Metagenome / Metatranscriptome Family F084952

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084952
Family Type	Metagenome / Metatranscriptome
Number of Sequences	111
Average Sequence Length	103 residues
Representative Sequence	MTWRQRGFLAVFLGMALTSCAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARD
Number of Associated Samples	77
Number of Associated Scaffolds	111

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	5.50 %
% of genes near scaffold ends (potentially truncated)	97.30 %
% of genes from short scaffolds (< 2000 bps)	88.29 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.198 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (61.261 % of family members)
Environment Ontology (ENVO)	Unclassified (83.784 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (63.063 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 15.27% β-sheet: 21.37% Coil/Unstructured: 63.36%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 111 Family Scaffolds
PF02515	CoA_transf_3	85.59
PF02771	Acyl-CoA_dh_N	4.50
PF14525	AraC_binding_2	0.90
PF01381	HTH_3	0.90

COG ID	Name	Functional Category	% Frequency in 111 Family Scaffolds
COG1804	Crotonobetainyl-CoA:carnitine CoA-transferase CaiB and related acyl-CoA transferases	Lipid transport and metabolism [I]	85.59
COG1960	Acyl-CoA dehydrogenase related to the alkylation response protein AidB	Lipid transport and metabolism [I]	4.50

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.20 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	97.30 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	56.76 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	46.85 %
Unclassified	root	N/A	1.80 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	46.85 %
Unclassified	root	N/A	1.80 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300003219\|JGI26341J46601_10019528	All Organisms → cellular organisms → Bacteria → Proteobacteria	2222	Open in IMG/M
3300005332\|Ga0066388_104745961	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300005363\|Ga0008090_10064663	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	533	Open in IMG/M
3300005363\|Ga0008090_15892219	All Organisms → cellular organisms → Bacteria → Proteobacteria	868	Open in IMG/M
3300005764\|Ga0066903_100561809	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1961	Open in IMG/M
3300010361\|Ga0126378_10527942	All Organisms → cellular organisms → Bacteria → Proteobacteria	1295	Open in IMG/M
3300010398\|Ga0126383_10155346	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2140	Open in IMG/M
3300010398\|Ga0126383_13103259	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	542	Open in IMG/M
3300016270\|Ga0182036_10861572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300016270\|Ga0182036_11157832	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	642	Open in IMG/M
3300016270\|Ga0182036_11169766	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	639	Open in IMG/M
3300016294\|Ga0182041_10188315	All Organisms → cellular organisms → Bacteria → Proteobacteria	1632	Open in IMG/M
3300016294\|Ga0182041_11176789	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	698	Open in IMG/M
3300016319\|Ga0182033_10549130	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300016341\|Ga0182035_10048286	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2872	Open in IMG/M
3300016341\|Ga0182035_10993313	All Organisms → cellular organisms → Bacteria → Proteobacteria	744	Open in IMG/M
3300016357\|Ga0182032_10069854	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2367	Open in IMG/M
3300016371\|Ga0182034_10470655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1043	Open in IMG/M
3300016387\|Ga0182040_10426866	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1045	Open in IMG/M
3300016387\|Ga0182040_11019372	All Organisms → cellular organisms → Bacteria → Proteobacteria	691	Open in IMG/M
3300016422\|Ga0182039_10540259	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300017942\|Ga0187808_10383654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	641	Open in IMG/M
3300018058\|Ga0187766_11074840	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	576	Open in IMG/M
3300021178\|Ga0210408_11272856	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300021560\|Ga0126371_10196449	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2110	Open in IMG/M
3300021560\|Ga0126371_10285212	All Organisms → cellular organisms → Bacteria → Proteobacteria	1774	Open in IMG/M
3300021560\|Ga0126371_13442416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	534	Open in IMG/M
3300027824\|Ga0209040_10073846	All Organisms → cellular organisms → Bacteria → Proteobacteria	1989	Open in IMG/M
3300031231\|Ga0170824_116479371	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300031543\|Ga0318516_10558149	All Organisms → cellular organisms → Bacteria → Proteobacteria	655	Open in IMG/M
3300031545\|Ga0318541_10665211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	582	Open in IMG/M
3300031546\|Ga0318538_10164074	All Organisms → cellular organisms → Bacteria	1178	Open in IMG/M
3300031546\|Ga0318538_10488781	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	667	Open in IMG/M
3300031561\|Ga0318528_10203200	All Organisms → cellular organisms → Bacteria → Proteobacteria	1060	Open in IMG/M
3300031561\|Ga0318528_10211594	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1038	Open in IMG/M
3300031564\|Ga0318573_10030553	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2518	Open in IMG/M
3300031640\|Ga0318555_10225230	All Organisms → cellular organisms → Bacteria → Proteobacteria	1012	Open in IMG/M
3300031679\|Ga0318561_10664966	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300031680\|Ga0318574_10613571	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	638	Open in IMG/M
3300031713\|Ga0318496_10100843	All Organisms → cellular organisms → Bacteria → Proteobacteria	1548	Open in IMG/M
3300031724\|Ga0318500_10161762	All Organisms → cellular organisms → Bacteria → Proteobacteria	1058	Open in IMG/M
3300031724\|Ga0318500_10297304	All Organisms → cellular organisms → Bacteria → Proteobacteria	790	Open in IMG/M
3300031736\|Ga0318501_10302833	All Organisms → cellular organisms → Bacteria → Proteobacteria	853	Open in IMG/M
3300031744\|Ga0306918_10010085	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	5317	Open in IMG/M
3300031744\|Ga0306918_10023385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3789	Open in IMG/M
3300031747\|Ga0318502_10691071	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	616	Open in IMG/M
3300031748\|Ga0318492_10430267	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300031748\|Ga0318492_10472373	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031748\|Ga0318492_10796821	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031751\|Ga0318494_10505501	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300031751\|Ga0318494_10673415	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300031763\|Ga0318537_10048652	All Organisms → cellular organisms → Bacteria → Proteobacteria	1535	Open in IMG/M
3300031763\|Ga0318537_10225575	All Organisms → cellular organisms → Bacteria → Proteobacteria	696	Open in IMG/M
3300031763\|Ga0318537_10342303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	552	Open in IMG/M
3300031764\|Ga0318535_10341471	All Organisms → cellular organisms → Bacteria → Proteobacteria	669	Open in IMG/M
3300031769\|Ga0318526_10157278	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	925	Open in IMG/M
3300031770\|Ga0318521_10122519	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1454	Open in IMG/M
3300031770\|Ga0318521_10269374	All Organisms → cellular organisms → Bacteria → Proteobacteria	998	Open in IMG/M
3300031778\|Ga0318498_10346193	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	664	Open in IMG/M
3300031782\|Ga0318552_10652170	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	537	Open in IMG/M
3300031792\|Ga0318529_10469675	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	585	Open in IMG/M
3300031794\|Ga0318503_10036670	All Organisms → cellular organisms → Bacteria → Proteobacteria	1458	Open in IMG/M
3300031796\|Ga0318576_10274499	All Organisms → cellular organisms → Bacteria → Proteobacteria	796	Open in IMG/M
3300031796\|Ga0318576_10596680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	520	Open in IMG/M
3300031805\|Ga0318497_10056309	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2038	Open in IMG/M
3300031805\|Ga0318497_10130196	All Organisms → cellular organisms → Bacteria → Proteobacteria	1367	Open in IMG/M
3300031819\|Ga0318568_11044384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300031821\|Ga0318567_10289664	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	923	Open in IMG/M
3300031833\|Ga0310917_10798467	All Organisms → cellular organisms → Bacteria → Proteobacteria	637	Open in IMG/M
3300031833\|Ga0310917_10812740	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	631	Open in IMG/M
3300031835\|Ga0318517_10061561	All Organisms → cellular organisms → Bacteria → Proteobacteria	1593	Open in IMG/M
3300031845\|Ga0318511_10223240	All Organisms → cellular organisms → Bacteria → Proteobacteria	841	Open in IMG/M
3300031845\|Ga0318511_10531614	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	545	Open in IMG/M
3300031846\|Ga0318512_10441475	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	656	Open in IMG/M
3300031859\|Ga0318527_10238203	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300031859\|Ga0318527_10518493	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300031879\|Ga0306919_11276251	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	556	Open in IMG/M
3300031890\|Ga0306925_10834221	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	954	Open in IMG/M
3300031897\|Ga0318520_10232564	All Organisms → cellular organisms → Bacteria → Proteobacteria	1095	Open in IMG/M
3300031910\|Ga0306923_10401806	All Organisms → cellular organisms → Bacteria → Proteobacteria	1559	Open in IMG/M
3300031912\|Ga0306921_10229724	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2174	Open in IMG/M
3300031941\|Ga0310912_10174560	All Organisms → cellular organisms → Bacteria → Proteobacteria	1633	Open in IMG/M
3300031941\|Ga0310912_10381180	All Organisms → cellular organisms → Bacteria → Proteobacteria	1097	Open in IMG/M
3300031942\|Ga0310916_11003124	All Organisms → cellular organisms → Bacteria → Proteobacteria	697	Open in IMG/M
3300031945\|Ga0310913_10654242	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	744	Open in IMG/M
3300031945\|Ga0310913_10754442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	687	Open in IMG/M
3300031945\|Ga0310913_11195941	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	529	Open in IMG/M
3300031946\|Ga0310910_10005318	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7676	Open in IMG/M
3300031946\|Ga0310910_10274915	All Organisms → cellular organisms → Bacteria → Proteobacteria	1321	Open in IMG/M
3300031954\|Ga0306926_11692442	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	722	Open in IMG/M
3300031981\|Ga0318531_10252596	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	796	Open in IMG/M
3300032025\|Ga0318507_10360925	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	633	Open in IMG/M
3300032035\|Ga0310911_10506402	All Organisms → cellular organisms → Bacteria → Proteobacteria	700	Open in IMG/M
3300032035\|Ga0310911_10555508	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	666	Open in IMG/M
3300032041\|Ga0318549_10492397	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	551	Open in IMG/M
3300032051\|Ga0318532_10340312	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300032052\|Ga0318506_10304824	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	706	Open in IMG/M
3300032063\|Ga0318504_10163549	All Organisms → cellular organisms → Bacteria → Proteobacteria	1029	Open in IMG/M
3300032063\|Ga0318504_10272423	All Organisms → cellular organisms → Bacteria → Proteobacteria	799	Open in IMG/M
3300032076\|Ga0306924_11234600	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	807	Open in IMG/M
3300032076\|Ga0306924_11380830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	753	Open in IMG/M
3300032089\|Ga0318525_10381578	All Organisms → cellular organisms → Bacteria → Proteobacteria	722	Open in IMG/M
3300032090\|Ga0318518_10525979	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	605	Open in IMG/M
3300032091\|Ga0318577_10086729	All Organisms → cellular organisms → Bacteria → Proteobacteria	1454	Open in IMG/M
3300032094\|Ga0318540_10067717	All Organisms → cellular organisms → Bacteria → Proteobacteria	1634	Open in IMG/M
3300032180\|Ga0307471_104210389	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	508	Open in IMG/M
3300032205\|Ga0307472_101018122	All Organisms → cellular organisms → Bacteria → Proteobacteria	777	Open in IMG/M
3300032261\|Ga0306920_100538885	All Organisms → cellular organisms → Bacteria → Proteobacteria	1730	Open in IMG/M
3300032261\|Ga0306920_101598173	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	927	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	97.30%
Aquatic	Environmental → Aquatic	2.70%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	97.30%
Freshwater	Environmental → Aquatic → Freshwater	2.70%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	94.59%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	2.70%
Loam	Environmental → Terrestrial → Soil → Loam	1.80%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.90%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	87.39%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	5.41%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	1.80%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	1.80%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.80%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	0.90%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.90%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	61.26%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	23.42%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.41%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	1.80%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.80%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.80%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	1.80%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	0.90%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.90%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.90%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300003219	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017942	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_3	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300021178	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-M	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031545	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031763	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f29	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031769	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f24	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031778	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f24	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031792	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f23	Environmental	Open in IMG/M
3300031794	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031835	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031945	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032035	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170	Environmental	Open in IMG/M
3300032041	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f22	Environmental	Open in IMG/M
3300032051	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f26	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032063	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f17	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032089	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f23	Environmental	Open in IMG/M
3300032090	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f22	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI26341J46601_100195283	3300003219	Bog Forest Soil	MTCCRGSLLAASLGVALTACAQLTPEETAAPGTSVVASRQDSSSRFVGFVGPKAQHAPPFLNVPGTNFYCLRSFVDLQTGEAAHQLYVSDSYFGAERGWNAARDSAGNPLQ
Ga0066388_1047459612	3300005332	Tropical Forest Soil	MTRLGWGLLALCSGLALTSCAQLAPRQPAAGTVGIEAREDASQRFIAFIGPKTRHAPPFLGIPETNFYCLRSFVDRRTGEAAHQLYVTDSYFGAERGWN
Ga0008090_100646632	3300005363	Tropical Rainforest Soil	MTWRQRGFLAVFLGMALTSCAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARD
Ga0008090_158922191	3300005363	Tropical Rainforest Soil	MIWRQGGFFAVFLGMALTACTQLTPRQPADGVLVTEAPEDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDR
Ga0066903_1005618091	3300005764	Tropical Forest Soil	MTRLGWGLLALCSGLALTSCAQLAPRQPAAGTVGIEAREDASQRFIVLIGPKTQHAPPFLGIPETNFYCLRSFVDRRTGEAAHQLYVTDSYFGAERGWNAARDSSGVPLSFV
Ga0126378_105279422	3300010361	Tropical Forest Soil	MALTACAQLTPRQTDSGVLATQAREDASHRFILLIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAA
Ga0126383_101553461	3300010398	Tropical Forest Soil	MSCCRRAYLAISLGIALTSCTNPAPPQPATGIPNVEARQDPTHRFITFIGPKTQHAPPFLGIPETNLYCLRSFIDRQTGETAHQLYVTDSYFG
Ga0126383_131032592	3300010398	Tropical Forest Soil	MSCRQRAYLAISLGIGLTACANLAPRQPATGIPSVEAREDSSHRFIIFIGPKAQHAPPFLGVPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWDAARDSTGASLPFIAIG
Ga0182036_108615722	3300016270	Soil	MKWRQRGFMAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNAARDSTGATLPFVAIGHDEIS
Ga0182036_111578321	3300016270	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGA
Ga0182036_111697661	3300016270	Soil	MTRLGWGLLALCSGLALTSCAQLASRQPAAGTVGIEAREDASQRFIVLIGPKTQHAPPFLGIPETNFYCLRSFVDRRTGEAAHQLYVTDSYFGAERGWNAARDSSGAPLSFVAI
Ga0182041_101883152	3300016294	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPEPNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARDSAGSP
Ga0182041_111767892	3300016294	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGAALPFVAIGHDEISCDAGCAYVEEFAANSST
Ga0182033_105491302	3300016319	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFIDRRTGETAHQLYVTDSYFGAER
Ga0182033_119145752	3300016319	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVD
Ga0182035_100482863	3300016341	Soil	MTWRRRRFLAVSLGMALTSCTQLASRQPGAGAPPAEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDW
Ga0182035_109933131	3300016341	Soil	MTWRRRGFLAVSLGMALTSCAQLASRQPNADAPLVEAREDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERD
Ga0182032_100698543	3300016357	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTDKTAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCS
Ga0182034_104706551	3300016371	Soil	MNWLQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAE
Ga0182040_104268662	3300016387	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGAALPFVAIGHDEISCDAGCAYVEEF
Ga0182040_110193721	3300016387	Soil	MNWPQRGFIATFLGIALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFIDRRTGETAHQLYVTDSY
Ga0182039_105402592	3300016422	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGDTAHQLYVTDSYFGAERGWNA
Ga0187808_103836541	3300017942	Freshwater Sediment	MTCCRGRLLAACLGVALTACAQLSPEETAAPRTPVVAVRQDSSSRFVGFVGPRAQHAPPFLNVPGTNFYCLRSFVDLQTGEAAHQLYVSDSYFGAERGWNAARDSAGSPLQFIPISSDEI
Ga0187766_110748401	3300018058	Tropical Peatland	MSFRRRGILVIPLGVALASCARVAPPELAAGVLVTENREDSSHQFMTFIGPKAQHAPAFLGIPETNFYCLRSFVDRQTGESAHQLYVTDSYFG
Ga0210408_112728562	3300021178	Soil	MTFRRRLVAMCWGVALSSCAEIAPQQPATGTPPIVATREDSSQRFITFVSPKAQHAPPFLGVPETNFYCLRSFVDRRTRETAHQLYVTDSYFGAERGWNAARDNAGAPLALIAIGQDEITCDAGCSYVEEFAAKLPESA
Ga0126371_101964491	3300021560	Tropical Forest Soil	MTRLGWGLLALCSGLALTSCAQLAPRQPAAGTVGIEAREDPSHRFITFIGPKTQHAPPFLGIPETNLYCLRSFIDRRTGETAHQLYVTD
Ga0126371_102852121	3300021560	Tropical Forest Soil	MNWRQRGFITTFLAMALASCAQLTPRAPAGGVLVTEAREDSSHRFISFIGPKAQHAPAFLGIPQTNFYCLRSFVDRRTGETAHQLYVTDSY
Ga0126371_134424162	3300021560	Tropical Forest Soil	MSCRQRAYLAISLGIGLTACANLAPRQPATGIPSVEAREDSSHRFIIFIGPKAQHAPPFLGVPETNFYCLRSFVDRRNGETAHQLYVTDSYFGAERG
Ga0209040_100738463	3300027824	Bog Forest Soil	MTCCRGSLLAASLGVALTACAQLTPEETAAPGTSVVASRQDSSSRFVGFVGPKAQHAPPFLNVPGTNFYCLRSFVDLQTGEAAHQLYVSDSYFGAERGWNAARDSAGNPLQF
Ga0170824_1164793711	3300031231	Forest Soil	MTFRRRRLVAMCWGVALSSCAELGPQQPATGTPPIVAAREDSSQRFITFVSPKAQHAPPFLGVPETNFYCLRSFVDRRTRETGHQLYVTDSYF
Ga0318516_105581491	3300031543	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLY
Ga0318541_106652112	3300031545	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYLGAERGWNAAHDSAGAPLTFVAIGHD
Ga0318538_101640741	3300031546	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWN
Ga0318538_104887811	3300031546	Soil	MNWLQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWSAARDSTGAT
Ga0318528_102032002	3300031561	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGGPLPFVAIG
Ga0318528_102115941	3300031561	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYLGAERGWNAAHDSAGAPLTFVAIGHDEITCDAGCSY
Ga0318573_100305531	3300031564	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWNAARDSAGS
Ga0318555_102252302	3300031640	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLY
Ga0318561_106649662	3300031679	Soil	MKWRQRGFTVLLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWN
Ga0318574_106135711	3300031680	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNAARDSTGAMLPFVAIGHDEISCDA
Ga0318496_101008431	3300031713	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARNSAGSPLQFVKIS
Ga0318500_101617621	3300031724	Soil	MTWRRRGFLAVSLGMALTSCAQLASRQPNADAPLVEAREDSSQRFVGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQVYVSDSYF
Ga0318500_102973041	3300031724	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDLSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETA
Ga0318501_103028332	3300031736	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARD
Ga0306918_100100851	3300031744	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEIT
Ga0306918_100233851	3300031744	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSY
Ga0306918_105934553	3300031744	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSF
Ga0318502_106910711	3300031747	Soil	MNWLQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLYV
Ga0318492_104302671	3300031748	Soil	MNWLQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLY
Ga0318492_104723732	3300031748	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQLGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLEIPETNFYCLRSFVDRRTGETAHQLYVSDSYF
Ga0318492_107968212	3300031748	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDR
Ga0318494_105055012	3300031751	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGGPLPFVAIGHDEISCD
Ga0318494_106734151	3300031751	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSYVEEFAAN
Ga0318537_100486521	3300031763	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFG
Ga0318537_102255752	3300031763	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTDKTAHQLY
Ga0318537_103423032	3300031763	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFIDRRSGETAHQLYVTDSYFGAERG
Ga0318535_103414712	3300031764	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTDKTAHQLYV
Ga0318526_101572782	3300031769	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNAARDSTGATLPFVAIGHDEISCDAGCSYVEEFAA
Ga0318521_101225192	3300031770	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCS
Ga0318521_102693742	3300031770	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVD
Ga0318498_103461931	3300031778	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNAARDSTGATLPFVAI
Ga0318552_106521701	3300031782	Soil	MTCHRRAFLAASLGMVLTSCAQLAPRQPAAGPLVIEVREDSSQRFITFTGPKAQHAPRFLKIPETNFYCLRSFIDRRTGETAHQLYVTDSYSGAERGWNAA
Ga0318529_104696752	3300031792	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFGAERGWNAARDSAGAPL
Ga0318503_100366702	3300031794	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDW
Ga0318576_102744992	3300031796	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFIDRRSGETAHQLYVTDSYFGAERGWN
Ga0318576_105966802	3300031796	Soil	MSSRRCGFLAIPFGVALASCAAVAPPAPPAGTPSVEAREDPSHRFITFIGPKAQHAPPFLGIPETNFYCLRSFIDHRTGETAHQLYVTDSYLGTERGWNAARDSMGASLPFIAIGDDEITCD
Ga0318497_100563091	3300031805	Soil	MTCCHGRLVAASLVVALTACAQLTPAGTAARGAPVAASRQDLSSRFVAFVGPKTQHAPPFLNIPGTNFYCLRSFVDLQTGDAAHQLYVSDSYFGAERGWNAARDSAGSPLQFVQISH
Ga0318497_101301962	3300031805	Soil	MICRRRGLIAASLGVALTSCAQLAPQQPAGALVEVREDSSHRFITFIGPKAQHTPPFLGVPETNFYCLRSFVDRQTGETAHQLYVTDSYFGAER
Ga0318568_110443841	3300031819	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGGPLPFVAIGHD
Ga0318567_102896642	3300031821	Soil	MKWRQEGLLAVFLGMALTSCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEITCDAGCSY
Ga0310917_107984671	3300031833	Soil	MNWRQGGFLAILLGMALTSCAQLTPEPSVAGVLVTEAREDSSHRFILFIGPKAQHAPPFLGIPETNFYCLRSFVDRRTGETAHQ
Ga0310917_108127401	3300031833	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYLGAERGWNA
Ga0318517_100615611	3300031835	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVS
Ga0318511_102232401	3300031845	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWN
Ga0318511_105316142	3300031845	Soil	MTCRQRGCLAVFLGIAMTSCARLAHEQPTAGVLVTEAREDSSHRFILFIGLKGQHAPPFLGIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERDWNAARDSAGISLPFVAIGHD
Ga0318512_104414751	3300031846	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQLGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARDSAGSPLQF
Ga0318527_102382032	3300031859	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQLGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLGIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARDSAGSPLQF
Ga0318527_105184931	3300031859	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYFGAERGWNAARDSAGAPLPFVAIGHDEIT
Ga0306919_112762512	3300031879	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFG
Ga0306925_108342211	3300031890	Soil	MTRLGWGLLALCSGLALTSCAQLASRQPAAGTVGIEAREDASQRFIVLIGPKTQHAPPFLGIPETNFYCLRSFVDRRTGEAAHQLYVTDSYFGAERGWNAARDSTGAALPFVPIGRD
Ga0318520_102325642	3300031897	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTA
Ga0306923_104018061	3300031910	Soil	MTSCAHLAHEQPTAGVLVTEAREDSSHRFILFIGLKGQHAPPFLGIPQTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERDWNAARDSAGI
Ga0306921_102297243	3300031912	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGGP
Ga0310912_101745602	3300031941	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLGIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARNSAGSPLQFVKIS
Ga0310912_103811802	3300031941	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDSSHRFNLFIGPKAQHAPPFLDIPETNFYCLRSFIDRRTGETAHQ
Ga0310916_110031241	3300031942	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFIDRRTGETAHQLYV
Ga0310913_106542422	3300031945	Soil	MTWRRRGFLAVSLGMALTSCAQLASRQPNADAPLVEAREDSSQRFVGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQVYVSDSYFGSERGWNAARDSAGNPLRFVQISHDE
Ga0310913_107544422	3300031945	Soil	MNWRKGSFLAIFLEMALTACAQLTPRQTDSGVLLTEAREDSSHRFILFIGPRAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWNAARDSAGAALPFVAIGHDEISCDA
Ga0310913_111959411	3300031945	Soil	MNWLQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERGWSAARDSAGATLPFVAI
Ga0310910_100053181	3300031946	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTG
Ga0310910_102749152	3300031946	Soil	MNWRKGSFLTLFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGEIA
Ga0306926_116924421	3300031954	Soil	MTWRQGRFLAIVLGMALTSCAQLALRQRESGVLVTEAREDSSHRFISFIGPKAQHAPPFLDIPETNFYCLRSFVDRRTGESAHQLYVTDSYFGAERAWNAARDSAGAVLQFVAIGHDEISCDAGCS
Ga0318531_102525961	3300031981	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGDTAHQLYVTDSYFGAERGWNAAHDGAGAPLPFVAIGHDEITCDTGCSYVEE
Ga0318507_103609252	3300032025	Soil	MNWPQRGLIATFLGMALTSCASLAPRPPDAGVLVTEAREDSSHRFILFIGPKAQHAPPFLEIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAER
Ga0310911_105064022	3300032035	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNA
Ga0310911_105555082	3300032035	Soil	MTWRQRGFLAIFLGMALTSCAQLAPRQTDSGVLVTEAREDLSHRFILFIGPKAQHAPPFLDIPETNFYCLRSFVDRRTGETAHQLYVTDSYLGAERGWNAAHDSAGAPLTFVAIGHDEIT
Ga0318549_104923972	3300032041	Soil	MTCHRRAFLAASLGMVLTSCAQLAPRQPAAGPLVIEVREDSSQRFITFTGPKAQHAPRFLKIPETNFYCLRSFIDRRTGETAHQLYVTDSYSG
Ga0318532_103403122	3300032051	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRS
Ga0318506_103048242	3300032052	Soil	MTCHRRAFLAASLGMVLTSCAQLAPRQPAAGPLVIEVREDSSQRFITFTGPKAQHAPRFLKIPETNFYCLRSFIDRRTGETAHQLYVTDSYSGAERGWNAARDSTGAALPFVP
Ga0318504_101635491	3300032063	Soil	MTCHRRAFLAASLGMVLTSCAQLAPRQPAAGPLVIEVREDSSQRFITFTGPKAQHAPRFLKIPETNFYCLRSFIDRRTGETAHQLYVTDSYSGAERGW
Ga0318504_102724231	3300032063	Soil	MKWRQEGLLAVFLGMALISCAQLTPRQSDSGVLVTEAREDSSHRFILFMGPRAQHAPPFLDIPETNFYCLRSFVDRRTGKTAHQLYVTDSYF
Ga0306924_112346002	3300032076	Soil	MTWRRRGFLAVSLGMALTSCAQLASRQPNADAPLVEAREDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQVYVSDSYFGSERGWNAARDSAGSPLQFVQISHDEISCDAGCSYVEEFAAILPESQLQASP
Ga0306924_113808302	3300032076	Soil	MSSRRCGFLAIPFGVALASCAAVAPPAPPTGTPDVEAREDSSHRFITFIGPKAQHAPPFLGIAETNFYCLRSFIDHRTGETAHQLYVTDSYLGTERGWNAARDSMGASLPFIAIGDDE
Ga0318525_103815782	3300032089	Soil	MTWRRRRFFAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLGIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAARNS
Ga0318518_105259792	3300032090	Soil	MTCRQRGCLAVFLGIAMTSCARLAHEQPTAGVLVTEAREDSSHRFILFIGLKGQHAPPFLGIPETNFYCLRSFVDRRTGETAHQLYVTDSYFGAERDWNAARDSAGISLPFVAIGHDEISCDAGC
Ga0318577_100867291	3300032091	Soil	MNWRKGSFLTIFLGMALTACAQLTPRQTDSGVLVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGETAHQLYVTD
Ga0318540_100677171	3300032094	Soil	MTWRRRRFLAVSLGMALTSCAQLASRQPGAGAPPVEVSEDSSQRFIGFIGPKAQHAPRFLDIPETNFYCLRSFVDRRTGETAHQLYVSDSYFGAERDWSAAR
Ga0307471_1042103892	3300032180	Hardwood Forest Soil	MTSCRRRLFAASLGAALTACAQLTPGPPGASRPAVLAREDLTPGFIGFIGPKAQHAPPFLDTPGTNFYCLRSFLDRRTGEASHQLYVSDSYFGAERD
Ga0307472_1010181222	3300032205	Hardwood Forest Soil	MTFRWRWLVAMCWGVALSSCAEIAPQQPATGTPVVEAREESSHRFITFIGPKAQHAPPFFGVPETNFYCLRSFVDRRTGEIAHQLYVTNSYFGAERDWNAARDNAGA
Ga0306920_1005388851	3300032261	Soil	MNWPQGGFLAIFLGMALTACAQLTLRPPTAGVVVTEAREDSSHRFILFIGPRAQHAPPFLDIPDTNFYCLRSFVDRRTGDTAHQLYVTDSY
Ga0306920_1015981732	3300032261	Soil	MKWRQRGFIAPLLGMALTSCAQLTPRPPDTGVLVTEAREDSSHRFILFIGPKAQHAPAFLGIPETNFYCLRSFVDRRSGETAHQLYVTDSYFGAERGWNAARDSTGAMLPFVAIGHDE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084952

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences