Metagenome / Metatranscriptome Family F084874

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

Select file to download:
Download

Overview

Basic Information
Family ID	F084874
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	57 residues
Representative Sequence	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA
Number of Associated Samples	73
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	58.93 %
% of genes near scaffold ends (potentially truncated)	52.68 %
% of genes from short scaffolds (< 2000 bps)	81.25 %
Associated GOLD sequencing projects	64
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.35

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


Click on a Sequence Logo column to get its information.
Powered by Skylign

Most Common Taxonomy
Group	Bacteria (45.536 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh (30.357 % of family members)
Environment Ontology (ENVO)	Unclassified (32.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (78.571 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

Powered by MSAViewer

Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

Powered by MSAViewer

AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

Powered by MSAViewer

Select alignment to view:

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.41% β-sheet: 16.47% Coil/Unstructured: 74.12%
Feature Viewer

Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.35
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.35
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00210	Ferritin	6.25
PF06941	NT5C	2.68
PF00474	SSF	1.79
PF00080	Sod_Cu	1.79
PF08752	COP-gamma_platf	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	2.68
COG2032	Cu/Zn superoxide dismutase	Inorganic ion transport and metabolism [P]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	64.29 %
Unclassified	root	N/A	35.71 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	47.32 %
Unclassified	root	N/A	35.71 %
Viruses	superkingdom	All Organisms → Viruses	16.96 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	45.54 %
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	5.36 %
Euryarchaeota	phylum	All Organisms → cellular organisms → Archaea → Euryarchaeota	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	5.36 %
unclassified Euryarchaeota	no rank	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Cryomorphaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
unclassified Cryomorphaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	16.96 %
Cryomorphaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	5.36 %
Euryarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1.79 %

Visualization

Powered by ApexCharts

Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2222084003\|2222368930	Not Available	505	Open in IMG/M
2222084010\|2225748423	Not Available	804	Open in IMG/M
3300001419\|JGI11705J14877_10032638	All Organisms → cellular organisms → Bacteria	1956	Open in IMG/M
3300001419\|JGI11705J14877_10075241	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300001419\|JGI11705J14877_10107774	Not Available	809	Open in IMG/M
3300001419\|JGI11705J14877_10122285	All Organisms → cellular organisms → Bacteria	736	Open in IMG/M
3300001748\|JGI11772J19994_1024786	All Organisms → cellular organisms → Bacteria	834	Open in IMG/M
3300001948\|GOS2228_1024900	Not Available	1358	Open in IMG/M
3300001948\|GOS2228_1039555	All Organisms → Viruses → Predicted Viral	1967	Open in IMG/M
3300001963\|GOS2229_1043153	Not Available	1170	Open in IMG/M
3300004097\|Ga0055584_100104515	All Organisms → Viruses → Predicted Viral	2824	Open in IMG/M
3300005430\|Ga0066849_10142332	All Organisms → cellular organisms → Bacteria	946	Open in IMG/M
3300005512\|Ga0074648_1007469	All Organisms → cellular organisms → Bacteria	7850	Open in IMG/M
3300005512\|Ga0074648_1014639	All Organisms → Viruses → Predicted Viral	4805	Open in IMG/M
3300005512\|Ga0074648_1042732	All Organisms → Viruses → Predicted Viral	2077	Open in IMG/M
3300005512\|Ga0074648_1087090	All Organisms → Viruses → Predicted Viral	1147	Open in IMG/M
3300005512\|Ga0074648_1138759	Not Available	761	Open in IMG/M
3300005512\|Ga0074648_1165577	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300005512\|Ga0074648_1167655	Not Available	644	Open in IMG/M
3300005512\|Ga0074648_1169199	Not Available	639	Open in IMG/M
3300005512\|Ga0074648_1172831	Not Available	628	Open in IMG/M
3300005512\|Ga0074648_1174555	Not Available	623	Open in IMG/M
3300005514\|Ga0066866_10095502	All Organisms → cellular organisms → Bacteria	1091	Open in IMG/M
3300006025\|Ga0075474_10209462	All Organisms → cellular organisms → Bacteria	595	Open in IMG/M
3300006027\|Ga0075462_10127773	Not Available	783	Open in IMG/M
3300006802\|Ga0070749_10303380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	895	Open in IMG/M
3300006802\|Ga0070749_10770167	Not Available	512	Open in IMG/M
3300006802\|Ga0070749_10773598	Not Available	510	Open in IMG/M
3300006919\|Ga0070746_10037383	All Organisms → cellular organisms → Bacteria	2581	Open in IMG/M
3300006919\|Ga0070746_10060058	Not Available	1963	Open in IMG/M
3300006919\|Ga0070746_10360380	All Organisms → cellular organisms → Bacteria	658	Open in IMG/M
3300007538\|Ga0099851_1267194	Not Available	609	Open in IMG/M
3300007539\|Ga0099849_1146232	Not Available	916	Open in IMG/M
3300007542\|Ga0099846_1178902	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300007609\|Ga0102945_1066319	All Organisms → cellular organisms → Bacteria	681	Open in IMG/M
3300007960\|Ga0099850_1023589	All Organisms → Viruses → Predicted Viral	2717	Open in IMG/M
3300008012\|Ga0075480_10498834	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300009000\|Ga0102960_1056047	All Organisms → cellular organisms → Bacteria	1450	Open in IMG/M
3300009000\|Ga0102960_1102023	All Organisms → Viruses → Predicted Viral	1044	Open in IMG/M
3300009124\|Ga0118687_10361546	Not Available	556	Open in IMG/M
3300010300\|Ga0129351_1234506	All Organisms → cellular organisms → Bacteria	705	Open in IMG/M
3300010316\|Ga0136655_1078339	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300010318\|Ga0136656_1070138	All Organisms → Viruses → Predicted Viral	1247	Open in IMG/M
3300010318\|Ga0136656_1210290	Not Available	649	Open in IMG/M
3300010368\|Ga0129324_10354254	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300016739\|Ga0182076_1295579	All Organisms → cellular organisms → Bacteria	802	Open in IMG/M
3300016747\|Ga0182078_10657949	All Organisms → cellular organisms → Bacteria	594	Open in IMG/M
3300017818\|Ga0181565_10019987	All Organisms → cellular organisms → Bacteria	4982	Open in IMG/M
3300017818\|Ga0181565_10050750	Not Available	2999	Open in IMG/M
3300017824\|Ga0181552_10119917	All Organisms → cellular organisms → Bacteria	1434	Open in IMG/M
3300017949\|Ga0181584_10044703	All Organisms → Viruses → Predicted Viral	3154	Open in IMG/M
3300017949\|Ga0181584_10253402	All Organisms → Viruses → Predicted Viral	1140	Open in IMG/M
3300017951\|Ga0181577_10003945	Not Available	11498	Open in IMG/M
3300017956\|Ga0181580_10114895	Not Available	1958	Open in IMG/M
3300017956\|Ga0181580_10364613	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300017958\|Ga0181582_10047699	Not Available	3261	Open in IMG/M
3300017958\|Ga0181582_10114128	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1930	Open in IMG/M
3300017958\|Ga0181582_10699459	All Organisms → cellular organisms → Bacteria	610	Open in IMG/M
3300017964\|Ga0181589_10603339	All Organisms → cellular organisms → Bacteria	698	Open in IMG/M
3300017967\|Ga0181590_10891702	All Organisms → cellular organisms → Bacteria	586	Open in IMG/M
3300017967\|Ga0181590_10967930	Not Available	556	Open in IMG/M
3300017968\|Ga0181587_10168609	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1534	Open in IMG/M
3300017969\|Ga0181585_10413614	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	918	Open in IMG/M
3300018039\|Ga0181579_10110952	All Organisms → cellular organisms → Archaea → Euryarchaeota → unclassified Euryarchaeota → Euryarchaeota archaeon	1705	Open in IMG/M
3300018413\|Ga0181560_10157625	All Organisms → cellular organisms → Bacteria	1140	Open in IMG/M
3300018413\|Ga0181560_10278979	All Organisms → cellular organisms → Bacteria	787	Open in IMG/M
3300018421\|Ga0181592_10471317	Not Available	873	Open in IMG/M
3300018421\|Ga0181592_10820248	Not Available	611	Open in IMG/M
3300018423\|Ga0181593_10902543	All Organisms → cellular organisms → Bacteria	612	Open in IMG/M
3300018428\|Ga0181568_10317291	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1268	Open in IMG/M
3300018876\|Ga0181564_10510256	All Organisms → cellular organisms → Bacteria	644	Open in IMG/M
3300019274\|Ga0182073_1222884	All Organisms → cellular organisms → Bacteria	642	Open in IMG/M
3300019756\|Ga0194023_1015597	All Organisms → cellular organisms → Bacteria	1534	Open in IMG/M
3300020054\|Ga0181594_10469910	Not Available	516	Open in IMG/M
3300020056\|Ga0181574_10010359	All Organisms → cellular organisms → Bacteria	7477	Open in IMG/M
3300020189\|Ga0181578_10495736	Not Available	508	Open in IMG/M
3300020440\|Ga0211518_10055790	All Organisms → cellular organisms → Bacteria	2240	Open in IMG/M
3300020445\|Ga0211564_10411985	Not Available	663	Open in IMG/M
3300020470\|Ga0211543_10081923	All Organisms → cellular organisms → Bacteria	1663	Open in IMG/M
3300020471\|Ga0211614_10445289	Not Available	574	Open in IMG/M
3300020478\|Ga0211503_10000739	Not Available	30040	Open in IMG/M
3300021425\|Ga0213866_10509413	All Organisms → cellular organisms → Bacteria	573	Open in IMG/M
3300021958\|Ga0222718_10458606	All Organisms → cellular organisms → Bacteria	625	Open in IMG/M
3300021958\|Ga0222718_10463431	Not Available	620	Open in IMG/M
3300021959\|Ga0222716_10370605	Not Available	841	Open in IMG/M
3300021959\|Ga0222716_10598698	All Organisms → cellular organisms → Bacteria	602	Open in IMG/M
3300021960\|Ga0222715_10029696	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	3950	Open in IMG/M
3300021960\|Ga0222715_10050026	Not Available	2891	Open in IMG/M
3300021960\|Ga0222715_10278308	Not Available	960	Open in IMG/M
3300021964\|Ga0222719_10010777	All Organisms → cellular organisms → Bacteria	7557	Open in IMG/M
3300021964\|Ga0222719_10027100	All Organisms → Viruses → Predicted Viral	4525	Open in IMG/M
3300021964\|Ga0222719_10087674	All Organisms → Viruses → Predicted Viral	2293	Open in IMG/M
3300021964\|Ga0222719_10188570	All Organisms → Viruses → Predicted Viral	1421	Open in IMG/M
3300021964\|Ga0222719_10217837	All Organisms → Viruses → Predicted Viral	1292	Open in IMG/M
3300021964\|Ga0222719_10674465	All Organisms → cellular organisms → Bacteria	588	Open in IMG/M
3300021964\|Ga0222719_10787884	Not Available	524	Open in IMG/M
3300022183\|Ga0196891_1075192	All Organisms → cellular organisms → Bacteria	601	Open in IMG/M
3300022198\|Ga0196905_1111541	All Organisms → cellular organisms → Bacteria	723	Open in IMG/M
3300022198\|Ga0196905_1123705	Not Available	677	Open in IMG/M
3300022200\|Ga0196901_1249861	Not Available	550	Open in IMG/M
3300022905\|Ga0255756_1101137	All Organisms → Viruses → Predicted Viral	1304	Open in IMG/M
3300022921\|Ga0255765_1098666	All Organisms → Viruses → Predicted Viral	1518	Open in IMG/M
3300023081\|Ga0255764_10331696	Not Available	684	Open in IMG/M
3300023173\|Ga0255776_10438312	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300025687\|Ga0208019_1022288	All Organisms → Viruses → Predicted Viral	2462	Open in IMG/M
3300025769\|Ga0208767_1155130	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	828	Open in IMG/M
3300025771\|Ga0208427_1265643	Not Available	523	Open in IMG/M
3300025803\|Ga0208425_1012158	All Organisms → cellular organisms → Bacteria	2370	Open in IMG/M
3300026097\|Ga0209953_1049591	All Organisms → cellular organisms → Bacteria	585	Open in IMG/M
3300026138\|Ga0209951_1049845	All Organisms → cellular organisms → Bacteria	899	Open in IMG/M
3300026183\|Ga0209932_1037548	All Organisms → Viruses → Predicted Viral	1205	Open in IMG/M
3300026183\|Ga0209932_1098448	Not Available	648	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	78.57%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	19.64%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	33.04%
Coastal	Environmental → Aquatic → Marine → Coastal	24.11%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	19.64%
Unclassified	Environmental → Aquatic → Marine → Unclassified	17.86%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.68%
River	Environmental → Aquatic → Freshwater → River	0.89%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	30.36%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	24.11%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	17.86%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	9.82%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	6.25%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	3.57%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	0.89%
Oil-Contaminated	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated	0.89%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	30.36%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	18.75%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	12.50%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	9.82%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	6.25%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	4.46%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	4.46%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	3.57%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	2.68%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	1.79%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	0.89%
Marine	Environmental → Aquatic → Marine → Oceanic → Oil-Contaminated → Marine	0.89%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	0.89%
Coastal Lagoon	Environmental → Aquatic → Marine → Unclassified → Unclassified → Coastal Lagoon	0.89%
Pelagic Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Pelagic Marine	0.89%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.89%

Visualization

Powered by ApexCharts

Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2222084003	Marine microbial communities from Deepwater Horizon oil blowout, Alabama, USA - Ctl_5_microcosm	Environmental	Open in IMG/M
2222084010	Coastal lagoon microbial communities from Mar Menor, Spain - Sample 1	Environmental	Open in IMG/M
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001748	Saline surface water microbial communities from Etoliko Lagoon, Greece - surface water (0 m)	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300001963	Marine microbial communities from Nags Head, North Carolina, USA - GS013	Environmental	Open in IMG/M
3300004097	Pelagic marine sediment microbial communities from the LTER site Helgoland, North Sea, for post-phytoplankton bloom and carbon turnover studies - OSD3 (Helgoland) metaG	Environmental	Open in IMG/M
3300005430	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV69	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005514	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP2014F12-01SV263	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006027	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007542	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG	Environmental	Open in IMG/M
3300007609	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008012	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_<0.8_DNA	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010316	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.8_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300016739	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071408BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016747	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071409BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017818	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101401AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017824	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017951	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101413BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017969	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018039	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071402CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018423	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018428	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018876	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011513CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019274	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071405CT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020054	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413BT metaG (spades assembly)	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020189	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071401CT metaG (spades assembly)	Environmental	Open in IMG/M
3300020440	Marine microbial communities from Tara Oceans - TARA_E500000178 (ERX555952-ERR599043)	Environmental	Open in IMG/M
3300020445	Marine microbial communities from Tara Oceans - TARA_B100001996 (ERX555961-ERR599087)	Environmental	Open in IMG/M
3300020470	Marine microbial communities from Tara Oceans - TARA_B100000287 (ERX555976-ERR599053)	Environmental	Open in IMG/M
3300020471	Marine microbial communities from Tara Oceans - TARA_B100000214 (ERX556063-ERR599002)	Environmental	Open in IMG/M
3300020478	Marine microbial communities from Tara Oceans - TARA_B100000029 (ERX556025-ERR599111)	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022183	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24 (v3)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022905	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG	Environmental	Open in IMG/M
3300022921	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 041407BS metaG	Environmental	Open in IMG/M
3300023081	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025769	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21 (SPAdes)	Environmental	Open in IMG/M
3300025771	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026097	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG R2_restored_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

Zoom:	Powered by OpenStreetMap

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2222429593	2222084003	Marine	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRC
2225148588	2222084010	Coastal Lagoon	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCXQCRCEACEA
JGI11705J14877_100326383	3300001419	Saline Water And Sediment	MSTLVLENEWAVMCKNCGCDSHCDTTCRRHEKHYPIDGYMEYPVEVCKQCRCEACEA*
JGI11705J14877_100752412	3300001419	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPVEVCXQCRCEACEA*
JGI11705J14877_101077741	3300001419	Saline Water And Sediment	METFTVSTLLLKNEWACTCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEV
JGI11705J14877_101222852	3300001419	Saline Water And Sediment	EIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCKQCRCEACEA*
JGI11772J19994_10247861	3300001748	Saline Water And Sediment	PHGRTIGQEIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA*
GOS2228_10249001	3300001948	Marine	METFTAATLMLEKDWEIKCKNCGCDSHCGKTCDRKEKHYPIDGYFEYDIEVCKQCRCEACEA*
GOS2228_10395551	3300001948	Marine	RTRIIRCEPHGRTLGEKIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA*
GOS2229_10431532	3300001963	Marine	MMSTLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEY
Ga0055584_1001045152	3300004097	Pelagic Marine	MTVLVLENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPIEVCRQCRCEACAA*
Ga0066849_101423322	3300005430	Marine	MESELFVLKKDWVIKCQNCGCDSHCGETCKRKQNHYPVDGYFEYEIEVCKQCRCEAC*
Ga0074648_100746917	3300005512	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVE
Ga0074648_10146392	3300005512	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA*
Ga0074648_10427323	3300005512	Saline Water And Sediment	MMSTLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCKQCRCEACEA*
Ga0074648_10870902	3300005512	Saline Water And Sediment	MSTLVLKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYFEYDIEVCKQCRCDACEA*
Ga0074648_11387593	3300005512	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCKQCRCEACEA*
Ga0074648_11655772	3300005512	Saline Water And Sediment	EVLPIMETFSVATLLLENEWACTCKNCGCDSHCDTTCKRTERHYPIDGYMEYPVEVCRQCRCEACQA*
Ga0074648_11676552	3300005512	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCRQCRCEACEA*
Ga0074648_11691993	3300005512	Saline Water And Sediment	MTALVLENDWAVMCKNCGCDSHCDTTCNRTEKHYPIDGYMEYPIEVCKQCRRS
Ga0074648_11728311	3300005512	Saline Water And Sediment	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCRQCR
Ga0074648_11745552	3300005512	Saline Water And Sediment	MTVLVLENDWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA*
Ga0066866_100955022	3300005514	Marine	MSTLVLEKDWIVKCKNCGCDSHCDETCKRKENHYPIDGYFEYEIEVCKQCRCEACI*
Ga0075474_102094621	3300006025	Aqueous	EDVPIMETFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPIDGYMEYPIEVCKQCRCEACQA*
Ga0075462_101277732	3300006027	Aqueous	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTEKHYPIDGYMEYPVEVCRQCRCEACEA*
Ga0070749_103033803	3300006802	Aqueous	LVLDNEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPVEVCKQCRCEACQA*
Ga0070749_107701673	3300006802	Aqueous	MSTLVLKEEWSVKCTNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQ
Ga0070749_107735982	3300006802	Aqueous	METFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPIDGYMEYPIEVCKQCRCEACQA*
Ga0070746_100373833	3300006919	Aqueous	MTVLVLENDWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA*
Ga0070746_100600581	3300006919	Aqueous	MSTLILKKEWTVKCQNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQ
Ga0070746_103603801	3300006919	Aqueous	PHGRTTGQEIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA*
Ga0099851_12671942	3300007538	Aqueous	MMSTLILENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPLEVCRQCRCEACEA*
Ga0099849_11462323	3300007539	Aqueous	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPV
Ga0099846_11789023	3300007542	Aqueous	LVLENEWAVMCKNCGCDSHCDTKCTRTERHYPIDGYMEYPIEVCRQCRCEACEA*
Ga0102945_10663191	3300007609	Pond Water	IMTVLVLENEWAVMCKNCGCDSNCDTTCTRTERHYPIDGYMEYPVEVCKQCRCEACEA*
Ga0099850_10235891	3300007960	Aqueous	TLILENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPVEVCKQCRCEACEA*
Ga0075480_104988341	3300008012	Aqueous	TIGQEIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACQA*
Ga0102960_10560473	3300009000	Pond Water	MTVLVLENDWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCRQCRCEACEA*
Ga0102960_11020233	3300009000	Pond Water	EEVIPIMETFTAATLMLEKDWEVKCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACAA*
Ga0118687_103615461	3300009124	Sediment	MNTLVLKNEWTVKCNNCGCDSHCDTTCNRTERHYPIDGYFEYDIEVCPQCR
Ga0129351_12345062	3300010300	Freshwater To Marine Saline Gradient	MMSTLILENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPIEVCRQCRCEACEA*
Ga0136655_10783392	3300010316	Freshwater To Marine Saline Gradient	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA*
Ga0136656_10701382	3300010318	Freshwater To Marine Saline Gradient	MNVLVLENDWAVMCKNCGCDSHCDTTCNRTEKHYPIDGYMEYPIEVCKQCRCEACEA*
Ga0136656_12102903	3300010318	Freshwater To Marine Saline Gradient	METFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPTDGYMEYPIEVCKQCRCEACSA*
Ga0129324_103542542	3300010368	Freshwater To Marine Saline Gradient	LVLENEWAVMCKNCGCDSHCDTTCTRTERHYSIDGYMEYPIEVCRQCRCEACQA*
Ga0182076_12955791	3300016739	Salt Marsh	HGRTLGQKIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0182078_106579491	3300016747	Salt Marsh	GREPHGRTLGQEIMDTLVLKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYFEYDIEVCKQCRCDACEA
Ga0181565_100199879	3300017818	Salt Marsh	MDTLILKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYYEYDIEVCKQCRCDACEA
Ga0181565_100507507	3300017818	Salt Marsh	MSTLVLKEEWVVKCNNCGCDSHCGKECRRKEKHYPIDGYFEYDIEVCKQCRCEACEA
Ga0181552_101199173	3300017824	Salt Marsh	METFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0181584_100447034	3300017949	Salt Marsh	MDTLILKEEWAVKCNNCGCDSHCGKECKRKEKHYPIDGYYEYDIEVCRQCRCEACEA
Ga0181584_102534022	3300017949	Salt Marsh	MDTLVLKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYFEYDIEVCKQCRCDACEA
Ga0181577_100039457	3300017951	Salt Marsh	MSTLVLKEEWVVKCNNCGCDSHCGKECRRKEKHYPTDGYMEYPIEVCKQCRCEACQ
Ga0181580_101148956	3300017956	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCGKECKRKEKHYPIDGYFE
Ga0181580_103646131	3300017956	Salt Marsh	TQPTGREPHGRTGDKEDVPIMETFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0181582_100476997	3300017958	Salt Marsh	MSTLVLKEEWAVKCNNCGCDSHCGKECRRKEKHYPIDGYFEYDIEVCKQCRCEACQA
Ga0181582_101141281	3300017958	Salt Marsh	MTVLVLENECAVMCNNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVC
Ga0181582_106994591	3300017958	Salt Marsh	TGQEIMTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA
Ga0181589_106033392	3300017964	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA
Ga0181590_108917022	3300017967	Salt Marsh	DKEDVPIMETFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPTDGYMEYPIEVCKQCRCEACQA
Ga0181590_109679302	3300017967	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCGKECKRKEKHYPINGYFEYDIEVCKQCRCDACEA
Ga0181587_101686091	3300017968	Salt Marsh	TGREPHGRTGDKEDVPIMETFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPTDGYMEYPIEVCKQCRCEACQA
Ga0181585_104136141	3300017969	Salt Marsh	VLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCETCEA
Ga0181579_101109525	3300018039	Salt Marsh	MDTLVLKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYFEYDIEVCKQCRC
Ga0181560_101576252	3300018413	Salt Marsh	MDTLILKEEWAVKCNNCGCDSHCGKECKRKEKHYPIDGYYEYDIEVCKQCRCDACEA
Ga0181560_102789792	3300018413	Salt Marsh	MDTLVLKEEWAVKCKNCGCDSHCGKECRRKEKHYPIDGYFEYDIEVCKQCRCEACIA
Ga0181592_104713171	3300018421	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCGKECRRKEKHYPIDGYFEYDIEVC
Ga0181592_108202482	3300018421	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPIEVCKQCR
Ga0181593_109025432	3300018423	Salt Marsh	MSTLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEV
Ga0181568_103172911	3300018428	Salt Marsh	MDTLVLKEEWAVKCKNCGCDSHCGKECRRKEKHYPIDGYFEYDIEVCKQ
Ga0181564_105102561	3300018876	Salt Marsh	PNGRTTGQEIMDTLILKEEWAVKCKNCGCDSHCGKECKRKEKHYPIDGYYEYDIEVCKQCRCDACEA
Ga0182073_12228842	3300019274	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0194023_10155973	3300019756	Freshwater	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACQA
Ga0181594_104699101	3300020054	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPMDGYMEYPIEVCKQCRCE
Ga0181574_1001035914	3300020056	Salt Marsh	MSTLVLKEEWVVKCNNCGCDSHCGKECRRKEKHYPTDGYMEYPIEVCK
Ga0181578_104957361	3300020189	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCR
Ga0211518_100557905	3300020440	Marine	MEPLVLTEEVMCKNCGCGSHCGKECKRKEKHYPIDGYFEYEIEVCKQCRCEACEA
Ga0211564_104119853	3300020445	Marine	MESELFVLKKDWVIKCQNCGCDSHCGETCKRKQNHYPVDGYFEYEIEVCKQ
Ga0211543_100819233	3300020470	Marine	MTTLVLEKDWIIKCQNCGCDSHCGETCKRKQNHYPVDGYFEYEIEVCKQCRCEAC
Ga0211614_104452893	3300020471	Marine	MDTLILKEEWAIKCLNCGCDSHCGKTCRRKEKFYPVDGSNEYDIEVC
Ga0211503_1000073911	3300020478	Marine	MESELFVLKKDWVIKCQNCGCDSHCGETCKRKQNHYPVDGYFEYEIEVCKQCRCEAC
Ga0213866_105094132	3300021425	Seawater	ATLMLEKDWACTCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0222718_104586061	3300021958	Estuarine Water	TLGQEIMTVLVLENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPVEVCRQCRCEACQA
Ga0222718_104634312	3300021958	Estuarine Water	MTVLVLENDWAVMCKNCGCDAHCDTTCTRMERHYPIDGYMEYPIEVCRQCRCEACEA
Ga0222716_103706053	3300021959	Estuarine Water	MTVLVLENQWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYP
Ga0222716_105986982	3300021959	Estuarine Water	PTGRELNGWTFGEKIMSTLVLKEEWAIKCKNCGCDSHCGKECRRKEKHYPVDGYFEYDIEVCRQCRCDACQA
Ga0222715_100296965	3300021960	Estuarine Water	METFTVATLMLEKDWEVKCKNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQCRCEACAA
Ga0222715_100500267	3300021960	Estuarine Water	MMSTLVLENEWAVMCKNCGCDSHCGETCNRKENHYPIDGYFEYDIEVCKQCRCEACQA
Ga0222715_102783081	3300021960	Estuarine Water	METFTAATLMLEKDWEVKCKNCGCDSHCGETCNRKERHYPIDGYFEYDIEVCKQCRCEACQA
Ga0222719_100107771	3300021964	Estuarine Water	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEY
Ga0222719_100271008	3300021964	Estuarine Water	MSTLVLENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACQA
Ga0222719_100876741	3300021964	Estuarine Water	HGRTHGQEMTSTLILENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCRQCRCEACEA
Ga0222719_101885701	3300021964	Estuarine Water	ENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYFEYDIEVCKQCRCEACEA
Ga0222719_102178373	3300021964	Estuarine Water	MMSTLLLENEWAVMCKNCGCDSHCGETCNRKENHYPIDGYFEYDIEVCKQCRCEACQA
Ga0222719_106744651	3300021964	Estuarine Water	ENEWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCKQCRCEACQA
Ga0222719_107878841	3300021964	Estuarine Water	METFTAATLMLEKDWEVKCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACAA
Ga0196891_10751923	3300022183	Aqueous	LVLENEWAVMCKNCGCDSHCDTTCTRTEKHYPIDGYMEYPVEVCRQCRCEACEA
Ga0196905_11115412	3300022198	Aqueous	METFTAATLMLEKDWEIKCKNCGCDSHCGKTCDRKEKHYPIDGYFEYDIEVCKQCRCEACQA
Ga0196905_11237051	3300022198	Aqueous	MTVLVLENEWALMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIE
Ga0196901_12498612	3300022200	Aqueous	MSTLILENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPIEVCRQCRCEACEA
Ga0255756_11011371	3300022905	Salt Marsh	RWTRHQEIMDTLILKEEWAVKCNNCGCDSHCGKECKRKEKHYPIDGYYEYDIEVCKQCRCDACEA
Ga0255765_10986661	3300022921	Salt Marsh	HGWTIGKEIMDDVLLLNEEWIIKCTNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQCRCEACAA
Ga0255764_103316962	3300023081	Salt Marsh	MTVLVLENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0255776_104383121	3300023173	Salt Marsh	MTVLVLENEWAVICKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCRQCRCEACEA
Ga0208019_10222881	3300025687	Aqueous	ILENEWAVMCKNCGCDSHCDTTCNRTERHYPIDGYMEYPVEVCKQCRCEACEA
Ga0208767_11551303	3300025769	Aqueous	EPHGRTPGQEIMTVLVLENDWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACEA
Ga0208427_12656431	3300025771	Aqueous	GKPFWWTSDQEELSIMSTLILKKEWTVKCQNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQCRCEACAA
Ga0208425_10121582	3300025803	Aqueous	MTVLVLENEWAVMCKNCGCDSHCDTTCTRTEKHYPIDGYMEYPVEVCRQCRCEACEA
Ga0209953_10495911	3300026097	Pond Water	AVMCKNCGCDSHCDTTCRRHEKHYPIDGYMEYPIEVCRQCRCEACKA
Ga0209951_10498451	3300026138	Pond Water	IERCQPVWWTSGEEIMEPLILTDPIKCTNCGCDSHCGKTCTRKEQHYPTDGYMEYPIEVCKQCRCEACAA
Ga0209932_10375483	3300026183	Pond Water	MTVLVLENDWAVMCKNCGCDSHCDTTCTRTERHYPIDGYMEYPVEVCRQCRCEACEA
Ga0209932_10984481	3300026183	Pond Water	DWEVKCKNCGCDSHCDTTCTRTERHYPIDGYMEYPIEVCKQCRCEACAA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084874

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences