLNATQVALQNKLATFEAALDEIIPSKNTYNVKPNQSMIVASGRLTIGLVGAPTNESVNINVN
Ga0326723_0251926_2_487	3300034090	Peat Soil	MTDTTESRQTVRSRLYRLLTAQRGRLLLIAAILGGIGCYVIGLNIGHLDIAAARQAIQQLRADNQKLKTQISDQSATQVALQTKLSTTEAALEAIVPSKNTYNIKPNQSLIVAGGRLTIGLVGAPTNDNVNININGKQQSVATGDVINIALDPPTKCQVRVQ
Ga0373948_0069683_3_242	3300034817	Rhizosphere Soil	MFTGRWLFLLTILVGVVAYIIGLNVGYLDIAGARQLIQQLRSDNQKLKTQIADLNATQVALQNRLSVFEAALDEIIPSKN

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085667

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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