Metagenome Family F085610

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085610
Family Type	Metagenome
Number of Sequences	111
Average Sequence Length	75 residues
Representative Sequence	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK
Number of Associated Samples	82
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	3.60 %
% of genes near scaffold ends (potentially truncated)	22.52 %
% of genes from short scaffolds (< 2000 bps)	76.58 %
Associated GOLD sequencing projects	66
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.37

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (52.252 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment (25.225 % of family members)
Environment Ontology (ENVO)	Unclassified (37.838 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Sediment (non-saline) (26.126 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 54.37% β-sheet: 3.88% Coil/Unstructured: 41.75%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.37
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.37
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF00959	Phage_lysozyme	31.53
PF13539	Peptidase_M15_4	17.12
PF00271	Helicase_C	9.01
PF00149	Metallophos	2.70
PF00182	Glyco_hydro_19	1.80
PF13392	HNH_3	1.80
PF08774	VRR_NUC	1.80
PF14437	MafB19-deam	0.90
PF00176	SNF2-rel_dom	0.90
PF04404	ERF	0.90
PF16510	P22_portal	0.90
PF05521	Phage_H_T_join	0.90
PF00476	DNA_pol_A	0.90
PF05565	Sipho_Gp157	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG3179	Chitinase, GH19 family	Carbohydrate transport and metabolism [G]	1.80
COG3979	Chitodextrinase	Carbohydrate transport and metabolism [G]	1.80
COG0749	DNA polymerase I, 3'-5' exonuclease and polymerase domains	Replication, recombination and repair [L]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	53.15 %
Unclassified	root	N/A	46.85 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	52.25 %
Unclassified	root	N/A	46.85 %
Viruses	superkingdom	All Organisms → Viruses	0.90 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	52.25 %
Unclassified	root	N/A	46.85 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	30.63 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2.70 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	15.32 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	9.01 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	9.01 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	8.11 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	3.60 %
Parvularculales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales	0.90 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	9.01 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	3.60 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Parvularculaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae	0.90 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.90 %
Roseobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	9.01 %
Methylorubrum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum	3.60 %
Tabrizicola	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Tabrizicola	0.90 %
Sulfitobacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter	0.90 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	9.01 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	3.60 %
unclassified Tabrizicola	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Tabrizicola → unclassified Tabrizicola	0.90 %
unclassified Sulfitobacter	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter	0.90 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	46.85 %
Geobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	9.01 %
Methylorubrum extorquens	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	3.60 %
Sulfitobacter sp. HI0054	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp. HI0054	0.90 %
Tabrizicola sp. YIM 78059	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Tabrizicola → unclassified Tabrizicola → Tabrizicola sp. YIM 78059	0.90 %
Parvularcula	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	0.90 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.90 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300002471\|metazooDRAFT_1486640	Not Available	931	Open in IMG/M
3300004240\|Ga0007787_10006005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	4651	Open in IMG/M
3300004481\|Ga0069718_10082558	Not Available	678	Open in IMG/M
3300004481\|Ga0069718_10097417	All Organisms → cellular organisms → Bacteria	2158	Open in IMG/M
3300006030\|Ga0075470_10009203	Not Available	3044	Open in IMG/M
3300006030\|Ga0075470_10192773	Not Available	585	Open in IMG/M
3300006641\|Ga0075471_10007547	All Organisms → cellular organisms → Bacteria → Proteobacteria	6848	Open in IMG/M
3300006641\|Ga0075471_10277684	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	856	Open in IMG/M
3300006641\|Ga0075471_10524917	Not Available	585	Open in IMG/M
3300006802\|Ga0070749_10029125	All Organisms → cellular organisms → Bacteria	3458	Open in IMG/M
3300006802\|Ga0070749_10260908	All Organisms → cellular organisms → Bacteria	979	Open in IMG/M
3300006802\|Ga0070749_10281968	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300006802\|Ga0070749_10503020	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	660	Open in IMG/M
3300006805\|Ga0075464_10027681	All Organisms → cellular organisms → Bacteria	2995	Open in IMG/M
3300006805\|Ga0075464_10403014	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Tabrizicola → unclassified Tabrizicola → Tabrizicola sp. YIM 78059	831	Open in IMG/M
3300006805\|Ga0075464_10824702	All Organisms → cellular organisms → Bacteria → Proteobacteria	577	Open in IMG/M
3300006863\|Ga0075459_1031408	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	889	Open in IMG/M
3300006875\|Ga0075473_10243603	All Organisms → cellular organisms → Bacteria	727	Open in IMG/M
3300006917\|Ga0075472_10055191	All Organisms → cellular organisms → Bacteria → Proteobacteria	1889	Open in IMG/M
3300006917\|Ga0075472_10613617	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	545	Open in IMG/M
3300006920\|Ga0070748_1257492	Not Available	626	Open in IMG/M
3300007540\|Ga0099847_1249180	Not Available	510	Open in IMG/M
3300007640\|Ga0070751_1164008	All Organisms → cellular organisms → Bacteria	882	Open in IMG/M
3300009075\|Ga0105090_10170081	Not Available	1356	Open in IMG/M
3300009075\|Ga0105090_10393707	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	845	Open in IMG/M
3300009081\|Ga0105098_10079129	Not Available	1387	Open in IMG/M
3300009081\|Ga0105098_10635906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	560	Open in IMG/M
3300009085\|Ga0105103_10009136	Not Available	4797	Open in IMG/M
3300009085\|Ga0105103_10100119	Not Available	1505	Open in IMG/M
3300009146\|Ga0105091_10011292	All Organisms → cellular organisms → Bacteria	3781	Open in IMG/M
3300009146\|Ga0105091_10081358	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1467	Open in IMG/M
3300009152\|Ga0114980_10318822	Not Available	900	Open in IMG/M
3300009157\|Ga0105092_10748013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Roseobacteraceae → Sulfitobacter → unclassified Sulfitobacter → Sulfitobacter sp. HI0054	571	Open in IMG/M
3300009159\|Ga0114978_10149685	Not Available	1504	Open in IMG/M
3300009160\|Ga0114981_10261845	Not Available	942	Open in IMG/M
3300009160\|Ga0114981_10271000	Not Available	923	Open in IMG/M
3300009163\|Ga0114970_10000142	All Organisms → cellular organisms → Bacteria	48053	Open in IMG/M
3300009165\|Ga0105102_10023857	All Organisms → cellular organisms → Bacteria	2503	Open in IMG/M
3300009165\|Ga0105102_10035027	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	2133	Open in IMG/M
3300009165\|Ga0105102_10105156	All Organisms → cellular organisms → Bacteria	1330	Open in IMG/M
3300009168\|Ga0105104_10297476	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	886	Open in IMG/M
3300009168\|Ga0105104_10462823	Not Available	710	Open in IMG/M
3300009169\|Ga0105097_10070030	Not Available	1902	Open in IMG/M
3300009169\|Ga0105097_10111513	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1498	Open in IMG/M
3300009169\|Ga0105097_10321886	Not Available	855	Open in IMG/M
3300009169\|Ga0105097_10717674	Not Available	566	Open in IMG/M
3300009170\|Ga0105096_10229275	All Organisms → cellular organisms → Bacteria	941	Open in IMG/M
3300009180\|Ga0114979_10139467	Not Available	1487	Open in IMG/M
3300011115\|Ga0151514_10991	Not Available	11127	Open in IMG/M
3300011335\|Ga0153698_1101	Not Available	36194	Open in IMG/M
3300011337\|Ga0153702_1078	Not Available	34532	Open in IMG/M
3300012017\|Ga0153801_1020888	All Organisms → cellular organisms → Bacteria	1164	Open in IMG/M
3300013004\|Ga0164293_10398839	All Organisms → cellular organisms → Bacteria	927	Open in IMG/M
3300013005\|Ga0164292_10353083	Not Available	992	Open in IMG/M
3300014711\|Ga0134314_102533	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1281	Open in IMG/M
3300014711\|Ga0134314_107778	Not Available	698	Open in IMG/M
3300014711\|Ga0134314_109426	Not Available	639	Open in IMG/M
3300015050\|Ga0181338_1037536	Not Available	727	Open in IMG/M
3300017754\|Ga0181344_1062669	Not Available	1100	Open in IMG/M
3300017754\|Ga0181344_1140635	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	690	Open in IMG/M
3300017780\|Ga0181346_1045996	Not Available	1777	Open in IMG/M
3300020048\|Ga0207193_1077546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3191	Open in IMG/M
3300020048\|Ga0207193_1329712	All Organisms → cellular organisms → Bacteria	1061	Open in IMG/M
3300021956\|Ga0213922_1090245	Not Available	628	Open in IMG/M
3300022179\|Ga0181353_1072065	Not Available	881	Open in IMG/M
3300022407\|Ga0181351_1229855	Not Available	594	Open in IMG/M
3300025075\|Ga0209615_102189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1259	Open in IMG/M
3300025445\|Ga0208424_1002323	Not Available	2143	Open in IMG/M
3300025732\|Ga0208784_1009405	Not Available	3349	Open in IMG/M
3300025848\|Ga0208005_1206783	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	609	Open in IMG/M
3300025872\|Ga0208783_10204735	All Organisms → cellular organisms → Bacteria	815	Open in IMG/M
3300025889\|Ga0208644_1079923	Not Available	1677	Open in IMG/M
3300025896\|Ga0208916_10163813	Not Available	958	Open in IMG/M
3300027675\|Ga0209077_1019999	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1787	Open in IMG/M
3300027683\|Ga0209392_1095089	Not Available	950	Open in IMG/M
3300027693\|Ga0209704_1010476	All Organisms → cellular organisms → Bacteria	2197	Open in IMG/M
3300027721\|Ga0209492_1029590	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	1903	Open in IMG/M
3300027721\|Ga0209492_1082319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1136	Open in IMG/M
3300027721\|Ga0209492_1174602	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	744	Open in IMG/M
3300027736\|Ga0209190_1000286	Not Available	36743	Open in IMG/M
3300027743\|Ga0209593_10162070	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Parvularculales → Parvularculaceae → Parvularcula	799	Open in IMG/M
3300027763\|Ga0209088_10008861	Not Available	5508	Open in IMG/M
3300027782\|Ga0209500_10127860	All Organisms → Viruses → Predicted Viral	1223	Open in IMG/M
3300027899\|Ga0209668_10893313	Not Available	599	Open in IMG/M
3300027956\|Ga0209820_1222674	Not Available	528	Open in IMG/M
3300027975\|Ga0209391_10127518	Not Available	1106	Open in IMG/M
3300031758\|Ga0315907_11295614	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	504	Open in IMG/M
3300031999\|Ga0315274_10850118	Not Available	959	Open in IMG/M
3300032116\|Ga0315903_11089066	All Organisms → cellular organisms → Bacteria	550	Open in IMG/M
3300033557\|Ga0316617_100901475	All Organisms → cellular organisms → Bacteria	856	Open in IMG/M
3300033816\|Ga0334980_0116711	All Organisms → cellular organisms → Bacteria → Proteobacteria	1105	Open in IMG/M
3300033981\|Ga0334982_0060033	Not Available	2079	Open in IMG/M
3300033981\|Ga0334982_0237310	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium	883	Open in IMG/M
3300033993\|Ga0334994_0214060	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	1033	Open in IMG/M
3300033996\|Ga0334979_0200224	Not Available	1179	Open in IMG/M
3300034012\|Ga0334986_0080676	Not Available	1988	Open in IMG/M
3300034061\|Ga0334987_0215588	All Organisms → cellular organisms → Bacteria → Proteobacteria	1337	Open in IMG/M
3300034064\|Ga0335001_0021007	All Organisms → cellular organisms → Bacteria	3842	Open in IMG/M
3300034064\|Ga0335001_0047254	All Organisms → cellular organisms → Bacteria	2499	Open in IMG/M
3300034071\|Ga0335028_0530731	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	645	Open in IMG/M
3300034095\|Ga0335022_0019259	Not Available	4464	Open in IMG/M
3300034101\|Ga0335027_0639891	Not Available	641	Open in IMG/M
3300034103\|Ga0335030_0001672	Not Available	18123	Open in IMG/M
3300034104\|Ga0335031_0233071	All Organisms → cellular organisms → Bacteria → Proteobacteria	1229	Open in IMG/M
3300034106\|Ga0335036_0249906	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1202	Open in IMG/M
3300034112\|Ga0335066_0394301	All Organisms → cellular organisms → Bacteria → Proteobacteria	757	Open in IMG/M
3300034116\|Ga0335068_0002083	Not Available	14145	Open in IMG/M
3300034119\|Ga0335054_0097964	Not Available	1806	Open in IMG/M
3300034120\|Ga0335056_0629483	Not Available	551	Open in IMG/M
3300034284\|Ga0335013_0215217	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1266	Open in IMG/M
3300034356\|Ga0335048_0354247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylorubrum → Methylorubrum extorquens	742	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.10%
Terrestrial	Environmental → Terrestrial	0.90%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	76.58%
Marine	Environmental → Aquatic → Marine	22.52%
Soil	Environmental → Terrestrial → Soil	0.90%

Habitat	Taxonomy	Distribution
Lake	Environmental → Aquatic → Freshwater → Lake	33.33%
Sediment	Environmental → Aquatic → Freshwater → Sediment	27.03%
Coastal	Environmental → Aquatic → Marine → Coastal	22.52%
Lentic	Environmental → Aquatic → Freshwater → Lentic	8.11%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified	2.70%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.80%
Creek	Environmental → Aquatic → Freshwater → Creek	0.90%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	30.63%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	27.03%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	22.52%
Unclassified	Environmental → Aquatic → Freshwater → Lentic → Unclassified	6.31%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Unclassified → Unclassified	2.70%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.80%
Epilimnion	Environmental → Aquatic → Freshwater → Lentic → Epilimnion	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	0.90%
Unclassified	Environmental → Aquatic → Freshwater → Creek → Unclassified	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	25.23%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	22.52%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	20.72%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Lake	8.11%
Freshwater Lake	Environmental → Aquatic → Freshwater → Lentic → Unclassified → Freshwater Lake	6.31%
Surface Water	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Surface Water	2.70%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	1.80%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Freshwater Lake Sediment	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.80%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	1.80%
Lake	Environmental → Aquatic → Freshwater → Lentic → Epilimnion → Lake	0.90%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	0.90%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Unclassified → Unclassified → Freshwater	0.90%
Freshwater	Environmental → Aquatic → Freshwater → Creek → Unclassified → Freshwater	0.90%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300002471	Freshwater microbial communities from San Paulo Zoo lake, Brazil - MAY 2013	Environmental	Open in IMG/M
3300004240	Freshwater lake microbial communities from Lake Michigan, USA - Fa13.BD.MLB.SN	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300006030	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_<0.8_DNA	Environmental	Open in IMG/M
3300006641	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006805	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA	Environmental	Open in IMG/M
3300006863	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA	Environmental	Open in IMG/M
3300006875	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA	Environmental	Open in IMG/M
3300006917	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA	Environmental	Open in IMG/M
3300006920	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_12	Environmental	Open in IMG/M
3300007540	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_2 Viral MetaG	Environmental	Open in IMG/M
3300007640	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009152	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_EF_MetaG	Environmental	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009159	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG	Environmental	Open in IMG/M
3300009160	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140806_MF_MetaG	Environmental	Open in IMG/M
3300009163	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG	Environmental	Open in IMG/M
3300009165	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009169	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009170	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009180	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG	Environmental	Open in IMG/M
3300011115	Freshwater viral communities from Lake Soyang, Gangwon-do, South Korea - SYL_2016May	Environmental	Open in IMG/M
3300011335	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Guman	Environmental	Open in IMG/M
3300011337	Lotic viral community from Han River, Hwacheon, Gangwon-do, South Korea - Ilsan	Environmental	Open in IMG/M
3300012017	Freshwater microbial communities from Central Basin Lake Erie, Ontario, Canada - Station 1208 - Top - Depth 1m	Environmental	Open in IMG/M
3300013004	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES118 metaG	Environmental	Open in IMG/M
3300013005	Eutrophic lake water microbial communities from Lake Mendota, Wisconsin, USA - GEODES117 metaG	Environmental	Open in IMG/M
3300014711	Surface water microbial communities from Bangladesh - BaraHaldiaSW0111	Environmental	Open in IMG/M
3300015050	Freshwater viral communities from Lake Michigan, USA - Sp13.VD.MM110.S.D	Environmental	Open in IMG/M
3300017754	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MLB.D.D	Environmental	Open in IMG/M
3300017780	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.D.N	Environmental	Open in IMG/M
3300020048	Microbial communities from Manganika and McQuade lakes, Minnesota, USA Combined Assembly of Gp0225457, Gp0225456, Gp0225455, Gp0225454, Gp0225453, Gp0224915	Environmental	Open in IMG/M
3300021956	Freshwater microbial communities from McNutts Creek, Athens, Georgia, United States - 29-17 MG	Environmental	Open in IMG/M
3300022179	Freshwater viral communities from Lake Michigan, USA - Fa13.VD.MLB.D.N	Environmental	Open in IMG/M
3300022407	Freshwater viral communities from Lake Michigan, USA - Su13.VD.MM15.S.D	Environmental	Open in IMG/M
3300025075	Freshwater bacterial and archeal communities from Indian Creek, Illinois, USA to study Microbial Dark Matter (Phase II) - 4B3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025445	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_0.3_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025732	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025848	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_N_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025872	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_0.19_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300025896	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Spr_0.19_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027693	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 1-3cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027721	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027736	Freshwater microbial communities from Lake Montjoie, Canada to study carbon cycling - M_140205_XF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027763	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140625_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027782	Freshwater microbial communities from Lake Simoncouche, Canada to study carbon cycling - S_140212_EF_MetaG (SPAdes)	Environmental	Open in IMG/M
3300027899	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - PLP11 PL (SPAdes)	Environmental	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300031758	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 12 MA123	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032116	Freshwater fungal communities from buoy surface, Lake Erie, Ohio, United States - Buoy 2 MA119	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M
3300033816	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME16Sep2004-rr0005	Environmental	Open in IMG/M
3300033981	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME24Aug2014-rr0011	Environmental	Open in IMG/M
3300033993	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2012-rr0037	Environmental	Open in IMG/M
3300033996	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME20Jul2016-rr0004	Environmental	Open in IMG/M
3300034012	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME18Aug2017-rr0027	Environmental	Open in IMG/M
3300034061	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Sep2004-rr0028	Environmental	Open in IMG/M
3300034064	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME14Nov2013-rr0054	Environmental	Open in IMG/M
3300034071	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Oct2008D10-rr0110	Environmental	Open in IMG/M
3300034095	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Feb2014D0-rr0091	Environmental	Open in IMG/M
3300034101	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME19Sep2005-rr0107	Environmental	Open in IMG/M
3300034103	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Sep2002-rr0119	Environmental	Open in IMG/M
3300034104	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME02Aug2005-rr0120	Environmental	Open in IMG/M
3300034106	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME23Aug2013-rr0131	Environmental	Open in IMG/M
3300034112	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME27Aug2014-rr0191	Environmental	Open in IMG/M
3300034116	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-CONTROL-GENDONOR	Environmental	Open in IMG/M
3300034119	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME21Jul2015-rr0166	Environmental	Open in IMG/M
3300034120	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME07Aug2014-rr0172	Environmental	Open in IMG/M
3300034284	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME08Jul2016-rr0075	Environmental	Open in IMG/M
3300034356	Freshwater microbial communities from Lake Mendota, Madison, Wisconsin, United States - TYMEFLIES-ME17Jun2014-rr0152	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
metazooDRAFT_14866403	3300002471	Lake	VNWIEIAAIAVLLLGIGAGGFLVAQRPTFWLGLISVGFRAVLPTIIKYAGKRMTPEQELAFRDCVRRGGEWDYTRKRCKR*
Ga0007787_100060057	3300004240	Freshwater Lake	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK*
Ga0069718_100825583	3300004481	Sediment	CRLVLVGQEVNWLEIAAIVVLLVGIGAGGFLVAQRPTFWLGMASAVFMAVLPHLAKRMTPEQEKAFQDCHRRGGEWDHVRKRCRNR*
Ga0069718_100974173	3300004481	Sediment	VNWLEIAAIVVLLVGIGAGGFLVAQRPSFWLGLASAVFMAVLPHLAKRMTPEKEKELQDCLRRGGEWDHFKKRCRNK*
Ga0075470_100092032	3300006030	Aqueous	MTWLEIVAVAVLLLGIGAGGYLVARRPTFWVGLGIAVFNSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0075470_101927732	3300006030	Aqueous	MSWLEIVAVVVLLLGVGAGGYLVAQRPAFWWGLGVVVFRAALPLLAQRMTPEQEKAFQACVRRGGEWDPFRKRCKS*
Ga0075471_100075474	3300006641	Aqueous	MTWLEIVAVAVLLLGIGAGGYLVARRPTFWVGLGIAVFNSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK*
Ga0075471_102776842	3300006641	Aqueous	MSWLEIIAVAVLLLGIGAGGYLVAQRPAFWWGLGAVAFRAALPFLVQRMTPEQEKAFQDCVRRGGEWDPFRKRCKS*
Ga0075471_105249172	3300006641	Aqueous	MTWLEIVAVIVLLLGVGAGGYLVAQRPAFWWGLGAVAFRAALPFLMQRMTPEQEKAFQACVRRGGEWDSFRKRCKS*
Ga0070749_100291257	3300006802	Aqueous	MSWLEIVAVVVLLLGVGAGGYLVAQRPAFWWGLGVVVFRAALPILAQRMTPEQEKAFQACVRRGGEWDPFRKRCKS*
Ga0070749_102609083	3300006802	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGAAVFKSLLPHLAKRMSADQEKAFQDCIRRGGEWDPARKRCK*
Ga0070749_102819682	3300006802	Aqueous	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCR*
Ga0070749_105030202	3300006802	Aqueous	MSWLEIAALAVLFIGIGAGGYLVAQRPTFWFGLGVVVFRAAWPYLSKRMTPEQEKAFQDCVRRGGEWDHFRRRCKR*
Ga0075464_100276814	3300006805	Aqueous	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK*
Ga0075464_104030142	3300006805	Aqueous	MTWLEIAAIAVLLIGIGAGGYLVAQRPTFWAGLVVVVFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDPARKRCR*
Ga0075464_108247023	3300006805	Aqueous	GYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0075459_10314083	3300006863	Aqueous	DRRRHLHGAQQAQGMSWLEIVAVVVLLLGIGAGGYLVAQRPAFWWGLGAVAFRAALPLLAQRMTPEQEKAFRDCVRRGGEWDSFRKRCKS*
Ga0075473_102436033	3300006875	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0075472_100551915	3300006917	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGVAVFKSLLPHLAKRMSADQEKAFQDCIRRGGEWDPARKRCK*
Ga0075472_106136171	3300006917	Aqueous	VTWFEVAALAALVLGIGAAGFLVAQRPAFWVGLGLVMFRAALPHLAKRMTAEQEKAFQDCMRRGGEWDHVRKRCKR*
Ga0070748_12574922	3300006920	Aqueous	MTWLEIAAIAALLVGVGAGGYLVAQRPAFWVGLGVAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCK*
Ga0099847_12491801	3300007540	Aqueous	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWWGLGVIAFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDFQRKRCR*
Ga0070751_11640083	3300007640	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWAGLGVAVFNSLLPHLAKRMTAEQEKAFQDCMRRGGEWDHVRKRCKR*
Ga0105090_101700811	3300009075	Freshwater Sediment	MTWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKTMQDCHRRGGEWDHIRKRCKR*
Ga0105090_103937073	3300009075	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLFPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCR*
Ga0105098_100791291	3300009081	Freshwater Sediment	HLHGAEPAQGMTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKNLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0105098_106359061	3300009081	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFNSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCK*
Ga0105103_100091367	3300009085	Freshwater Sediment	MTWLEIAAIVVLLIGIGGGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCYRRGGEWDHIRKRCKR*
Ga0105103_101001193	3300009085	Freshwater Sediment	IAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLIPHMAKRMTAEEEKAYQDCVRRGGEWDPFRKRCR*
Ga0105091_100112923	3300009146	Freshwater Sediment	MSWLEIAAIVALFIGIGAGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRKRCK*
Ga0105091_100813585	3300009146	Freshwater Sediment	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCR*
Ga0114980_103188223	3300009152	Freshwater Lake	MTWLEIVAVAVLLLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCR*
Ga0105092_107480133	3300009157	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRK
Ga0114978_101496854	3300009159	Freshwater Lake	MTWLEIVAVAVLLLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEQAFHDCVRRGGEWDHIRKRCR*
Ga0114981_102618453	3300009160	Freshwater Lake	LLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCR*
Ga0114981_102710001	3300009160	Freshwater Lake	LLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEQAFHDCVRRGGEWDHIRKRCR*
Ga0114970_1000014235	3300009163	Freshwater Lake	MNWLEIAAIVVLLMGIGAGGYLVAQRPAFWAGLGAVLIKAGWPYILTYISARMTPEQEKEFHDCVRRGGEWDNFRKKCRIK*
Ga0105102_100238573	3300009165	Freshwater Sediment	VNWLEIVAIVVLLIGIGAGGFLVAQRPTFWLGMASAVFMAVLPHLAKRMTPEQEKAFQDCHRRGGEWDHVRKRCRNR*
Ga0105102_100350272	3300009165	Freshwater Sediment	MTWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRKRCK*
Ga0105102_101051564	3300009165	Freshwater Sediment	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0105104_102974763	3300009168	Freshwater Sediment	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCR*
Ga0105104_104628232	3300009168	Freshwater Sediment	MTWLEIAAIVVLLMGVGAGGYLVAQRPTFWVGLGAVLVKAVWPHILKYVSARMTPEQEKEFHDCVKRGGEWDSFRKKCRIK*
Ga0105097_100700303	3300009169	Freshwater Sediment	MTWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRLRCKR*
Ga0105097_101115134	3300009169	Freshwater Sediment	MNWLEIAAIVVLLMGIGAGGYLVAQRPAFWAGLGAVLVKAVWPHILKYVSARMTPEQEKEFHDCVKRGGEWDSFRKKCRIK*
Ga0105097_103218862	3300009169	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCR*
Ga0105097_107176743	3300009169	Freshwater Sediment	MTWLETAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFNSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK*
Ga0105096_102292751	3300009170	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPLLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0114979_101394672	3300009180	Freshwater Lake	MTWLEIAAIVVLLMGIGAGGYLVAQRPAFWAGLGAVLIKAVWPYILKYVSVRMTPEQEKEFHECFRRGGEWDNVRKKCKD*
Ga0151514_109912	3300011115	Freshwater	MTWFEIVAVIILLLGVGAGGYLVAQRPAFWWGLGAVAFRAALPFLVQRMTPEQEKAFQACVRRGGEWDPFRKRCK*
Ga0153698_110133	3300011335	Freshwater	MTWLEIAAIAVLLIGIGAGGYLVAQRPTFWWGLGVIAFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDPMRKRCK*
Ga0153702_107833	3300011337	Freshwater	MTWLEIAAIVVLLIGIGAGGYLVAQRPSFWVGLVVAMFKAALPHLAKRMTAEQEKAYQDCVRRGGEWDFQRKRCR*
Ga0153801_10208882	3300012017	Freshwater	MSWLEIAAIAVLLIGIGAGGYLVAQRPTFWAGLVVAMFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDFQRKRCR*
Ga0164293_103988394	3300013004	Freshwater	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGG
Ga0164292_103530831	3300013005	Freshwater	MTWLEIAAIAVLLIGIGAGGYLVAQRPAFWAGLVVVVFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDFQRKRCR*
Ga0134314_1025331	3300014711	Surface Water	VNWLEIAAIVVLLLGLGAGGFLVAQRPSFWIGLGMELLKGAFPLIVKTVSKRMTPEQEAAFQACVRRGGEWDHAKKKCKD*
Ga0134314_1077783	3300014711	Surface Water	VSWLEIAAVIVLLVGLGGGAFLVAQRPSFWWGLAVEVGKAALPIIAKRMSPEKEAEMHECLRRGGEWDNFRKKCRR*
Ga0134314_1094263	3300014711	Surface Water	FMVARSPTFWIGFGMALFKAALPVITKRMTPEQERAFQDCQRRGGEWDPFRKRCRD*
Ga0181338_10375363	3300015050	Freshwater Lake	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK*
Ga0181344_10626691	3300017754	Freshwater Lake	MSWLEIAAIAVLLIGIGAGGYLVAQRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDP
Ga0181344_11406354	3300017754	Freshwater Lake	GVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRC
Ga0181346_10459963	3300017780	Freshwater Lake	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0207193_10775468	3300020048	Freshwater Lake Sediment	VNWLEIVAIVVLLIGIGAGGFLIAQRPTFWLGMASAVFMAVLPHLAKRMTPEQEKAFQDCRRRGSEWDHVRKRCRNR
Ga0207193_13297123	3300020048	Freshwater Lake Sediment	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCR
Ga0213922_10902453	3300021956	Freshwater	AALALLFIGIGAGGVLAAQRPSFWAGLAVVMFKAALPIISKRMTPEQEADFQKAARRGAEWNPFRKRARNR
Ga0181353_10720654	3300022179	Freshwater Lake	PEPAQGMTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK
Ga0181351_12298552	3300022407	Freshwater Lake	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK
Ga0209615_1021893	3300025075	Freshwater	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0208424_10023233	3300025445	Aqueous	MSWLEIIAVAVLLLGIGAGGYLVAQRPAFWWGLGAVAFRAALPFLVQRMTPEQEKAFQDCVRRGGEWDPFRKRCKS
Ga0208784_10094054	3300025732	Aqueous	MTWLEIVAVAVLLLGIGAGGYLVARRPTFWVGLGIAVFNSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK
Ga0208005_12067833	3300025848	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGVAVFKSLLPHLAKRMSADQEKAFQDCIRRGGEWDPARKRCK
Ga0208783_102047352	3300025872	Aqueous	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGAAVFKSLLPHLAKRMSADQEKAFQDCIRRGGEWDPARKRCK
Ga0208644_10799231	3300025889	Aqueous	MSWLEIIAVAVLLLGIGAGGYLVAQRPAFWWGLGAVAFRAALPFLAQRMTPEQEKAFQACVRRGGEWDPFRK
Ga0208916_101638132	3300025896	Aqueous	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0209077_10199993	3300027675	Freshwater Sediment	MSWLEIAAIVALFIGIGAGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRKRCK
Ga0209392_10950891	3300027683	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFKSLFPHLAKRMTAEQEKAFQDCVRRGGEWDPFR
Ga0209704_10104763	3300027693	Freshwater Sediment	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0209492_10295904	3300027721	Freshwater Sediment	MTWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRKRCK
Ga0209492_10823193	3300027721	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGVAVFNSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK
Ga0209492_11746021	3300027721	Freshwater Sediment	MTWLEIAAIVVLLIGIGGGGYLVAQRPTFWFGLGVVVFKAAWPYLSRRMTPEQEKAMQDCYRRGGEWDHIRKRCKR
Ga0209190_100028630	3300027736	Freshwater Lake	MNWLEIAAIVVLLMGIGAGGYLVAQRPAFWAGLGAVLIKAGWPYILTYISARMTPEQEKEFHDCVRRGGEWDNFRKKCRIK
Ga0209593_101620701	3300027743	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCR
Ga0209088_100088615	3300027763	Freshwater Lake	MTWLEIVAVAVLLLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCR
Ga0209500_101278601	3300027782	Freshwater Lake	MTWLEIVAVAVLLLGVGAGGYLVAQRPTFWVGLGIAVFKSLLPLLAKRMTAEQEQAFHDCVRRGGEWDHIRKRCR
Ga0209668_108933133	3300027899	Freshwater Lake Sediment	MTWLEIAAIIVLLMGIGAGGYLVAQRPTFWVGLIAAMLKAALPFLSKRMTPEQEKAFQDCVRRGGEWDPFRKRCK
Ga0209820_12226742	3300027956	Freshwater Sediment	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGVAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCR
Ga0209391_101275184	3300027975	Freshwater Sediment	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAFQDCVRRGG
Ga0315907_112956142	3300031758	Freshwater	GMTWLEIAALAVMLVGLCAGAFLVSQRPAFWAGLGVVVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0315274_108501181	3300031999	Sediment	MTWLEIAAIVVLLIGIGAGGYLVAQRPTFWVGLGAAMFKAALPHLAKRMTPEQEKAFQDCVRRGGEWDPFRKRCR
Ga0315903_110890661	3300032116	Freshwater	MTWLEIAALAVMLVGLCAGAFLVSQRPAFWVGLGAAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGE
Ga0316617_1009014752	3300033557	Soil	MNWLEIAAIAVLILGICAGGFLVAQRPTFWIGLGSALIKAVLPHVIKYVSARMTPEQEKAYQDCLKRGGEWDNFNKRCKVK
Ga0334980_0116711_52_282	3300033816	Freshwater	MSWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKAMQDCHRRGGQWDHIRKRCKR
Ga0334982_0060033_147_377	3300033981	Freshwater	MTWLEIAAIVVLLIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKAMQDCHRRGGEWDHIRKRCKR
Ga0334982_0237310_97_324	3300033981	Freshwater	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCR
Ga0334994_0214060_477_704	3300033993	Freshwater	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWAGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCR
Ga0334979_0200224_26_253	3300033996	Freshwater	MTWLEIAAIAVLLIGIGAGGYLVAQRPAFWAGLVVVVFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDFQRKRCR
Ga0334986_0080676_1820_1987	3300034012	Freshwater	FLVSQRPAFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0334987_0215588_461_691	3300034061	Freshwater	MTWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKAMQDCHRRGGQWDHIRKRCKR
Ga0335001_0021007_1672_1899	3300034064	Freshwater	MTWLEIAAIVALLVGVGAGGYLVARRPTFWVGLGVAVFNSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK
Ga0335001_0047254_604_831	3300034064	Freshwater	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0335028_0530731_429_644	3300034071	Freshwater	IAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKAMQDCHRRGGQWDHIRKRCKR
Ga0335022_0019259_1493_1720	3300034095	Freshwater	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAFQDCVRRGGEWDPFRKRCK
Ga0335027_0639891_16_270	3300034101	Freshwater	LVVVGQEVNWLEIAAVVVLLVGLGAGGFLVVQRPSFWLGIFSAAFTALLPHITKRMTPEQEKALQECHRRGGNWDHFRKKCRYK
Ga0335030_0001672_13329_13556	3300034103	Freshwater	MTWLEIAAIVALLVGVGAGGYLVAQRPTFWVGLGVAVFKNLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK
Ga0335031_0233071_676_921	3300034104	Freshwater	VGQEVNWLEIAAVVVLLVGLGAGGFLVVQRPSFWLGIFSAALTGLLPHITKRMTPEQEKALQECHRRGGNWDHFKKKCRYK
Ga0335036_0249906_931_1158	3300034106	Freshwater	MTWLEIAAIVALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCR
Ga0335066_0394301_2_202	3300034112	Freshwater	MSWLEIAAIVVLFIGIGAGGYLVAQRPTFWFGLGVVMFKAAWPYLSRRMTPEQEKAMQDCHRRGGQW
Ga0335068_0002083_7730_7957	3300034116	Freshwater	MTWLEIAAIAALLVGVGAGGYLVAQRPTFWVGLGAAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPLRKRCR
Ga0335054_0097964_307_534	3300034119	Freshwater	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGAAVFKSLLPHLAKRMTAEQEKAYQDCVRRGGEWDPFRKRCK
Ga0335056_0629483_247_474	3300034120	Freshwater	MTWLEIAAIAALLVGVGAGGYLVARRPTFWVGLGVAVFNSLLPHLAKRMTAEQEKAFQDCVRRGGEWDPFRKRCK
Ga0335013_0215217_573_800	3300034284	Freshwater	MTWLEIAAIAVLLIGIGAGGYLVAQRPTFWAGLVVVVFKAAWPFLSKRMTPEQEKAFQDCVRRGGEWDFQRKRCR
Ga0335048_0354247_467_694	3300034356	Freshwater	MTWLEIAAIVALLVGVGAGGYLVARRPTFWVGLGVAVFKSLLPHLAKRMTAEEEKAYQDCVRRGGEWDPFRKRCK

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F085610

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences