Metagenome / Metatranscriptome Family F085318

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085318
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	125 residues
Representative Sequence	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA
Number of Associated Samples	95
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.07 %
% of genes near scaffold ends (potentially truncated)	33.33 %
% of genes from short scaffolds (< 2000 bps)	89.19 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.297 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (22.523 % of family members)
Environment Ontology (ENVO)	Unclassified (39.640 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Subsurface (non-saline) (46.847 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 64.06% β-sheet: 0.00% Coil/Unstructured: 35.94%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF10027	DUF2269	18.92
PF08031	BBE	8.11
PF00067	p450	4.50
PF13302	Acetyltransf_3	3.60
PF00563	EAL	0.90
PF09754	PAC2	0.90
PF08281	Sigma70_r4_2	0.90
PF00578	AhpC-TSA	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG0277	FAD/FMN-containing lactate dehydrogenase/glycolate oxidase	Energy production and conversion [C]	8.11
COG2124	Cytochrome P450	Defense mechanisms [V]	4.50
COG2200	EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)	Signal transduction mechanisms [T]	0.90
COG3434	c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domains	Signal transduction mechanisms [T]	0.90
COG4943	Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domains	Signal transduction mechanisms [T]	0.90
COG5001	Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domain	Signal transduction mechanisms [T]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.30 %
Unclassified	root	N/A	2.70 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	89.19 %
Unclassified	root	N/A	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	88.29 %
Unclassified	root	N/A	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	84.68 %
Unclassified	root	N/A	2.70 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	81.98 %
Unclassified	root	N/A	2.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	81.98 %
Unclassified	root	N/A	2.70 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.80 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.90 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003213\|JGI26313J46564_101056	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	896	Open in IMG/M
3300005331\|Ga0070670_100635986	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	956	Open in IMG/M
3300005406\|Ga0070703_10011428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2507	Open in IMG/M
3300005518\|Ga0070699_100221904	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300005577\|Ga0068857_100690224	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300005719\|Ga0068861_101711863	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	622	Open in IMG/M
3300005841\|Ga0068863_100010990	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	8779	Open in IMG/M
3300006844\|Ga0075428_100277391	All Organisms → cellular organisms → Bacteria	1804	Open in IMG/M
3300006847\|Ga0075431_101257319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	702	Open in IMG/M
3300006865\|Ga0073934_10056931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3314	Open in IMG/M
3300009011\|Ga0105251_10085725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1451	Open in IMG/M
3300009081\|Ga0105098_10128529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1119	Open in IMG/M
3300009146\|Ga0105091_10142382	Not Available	1120	Open in IMG/M
3300009147\|Ga0114129_10142802	All Organisms → cellular organisms → Bacteria	3280	Open in IMG/M
3300009157\|Ga0105092_10125718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1417	Open in IMG/M
3300009168\|Ga0105104_10281831	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	911	Open in IMG/M
3300009809\|Ga0105089_1047033	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	660	Open in IMG/M
3300009810\|Ga0105088_1065564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	632	Open in IMG/M
3300009811\|Ga0105084_1063322	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	666	Open in IMG/M
3300009814\|Ga0105082_1011426	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1263	Open in IMG/M
3300009816\|Ga0105076_1015872	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1288	Open in IMG/M
3300009817\|Ga0105062_1009695	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1500	Open in IMG/M
3300009818\|Ga0105072_1033450	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	957	Open in IMG/M
3300009819\|Ga0105087_1041138	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	732	Open in IMG/M
3300009836\|Ga0105068_1065540	All Organisms → cellular organisms → Bacteria → Terrabacteria group	673	Open in IMG/M
3300010166\|Ga0126306_11183329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	628	Open in IMG/M
3300011429\|Ga0137455_1171808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300011432\|Ga0137428_1241640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	533	Open in IMG/M
3300012159\|Ga0137344_1083925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M
3300012355\|Ga0137369_10812523	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300014325\|Ga0163163_10101491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2899	Open in IMG/M
3300015258\|Ga0180093_1043937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	994	Open in IMG/M
3300015374\|Ga0132255_101242860	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1123	Open in IMG/M
3300017997\|Ga0184610_1185021	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	693	Open in IMG/M
3300017997\|Ga0184610_1246488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	594	Open in IMG/M
3300018028\|Ga0184608_10186750	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	905	Open in IMG/M
3300018031\|Ga0184634_10025736	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2282	Open in IMG/M
3300018052\|Ga0184638_1143531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	865	Open in IMG/M
3300018052\|Ga0184638_1237027	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	633	Open in IMG/M
3300018052\|Ga0184638_1311650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300018053\|Ga0184626_10078864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1390	Open in IMG/M
3300018053\|Ga0184626_10097440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1245	Open in IMG/M
3300018054\|Ga0184621_10003784	All Organisms → cellular organisms → Bacteria	4007	Open in IMG/M
3300018056\|Ga0184623_10187404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	953	Open in IMG/M
3300018075\|Ga0184632_10197518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	886	Open in IMG/M
3300018076\|Ga0184609_10542838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	526	Open in IMG/M
3300018077\|Ga0184633_10625309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	505	Open in IMG/M
3300018078\|Ga0184612_10199199	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1040	Open in IMG/M
3300018079\|Ga0184627_10026942	All Organisms → cellular organisms → Bacteria	2872	Open in IMG/M
3300018081\|Ga0184625_10187593	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300018465\|Ga0190269_10812648	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	675	Open in IMG/M
3300018469\|Ga0190270_10727564	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300018469\|Ga0190270_11776129	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	672	Open in IMG/M
3300018469\|Ga0190270_12201646	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	612	Open in IMG/M
3300018469\|Ga0190270_12590639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	569	Open in IMG/M
3300018476\|Ga0190274_11586856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	747	Open in IMG/M
3300018481\|Ga0190271_11543363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300019233\|Ga0184645_1247124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	837	Open in IMG/M
3300019233\|Ga0184645_1311067	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300019249\|Ga0184648_1077881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300019249\|Ga0184648_1402796	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	824	Open in IMG/M
3300019259\|Ga0184646_1089251	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	811	Open in IMG/M
3300019377\|Ga0190264_10335202	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	939	Open in IMG/M
3300019767\|Ga0190267_11590572	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	510	Open in IMG/M
3300019884\|Ga0193741_1123355	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300020003\|Ga0193739_1032680	All Organisms → cellular organisms → Bacteria	1350	Open in IMG/M
3300020003\|Ga0193739_1155910	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300020005\|Ga0193697_1020188	All Organisms → cellular organisms → Bacteria → Proteobacteria	1650	Open in IMG/M
3300020020\|Ga0193738_1012791	All Organisms → cellular organisms → Bacteria	2714	Open in IMG/M
3300020065\|Ga0180113_1420492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	582	Open in IMG/M
3300021972\|Ga0193737_1004013	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300022195\|Ga0222625_1069072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	528	Open in IMG/M
3300022195\|Ga0222625_1548888	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300022534\|Ga0224452_1050987	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1230	Open in IMG/M
3300022756\|Ga0222622_10915597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300025885\|Ga0207653_10129051	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	916	Open in IMG/M
3300025908\|Ga0207643_10000127	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	52174	Open in IMG/M
3300025925\|Ga0207650_10059472	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2849	Open in IMG/M
3300026118\|Ga0207675_101156918	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	794	Open in IMG/M
3300026535\|Ga0256867_10074982	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1331	Open in IMG/M
3300027056\|Ga0209879_1004267	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300027277\|Ga0209846_1017332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1191	Open in IMG/M
3300027324\|Ga0209845_1009034	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1694	Open in IMG/M
3300027533\|Ga0208185_1124629	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	600	Open in IMG/M
3300027577\|Ga0209874_1025356	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1652	Open in IMG/M
3300027577\|Ga0209874_1041557	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1222	Open in IMG/M
3300027675\|Ga0209077_1184146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300027743\|Ga0209593_10096902	Not Available	1088	Open in IMG/M
3300027909\|Ga0209382_10820101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	988	Open in IMG/M
3300027909\|Ga0209382_10946789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	902	Open in IMG/M
3300027956\|Ga0209820_1136194	Not Available	676	Open in IMG/M
3300028812\|Ga0247825_10847068	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300028814\|Ga0307302_10496300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	606	Open in IMG/M
3300028824\|Ga0307310_10279028	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	809	Open in IMG/M
3300028828\|Ga0307312_10367529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	942	Open in IMG/M
3300030336\|Ga0247826_10243825	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1257	Open in IMG/M
3300030336\|Ga0247826_10886171	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	703	Open in IMG/M
3300030336\|Ga0247826_11807985	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	500	Open in IMG/M
3300030606\|Ga0299906_10261520	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1358	Open in IMG/M
3300030829\|Ga0308203_1034269	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300030902\|Ga0308202_1026889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	945	Open in IMG/M
3300030903\|Ga0308206_1035984	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	924	Open in IMG/M
3300030903\|Ga0308206_1186781	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	518	Open in IMG/M
3300031092\|Ga0308204_10065179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	925	Open in IMG/M
3300031562\|Ga0310886_10519956	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	721	Open in IMG/M
3300031940\|Ga0310901_10092189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1079	Open in IMG/M
3300033417\|Ga0214471_10329332	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1239	Open in IMG/M
3300033550\|Ga0247829_10829242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	770	Open in IMG/M
3300034149\|Ga0364929_0172367	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	708	Open in IMG/M
3300034176\|Ga0364931_0110857	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	872	Open in IMG/M
3300034417\|Ga0364941_044402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	981	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	86.49%
Host-Associated	Host-Associated	13.51%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	50.45%
Aquatic	Environmental → Aquatic	36.04%
Plants	Host-Associated → Plants	13.51%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.75%
Sediment	Environmental → Aquatic → Sediment	21.62%
Freshwater	Environmental → Aquatic → Freshwater	13.51%
Rhizosphere	Host-Associated → Plants → Rhizosphere	7.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	5.41%
Floodplain	Environmental → Terrestrial → Floodplain	2.70%
Thermal Springs	Environmental → Aquatic → Thermal Springs	0.90%
Roots	Host-Associated → Plants → Roots	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	32.43%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	21.62%
Sediment	Environmental → Aquatic → Freshwater → Sediment	13.51%
Sand	Environmental → Terrestrial → Soil → Sand	12.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	5.41%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.50%
Loam	Environmental → Terrestrial → Soil → Loam	2.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.70%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.80%
Sediment	Environmental → Aquatic → Thermal Springs → Sediment	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	0.90%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	24.32%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	21.62%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	13.51%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	12.61%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	6.31%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	5.41%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.70%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.70%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.80%
Unclassified	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified	0.90%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.90%
Uranium Contaminated	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated	0.90%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	0.90%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	22.52%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	15.32%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	12.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	7.21%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	6.31%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	6.31%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.50%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	4.50%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.70%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.70%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.70%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.80%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.80%
Hot Spring Sediment	Environmental → Aquatic → Thermal Springs → Sediment → Unclassified → Hot Spring Sediment	0.90%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.90%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.90%
Soil	Environmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil	0.90%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	0.90%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.90%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Switchgrass Rhizosphere	0.90%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003213	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-G10K4-12	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005577	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006865	Hot spring sediment bacterial and archeal communities from British Columbia, Canada, to study Microbial Dark Matter (Phase II) - Larsen N4 metaG	Environmental	Open in IMG/M
3300009011	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG	Host-Associated	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009146	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009809	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_30_40	Environmental	Open in IMG/M
3300009810	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009814	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60	Environmental	Open in IMG/M
3300009816	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_0_10	Environmental	Open in IMG/M
3300009817	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_10_20	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300009819	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_40_50	Environmental	Open in IMG/M
3300009836	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_10_20	Environmental	Open in IMG/M
3300010166	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot27	Environmental	Open in IMG/M
3300011429	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT600_2	Environmental	Open in IMG/M
3300011432	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT718_2	Environmental	Open in IMG/M
3300012159	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT500_2	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300014325	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S6-5 metaG	Host-Associated	Open in IMG/M
3300015258	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaG ERMLIBT45_16_1Da	Environmental	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018056	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_coex	Environmental	Open in IMG/M
3300018079	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018481	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 T	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019249	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_32 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019377	Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300019884	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2s2	Environmental	Open in IMG/M
3300020003	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a2	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020020	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2a1	Environmental	Open in IMG/M
3300020065	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT499_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021972	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L2m2	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025908	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026118	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026535	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (HiSeq)	Environmental	Open in IMG/M
3300027056	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027277	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027324	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S2_50_60 (SPAdes)	Environmental	Open in IMG/M
3300027533	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMLT700 (SPAdes)	Environmental	Open in IMG/M
3300027577	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_20_30 (SPAdes)	Environmental	Open in IMG/M
3300027675	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027743	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300027956	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300028812	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300030606	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT145D125	Environmental	Open in IMG/M
3300030829	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_357 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030902	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030903	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_369 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031940	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D2	Environmental	Open in IMG/M
3300033417	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT142D155	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034149	Sediment microbial communities from East River floodplain, Colorado, United States - 20_j17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M
3300034417	Sediment microbial communities from East River floodplain, Colorado, United States - 17_s17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26313J46564_1010561	3300003213	Soil	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIADA*
Ga0070670_1006359862	3300005331	Switchgrass Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0070703_100114282	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	MGMTGMMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0070699_1002219041	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSG
Ga0068857_1006902241	3300005577	Corn Rhizosphere	GTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0068861_1017118631	3300005719	Switchgrass Rhizosphere	MGMTGTMRGYSSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0068863_1000109905	3300005841	Switchgrass Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAERDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0075428_1002773912	3300006844	Populus Rhizosphere	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTDSSSTGSGATA*
Ga0075431_1012573191	3300006847	Populus Rhizosphere	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGKSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSNTDPGVTA*
Ga0073934_100569313	3300006865	Hot Spring Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARWKRDNGTEWGTGPSSTGSGATTA*
Ga0105251_100857252	3300009011	Switchgrass Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRIIDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIADA*
Ga0105098_101285292	3300009081	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSTTDSGATA*
Ga0105091_101423821	3300009146	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSTSTDPGATA*
Ga0114129_101428025	3300009147	Populus Rhizosphere	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNENGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGSEWSTDSSSTGSGATA*
Ga0105092_101257182	3300009157	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENEKANGNDKGKSHKGRWMLILLALGGGAFAIVQRMRDSGTEWSTGSTSTDPSATT*
Ga0105104_102818311	3300009168	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDWVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSTSTDPGATA*
Ga0105089_10470331	3300009809	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLVLLALGGGTFAIV
Ga0105088_10655641	3300009810	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTGSG
Ga0105084_10633222	3300009811	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA*
Ga0105082_10114261	3300009814	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISESGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA*
Ga0105076_10158722	3300009816	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTGSGATA*
Ga0105062_10096952	3300009817	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIVRRMRENGTEWSTGSSSTGSGATA*
Ga0105072_10334501	3300009818	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTDSGATA*
Ga0105087_10411381	3300009819	Groundwater Sand	REVTMGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA*
Ga0105068_10655401	3300009836	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAI
Ga0126306_111833291	3300010166	Serpentine Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSGTTDSGASA*
Ga0137455_11718081	3300011429	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWILILLALGGGAFAIVRRKRDNGTEWGTGPSSTGSGATTA*
Ga0137428_12416401	3300011432	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERMPQNEKANGNGNGRSHKGRWMLILLALGGGAFAIVRRKRDSGTEWSTGSSSTGSGATA*
Ga0137344_10839251	3300012159	Soil	MGMTGTMKGYGSAARFKAEAAGHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDSGTEWSTGSSSTGSGATA*
Ga0137369_108125231	3300012355	Vadose Zone Soil	MSMTETMRGYGSAARFRAGSAGHRIKDRMLERRLDRSSQEAERLRLENQVLRDEVAESRTEHHRILDLLEERISEHPTENGHANENGRSHKGRWMLVLVALGGGAFAIARRMRENGTDWGTGSRATA*
Ga0163163_101014912	3300014325	Switchgrass Rhizosphere	MTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0180093_10439371	3300015258	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEDRISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDSGTEWSTCSSSTGSSSTGSGATA*
Ga0132255_1012428602	3300015374	Arabidopsis Rhizosphere	MTGMMKGYGSAARFKAEAAGHRMKDRMLEKRLDPSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA*
Ga0184610_11850211	3300017997	Groundwater Sediment	TMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENAKENGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTRSNSTGSGATA
Ga0184610_12464881	3300017997	Groundwater Sediment	GYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRKRDNGTEWGTGPSSTGSGATA
Ga0184608_101867501	3300018028	Groundwater Sediment	EAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHRGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA
Ga0184634_100257362	3300018031	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGEASGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTGSSSTGSGATA
Ga0184638_11435312	3300018052	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184638_12370272	3300018052	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGAT
Ga0184638_13116501	3300018052	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATPA
Ga0184626_100788642	3300018053	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGTSSTGSGATA
Ga0184626_100974402	3300018053	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTRSSSTGSGATA
Ga0184621_100037842	3300018054	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA
Ga0184623_101874042	3300018056	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRAAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGKANGNGNGRSHKGRWMLILLALGSGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184632_101975181	3300018075	Groundwater Sediment	RRGDSSTAAMGNHRGSADPGEVTMGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATPA
Ga0184609_105428382	3300018076	Groundwater Sediment	KDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEEGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184633_106253091	3300018077	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184612_101991992	3300018078	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184627_100269422	3300018079	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNSNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184625_101875932	3300018081	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATPA
Ga0190269_108126482	3300018465	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEESRTEHHRILDLLENRMAEQDHENGHGRFHKGRWMLFLLALGGGAYALMRRMRDNGTEWGTGSGATA
Ga0190270_107275642	3300018469	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSGTTDSGATA
Ga0190270_117761292	3300018469	Soil	MSMTGAMKDYGSTARVKAGAAGHRMKDRMLEKRLDHSSQEAERLRLENQLLRNEVEGSRTEHRRILDLLEERTEHHDEKARSHKGRWLVFLLALGGAVYALTRRMREDSSTWETGSNTTA
Ga0190270_122016462	3300018469	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSTTDPGATA
Ga0190270_125906392	3300018469	Soil	AARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA
Ga0190274_115868561	3300018476	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA
Ga0190271_115433631	3300018481	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGKSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSGTTDSGATA
Ga0184645_12471241	3300019233	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEASGNGNGRSHKGRWMLILLALGGGAFAIVRRKRDNGTEW
Ga0184645_13110671	3300019233	Groundwater Sediment	PGEVTMGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0184648_10778812	3300019249	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAAGHRMKDRMLEKRLDRSSEVAERLRLENQLLRDEVEESRTEHHRILDLLEERMADQDHENGHGRSHKGRWMVFLLALGGGAYALMRRMRENGTEWGTGSGATA
Ga0184648_14027961	3300019249	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWGTGTTSTGSGATA
Ga0184646_10892511	3300019259	Groundwater Sediment	PGEVTMGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHRGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA
Ga0190264_103352021	3300019377	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGRSHKGRWMLILLALGGGAFAIVRR
Ga0190267_115905721	3300019767	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSTSTDPGATA
Ga0193741_11233551	3300019884	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTGSGATA
Ga0193739_10326802	3300020003	Soil	MGMTGTMRGYGSAARFKAEAAGHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNDNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTTGSGATA
Ga0193739_11559101	3300020003	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTASSSTGSGATA
Ga0193697_10201883	3300020005	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSSSTGSGATA
Ga0193738_10127911	3300020020	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWILILLALGGGAFAIVRRKRDNGTEWGTGPSSTGSG
Ga0180113_14204921	3300020065	Groundwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0193737_10040132	3300021972	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWGTGPSSTGSGATTA
Ga0222625_10690722	3300022195	Groundwater Sediment	YGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGAT
Ga0222625_15488881	3300022195	Groundwater Sediment	PGEVTMGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEASGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTRSSSTGSGATA
Ga0224452_10509872	3300022534	Groundwater Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATA
Ga0222622_109155971	3300022756	Groundwater Sediment	RFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHENGHGRSHKGRWMLFLLALGGGAYALMRRMRDNGTEWGTGSGATA
Ga0207653_101290512	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VTMGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA
Ga0207643_1000012710	3300025908	Miscanthus Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA
Ga0207650_100594723	3300025925	Switchgrass Rhizosphere	MGMTGTMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIADA
Ga0207675_1011569181	3300026118	Switchgrass Rhizosphere	AARFKAEAAGHRMNDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA
Ga0256867_100749822	3300026535	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSTTDSGATA
Ga0209879_10042674	3300027056	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRENGTEWSTGSSSTGSGATA
Ga0209846_10173322	3300027277	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGSGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTGSG
Ga0209845_10090341	3300027324	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISESGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTGSGATA
Ga0208185_11246291	3300027533	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDSGTEWSTGSSSTGSGATA
Ga0209874_10253561	3300027577	Groundwater Sand	GMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSATDPGATA
Ga0209874_10415572	3300027577	Groundwater Sand	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGTSSTGSGATA
Ga0209077_11841462	3300027675	Freshwater Sediment	SHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSTSTDPGATA
Ga0209593_100969022	3300027743	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSTSTDPGATA
Ga0209382_108201012	3300027909	Populus Rhizosphere	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTDSSSTGSGATA
Ga0209382_109467891	3300027909	Populus Rhizosphere	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENEKANGNGNGKSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSNTDPGVTA
Ga0209820_11361941	3300027956	Freshwater Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTDPGATA
Ga0247825_108470682	3300028812	Soil	MTGAMKDYGSTARVKAGAAGHRMKDRMLEKRLDHSSQEAERLRLENQLLRDEVEGSRTEHRRILDLLEERTEHHDEKARSHKGRWLVFLLALGGAVYALTRRMREDGSTWETGSNTTA
Ga0307302_104963002	3300028814	Soil	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHRGRWMLILLALGGG
Ga0307310_102790282	3300028824	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLTLGGGAFAIARRMRDNGTEWGTRSSSTGSGATA
Ga0307312_103675292	3300028828	Soil	TMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWSTRSSSTGSGATA
Ga0247826_102438251	3300030336	Soil	MGMTGTMRGYGSAARLRAEAAGHRMKDRTLEKRLDRSSEEAERLRLENQLLRDEVEESRTEHHRILDLLENRMAEQDHENGHRRSHTGRWMLFLLALGGGAYALMRRMRENGTEWGTGSSATA
Ga0247826_108861712	3300030336	Soil	MSMTGAMKDYGSTARVKAGAAGHRMKDRMLEKRLDHSSQEAERLRLENQLLRDEVEGSRTEHRRILDLLEERTEHHDEKARSHKGRWLVFLLALGGAVYALTRRMREDGSTWETGSNATA
Ga0247826_118079851	3300030336	Soil	KDYGSTARVKAGAAGHRMKDRMLEKRLDHSSQEAERLRLENQLLRDEVEGSRTEHRRILDLLEERTEHHDEKARSHKGRWLVFLLALGGAVYALTRRMREDGSTWETGSNTTA
Ga0299906_102615203	3300030606	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLREEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSTTD
Ga0308203_10342691	3300030829	Soil	MKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA
Ga0308202_10268891	3300030902	Soil	GEVTMGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHRGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA
Ga0308206_10359842	3300030903	Soil	EVTMGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISEDGKANGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATA
Ga0308206_11867811	3300030903	Soil	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNDNGKSSHKGRWMLILLALGGGAFAIVRRMRDSGTEWSTGSSSTDSGATA
Ga0308204_100651792	3300031092	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGEAGGNGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATA
Ga0310886_105199561	3300031562	Soil	TMGMTGMMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA
Ga0310901_100921892	3300031940	Soil	GMMKGYGSAARFKAEAAGHRMKDRMLEKRLDRSSEEAEHLRLENQLLRDEVEESRTEHHRILDLLEERMAEQDHGNGHGRSHKGRWMLFLLALGGGAYALMRRMREDGTDRGTGSGAIA
Ga0214471_103293323	3300033417	Soil	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGNGNGRSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA
Ga0247829_108292422	3300033550	Soil	MSMTGAMKDYGSTARVKAGAAGHRMKDRMLEKRLDHSSQEAERLRLENQLLRDEVEGSRTEHRRILDLLEERTEHHDEKARSHKGRWLVFLLALGGAVYALTRRMREDGSTWETGSNTTA
Ga0364929_0172367_308_694	3300034149	Sediment	MGMTGTMKGYGSAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDSGTEWSTGSSSTGSGATA
Ga0364931_0110857_242_634	3300034176	Sediment	MGMTGTMKGYGTAARFRAEAVSHRVKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENAKENGNGNGGSHKGRWMLILLALGGGAFAIVRRMRDNGTEWSTGSSSTGSGATA
Ga0364941_044402_441_830	3300034417	Sediment	MGMTGTMKGYGTAARFRAEAVSHRMKDRVLEKRLDRTAHEAERLRLENQLLRDEVEDSRTEHHRILDLLEERISENGNGDGNGRSHKGRWMLILLALGGGAFAIARRMRDNGTEWGTGPSSTGSGATTA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085318

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences