NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F085489

Metagenome Family F085489

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F085489
Family Type Metagenome
Number of Sequences 111
Average Sequence Length 66 residues
Representative Sequence VTAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSAL
Number of Associated Samples 103
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 82.41 %
% of genes near scaffold ends (potentially truncated) 90.09 %
% of genes from short scaffolds (< 2000 bps) 90.99 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.40

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (82.883 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(22.523 % of family members)
Environment Ontology (ENVO) Unclassified
(19.820 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(42.342 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 28.42%    β-sheet: 10.53%    Coil/Unstructured: 61.05%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.40
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF02371Transposase_20 81.08
PF13683rve_3 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG3547TransposaseMobilome: prophages, transposons [X] 81.08

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms82.88 %
UnclassifiedrootN/A17.12 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003218|JGI26339J46600_10120311All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia629Open in IMG/M
3300004091|Ga0062387_100107747All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1515Open in IMG/M
3300005167|Ga0066672_10041140All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium2600Open in IMG/M
3300005177|Ga0066690_10482419All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria836Open in IMG/M
3300005406|Ga0070703_10045322All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1386Open in IMG/M
3300005437|Ga0070710_10612962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia759Open in IMG/M
3300005445|Ga0070708_102174877All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria513Open in IMG/M
3300005471|Ga0070698_100207952Not Available1892Open in IMG/M
3300005471|Ga0070698_100278045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1606Open in IMG/M
3300006028|Ga0070717_10192229Not Available1783Open in IMG/M
3300006047|Ga0075024_100693524All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia558Open in IMG/M
3300006102|Ga0075015_100127501All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1305Open in IMG/M
3300006791|Ga0066653_10399700All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia702Open in IMG/M
3300006854|Ga0075425_100626741All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1237Open in IMG/M
3300007788|Ga0099795_10508777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300009038|Ga0099829_11074779All Organisms → cellular organisms → Bacteria667Open in IMG/M
3300009525|Ga0116220_10118489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1128Open in IMG/M
3300009623|Ga0116133_1035544All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1232Open in IMG/M
3300009683|Ga0116224_10587820Not Available532Open in IMG/M
3300009698|Ga0116216_10635114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300009839|Ga0116223_10749006Not Available560Open in IMG/M
3300010371|Ga0134125_10457376Not Available1415Open in IMG/M
3300012096|Ga0137389_10243590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 1400100591509Open in IMG/M
3300012199|Ga0137383_11370621All Organisms → cellular organisms → Bacteria501Open in IMG/M
3300012202|Ga0137363_10718244All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria846Open in IMG/M
3300012285|Ga0137370_11010714All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria512Open in IMG/M
3300012355|Ga0137369_11007375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria551Open in IMG/M
3300012356|Ga0137371_11405193All Organisms → cellular organisms → Bacteria512Open in IMG/M
3300012361|Ga0137360_11140050All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria674Open in IMG/M
3300014169|Ga0181531_10510123All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria743Open in IMG/M
3300014489|Ga0182018_10675259All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria539Open in IMG/M
3300014654|Ga0181525_10329948All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria835Open in IMG/M
3300015359|Ga0134085_10559901All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria528Open in IMG/M
3300017657|Ga0134074_1405516All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300017821|Ga0187812_1043822Not Available1516Open in IMG/M
3300017822|Ga0187802_10461533All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria503Open in IMG/M
3300017939|Ga0187775_10002828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4103Open in IMG/M
3300017959|Ga0187779_11177608All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria538Open in IMG/M
3300017973|Ga0187780_10511794All Organisms → cellular organisms → Bacteria858Open in IMG/M
3300017974|Ga0187777_10466930All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria879Open in IMG/M
3300017994|Ga0187822_10163672Not Available722Open in IMG/M
3300017995|Ga0187816_10054206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1681Open in IMG/M
3300018006|Ga0187804_10175527All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria909Open in IMG/M
3300018007|Ga0187805_10274375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria774Open in IMG/M
3300018007|Ga0187805_10476170All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria584Open in IMG/M
3300018043|Ga0187887_10363578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria854Open in IMG/M
3300018046|Ga0187851_10422538All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria761Open in IMG/M
3300018064|Ga0187773_10506789All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria721Open in IMG/M
3300018085|Ga0187772_10937288All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria630Open in IMG/M
3300018086|Ga0187769_10537890All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria882Open in IMG/M
3300018431|Ga0066655_10312382All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1025Open in IMG/M
3300020579|Ga0210407_11179600All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex577Open in IMG/M
3300020581|Ga0210399_11613336All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex500Open in IMG/M
3300020583|Ga0210401_11417375All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria552Open in IMG/M
3300021171|Ga0210405_10355697All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1155Open in IMG/M
3300021180|Ga0210396_10174113All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 1400100591928Open in IMG/M
3300021404|Ga0210389_10675355All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 140010059810Open in IMG/M
3300021405|Ga0210387_10478102All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 1400100591107Open in IMG/M
3300021476|Ga0187846_10049669Not Available1859Open in IMG/M
3300021559|Ga0210409_10465568Not Available1126Open in IMG/M
3300021560|Ga0126371_11332566All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria850Open in IMG/M
3300022731|Ga0224563_1010040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria760Open in IMG/M
3300026317|Ga0209154_1044838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1986Open in IMG/M
3300026322|Ga0209687_1018712All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2277Open in IMG/M
3300026329|Ga0209375_1059250All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex → Mycobacterium canettii → Mycobacterium canettii CIPT 1400100591866Open in IMG/M
3300026551|Ga0209648_10562194All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria635Open in IMG/M
3300027080|Ga0208237_1042249All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300027795|Ga0209139_10322548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300027853|Ga0209274_10742189All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia506Open in IMG/M
3300027905|Ga0209415_10209353Not Available1825Open in IMG/M
3300027905|Ga0209415_10476432All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria972Open in IMG/M
3300028789|Ga0302232_10461428All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300028801|Ga0302226_10469055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300030617|Ga0311356_10755805All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria926Open in IMG/M
3300030617|Ga0311356_11345832All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria651Open in IMG/M
3300031028|Ga0302180_10248138All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300031544|Ga0318534_10550871All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria657Open in IMG/M
3300031545|Ga0318541_10756145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria542Open in IMG/M
3300031564|Ga0318573_10431499All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium709Open in IMG/M
3300031736|Ga0318501_10542059All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria636Open in IMG/M
3300031753|Ga0307477_10314145All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1081Open in IMG/M
3300031754|Ga0307475_10506844All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Corynebacteriales → Mycobacteriaceae → Mycobacterium → Mycobacterium tuberculosis complex969Open in IMG/M
3300031754|Ga0307475_10605066All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria877Open in IMG/M
3300031771|Ga0318546_11117833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria554Open in IMG/M
3300031792|Ga0318529_10599370All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300031798|Ga0318523_10168655Not Available1091Open in IMG/M
3300031835|Ga0318517_10031276All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2138Open in IMG/M
3300031941|Ga0310912_10420552All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1041Open in IMG/M
3300031942|Ga0310916_11186268All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria632Open in IMG/M
3300031946|Ga0310910_10253043Not Available1378Open in IMG/M
3300031962|Ga0307479_11560489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria616Open in IMG/M
3300032039|Ga0318559_10508207All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300032039|Ga0318559_10595513All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria516Open in IMG/M
3300032044|Ga0318558_10499548All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria607Open in IMG/M
3300032059|Ga0318533_10455816All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria936Open in IMG/M
3300032060|Ga0318505_10048813Not Available1807Open in IMG/M
3300032064|Ga0318510_10195531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria815Open in IMG/M
3300032160|Ga0311301_10792542Not Available1304Open in IMG/M
3300032180|Ga0307471_103944689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria524Open in IMG/M
3300032205|Ga0307472_100109278All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1925Open in IMG/M
3300032770|Ga0335085_10248549Not Available2139Open in IMG/M
3300032892|Ga0335081_10370694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia1855Open in IMG/M
3300032892|Ga0335081_11995273All Organisms → cellular organisms → Bacteria619Open in IMG/M
3300032895|Ga0335074_10149653All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales2956Open in IMG/M
3300032955|Ga0335076_10158472All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2177Open in IMG/M
3300033158|Ga0335077_11601638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria619Open in IMG/M
3300033433|Ga0326726_12424723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria509Open in IMG/M
3300033808|Ga0314867_014472Not Available1859Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil22.52%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil8.11%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil8.11%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment6.31%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland6.31%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere6.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.41%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.41%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil5.41%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa4.50%
Bog Forest SoilEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil2.70%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland1.80%
BogEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Bog1.80%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds1.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil1.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.80%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.90%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.90%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.90%
PalsaEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Soil0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.90%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere0.90%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003218Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1EnvironmentalOpen in IMG/M
3300004091Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3EnvironmentalOpen in IMG/M
3300005167Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121EnvironmentalOpen in IMG/M
3300005177Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139EnvironmentalOpen in IMG/M
3300005406Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaGEnvironmentalOpen in IMG/M
3300005437Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaGEnvironmentalOpen in IMG/M
3300005445Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaGEnvironmentalOpen in IMG/M
3300005471Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaGEnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006791Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009523Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaGEnvironmentalOpen in IMG/M
3300009525Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaGEnvironmentalOpen in IMG/M
3300009623Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10EnvironmentalOpen in IMG/M
3300009683Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_b_LC metaGEnvironmentalOpen in IMG/M
3300009698Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaGEnvironmentalOpen in IMG/M
3300009839Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaGEnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012199Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012285Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012355Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaGEnvironmentalOpen in IMG/M
3300012356Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300014169Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaGEnvironmentalOpen in IMG/M
3300014489Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaGEnvironmentalOpen in IMG/M
3300014654Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin06_10_metaGEnvironmentalOpen in IMG/M
3300015359Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017821Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_2EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300017939Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_10_MGEnvironmentalOpen in IMG/M
3300017959Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MGEnvironmentalOpen in IMG/M
3300017973Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MGEnvironmentalOpen in IMG/M
3300017974Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MGEnvironmentalOpen in IMG/M
3300017994Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_2EnvironmentalOpen in IMG/M
3300017995Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300018007Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5EnvironmentalOpen in IMG/M
3300018043Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10EnvironmentalOpen in IMG/M
3300018046Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_10EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018085Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MGEnvironmentalOpen in IMG/M
3300018086Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_10_MGEnvironmentalOpen in IMG/M
3300018431Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104EnvironmentalOpen in IMG/M
3300020579Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-MEnvironmentalOpen in IMG/M
3300020581Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-MEnvironmentalOpen in IMG/M
3300020583Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-MEnvironmentalOpen in IMG/M
3300021171Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-MEnvironmentalOpen in IMG/M
3300021180Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-OEnvironmentalOpen in IMG/M
3300021404Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-OEnvironmentalOpen in IMG/M
3300021405Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-OEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021559Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-MEnvironmentalOpen in IMG/M
3300021560Tropical forest soil microbial communities from Panama - MetaG Plot_4EnvironmentalOpen in IMG/M
3300022731Soil microbial communities from Bohemian Forest, Czech Republic ? CSU4EnvironmentalOpen in IMG/M
3300026317Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121 (SPAdes)EnvironmentalOpen in IMG/M
3300026322Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 (SPAdes)EnvironmentalOpen in IMG/M
3300026329Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300027080Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaG HF009 (SPAdes)EnvironmentalOpen in IMG/M
3300027568Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027795Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP14_OM3 (SPAdes)EnvironmentalOpen in IMG/M
3300027853Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1 (SPAdes)EnvironmentalOpen in IMG/M
3300027905Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)EnvironmentalOpen in IMG/M
3300028789Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3EnvironmentalOpen in IMG/M
3300028801Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_3EnvironmentalOpen in IMG/M
3300030617II_Palsa_N2 coassemblyEnvironmentalOpen in IMG/M
3300031028Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - I_Palsa_E3_2EnvironmentalOpen in IMG/M
3300031544Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031564Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031753Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515EnvironmentalOpen in IMG/M
3300031754Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031792Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23EnvironmentalOpen in IMG/M
3300031798Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031946Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032039Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f21EnvironmentalOpen in IMG/M
3300032044Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20EnvironmentalOpen in IMG/M
3300032059Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27EnvironmentalOpen in IMG/M
3300032060Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18EnvironmentalOpen in IMG/M
3300032064Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f17EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032180Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032892Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5EnvironmentalOpen in IMG/M
3300032895Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.3EnvironmentalOpen in IMG/M
3300032955Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5EnvironmentalOpen in IMG/M
3300033158Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033808Tropical peat soil microbial communities from peatlands in Loreto, Peru - MAQ_100_20EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI26339J46600_1012031113300003218Bog Forest SoilVNAAIIAALRAHAAGLYPEEAGTELLISHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAAL
Ga0062387_10010774713300004091Bog Forest SoilVTAATAAALRACAAGYYPAEAGAELLIRHDCFLRRRDFAGFVHAGTSITDGVTPMAQIDWDAAISALHAGQLPAS
Ga0066672_1004114013300005167SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDA
Ga0066690_1048241923300005177SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDW
Ga0070703_1004532213300005406Corn, Switchgrass And Miscanthus RhizosphereVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDDTTLMAWIDWDAALTALHD
Ga0070710_1049551323300005437Corn, Switchgrass And Miscanthus RhizosphereVSAALTGALRARAAGLFPDEAGTELLIRHGGILHREDFAGFVHT
Ga0070710_1061296213300005437Corn, Switchgrass And Miscanthus RhizosphereVTATLPAALRACAAGLYPDEASVELLISHGGFLHRRDFGAFVHAGTSITDGITQMAHVDWDAAITALHAGQLPVSGGERRILQLTA
Ga0070708_10217487713300005445Corn, Switchgrass And Miscanthus RhizosphereVTAAIIAALRAHAAGLYPEEAGTELLIGHGGILPRDDFARFVHTGTSIS
Ga0070698_10020795223300005471Corn, Switchgrass And Miscanthus RhizosphereVTAALTAALRACAAGFYPSEAGTGLLISHGGFLDRPDFGAFIHAGTSISDGITEMAEIDWHAVISALQDGHLPVSGGEQRLLRLAAS
Ga0070698_10027804513300005471Corn, Switchgrass And Miscanthus RhizosphereVTDTITAALRAHAAGLHPDQAGTELLIAHGRILHRDDFAGFVHTGTSIGDGTTLMAWIDWDAALSAL
Ga0070717_1019222913300006028Corn, Switchgrass And Miscanthus RhizosphereVTAALSAALRASAAGLYPDEAGNELLISHGGFLSRSDFTGFADTFTSISDGTTPM
Ga0075024_10069352423300006047WatershedsAAGLYPEEAGTDLLIGHGGILPRDDFADFVHTGTSISDGTTLMAWIDWDAALSALHDGQIPLSGGEQRILQHPSLRGT*
Ga0075015_10012750113300006102WatershedsVTAALTAALRACAAGFYPSEAGTGLLISHGGFLGRADFGAFIHAGTSITDGITEMAEISWQDVITALHQGHLPVSGGEQRILRIAASIAGGTP
Ga0066653_1039970023300006791SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALSALHHGQIPLCGGEQRI
Ga0075425_10062674123300006854Populus RhizosphereVTAAIITALRAHAAGLYPEEAGTELLIRHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAALS
Ga0099795_1050877723300007788Vadose Zone SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDRDAALTALHDGQIPLCSGEQRILTLAASIA
Ga0099829_1107477923300009038Vadose Zone SoilVNTPTIAALRPHAAGLYPGEAGTELLIRHGSILPRDDFARFVHTGTSISDGTTLMAWIDRDAALSALHDGQI
Ga0116221_105415233300009523Peatlands SoilVTAAIIAALRAHAAGLHPDEAGTELLIGHGGILHRDDFARFVHTGT
Ga0116220_1011848923300009525Peatlands SoilVTDAISAALRAHAAGIYPDEAGTELLISHGGFLRRHDFAAFVHAGTSISDSITPMAWIDCDAAITA*
Ga0116133_103554413300009623PeatlandVTATLPAALRACAAGYYPAEAGTDLLIRHGCFLHRRDFAGFIHAGTSISDGITPMAE
Ga0116224_1058782013300009683Peatlands SoilVTDATTAALRACAAGLYPGEAGAGLLISHGGFLHRSDFTSFVDTFTSFSDGVTPMAQINWDAVHSA
Ga0116216_1063511413300009698Peatlands SoilVTDAIIAALRAYVAGLHADEAGTELLISHGGFLHRPDFRRFVATFASVSDGTPMGQIDWQSVHTAWRDGQLPV
Ga0116223_1074900613300009839Peatlands SoilVTDATTAALRACAAGLYPGEAGAGLLISHGGFLHRSDFTSFVDTFTSFSDGVTPMAQINWDAVHSALHDGQLPLCGGERRILKLA
Ga0134125_1045737623300010371Terrestrial SoilVTAAVIAALRARAAGLYPEEAGTEMLIRHGGILHRDDFACFVHAGTSISDGTTLMAW
Ga0137389_1024359023300012096Vadose Zone SoilVTDAIITALRTCAAGLHPDEAGVELLISHGGFLGRRDFAGFVHTGTSFSDGETLMAQIDWQAAISALHDGQLPVSG
Ga0137383_1137062123300012199Vadose Zone SoilVTAAIIAALRAHAAGLYPEEAGTELLICHGGILPRDDFASFVHTGTSISDGATLMAWIDWDAALTALHDGQIPVCGGEQR
Ga0137363_1071824423300012202Vadose Zone SoilVNTAIIAALRAHAAGLYPEEAGTELLIRHGGILPRDDFAGFVHTGTSISDGATLMAWIDWDAALTALHDGQ
Ga0137370_1101071413300012285Vadose Zone SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGSILARDDFAGFGHTSTSISDGTT
Ga0137369_1100737513300012355Vadose Zone SoilVTAALSAALRASAAGLYPDEAGNELLISHGGFLRRHDFAAFVHAGTSISDGTT
Ga0137371_1140519313300012356Vadose Zone SoilVNTAITAAPRAHAAGLHPEEAGTDLLTGHGGILPRDDFAGYLHTGTSISDGTTLMAWIDWDAALSALHDGQIPVSGGEQSILQLAASIADGT
Ga0137360_1114005023300012361Vadose Zone SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDWDAALTALHDGQIPVCSGEQRILQLA
Ga0181531_1051012313300014169BogVTDATAAALRACAAGLYPDEAAVELLISHGGFLHRSDFTSFVDTFTSLSDG
Ga0182018_1067525923300014489PalsaVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDVFAGFVHTGTSISDG
Ga0181525_1032994813300014654BogVNDAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDDTTLMAWIDW
Ga0134085_1055990123300015359Grasslands SoilVNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSI
Ga0134074_140551623300017657Grasslands SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALTALHDGQIPLCSGEQRILTLAA
Ga0187812_104382223300017821Freshwater SedimentVNAAIIAALRAHAAGLYPEEAGTELLIGHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDAALS
Ga0187802_1046153313300017822Freshwater SedimentVTGALIAALRAHAAGLYPDEAGTELLIRHGSIVHRHDFVGFVHTGTSISDGTTLMAWIDWDAALSA
Ga0187775_1000282843300017939Tropical PeatlandVTGAIIAALRAHAAGLHPDEAGTELLIGHGGFLPRDDFTRYLHTGTSSRDGTTLMAWIDWDAALSALHGGQIPLCGGEQRILRLA
Ga0187779_1117760813300017959Tropical PeatlandVTSAITTALRASAAGLYHDEAGTELLISHGGILHRPDFTGFVRTGTSISDGTT
Ga0187780_1051179413300017973Tropical PeatlandVTDAIIAALRAHAAGLHPDQASTELLIRHGGIVHRDDLAGFIHTGTSISDGTTLMA
Ga0187777_1046693023300017974Tropical PeatlandVTGAIIAALRAHAAGLHPEEAGTELLIRHGGILHRDDFAGFVHTGTSISDGTTLMAWVDWDAA
Ga0187822_1016367233300017994Freshwater SedimentVSAALSAALRAHAAGLYPDEAGTDLLIRHGGILAREDFSGFVHTGTSISDGTTLLAWID
Ga0187816_1005420613300017995Freshwater SedimentVTAALSVALRASAAGLYPDEAGNELLISHGGFLYRSDFTGFVDTFTSISDGTTPMAQINWDAAISAPHNGQLPVCSGERRI
Ga0187804_1017552713300018006Freshwater SedimentVSAALSAALRAHAAGLYPDEAGTDLLIRHGGILAREDFSGFVHTGTSISDGTTL
Ga0187805_1027437513300018007Freshwater SedimentVNAALRAHAAGLYPDEAGTDLLIGHGGILHREDFAGFVHTGTSISDGTTLLAWID
Ga0187805_1047617023300018007Freshwater SedimentVTGALIAALRAHAAGLYPDEAGTELLIRHGSIVHRHDFVGFVHTGTSISDGTTL
Ga0187887_1036357823300018043PeatlandVTDATAAALRACAAGLYPDEAAVELLISHGGFLHRSDFTSFVDTFTSLSDGVTPMA
Ga0187851_1042253813300018046PeatlandVTAALPAALRACAAGYYPAEAGTDLLISHGYFLHRPDFAGFIHTGTSISDGITPMAEVDWHAAISALHAGQ
Ga0187773_1050678923300018064Tropical PeatlandVTGTAITALRACAAGLYPSEAGTELLISHGGFLRRSDFTSFVDTFTSSSDGATPMAQINWDALHRALHDGQ
Ga0187772_1093728813300018085Tropical PeatlandVNAAIIAALRAHAAGLYPEEAGTELLIRHGGILPRDDFARFVHAGTSISDGTTLMAWIDWDAALSA
Ga0187769_1053789023300018086Tropical PeatlandVTGPVVAALRAHAAGLYPDEAGTELLIGHGGILHRDDFARFIHTGTSIS
Ga0066655_1031238213300018431Grasslands SoilVNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSISDGAT
Ga0210407_1117960023300020579SoilVTAVTAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQIDWDAAISALH
Ga0210399_1161333623300020581SoilVTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQI
Ga0210401_1141737523300020583SoilMTGAMTAALRACAAGIHPGEAGTELLIRHGAILHRPDFTGFVHTGTSISDGTTLMAWID
Ga0210405_1035569723300021171SoilVSAAIIAALRAHAAGLHPEEAGTDLLIGHGGILPRDDFARFVHTGTSISEGTTLMAWIDWDAALTALHDGQIPVCSG
Ga0210396_1017411323300021180SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGAILHRDDFAGFVHAGTSISDGTTLMAWIDW
Ga0210389_1067535523300021404SoilVTAVTAAALRACAAGYYPAEAGTELLIQHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSA
Ga0210387_1047810213300021405SoilVTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHTGTSSTDGETNMAQIDWDAAISALHAG
Ga0187846_1004966923300021476BiofilmVNAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFASFVHAGTSISDGTTLMAWIDWDAALALH
Ga0210409_1046556813300021559SoilVTAATTAALRACAAGLYPAEAGVELLISHDCFLHRHDFAGFVHAGTSITDAT
Ga0126371_1133256623300021560Tropical Forest SoilVTAALTAALRACAAGLYPDEAGTELLISHGGFLHRPDFSRFAVTFASITDGTPMARIDWQSVHSA
Ga0224563_101004023300022731SoilVTAAITAALRARAAGLHPDEAGTELLIGHGGILPRDDFASFVHTGTSISDGTTLMAWIDWDA
Ga0209154_104483813300026317SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGSILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALT
Ga0209687_101871213300026322SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFAGFVHTGTSISDGTTLMAWIDWDAALSALHH
Ga0209375_105925013300026329SoilVNAAIIAALRAHAAGLYPEEAGTELLIRHGSILHRDDFARFVHTGTSISDGATLMAWIDWDAALSALHDGQIPVCGGEQRI
Ga0209648_1056219413300026551Grasslands SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFIHTGVSISDGTTLMAWIDWDAALSALHDGQIPLCGGEQRILTLA
Ga0208237_104224923300027080Forest SoilVNAAITGALRAHAAGLHPEEVGTELLIGHGGILPRDDFARFVHTGTSISEGTTLMAWIDWDAALTA
Ga0208042_105310723300027568Peatlands SoilVTDAISAALRAHAAGIYPDEAGTELLISHGGFLRRHDFAAFVHTGTS
Ga0209139_1032254823300027795Bog Forest SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGAILHRDDFAGFVHAGTSISDGTTLMAWID
Ga0209274_1074218913300027853SoilVTTPVTAALRARAAGLYPDEASVELLISHGGFLHRRDFAGFVHTGTSISDGTTLMAR
Ga0209415_1020935313300027905Peatlands SoilVTAAIIAALRAHAAGLHPDEAGTELLIGHGGILHRDDFARFIHTGTSISDGTTLMAWIDWDAALSAL
Ga0209415_1047643223300027905Peatlands SoilVTAAIIAALRAHAAGLYPEEAGTELLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSAL
Ga0302232_1046142813300028789PalsaVTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSD
Ga0302226_1046905523300028801PalsaVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDDTTLMAWIDWHAALTALHDGQIPVCSGEQRISS
Ga0311356_1075580523300030617PalsaVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILHRDDFASFVHTGTSISDD
Ga0311356_1134583223300030617PalsaVTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSDGVTPMAQIN
Ga0302180_1024813823300031028PalsaVTDATAAALRACAAGLYPDEAAVELLIGHGGFLHRSDFTSFVDTFTSLSDGVTPM
Ga0318534_1055087113300031544SoilVTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDGDAALTALHDG
Ga0318541_1075614513300031545SoilVTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTL
Ga0318573_1043149923300031564SoilVSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTSISDGTTLMAWIDWDAALRALHDGQLPGRGGE
Ga0318501_1054205913300031736SoilVTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWI
Ga0307477_1031414523300031753Hardwood Forest SoilVTAATAAALRACAAGYYPAEAGTELLIRHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSALHAGQLPASGAHPV
Ga0307475_1050684423300031754Hardwood Forest SoilVTAVTAAALRACAAGYYPAEAGTELLIQHDCFLRRRDFAGFVHAGTSITDGITEMAQIDWDAATSALHAGPATNCRAPPPSRPAR
Ga0307475_1060506613300031754Hardwood Forest SoilVNAAIIAALRAHAAGLHPEEAGTELLIGHGGILPRDDFARFVHTGTSISDGTTLMAWIDWDTALTALHDGQIPVCSGEQRILQL
Ga0318546_1111783313300031771SoilVTAAITAALRAHAAGLYPGEAGTELLIRHGGILHRRDFAAFVHTGTSISDGTTLMAWIGWDAVLSALHDGQLPACDLLTELTMSG
Ga0318529_1059937013300031792SoilVSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTSISDGTTLMAWIDWDAALRALHDGQLPGRGGEQRILQ
Ga0318523_1016865523300031798SoilVSATLTAALRAHAAGLHPDEAGTGLLISHGAILHRDDFASFVHTSTS
Ga0318517_1003127633300031835SoilVTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALH
Ga0310912_1042055223300031941SoilVTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALHD
Ga0310916_1118626813300031942SoilVTEAITAALRAHAAGLYPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDGDAALTALHDGQIPPCGGEQRILQ
Ga0310910_1025304323300031946SoilVTEAITAALRAHAAGLHPEEAGTELLIGHGGIVPRDDFASFIHTGTSISDGTTLMAWIDWDAALTALHDGQIPLCGGEQRIL
Ga0307479_1156048913300031962Hardwood Forest SoilMTDAITAALRAAAAGILPDEAGTGLLIARGCFLHRDDFARFTRTAASITDGTLL
Ga0318559_1050820713300032039SoilVTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDWDAALSALHHGQIPLSGGEQRILQL
Ga0318559_1059551313300032039SoilVTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDR
Ga0318558_1049954813300032044SoilVTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTL
Ga0318533_1045581623300032059SoilVTAAIIAALRAHAAGLHPEEAGTGLLIGHGGILHRDDFARFVHTGTSISDGTTLMAWIDW
Ga0318505_1004881313300032060SoilVTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDRDAALSALHH
Ga0318510_1019553123300032064SoilVTEAIIAALRARAAGLYPDEGGTELLIGHGGILHRDDFAAFIRTGTSSSDGSTLMAWIDRDAALSALHHGHLPVSGGERHIIQLAAS
Ga0311301_1079254213300032160Peatlands SoilVTAAIAAALRARAAGLYPDEAGTELLISHGGFLLRRDFAGFMHTGTSISDGITAMAEINWDAVISALHAGQLPLSG
Ga0307471_10394468923300032180Hardwood Forest SoilVNAALIAALRAHAAGLYPDEAGTGLLISHGAILHRDDFTSYVHTGTSI
Ga0307472_10010927813300032205Hardwood Forest SoilVSTALPGALRAHAAGLYPHEAGTELLIRHGGILLREDFAGFVHTGTSISDGTTLLA
Ga0335085_1024854923300032770SoilVTAAIIAALRAHAAGLHPEEAGAELLIGHGSILPRGDFAGFVHTGTSISDGTTLMAWIDWDAALSALHDGQIPLSDLLTELTMSR
Ga0335081_1037069423300032892SoilMSAALTGALRAHAAGLYPDEAGTELLIRHGGILLREDFAGFVHTGTSISDGTTLLAWIDWDAAL
Ga0335081_1199527323300032892SoilVSAALTAALRAHAAGLYPGEADTELLISHGAILHRDDFTPFVHTGTSISDGTTMLAWI
Ga0335074_1014965333300032895SoilVTDATAAALRARAAGLYPDEAAVELPISHGGFLHRSDFTSFVDTFTSLSTGTCNS
Ga0335076_1015847233300032955SoilVSAALTGALRAHAAGLYPDEAGTELLIRHGGILLRDDFSGFVHTGTSISDGTTLMAWIDWDAALSALHH
Ga0335077_1160163823300033158SoilMSAALTGALRARAAGLYPDQAGTDLLIGHGGILLREDFAGFVHTGTSISDGTTLLAWIDW
Ga0326726_1242472313300033433Peat SoilVTAAITAALRAHAAGLYPGEAGTELLISHGGILHRRDFAAFVHTGTSISDGTTL
Ga0314867_014472_1_2013300033808PeatlandVTSAITTALRASAAGLYHDEAGTELLISHGGILHRPDFTGFVRTGTSISDGTTLMAWIDWDAATTAL

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.