NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F085265

Metagenome / Metatranscriptome Family F085265

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F085265
Family Type Metagenome / Metatranscriptome
Number of Sequences 111
Average Sequence Length 41 residues
Representative Sequence DNALTVSVEDARVGDRFQLAVAPDRALDAFYHPFAYAA
Number of Associated Samples 109
Number of Associated Scaffolds 111

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.90 %
% of genes near scaffold ends (potentially truncated) 94.59 %
% of genes from short scaffolds (< 2000 bps) 99.10 %
Associated GOLD sequencing projects 107
AlphaFold2 3D model prediction Yes
3D model pTM-score0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (91.892 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(16.216 % of family members)
Environment Ontology (ENVO) Unclassified
(20.721 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(49.550 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 16.67%    β-sheet: 21.21%    Coil/Unstructured: 62.12%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.36
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 111 Family Scaffolds
PF03176MMPL 27.93
PF13380CoA_binding_2 3.60
PF13191AAA_16 0.90
PF07883Cupin_2 0.90
PF00027cNMP_binding 0.90
PF07730HisKA_3 0.90
PF02190LON_substr_bdg 0.90
PF07690MFS_1 0.90
PF01343Peptidase_S49 0.90
PF07676PD40 0.90
PF02518HATPase_c 0.90

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 111 Family Scaffolds
COG1033Predicted exporter protein, RND superfamilyGeneral function prediction only [R] 27.93
COG2409Predicted lipid transporter YdfJ, MMPL/SSD domain, RND superfamilyGeneral function prediction only [R] 27.93
COG0616Periplasmic serine protease, ClpP classPosttranslational modification, protein turnover, chaperones [O] 1.80
COG3850Signal transduction histidine kinase NarQ, nitrate/nitrite-specificSignal transduction mechanisms [T] 0.90
COG3851Signal transduction histidine kinase UhpB, glucose-6-phosphate specificSignal transduction mechanisms [T] 0.90
COG4564Signal transduction histidine kinaseSignal transduction mechanisms [T] 0.90
COG4585Signal transduction histidine kinase ComPSignal transduction mechanisms [T] 0.90

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms91.89 %
UnclassifiedrootN/A8.11 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459012|GOYVCMS02F1X3MAll Organisms → cellular organisms → Bacteria531Open in IMG/M
3300000550|F24TB_11068420Not Available516Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10096010All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium733Open in IMG/M
3300000956|JGI10216J12902_108588796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium616Open in IMG/M
3300001139|JGI10220J13317_10390046All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium882Open in IMG/M
3300001686|C688J18823_11001860All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales530Open in IMG/M
3300003373|JGI25407J50210_10064713All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales916Open in IMG/M
3300003987|Ga0055471_10220889All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium596Open in IMG/M
3300003995|Ga0055438_10099055All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales821Open in IMG/M
3300005093|Ga0062594_100630705All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium948Open in IMG/M
3300005337|Ga0070682_100871975All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium737Open in IMG/M
3300005436|Ga0070713_100327546All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1416Open in IMG/M
3300005450|Ga0066682_10942620All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia512Open in IMG/M
3300005455|Ga0070663_100790306All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium813Open in IMG/M
3300005546|Ga0070696_101250443All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium629Open in IMG/M
3300005563|Ga0068855_101826487All Organisms → cellular organisms → Bacteria617Open in IMG/M
3300005615|Ga0070702_101144299All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium624Open in IMG/M
3300005843|Ga0068860_102340376All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300006031|Ga0066651_10693182All Organisms → cellular organisms → Bacteria546Open in IMG/M
3300006034|Ga0066656_11136753All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria502Open in IMG/M
3300006871|Ga0075434_101114646All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli802Open in IMG/M
3300006904|Ga0075424_102080803All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium598Open in IMG/M
3300006969|Ga0075419_10753568All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300009098|Ga0105245_12980313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium525Open in IMG/M
3300009177|Ga0105248_12245034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium621Open in IMG/M
3300009789|Ga0126307_11159488All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300009812|Ga0105067_1079285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium567Open in IMG/M
3300010036|Ga0126305_11000082All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium573Open in IMG/M
3300010037|Ga0126304_10193380All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1329Open in IMG/M
3300010041|Ga0126312_11289525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium540Open in IMG/M
3300010301|Ga0134070_10376772All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium555Open in IMG/M
3300010325|Ga0134064_10143833All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300010335|Ga0134063_10643796All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300010337|Ga0134062_10237489All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium843Open in IMG/M
3300010362|Ga0126377_13211732All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium528Open in IMG/M
3300010366|Ga0126379_13857224All Organisms → cellular organisms → Bacteria → Terrabacteria group502Open in IMG/M
3300010401|Ga0134121_11321887All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium727Open in IMG/M
3300011439|Ga0137432_1296037All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium517Open in IMG/M
3300012198|Ga0137364_11001648All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium632Open in IMG/M
3300012201|Ga0137365_11320198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium511Open in IMG/M
3300012349|Ga0137387_10587782All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium807Open in IMG/M
3300012350|Ga0137372_10199629All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1602Open in IMG/M
3300012469|Ga0150984_108179857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium549Open in IMG/M
3300012911|Ga0157301_10107586All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium829Open in IMG/M
3300012930|Ga0137407_11379813All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium670Open in IMG/M
3300012937|Ga0162653_100025998All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium818Open in IMG/M
3300012957|Ga0164303_11369199All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium527Open in IMG/M
3300012975|Ga0134110_10079188Not Available1313Open in IMG/M
3300012977|Ga0134087_10430509Not Available649Open in IMG/M
3300012986|Ga0164304_10705032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium767Open in IMG/M
3300013102|Ga0157371_10921269All Organisms → cellular organisms → Bacteria → Terrabacteria group663Open in IMG/M
3300014157|Ga0134078_10226011All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium775Open in IMG/M
3300015077|Ga0173483_10819768Not Available539Open in IMG/M
3300016341|Ga0182035_11258953Not Available662Open in IMG/M
3300017657|Ga0134074_1177027All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria752Open in IMG/M
3300017947|Ga0187785_10765220All Organisms → cellular organisms → Bacteria → Terrabacteria group511Open in IMG/M
3300017966|Ga0187776_10278405All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1080Open in IMG/M
3300018032|Ga0187788_10545128All Organisms → cellular organisms → Bacteria → Terrabacteria group507Open in IMG/M
3300018054|Ga0184621_10157761All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium817Open in IMG/M
3300018064|Ga0187773_10171139All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1136Open in IMG/M
3300018468|Ga0066662_11616787Not Available676Open in IMG/M
3300018469|Ga0190270_10002670All Organisms → cellular organisms → Bacteria8741Open in IMG/M
3300018481|Ga0190271_12882922All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium577Open in IMG/M
3300018482|Ga0066669_11881672All Organisms → cellular organisms → Bacteria556Open in IMG/M
3300019885|Ga0193747_1032602Not Available1295Open in IMG/M
3300021474|Ga0210390_11567567All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria519Open in IMG/M
3300022893|Ga0247787_1038523All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium684Open in IMG/M
3300022901|Ga0247788_1050626All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium772Open in IMG/M
3300025313|Ga0209431_10407561All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1048Open in IMG/M
3300025327|Ga0209751_10680414All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium817Open in IMG/M
3300025792|Ga0210143_1098373All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium539Open in IMG/M
3300025795|Ga0210114_1085826All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium641Open in IMG/M
3300025928|Ga0207700_10369277Not Available1252Open in IMG/M
3300025941|Ga0207711_10806090All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium874Open in IMG/M
3300025961|Ga0207712_11403578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium625Open in IMG/M
3300026312|Ga0209153_1268847All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium545Open in IMG/M
3300026325|Ga0209152_10077579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1216Open in IMG/M
3300026523|Ga0209808_1211211All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium634Open in IMG/M
3300026547|Ga0209156_10178365All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1021Open in IMG/M
3300027209|Ga0209875_1041678All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium554Open in IMG/M
3300027511|Ga0209843_1021768All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1236Open in IMG/M
3300027882|Ga0209590_10743857All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium626Open in IMG/M
3300028590|Ga0247823_11448643All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium515Open in IMG/M
3300028713|Ga0307303_10030023All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1086Open in IMG/M
3300028714|Ga0307309_10155788All Organisms → cellular organisms → Bacteria580Open in IMG/M
3300028791|Ga0307290_10102908All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1041Open in IMG/M
3300028793|Ga0307299_10101946All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1073Open in IMG/M
3300028809|Ga0247824_10515442All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium707Open in IMG/M
3300028809|Ga0247824_10769606All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium592Open in IMG/M
3300028812|Ga0247825_10926988All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium632Open in IMG/M
3300028819|Ga0307296_10518730All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium652Open in IMG/M
3300028884|Ga0307308_10536406All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium561Open in IMG/M
3300030006|Ga0299907_10141416All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1988Open in IMG/M
3300030514|Ga0268253_10357320All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales520Open in IMG/M
3300030619|Ga0268386_10930399All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium542Open in IMG/M
3300031152|Ga0307501_10117638All Organisms → cellular organisms → Bacteria → Terrabacteria group690Open in IMG/M
3300031199|Ga0307495_10057087All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300031805|Ga0318497_10489131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium689Open in IMG/M
3300031833|Ga0310917_11127694Not Available523Open in IMG/M
3300031938|Ga0308175_100404345All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1427Open in IMG/M
3300032012|Ga0310902_11089277All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium558Open in IMG/M
3300032065|Ga0318513_10259098All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium843Open in IMG/M
3300032067|Ga0318524_10467122All Organisms → cellular organisms → Bacteria → Terrabacteria group661Open in IMG/M
3300032075|Ga0310890_10357525All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1070Open in IMG/M
3300032089|Ga0318525_10176040All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1099Open in IMG/M
3300032174|Ga0307470_10065954All Organisms → cellular organisms → Bacteria1931Open in IMG/M
3300032211|Ga0310896_10862017All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium522Open in IMG/M
3300033433|Ga0326726_11318035All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium703Open in IMG/M
3300033550|Ga0247829_11029729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium684Open in IMG/M
3300033550|Ga0247829_11539147All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium549Open in IMG/M
3300034644|Ga0370548_041824All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium790Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil16.22%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil9.01%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil8.11%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.21%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil5.41%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil5.41%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands3.60%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil3.60%
Tropical PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland3.60%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.60%
Groundwater SandEnvironmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand2.70%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.70%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.70%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.80%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil1.80%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil1.80%
SoilEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Soil0.90%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment0.90%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.90%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.90%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.90%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.90%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.90%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.90%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.90%
SoilEnvironmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil0.90%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.90%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.90%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Unclassified → Tabebuia Heterophylla Rhizosphere0.90%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.90%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.90%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.90%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.90%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459012Grass soil microbial communities from Rothamsted Park, UK - July 2010 direct MP BIO1O1 lysis Rhizosphere grassEnvironmentalOpen in IMG/M
3300000550Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemlyEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300000956Soil microbial communities from Great Prairies - Kansas, Native Prairie soilEnvironmentalOpen in IMG/M
3300001139Soil microbial communities from Great Prairies - Wisconsin, Switchgrass soilEnvironmentalOpen in IMG/M
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300003373Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S5T2R1Host-AssociatedOpen in IMG/M
3300003987Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleB_D2EnvironmentalOpen in IMG/M
3300003995Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - Browns_TuleA_D2EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005450Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131EnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006034Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009789Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot28EnvironmentalOpen in IMG/M
3300009812Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N2_50_60EnvironmentalOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010301Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015EnvironmentalOpen in IMG/M
3300010325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaGEnvironmentalOpen in IMG/M
3300010335Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015EnvironmentalOpen in IMG/M
3300010337Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300011439Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2EnvironmentalOpen in IMG/M
3300012198Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012201Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012350Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012930Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012937Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t5i015EnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012975Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015EnvironmentalOpen in IMG/M
3300012977Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300013102Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C4-5 metaGHost-AssociatedOpen in IMG/M
3300014157Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300015077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)EnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300017947Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MGEnvironmentalOpen in IMG/M
3300017966Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MGEnvironmentalOpen in IMG/M
3300018032Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MGEnvironmentalOpen in IMG/M
3300018054Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1EnvironmentalOpen in IMG/M
3300018064Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP05_10_MGEnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300019885Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1m2EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300022893Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S126-311R-4EnvironmentalOpen in IMG/M
3300022901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S156-409C-4EnvironmentalOpen in IMG/M
3300025313Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)EnvironmentalOpen in IMG/M
3300025327Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_1 (SPAdes)EnvironmentalOpen in IMG/M
3300025792Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleC_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025961Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026312Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)EnvironmentalOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300026523Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)EnvironmentalOpen in IMG/M
3300026547Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)EnvironmentalOpen in IMG/M
3300027209Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_0_10 (SPAdes)EnvironmentalOpen in IMG/M
3300027511Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30 (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300028590Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day30EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028714Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_196EnvironmentalOpen in IMG/M
3300028791Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_144EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028809Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_PalmiticAcid_Day48EnvironmentalOpen in IMG/M
3300028812Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Vanillin_Day48EnvironmentalOpen in IMG/M
3300028819Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030006Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67EnvironmentalOpen in IMG/M
3300030514Agave microbial communities from Guanajuato, Mexico - Mg.Ma.rz (v2)Host-AssociatedOpen in IMG/M
3300030619Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT150D86 (Novaseq)EnvironmentalOpen in IMG/M
3300031152Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 15_SEnvironmentalOpen in IMG/M
3300031199Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 7_SEnvironmentalOpen in IMG/M
3300031805Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23EnvironmentalOpen in IMG/M
3300031833Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032065Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20EnvironmentalOpen in IMG/M
3300032067Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032089Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033433Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MNEnvironmentalOpen in IMG/M
3300033550Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4EnvironmentalOpen in IMG/M
3300034644Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_123 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
N56_010301502170459012Grass SoilPHENAVTVSVEDTRVGDRFQLTVAPDRALDAFYHPFAHAA
F24TB_1106842013300000550SoilCEEAVTVSVADDRTGDRFEIAVEHRHALDAFYHPYAYAA*
AF_2010_repII_A1DRAFT_1009601023300000597Forest SoilRENAVTVSVEDLHDGECFDLAIAPERALNAFYHPYAYAA*
JGI10216J12902_10858879623300000956SoilHPDENALTVSVEDDRAGDHFQLVVAPDRALDAFYHPFAYAA*
JGI10220J13317_1039004613300001139SoilPAANAVTVAVEDERLGDRFQIAVAPDSALDAFYHPFAYAA*
C688J18823_1100186023300001686SoilWHPREDAITVSVEDDRRGDGFQVAVAPDRALDAFYHPFAYAA*
JGI25407J50210_1006471323300003373Tabebuia Heterophylla RhizosphereRLLWHPRENGVTVSVEDSRVGDRFQLAIALDRALDAFYHPFAYAA*
Ga0055471_1022088913300003987Natural And Restored WetlandsAENALTLAVEDSHLGSRFELAVAPDRALDAFYHPFAYAA*
Ga0055438_1009905523300003995Natural And Restored WetlandsWHPRENAVTVEVEDSRAGECLQLVVAPKCALDAFYHPYAYAA*
Ga0062594_10063070513300005093SoilHPRENALTVEVEDARVGDSFQLAVAPERALDAFYHPYAYAA*
Ga0070682_10087197523300005337Corn RhizosphereLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0070713_10032754613300005436Corn, Switchgrass And Miscanthus RhizosphereVLLLWHPRADAITVSVEDHRRGDSFQLAVSADRALDAFYHPFAYAA*
Ga0066682_1094262013300005450SoilVLLLWHPREDELTVSVEDTRAGNRFQLAVARDRALDAFYHPFAYAA*
Ga0070663_10079030623300005455Corn RhizosphereAVRLLWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0070696_10125044323300005546Corn, Switchgrass And Miscanthus RhizosphereWHPRDDSVSVSVADARTGDRFQLAVAREYALDAFYHPFAYAA*
Ga0068855_10182648713300005563Corn RhizosphereDAVTVSVADDRTGDRFEIAVEHEQALDAFYHPYAYAA*
Ga0070702_10114429923300005615Corn, Switchgrass And Miscanthus RhizosphereLLLWHPAENSLTVEVEDDCLGDRFQLSVAPDCALDAFYHPYAYAA*
Ga0068860_10234037613300005843Switchgrass RhizosphereWHPRENAVTVSVEDARVGDRFEFAIPPDQALDAFYHPFAHAA*
Ga0066651_1069318223300006031SoilPREDAITVSVEDERRGDRFRIAVAPNRALDAFYHPFAYAA*
Ga0066656_1113675323300006034SoilANAVIVSVEDARAGDQFDLSVAPDRALDAFYHPFAYAA*
Ga0075434_10111464613300006871Populus RhizosphereVRLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHA
Ga0075424_10208080323300006904Populus RhizosphereTVSVTDSRTGDRFQLAVDRKRALDAFYHPFAYAA*
Ga0075419_1075356813300006969Populus RhizospherePCEDAVTVLVADDRTGDRFEIAVEHEQALDAFYHPYAYAA*
Ga0105245_1298031313300009098Miscanthus RhizosphereEHALTVSVEDSRVGVGFRLPVAPDRALDAFYHPYAYAA*
Ga0105248_1224503413300009177Switchgrass RhizosphereTLTLSVKDARAGDSFQLAIAPERALDAFYHPFAYAA*
Ga0126307_1115948813300009789Serpentine SoilGLNVVLFWHPRNCSVTVSVADSRTGAHFQLAVERDHALDAFYHPFAYVA*
Ga0105067_107928513300009812Groundwater SandKAVTVSVEDALVGDRFQVAIAPDRALDAFYHPFAYAA*
Ga0126305_1100008223300010036Serpentine SoilVLFWHPRNGSVTVSVADSRTGAHFQLAVERDHALDAFYHPFAYVA*
Ga0126304_1019338013300010037Serpentine SoilDALTVSVEDARLGDSFHIAVARDQALDAFYNPFAYAA*
Ga0126312_1128952523300010041Serpentine SoilLWHPAVNAVSVSVEDTRFDDRFEIAVAPDSALDAFYHPYAYAA*
Ga0134070_1037677223300010301Grasslands SoilLWHPCEDELTVSVEDTRAGDRFQLVVARDRALDAFYHPFAYAA*
Ga0134064_1014383323300010325Grasslands SoilEDAITVSVEDDRRGDRFQVAVAPNRALDAFYHPFAYAA*
Ga0134063_1064379613300010335Grasslands SoilLLLWHPREDELTVSVEDTRAGNRFQLAVARDRALDAFYHPFAYAA*
Ga0134062_1023748913300010337Grasslands SoilNTLTVSVEDTRAGDCFQLAIAPDSALDAFYHPFAYAA*
Ga0126377_1321173223300010362Tropical Forest SoilLLSHPREDAVTVSVEDVRACHRFELAVRRDHALDAFYHPFAYAA*
Ga0126379_1385722413300010366Tropical Forest SoilAVTVSVEDARVGCSFELAVARECALDAFYHPFAYAA*
Ga0134121_1132188713300010401Terrestrial SoilWHPQRNAVTVSVEDNRAADRFHLAVASDRALDAFYHPFAYAA*
Ga0137432_129603723300011439SoilIHVLLLWHPIENALTVSVEDSRVGCGFQLDVAPDRALDAFYHPYAYAA*
Ga0137364_1100164813300012198Vadose Zone SoilHPREDAITVSVEDDRRGDRFQLAVAPDRALDAFYHPFAYAA*
Ga0137365_1132019823300012201Vadose Zone SoilLTVSVEDARDGERFHLAIAPDCALDAFYHPFAYAA*
Ga0137387_1058778223300012349Vadose Zone SoilLTVSVTDSRTGDRFQLAVDRSQALDAFYHPFAYAA*
Ga0137372_1019962923300012350Vadose Zone SoilVLLLWHPREDELTVSVEDRRAGNGFQLAVARDRALDAFYHPFAYAA*
Ga0150984_10817985723300012469Avena Fatua RhizosphereMNAGTVSVEDNRAGDRFQLAVAADHALDAFYHPFAYAA*
Ga0157301_1010758613300012911SoilENALTVEVEDARIGDGFQLAVAPGRALDAFYHPFAYAA*
Ga0137407_1137981323300012930Vadose Zone SoilVHVLLFWHPHEDALTVSVEDARAGQRFEFSVDRSRGLDAFYHPYAYAA*
Ga0162653_10002599823300012937SoilSVSVSVADARTGDRFQLAVAREYALDAFYHPFAYAA*
Ga0164303_1136919923300012957SoilHPREDAITVSVEDDLRGDRFRIAVAPNRALDASYHPFAYAA*
Ga0134110_1007918813300012975Grasslands SoilREDAITVSVEDDRRGDRFRIAVAPNRALDAFYQPFAYAA*
Ga0134087_1043050923300012977Grasslands SoilVAPRDDALTVSVEDLRVGDRFELVVERSCALDAFYHPYAYAA*
Ga0164304_1070503223300012986SoilWHPRENALTVSVEDARVGDRFQLAVAPDRAFDAFYHPFAYAA*
Ga0157371_1092126923300013102Corn RhizosphereVLLWHPREDAVTVSVEDLRADRRFELAVERERALDAYYHPFAYAA*
Ga0134078_1022601123300014157Grasslands SoilAVTVAVEDAHGGECFHLPIAADRALDAFYHPFAYAA*
Ga0173483_1081976823300015077SoilREDAVTVSVADDRTGDRFEIDVERRHALDAFYHPYAYAA*
Ga0182035_1125895313300016341SoilSNGISVRLLWHSRENAVTVSVEDLHDGECFDLAIAPERALDAFYHPYAYAA
Ga0134074_117702723300017657Grasslands SoilLLLWHPREDELTVSVEDTRAGNRFQLAVARDRALDAFYHPFAYAA
Ga0187785_1076522013300017947Tropical PeatlandENAVTVSVEDGHDGRYFDLAVAPQHALDAFYHPFAYAA
Ga0187776_1027840513300017966Tropical PeatlandGNDALTVSVEDIRAGERLQLAVAPESALDAFNHPYAYAA
Ga0187788_1054512823300018032Tropical PeatlandLLWHPREDAVTVSVEGARAEHRFELAVGREHALDAFYHPFAHTA
Ga0184621_1015776113300018054Groundwater SedimentDAITVSVEDDRRGDRFRIAVAPNRVLDAFYHPFAYAA
Ga0187773_1017113913300018064Tropical PeatlandPSNHAVTLAIADSRTGARFELVVDRERALDAFYHPFAYAA
Ga0066662_1161678723300018468Grasslands SoilLLWHPGENAVTVSVDDARVGDRFQLSITPDRALDAFYHPFAYRHGA
Ga0190270_1000267063300018469SoilLLWHPDENELTVSVEDGRAGDRFQLVVAPDRTLDAFYHPFAYPA
Ga0190271_1288292223300018481SoilWHPGDNALTVSVEDTRAGRGFRLAVAPDRALDAFYHPYAYAA
Ga0066669_1188167213300018482Grasslands SoilLWHPRDDALTVSVEDDRRGDRFQFAVPADQALDAYYHPFAYAA
Ga0193747_103260213300019885SoilITVSVEDDRRGDRFRIAVAPNRVLDAFYHPFAYAA
Ga0210390_1156756723300021474SoilDGVTVVLLWHPREDAVTLAVSDSRTGDQFELVVASDRALEAFYHPFAPNA
Ga0247787_103852323300022893SoilDAVTVSVEDARAGDSFQLRVASDRALDAFYHPFAYAA
Ga0247788_105062613300022901SoilDDALTVSVEDARLGDRFRIAVAPERALDAFYHPFAYAA
Ga0209431_1040756123300025313SoilVLLWHPYENTLTVSVEDARVADRFQLAVAPDRALDAFYHPFAYAA
Ga0209751_1068041413300025327SoilNENALTVSVEDARVGDGFQLAVAPDRALDAFYHPFAYAA
Ga0210143_109837323300025792Natural And Restored WetlandsVGNALTVSVEDTRAGRGFRLAVAPDRALDAFNHPYAYAA
Ga0210114_108582623300025795Natural And Restored WetlandsNALTVAVEDERAGHRFHLTVAPDRALDTFYHPFAYAA
Ga0207700_1036927713300025928Corn, Switchgrass And Miscanthus RhizosphereYVLLLWHPRADAITVSVEDHRRGDSFQLAVSADRALDAFYHPFAYAA
Ga0207711_1080609013300025941Switchgrass RhizosphereVRLLWHPRENAVTVSVEDAMVGDRFEFAIPPDQALDAFYHPFAHAA
Ga0207712_1140357823300025961Switchgrass RhizosphereHPRDDSVSVSVSDARTGDRFQLAVAREYALDAFYHPFAYAA
Ga0209153_126884723300026312SoilLTVAVEDARAGDRFHLAVAPDRALDAFYHPFAYAA
Ga0209152_1007757933300026325SoilLWHPRRNAVTVSVEDTRAGGRFQLAVAAERALDAFYHPFAYAA
Ga0209808_121121123300026523SoilHPLENGLTVAVEDARDGDRFQLAVAPERALDAFYHPFAYAA
Ga0209156_1017836523300026547SoilRKNALSLSVEDTRVGDRFHLAVARDRALDAFYHPFAYAA
Ga0209875_104167823300027209Groundwater SandDNALTVSVEDARVGDRFQLAVAPDRALDAFYHPFAYAA
Ga0209843_102176823300027511Groundwater SandDENTLTVSVEDARVGDCFRLAVAPDRALDAFYHPFAYAA
Ga0209590_1074385713300027882Vadose Zone SoilGVRGLLLWHPREDALTVSVEDARAGQRFEFSVDRSRGLDAFYHPYAYAA
Ga0247823_1144864313300028590SoilPDENALTVSVDDVRAGDHFQVAVPPDRALDAFYHPFAYAA
Ga0307303_1003002323300028713SoilMNATAVTVSVTDSRTGDRFQVAVDRRCALDAFYHPFAYAA
Ga0307309_1015578813300028714SoilITVSVEDDRRGDRFQVAVAPDRALDAFYHPFAYAA
Ga0307290_1010290823300028791SoilKDAVTVSVDDAKTGDRFEIAVDRARALDAFYHPYAYAA
Ga0307299_1010194623300028793SoilCKDAVTVSVDDAKTGDRFEIAVDRTRALDAFYHPYAYAA
Ga0247824_1051544213300028809SoilTLLWHPNENALIVSVEDAHAGRGFQLAVAPDRALDAFYHPYAYAA
Ga0247824_1076960613300028809SoilIQVTLLWHPGDNALTVSVEDNRAGRGFRLAVAPDRALDAFYHPYAYAA
Ga0247825_1092698823300028812SoilAANAVSVAVEDERLGDRFQIAVAPDSALDAFYHPFAYAA
Ga0307296_1051873023300028819SoilITVSVEDARADDCFQLAVSPERALDAFHHPFAYAA
Ga0307308_1053640623300028884SoilPGEDAVTVSVTDSRTGDRFQLAVDRKQALDAFYHPFAYAA
Ga0299907_1014141623300030006SoilLAENALTVCVEDRRDGDHVQLAVASDRALGAFYHPFAYAA
Ga0268253_1035732023300030514AgavePGEDAVTVVVEDLRTGVRIEMAVDRRDALAAFHHPFAYAP
Ga0268386_1093039913300030619SoilWHADVNAVTVSVEDVRVGDRFQIAVAPDRALDAFYHPFAYAA
Ga0307501_1011763813300031152SoilRENTLTVSVEDARVGDQFDIAVAPDRALDAFYHPFAYAA
Ga0307495_1005708713300031199SoilEHAITVSVEDDRRGDRFQVAVAPDRALDAFYHPFAYAA
Ga0318497_1048913123300031805SoilVTVSVDDSRAGSHFELAVARDRALQAFYHPFAYAA
Ga0310917_1112769423300031833SoilNAVTVSVEDLHDGEYFDLAIAPEHALDAFYHPYAYAA
Ga0308175_10040434533300031938SoilSLFWHQDDDSVTVSVADGCTGERFQLVVARESVVDAFYHPFAYAA
Ga0310902_1108927713300032012SoilHPGDDAVTVSVEDARAGDSFQLRVASDRALDAFYHPFAYAA
Ga0318513_1025909813300032065SoilHPLKSVLTVSVEDTRIGDRFQLAVAPERALDAFYHPFAYAA
Ga0318524_1046712223300032067SoilDAVTVSVEDPRTEHRFELVVERERALDAFYHPFAYAA
Ga0310890_1035752523300032075SoilHPAANAVSVAVEDERLGDRFQIAVAPDSALDAFYHPFAYAA
Ga0318525_1017604013300032089SoilLKSVLTVSVEDTRIGDRFQLAVAPERALDAFYHPFAYAA
Ga0307470_1006595413300032174Hardwood Forest SoilAVTVSVADDRTGDRFEIAVEHEQALDAFYHPYAYAA
Ga0310896_1086201713300032211SoilWHPAANAVTVAVEDERLGDRFQIAVAPDSALDAFYHPFAYAA
Ga0326726_1131803523300033433Peat SoilSNAVTVSIEDARVGDCFEFAIPPDQALDAFYHPFAHAA
Ga0247829_1102972913300033550SoilVSVSVADARTGDRFQLAVAREYALDAFYHPFAYAA
Ga0247829_1153914723300033550SoilALTVSVEDAHAGRGFQLAVAPDRALDAFYHPYAYAA
Ga0370548_041824_2_1153300034644SoilDALTVSVEDDRLGDRFQLAVAPDRALDAFYHPFAYAA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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