Metagenome / Metatranscriptome Family F085217

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F085217
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	94 residues
Representative Sequence	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQTSEITLSYNQLSIRAPPRN
Number of Associated Samples	96
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	72.28 %
% of genes near scaffold ends (potentially truncated)	21.62 %
% of genes from short scaffolds (< 2000 bps)	59.46 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.090 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine (51.351 % of family members)
Environment Ontology (ENVO)	Unclassified (72.072 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (98.198 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 20.83% β-sheet: 33.33% Coil/Unstructured: 45.83%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF07715	Plug	53.15
PF01124	MAPEG	29.73
PF02646	RmuC	4.50
PF00106	adh_short	1.80
PF02492	cobW	0.90
PF02600	DsbB	0.90
PF03783	CsgG	0.90
PF10035	DUF2179	0.90
PF01503	PRA-PH	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1322	DNA anti-recombination protein (rearrangement mutator) RmuC	Replication, recombination and repair [L]	4.50
COG1462	Curli biogenesis system outer membrane secretion channel CsgG	Cell wall/membrane/envelope biogenesis [M]	0.90
COG1495	Disulfide bond formation protein DsbB	Posttranslational modification, protein turnover, chaperones [O]	0.90

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.09 %
Unclassified	root	N/A	9.91 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.09 %
Unclassified	root	N/A	9.91 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.09 %
Unclassified	root	N/A	9.91 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	84.68 %
Unclassified	root	N/A	9.91 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	75.68 %
Unclassified	root	N/A	9.91 %

Name	Rank	Taxonomy	Distribution
unclassified Gammaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria	39.64 %
Unclassified	root	N/A	9.91 %
Gammaproteobacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis	7.21 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	39.64 %
Unclassified	root	N/A	9.91 %
SAR86 cluster	clade	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	7.21 %

Name	Rank	Taxonomy	Distribution
Gammaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	39.64 %
Unclassified	root	N/A	9.91 %
SAR86 cluster bacterium SAR86A	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A	3.60 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001833\|ACM24_1000644	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1221	Open in IMG/M
3300001949\|GOS2238_1039934	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1681	Open in IMG/M
3300001951\|GOS2249_1047552	All Organisms → cellular organisms → Bacteria → Proteobacteria	2394	Open in IMG/M
3300001961\|GOS2240_1004816	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1968	Open in IMG/M
3300001965\|GOS2243_1004701	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	888	Open in IMG/M
3300001966\|GOS2245_1103138	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1787	Open in IMG/M
3300001973\|GOS2217_10127348	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4495	Open in IMG/M
3300002033\|GOS24894_10350002	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	883	Open in IMG/M
3300002033\|GOS24894_10471955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	883	Open in IMG/M
3300002040\|GOScombined01_102012416	All Organisms → cellular organisms → Bacteria	1458	Open in IMG/M
3300002040\|GOScombined01_102602732	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1079	Open in IMG/M
3300002040\|GOScombined01_103349993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300002040\|GOScombined01_104956106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1600	Open in IMG/M
3300003185\|JGI26064J46334_1044034	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	852	Open in IMG/M
3300003477\|nap3_10024629	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1296	Open in IMG/M
3300005404\|Ga0066856_10505900	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	514	Open in IMG/M
3300005432\|Ga0066845_10274283	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	652	Open in IMG/M
3300005523\|Ga0066865_10016078	All Organisms → cellular organisms → Bacteria	2397	Open in IMG/M
3300005523\|Ga0066865_10028712	All Organisms → cellular organisms → Bacteria → Proteobacteria	1858	Open in IMG/M
3300005934\|Ga0066377_10156300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	694	Open in IMG/M
3300005946\|Ga0066378_10010000	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3065	Open in IMG/M
3300005960\|Ga0066364_10001485	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	6269	Open in IMG/M
3300006024\|Ga0066371_10162456	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	688	Open in IMG/M
3300007114\|Ga0101668_1003170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A	2644	Open in IMG/M
3300007137\|Ga0101673_1028471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	882	Open in IMG/M
3300007152\|Ga0101672_1002426	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster	2640	Open in IMG/M
3300007267\|Ga0101447_111213	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3241	Open in IMG/M
3300009481\|Ga0114932_10145532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1458	Open in IMG/M
3300012920\|Ga0160423_10476322	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	850	Open in IMG/M
3300012928\|Ga0163110_10692137	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	794	Open in IMG/M
3300012928\|Ga0163110_11371496	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	571	Open in IMG/M
3300012936\|Ga0163109_10200847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1463	Open in IMG/M
3300012954\|Ga0163111_10245063	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A	1569	Open in IMG/M
3300012954\|Ga0163111_12028698	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	579	Open in IMG/M
3300017734\|Ga0187222_1001288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7435	Open in IMG/M
3300017750\|Ga0181405_1105993	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	707	Open in IMG/M
3300017756\|Ga0181382_1088331	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	849	Open in IMG/M
3300017759\|Ga0181414_1114545	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	708	Open in IMG/M
3300017769\|Ga0187221_1038688	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1576	Open in IMG/M
3300017771\|Ga0181425_1141859	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	764	Open in IMG/M
3300017951\|Ga0181577_10754896	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	588	Open in IMG/M
3300020055\|Ga0181575_10275974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	961	Open in IMG/M
3300020239\|Ga0211501_1031663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1107	Open in IMG/M
3300020247\|Ga0211654_1014572	All Organisms → cellular organisms → Bacteria	1281	Open in IMG/M
3300020266\|Ga0211519_1012049	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2169	Open in IMG/M
3300020267\|Ga0211648_1000659	All Organisms → cellular organisms → Bacteria	12313	Open in IMG/M
3300020269\|Ga0211484_1017560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1461	Open in IMG/M
3300020274\|Ga0211658_1005596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3177	Open in IMG/M
3300020276\|Ga0211509_1029486	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1311	Open in IMG/M
3300020278\|Ga0211606_1014407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1847	Open in IMG/M
3300020288\|Ga0211619_1004181	All Organisms → cellular organisms → Bacteria	2716	Open in IMG/M
3300020319\|Ga0211517_1005005	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2781	Open in IMG/M
3300020325\|Ga0211507_1098551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	575	Open in IMG/M
3300020334\|Ga0211593_1011090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2002	Open in IMG/M
3300020336\|Ga0211510_1004563	All Organisms → cellular organisms → Bacteria → Proteobacteria	3921	Open in IMG/M
3300020337\|Ga0211508_1008849	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2431	Open in IMG/M
3300020339\|Ga0211605_1012393	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	2040	Open in IMG/M
3300020340\|Ga0211594_1113923	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	569	Open in IMG/M
3300020342\|Ga0211604_1007239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2942	Open in IMG/M
3300020346\|Ga0211607_1022419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1417	Open in IMG/M
3300020349\|Ga0211511_1018847	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1853	Open in IMG/M
3300020349\|Ga0211511_1093434	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	705	Open in IMG/M
3300020365\|Ga0211506_1200189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	558	Open in IMG/M
3300020374\|Ga0211477_10015709	All Organisms → cellular organisms → Bacteria → Proteobacteria	3523	Open in IMG/M
3300020377\|Ga0211647_10118124	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	898	Open in IMG/M
3300020378\|Ga0211527_10036401	All Organisms → cellular organisms → Bacteria → Proteobacteria	1598	Open in IMG/M
3300020381\|Ga0211476_10012869	All Organisms → cellular organisms → Bacteria → Proteobacteria	4148	Open in IMG/M
3300020392\|Ga0211666_10118119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1056	Open in IMG/M
3300020401\|Ga0211617_10085179	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1320	Open in IMG/M
3300020403\|Ga0211532_10071207	All Organisms → cellular organisms → Bacteria → Proteobacteria	1560	Open in IMG/M
3300020405\|Ga0211496_10025873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2090	Open in IMG/M
3300020408\|Ga0211651_10068415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A	1521	Open in IMG/M
3300020409\|Ga0211472_10018382	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2723	Open in IMG/M
3300020409\|Ga0211472_10030669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2089	Open in IMG/M
3300020413\|Ga0211516_10009342	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	5976	Open in IMG/M
3300020414\|Ga0211523_10296214	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	663	Open in IMG/M
3300020416\|Ga0211644_10206297	Not Available	806	Open in IMG/M
3300020419\|Ga0211512_10005311	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	7258	Open in IMG/M
3300020421\|Ga0211653_10284591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	718	Open in IMG/M
3300020428\|Ga0211521_10128595	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1199	Open in IMG/M
3300020429\|Ga0211581_10022464	All Organisms → cellular organisms → Bacteria → Proteobacteria	2689	Open in IMG/M
3300020429\|Ga0211581_10212319	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	785	Open in IMG/M
3300020433\|Ga0211565_10007054	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	4869	Open in IMG/M
3300020433\|Ga0211565_10264029	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	750	Open in IMG/M
3300020437\|Ga0211539_10101089	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1159	Open in IMG/M
3300020442\|Ga0211559_10017973	All Organisms → cellular organisms → Bacteria → Proteobacteria	3589	Open in IMG/M
3300020446\|Ga0211574_10016522	All Organisms → cellular organisms → Bacteria → Proteobacteria	3507	Open in IMG/M
3300020450\|Ga0211641_10249287	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	875	Open in IMG/M
3300020454\|Ga0211548_10300125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	783	Open in IMG/M
3300020455\|Ga0211664_10205878	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	915	Open in IMG/M
3300020457\|Ga0211643_10564366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	559	Open in IMG/M
3300020462\|Ga0211546_10067710	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Gammaproteobacteria incertae sedis → SAR86 cluster → SAR86 cluster bacterium SAR86A	1742	Open in IMG/M
3300020463\|Ga0211676_10116136	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1736	Open in IMG/M
3300020471\|Ga0211614_10061673	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	1570	Open in IMG/M
3300022074\|Ga0224906_1104881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	831	Open in IMG/M
3300026081\|Ga0208390_1001643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	8073	Open in IMG/M
3300026093\|Ga0208624_1014797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → unclassified Gammaproteobacteria → Gammaproteobacteria bacterium	2520	Open in IMG/M
3300026270\|Ga0207993_1006503	All Organisms → cellular organisms → Bacteria	4082	Open in IMG/M
3300027702\|Ga0209036_1029807	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	1860	Open in IMG/M
3300027774\|Ga0209433_10006215	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3725	Open in IMG/M
3300027830\|Ga0209359_10009846	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	3047	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified	51.35%
Oceanic	Environmental → Aquatic → Marine → Oceanic	28.83%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	8.11%
Strait	Environmental → Aquatic → Marine → Strait	6.31%
Volcanic	Environmental → Aquatic → Marine → Volcanic	3.60%
Coastal	Environmental → Aquatic → Marine → Coastal	0.90%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.90%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	51.35%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	22.52%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	6.31%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	6.31%
Unclassified	Environmental → Aquatic → Marine → Volcanic → Unclassified	3.60%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	1.80%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	0.90%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	51.35%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	20.72%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	6.31%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	6.31%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	5.41%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	1.80%
Volcanic Co2 Seeps	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seeps	1.80%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.90%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.90%
Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Seawater	0.90%
Marine Surface Water	Environmental → Aquatic → Marine → Coastal → Unclassified → Marine Surface Water	0.90%
Estuarine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Estuarine	0.90%
Deep Subsurface	Environmental → Aquatic → Marine → Volcanic → Unclassified → Deep Subsurface	0.90%
Volcanic Co2 Seep Seawater	Environmental → Aquatic → Marine → Volcanic → Unclassified → Volcanic Co2 Seep Seawater	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001833	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM24, ROCA_DNA012_0.2um_2l	Environmental	Open in IMG/M
3300001949	Marine microbial communities from Panama City, Panama - GS022	Environmental	Open in IMG/M
3300001951	Marine microbial communities from North Seamore Island, Equador - GS034	Environmental	Open in IMG/M
3300001961	Marine microbial communities from Dirty Rock, Cocos Island, Costa Rica - GS025	Environmental	Open in IMG/M
3300001965	Marine microbial communities from Coastal Floreana, Equador - GS028	Environmental	Open in IMG/M
3300001966	Marine microbial communities from Roca Redonda, Equador - GS030	Environmental	Open in IMG/M
3300001973	Marine microbial communities from Bermuda, Atlantic Ocean - GS001	Environmental	Open in IMG/M
3300002033	Marine microbial communities from the Sargasso Sea - GS000a &b	Environmental	Open in IMG/M
3300002040	GS000c - Sargasso Station 3	Environmental	Open in IMG/M
3300003185	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV	Environmental	Open in IMG/M
3300003477	Estuarine microbial communities from the Sarno estuary, Gulf of Naples, Italy - Sample Station 3	Environmental	Open in IMG/M
3300005404	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV205	Environmental	Open in IMG/M
3300005432	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201310SV78	Environmental	Open in IMG/M
3300005523	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265	Environmental	Open in IMG/M
3300005934	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B	Environmental	Open in IMG/M
3300005946	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A	Environmental	Open in IMG/M
3300005960	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A	Environmental	Open in IMG/M
3300006024	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_DCM_ad_63m_LV_B	Environmental	Open in IMG/M
3300007114	Seawater microbiome, Papua New Guinea CO2 seep, Upa-Upasina 'bubble', waterEBis4	Environmental	Open in IMG/M
3300007137	Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'control', water-dc	Environmental	Open in IMG/M
3300007152	Seawater microbiome, Papua New Guinea CO2 seep, Dobu 'bubble', waterEBds3	Environmental	Open in IMG/M
3300007267	Marine coastal surface water microbial communities in Port Hacking, Sydney, Australia ? TJ12 time point	Environmental	Open in IMG/M
3300007326	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - KN S7 Surf_A metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009481	Deep subsurface microbial communities from Kolumbo volcano to uncover new lineages of life (NeLLi) - 2SBTROV12_ACTIVE470 metaG	Environmental	Open in IMG/M
3300012919	Marine microbial communities from the Central Pacific Ocean - Fk160115 60m metaG	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012928	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St17 metaG	Environmental	Open in IMG/M
3300012936	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St13 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300017734	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 4 SPOT_SRF_2009-09-24 (version 2)	Environmental	Open in IMG/M
3300017750	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 28 SPOT_SRF_2011-11-29	Environmental	Open in IMG/M
3300017756	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22	Environmental	Open in IMG/M
3300017759	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 37 SPOT_SRF_2012-11-28	Environmental	Open in IMG/M
3300017769	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 5 SPOT_SRF_2009-10-22 (version 2)	Environmental	Open in IMG/M
3300017771	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 48 SPOT_SRF_2013-11-13	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300020055	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101411CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020239	Marine microbial communities from Tara Oceans - TARA_B100000003 (ERX555909-ERR598959)	Environmental	Open in IMG/M
3300020247	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556048-ERR598962)	Environmental	Open in IMG/M
3300020266	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX556082-ERR598951)	Environmental	Open in IMG/M
3300020267	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556026-ERR599108)	Environmental	Open in IMG/M
3300020269	Marine microbial communities from Tara Oceans - TARA_A100001035 (ERX556080-ERR599041)	Environmental	Open in IMG/M
3300020274	Marine microbial communities from Tara Oceans - TARA_B100000900 (ERX556029-ERR598943)	Environmental	Open in IMG/M
3300020276	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289007-ERR315858)	Environmental	Open in IMG/M
3300020278	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556076-ERR599151)	Environmental	Open in IMG/M
3300020288	Marine microbial communities from Tara Oceans - TARA_B100000161 (ERX556132-ERR599045)	Environmental	Open in IMG/M
3300020319	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX556039-ERR599073)	Environmental	Open in IMG/M
3300020323	Marine microbial communities from Tara Oceans - TARA_B100001027 (ERX555979-ERR599120)	Environmental	Open in IMG/M
3300020325	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX556073-ERR598966)	Environmental	Open in IMG/M
3300020334	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555938-ERR599091)	Environmental	Open in IMG/M
3300020336	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289008-ERR315860)	Environmental	Open in IMG/M
3300020337	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289009-ERR315861)	Environmental	Open in IMG/M
3300020339	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX555929-ERR599080)	Environmental	Open in IMG/M
3300020340	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX555960-ERR599119)	Environmental	Open in IMG/M
3300020342	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556117-ERR599036)	Environmental	Open in IMG/M
3300020346	Marine microbial communities from Tara Oceans - TARA_B100000674 (ERX556057-ERR599069)	Environmental	Open in IMG/M
3300020349	Marine microbial communities from Tara Oceans - TARA_E500000081 (ERX289006-ERR315859)	Environmental	Open in IMG/M
3300020365	Marine microbial communities from Tara Oceans - TARA_B100000034 (ERX555943-ERR599143)	Environmental	Open in IMG/M
3300020374	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291766-ERR318618)	Environmental	Open in IMG/M
3300020377	Marine microbial communities from Tara Oceans - TARA_B100000927 (ERX556007-ERR599065)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020381	Marine microbial communities from Tara Oceans - TARA_A100001011 (ERX291769-ERR318620)	Environmental	Open in IMG/M
3300020392	Marine microbial communities from Tara Oceans - TARA_B100000963 (ERX555916-ERR599163)	Environmental	Open in IMG/M
3300020401	Marine microbial communities from Tara Oceans - TARA_B100000212 (ERX555985-ERR599139)	Environmental	Open in IMG/M
3300020403	Marine microbial communities from Tara Oceans - TARA_B100000085 (ERX556015-ERR599145)	Environmental	Open in IMG/M
3300020405	Marine microbial communities from Tara Oceans - TARA_B000000532 (ERX556129-ERR599012)	Environmental	Open in IMG/M
3300020408	Marine microbial communities from Tara Oceans - TARA_B100000925 (ERX555963-ERR599118)	Environmental	Open in IMG/M
3300020409	Marine microbial communities from Tara Oceans - TARA_A100001403 (ERX555912-ERR599106)	Environmental	Open in IMG/M
3300020413	Marine microbial communities from Tara Oceans - TARA_S200000501 (ERX555962-ERR599092)	Environmental	Open in IMG/M
3300020414	Marine microbial communities from Tara Oceans - TARA_B100000035 (ERX556019-ERR599028)	Environmental	Open in IMG/M
3300020416	Marine microbial communities from Tara Oceans - TARA_B100001109 (ERX556137-ERR599039)	Environmental	Open in IMG/M
3300020419	Marine microbial communities from Tara Oceans - TARA_X000000263 (ERX555964-ERR598955)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020421	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556005-ERR599007)	Environmental	Open in IMG/M
3300020428	Marine microbial communities from Tara Oceans - TARA_E500000331 (ERX556032-ERR599094)	Environmental	Open in IMG/M
3300020429	Marine microbial communities from Tara Oceans - TARA_B100000614 (ERX556134-ERR599032)	Environmental	Open in IMG/M
3300020433	Marine microbial communities from Tara Oceans - TARA_B100001989 (ERX556106-ERR599030)	Environmental	Open in IMG/M
3300020437	Marine microbial communities from Tara Oceans - TARA_B100000282 (ERX555906-ERR599074)	Environmental	Open in IMG/M
3300020442	Marine microbial communities from Tara Oceans - TARA_B100002019 (ERX556121-ERR599162)	Environmental	Open in IMG/M
3300020446	Marine microbial communities from Tara Oceans - TARA_B100001287 (ERX556031-ERR598989)	Environmental	Open in IMG/M
3300020448	Marine microbial communities from Tara Oceans - TARA_B100000941 (ERX555919-ERR598954)	Environmental	Open in IMG/M
3300020450	Marine microbial communities from Tara Oceans - TARA_B100000575 (ERX555933-ERR599077)	Environmental	Open in IMG/M
3300020454	Marine microbial communities from Tara Oceans - TARA_B100001769 (ERX556037-ERR599170)	Environmental	Open in IMG/M
3300020455	Marine microbial communities from Tara Oceans - TARA_B100000965 (ERX555917-ERR599081)	Environmental	Open in IMG/M
3300020457	Marine microbial communities from Tara Oceans - TARA_B100001113 (ERX555941-ERR599014)	Environmental	Open in IMG/M
3300020462	Marine microbial communities from Tara Oceans - TARA_B100001559 (ERX556040-ERR598986)	Environmental	Open in IMG/M
3300020463	Marine microbial communities from Tara Oceans - TARA_B100001057 (ERX555988-ERR599050)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300022074	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 56 SPOT_SRF_2014-09-10 (v2)	Environmental	Open in IMG/M
3300026081	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_SurfaceA_ad_6m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026093	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_DCM_ad_71m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026270	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV265 (SPAdes)	Environmental	Open in IMG/M
3300027702	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - DCM_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300027774	Marine microbial communities from oxygen minimum zone in mesopelagic equatorial Pacific - METZYME_5_50m (SPAdes)	Environmental	Open in IMG/M
3300027830	Marine microbial communities from the Southern Atlantic Ocean, analyzing organic carbon cycling - Surface_A/KNORR_S2/LV (SPAdes)	Environmental	Open in IMG/M
3300031785	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-25_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ACM24_10006443	3300001833	Marine Plankton	MPMKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPR
GOS2238_10399341	3300001949	Marine	GIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAISFDFLDAYQPSEITLSYNQLSIRAPPSN*
GOS2249_10475522	3300001951	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELSEDCSTCLAETSEFALGVSPSLTTATTFDFLDINHASEITLSNNQLSIRAPPSN*
GOS2240_10048163	3300001961	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQVEYVQDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN*
GOS2243_10047012	3300001965	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDLGEQFHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHSSEITLSKNKLSIRAPPRN*
GOS2245_11031382	3300001966	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVEPTEDCSTCLAETSEFALGVSPSLTTATTFDFLGIYHASEITLSKNKLSIRAPPRN*
GOS2217_101273484	3300001973	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIVFDFLDAYQSSEITLSYNQLSIRAPPRN*
GOS24894_103500022	3300002033	Marine	MPMKFKLFAILFALVFSAGIISHETSHFELNHGEHVYNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN*
GOS24894_104719552	3300002033	Marine	MPMKFKLFAILFALVFSAGIISHETSHFELNHGEHVYNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
GOScombined01_1020124163	3300002040	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHSSEITLSKNKLSIRAPPRN*
GOScombined01_1026027322	3300002040	Marine	MKFKLYAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELIEDCSTCLAETGEFALGVSPSLTTATTFDFLGIYHASEITLSKNKLSIRAPPSN*
GOScombined01_1033499932	3300002040	Marine	MPMKFKLFAILFALIFSAGIISHETSHFELNHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEIPLSYNQLSIRAPPRN*
GOScombined01_1049561062	3300002040	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVEPTEDCSTCLAETSEFALGVSPSLTTATTFDFFDVYHASEITLSKNKLSIRAPPRN*
JGI26064J46334_10440342	3300003185	Marine	MPMKFKLFAILFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAEQIECVQDNTVLNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPRN*
nap3_100246291	3300003477	Estuarine	LIFAMKFKLFAFFFAIIFSAGIISHETSHFEMDHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN*
Ga0066856_105059002	3300005404	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTYDFLDIYHASEITLSKNQLSIRAPPSN*
Ga0066845_102742831	3300005432	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGELVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHASEIILSKNKLSIRAPPSN*
Ga0066865_100160782	3300005523	Marine	LPMKFKLFAILFALVFSAGIISHEASHFELDRGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAIAFDFLDAFQTSEITLLNNQLSIRAPPTN*
Ga0066865_100287123	3300005523	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGELVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDVYHVSEITLSKNKLSIRAPPRN*
Ga0066377_101563002	3300005934	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQTSEITLSYNQLSIRAPPRN*
Ga0066378_100100001	3300005946	Marine	LFAFVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQTSEITLSYNQLSIRAPPRN*
Ga0066364_100014856	3300005960	Marine	MKFKLFAFLFAIVFSAGIISHETSHFEMDHGDHVHEEHSNELSEDCSTCLAEHSEFVQDESIYQLTAIFSDFLDVKQTRQITLFSNQLSIRAPPKS*
Ga0066364_103644022	3300005960	Marine	MKFKLFAFLFAIIFSAGIISHETSHFEVDHGDHVHEEHLNELSEDCSTCLAEHSEYVQDEGTYQLTAIFSDFLDVKQTRQITLFSNQLSIRA
Ga0066371_101624562	3300006024	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHTVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQSSEITLSYNQLSIRAPPRN*
Ga0101668_10031704	3300007114	Volcanic Co2 Seep Seawater	MKFKLFAILFALVFSAGIISHETSHFEMDHGEHAHNEHEVELTEDCSTCLAEQIEYVQDDTVVNPIAIAFDFLDAYQSSEITLSYNQLSIRAPPRN*
Ga0101673_10284712	3300007137	Volcanic Co2 Seeps	MKFKLFAILFALVFSAGIISHETSHFEMDHGEHAHNEHEVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQSSEITLSYNQLSIRAPPRN*
Ga0101672_10024262	3300007152	Volcanic Co2 Seeps	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHEVELTEDCSTCLAEQIEYVHDDTVVNPTAISFDFLDAYQPSEITLSYNQLSIRAPPSN*
Ga0101447_1112132	3300007267	Marine Surface Water	MKFKLFAILFALVFSAGIISHETSHFEMDHGEHAHNEHEVELTEDCSTCLAEQIEYVHDDTVVNPTTISFDFLDAYQPREITLSYNQLSIRAPPRN*
Ga0079243_12023031	3300007326	Marine	FLFAIVFSAGIISHETSHFEMDHGDHVHEEHSNELSEDCSTCLAEHSEFVQDESTYRLTAIFSDFLDVKQTRQITLFSNQLSIRAPPKS*
Ga0114932_101455321	3300009481	Deep Subsurface	MPMKFKLFAILFALVFSAGIISHETSHFELNHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIVFDFLDAHQSSEITLSYNQLSIRAPPRN*
Ga0160422_101982722	3300012919	Seawater	MKFKLFAVLFALVFSVGIISHETSHYELDHGDHDHADHSVELSEDCSTCLAEQNEFVQEETTHQPSATISDFLVVKKTRQINLLPNQLSIRAPPKN*
Ga0160423_104763222	3300012920	Surface Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHSEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTAKTFDFLDVYHASEITLSKNKLSIRAPPRN*
Ga0163110_106921372	3300012928	Surface Seawater	MKFKLFAILFALVFSAGVISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN*
Ga0163110_113714961	3300012928	Surface Seawater	MKFKLFTVLFALVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAEASEFALSKSPTHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN*
Ga0163109_102008472	3300012936	Surface Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTKATTFDFLDVYHASEITLSKNKLSIRAPPRN*
Ga0163111_102450632	3300012954	Surface Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDVYHASEITLSKNKLSIRAPPRN*
Ga0163111_120286982	3300012954	Surface Seawater	MKFKLFAILFALVFSAGIISHETSHFELDHGKTVHSEHSIELTENCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN*
Ga0187222_10012888	3300017734	Seawater	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETSEFALGVSPSLSSATTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0181405_11059932	3300017750	Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETSEFALGVSPSLSSATTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0181382_10883312	3300017756	Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETSEFALGVSPSLSSATTFDFLDIYHVSEITLSKNQLSIRAPPSN
Ga0181414_11145452	3300017759	Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETGEFALGVSPSLSSASTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0187221_10386882	3300017769	Seawater	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETSEFALGVSPSLSSASTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0181425_11418592	3300017771	Seawater	MKFKLFAVLFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETSEFALGVSPSLSSASTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0181577_107548961	3300017951	Salt Marsh	IISHETSHFELDHGEHVHNEHAVELSEDCSTCLVEQIEYVQDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN
Ga0181575_102759742	3300020055	Salt Marsh	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELSEDCSTCLVEQIEYVQDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN
Ga0211501_10316632	3300020239	Marine	MKFKLFAILFALVFSAGIISHETSHFEMDHGEHVHNEHEVELTEDCSTCLAEQIEYVHDDTVVNPTNISFDFLDAYQPREITLSYNQLSIRAPPRN
Ga0211654_10145721	3300020247	Marine	FSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTARTFDFLDVYHASEITLSKNQLSIRAPPSN
Ga0211519_10120492	3300020266	Marine	MKFKLFAILFALVFSAGIISHETSHFELNHGEYVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211648_10006592	3300020267	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHSSEITLSKNKLSIRAPPRN
Ga0211484_10175603	3300020269	Marine	MKFKLFAILFALVFSAGIISHETSHFEMDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDIYVNPTAISIDFLGAYQTSEITLSYNQLSIRAPPRN
Ga0211658_10055962	3300020274	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDVYHASEITLSKNKLSIRAPPRN
Ga0211509_10294862	3300020276	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQSSEITLSYNQLSIRAPPRN
Ga0211606_10144072	3300020278	Marine	SFTGLIAFMKFKLFSVLFVLVFSAGIISHETSHFELDHGEHVHGEHSIEISEDCSTCLAEASEFALSKSPAHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211619_10041813	3300020288	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211517_10050053	3300020319	Marine	FLFAIVFSAGIISHETSHFEMDHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211517_10770511	3300020319	Marine	ETSHFEMDHGDHVHEEHSNKLSEDCSTCLAEHSEYVQDESTYQLTVIFSDFLDVKQTRQITLFSNQLSIRAPPKS
Ga0211673_10014974	3300020323	Marine	MKFKLFAVLFALVFSVGIISHETSHYELDHGDHDHADHSVELSEDCSTCLAEQSEFVQEETTHQPSATISDFLVVKKTRQINLLPNQLSIRAPPKN
Ga0211507_10985511	3300020325	Marine	VFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDVYHASEITLSKNKLSIRAPPRN
Ga0211593_10110902	3300020334	Marine	MKFKLFSVFFVLVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAEASEFALSKSPAHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211510_10045633	3300020336	Marine	MKFKLFAILFALVFSAGIISHETSHFELDPGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211508_10088493	3300020337	Marine	MKFKLFAILFALVFSAGIISHETSHFELNHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIVFDFLDAYQSSEITLSYNQLSIRAPPRN
Ga0211605_10123932	3300020339	Marine	MKFKLFSVLFVLVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAEASEFALSKSPAHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211594_11139232	3300020340	Marine	MKFKLFSVFFVLVFSAGIISHETSHFELDHGEHVHGEHSIEISEDCSTCLAEASEFALSKSPAHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211604_10072393	3300020342	Marine	FVLVFSAGIISHETSHFELDHGEHVHGEHSIEISEDCSTCLAEASEFALSESPTHFTATIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211607_10224192	3300020346	Marine	MKFKLISVLFVLVFSAGIISHEKSHFELDHGEHFHGEHSIEISEDCSTCLAEASEFALSKSPAHFTAKIFDFLGDNHLSEITLSFNQTSIRAPPSN
Ga0211511_10188473	3300020349	Marine	MKFKLFAILFALVFSAGIISHETSHFELNHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIVFDFLDAYQTSEIPLSYNQLSIRAPPRN
Ga0211511_10934342	3300020349	Marine	MKFKLFAVLFALVFSAGIISHETSHFELNYGEHVHNEHAVDLSEDCSTCLAEQIEYVHDDTVVNSTAIAFDFPDAYQTSEITLSYNQLSIRAPPR
Ga0211506_12001891	3300020365	Marine	LILPMKFKLIAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAIAFDFLDAFQTREITLLNNQLSIRAPPSN
Ga0211477_100157093	3300020374	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAVVFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211647_101181241	3300020377	Marine	AGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAESSEFALSESPTHFTATIFDLLGDNHSSKITLSFNQTSIRAPPSN
Ga0211527_100364013	3300020378	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAISFDFLDAYQPSEITLSYNQLSIRAPPSN
Ga0211476_100128694	3300020381	Marine	MKFKLFAILFALVFSAGIISHETSHFELNHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211666_101181192	3300020392	Marine	MKFKLFSVLFVLVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAESSDFALSESPTHFTATIFDLLGDNHSSKITLSFNQTSIRAPPSN
Ga0211617_100851792	3300020401	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLLNNQLSIRAPPTN
Ga0211532_100712073	3300020403	Marine	MKFKLFAILFTLVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAISFDFLDAYQPSEITLSYNQLSIRAPPSN
Ga0211496_100258732	3300020405	Marine	LPMKFKLFAILFALVFSAGIISHETSHFEMDHGEHAHNEHEVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQSSEITLSYNQLSIRAPPRN
Ga0211651_100684152	3300020408	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHASEIILSKNKLSIRAPPRN
Ga0211472_100183822	3300020409	Marine	NRFLFCSFTGLILPMKFKLFAILFALVFSAGIISHETSHFEMDHGEHVHNEHEVELTEDCSTCLAEQIEYVHDDTVVNPTNISFDFLDAYQPREITLSYNQLSIRAPPRN
Ga0211472_100306691	3300020409	Marine	FKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDIYVNPTAISIDFLGAYQTSEINLFNNQLSIRAPPRN
Ga0211516_100022133	3300020413	Marine	MAMKFKLFAFLFAIVFSAGIISHETSHFEMDHGDHVHEEHSNKLSEDCSTCLAEHSEYVQDESTYQLTVIFSDFLDVKQTRQITLFSNQLSIRAPPKS
Ga0211516_100093423	3300020413	Marine	MKFKLFAFLFAFVFSAGIISHETSHFEMDHGEHVHNEHAVDLSEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0211523_102962142	3300020414	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVHDDTVVNPTAIAFDFLDAFQTREITLLNNQLSIRAPPSN
Ga0211644_102062971	3300020416	Marine	LDHGENFHGEHSIEISEDCSTCLAESSEFALSESPTHFTATIFDLLGDNHSSKITLSFNQTSIRAPPSN
Ga0211512_100053118	3300020419	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGQHVHNEHAVELTEDCSTCLAEQIEFVHDDTVVNPTTISFDFLDAYQPREITLSYNQLSIRSPPRN
Ga0211580_100190473	3300020420	Marine	MKFRLFAVLFALVFSVGIISHETSHYELDHGDHDHSDHSVELSEDCSTCLAEQSEFVQEETTHQPSATISDFLVVKKTRQINLLSNQLSIRAPPKN
Ga0211653_102845912	3300020421	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDVYHASE
Ga0211521_101285951	3300020428	Marine	FALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQSSEITLSYNQLSIRAPPRN
Ga0211581_100224642	3300020429	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNGHAVELTEDCSTCLAEQIEYVHDDTVVNPTAIAFDFLDAYQTSEITLLNNQLSIRAPPSN
Ga0211581_102123191	3300020429	Marine	LIAFMKFKLFSVLFVLVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAESSEFALSESPSHFTATIFDLLGDNHSSKITLSFNQTSIRAPPSN
Ga0211565_100070542	3300020433	Marine	MKFKLFSVFFALVFSAGIISHETSHFELDHGEHEHNEHAVELTEDCSTCLAEATEFAIGVSLSLTTAATFDFLDVYHASEITLSNNQLSIRAPPRN
Ga0211565_102640291	3300020433	Marine	MKFKLFSVLFALVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAEASEFALSKSPAHLTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0211539_101010892	3300020437	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPSN
Ga0211559_100179732	3300020442	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDINHASEITLSKNKLSIRAPPSN
Ga0211574_100165223	3300020446	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDINHASEITLSNNQLSIRAPPSN
Ga0211638_100311573	3300020448	Marine	MKFKLFAFLFAIIFSAGIISHEISHFEVDHGDHDHEEHSNELSENCSTCLAEHSEFVQDESTYHLTTIFSDFLDVKQTRQITLLSNQLSIRAPPKN
Ga0211641_102492872	3300020450	Marine	MKFKLFAIFFALVFSAGIISHETSHFELDHSEHAQNEHAVELLKDCSTCLAEASEFTLDESPNLTAASIFDFLDNVHASEISLSYNQTSIRAPPNN
Ga0211548_103001252	3300020454	Marine	AGIISHETSHFELDHGEHVHNEHTVELTEDCSTCLAEQIEFVHDDTVVNPTTISFDFLDAYQPREITLSYNQLSIRSPPRN
Ga0211664_102058782	3300020455	Marine	MKFKLFSIFFALVFSAGIISHETSHFELDHGEHVHNEHAVELLKDCSTCLAEASEFTLGESPNLTAASIFDFLDNVHASEISLSYNQTSIRAPPSN
Ga0211643_105643661	3300020457	Marine	KLFSVLFVLVFSAGIISHETSHFELDHGEHFHGEHSIEISEDCSTCLAESSDFALSESPTHFTATIFDLLGDNHSSKITLSFNQTSIRAPPSN
Ga0211546_100677101	3300020462	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGQHVHNEHAVELTEDCSTCLAEQIEFVHDDTVVNPTTISFDFLDAYQTSEITLLNNQLSIRAPPSN
Ga0211676_101161361	3300020463	Marine	FSAGIISHETSHFELDHGEHVHNEQVVELTEDCSTCLAEATEFALGVSPSLTSASTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0211614_100616731	3300020471	Marine	ITSMKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLDAYQTSEITLSYNQLSIRAPPRN
Ga0224906_11048811	3300022074	Seawater	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAETGEFALGVSPSLSSASTFDFLDIYHASEITLSKNQLSIRAPPSN
Ga0208390_10016436	3300026081	Marine	MKFKLFAFLFAIVFSAGIISHETSHFEMDHGDHVHEEHSNELSEDCSTCLAEHSEFVQDESIYQLTAIFSDFLDVKQTRQITLFSNQLSIRAPPKS
Ga0208624_10147971	3300026093	Marine	MKFKLFAILFALVFSAGIISHETSHFELDHGEHVHNEHAVELTEDCSTCLAEQIEYVQDDTVVNPTAISFDFLEAYQTSEITLSYNQLSIRAPPRN
Ga0207993_10065032	3300026270	Marine	MKFKLFAVLFALVFSAGIISHETSHFELDHGELVHNEHAVELTEDCSTCLAETSEFALGVSPSLTTATTFDFLDIYHASEIILSKNKLSIRAPPSN
Ga0209036_10298072	3300027702	Marine	MPMKFKLFAILFALVFSAGIISHETSHFELDHGQHVHNEHAVELTEDCSTCLAEQIECVQDNTVLNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPRN
Ga0209433_100062153	3300027774	Marine	MKFKLFSVLFVLVFSAGIISHETSHFKLDHGEHVHGEHSIEISEDCSTCLAEASEFALSKSPVHFTAKIFDFLGDNHSSEITLSFNQTSIRAPPSN
Ga0209359_100098462	3300027830	Marine	MPMKFKLFAILFALVFSAGIISHETSHFELDHGEQVHNEHAVELTEDCSTCLAEQIECVQDNTVLNPTAIAFDFLDAYQPSEITLSYNQLSIRAPPRN
Ga0209359_103487962	3300027830	Marine	MKFKLFAVLFALVFSVGIISHETSHFEMDHGDHIHEEHSNELSEDCSTCLAEHSECVQDESTYQLTAIFSDFLDEKQTRQITLFSNQLSIRAPPKS
Ga0310343_102717272	3300031785	Seawater	MSMKFKLFAVLFALVFSVGIISHETSHYELDHGDHDHADHSVELSEDCSTCLAEQSEFVQEETTHQPSATISDFLVVKKTRQINLLPNQLSIRAPPKN

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F085217

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences