NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F084804

Metagenome / Metatranscriptome Family F084804

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084804
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 81 residues
Representative Sequence VLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Number of Associated Samples 81
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 6.25 %
% of genes near scaffold ends (potentially truncated) 29.46 %
% of genes from short scaffolds (< 2000 bps) 79.46 %
Associated GOLD sequencing projects 70
AlphaFold2 3D model prediction Yes
3D model pTM-score0.78

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (73.214 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(20.536 % of family members)
Environment Ontology (ENVO) Unclassified
(28.571 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(56.250 % of family members)



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Multiple Sequence Alignments

Select alignment to view:      


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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 13.64%    β-sheet: 32.73%    Coil/Unstructured: 53.64%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.78
Powered by PDBe Molstar

Structural matches with SCOPe domains

SCOP familySCOP domainRepresentative PDBTM-score
b.124.1.1: HesB-like domaind1nwba_1nwb0.70751
b.124.1.0: automated matchesd2apna_2apn0.70081
b.124.1.0: automated matchesd2d2aa_2d2a0.67281
b.124.1.1: HesB-like domaind1r94a_1r940.65173
b.124.1.0: automated matchesd1x0ga_1x0g0.60669


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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF01258zf-dskA_traR 27.68
PF11706zf-CGNR 7.14
PF12847Methyltransf_18 6.25
PF05977MFS_3 5.36
PF13649Methyltransf_25 4.46
PF00202Aminotran_3 3.57
PF05724TPMT 1.79
PF07336ABATE 1.79
PF02080TrkA_C 0.89
PF00171Aldedh 0.89
PF02786CPSase_L_D2 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1734RNA polymerase-binding transcription factor DksATranscription [K] 27.68
COG2814Predicted arabinose efflux permease AraJ, MFS familyCarbohydrate transport and metabolism [G] 5.36
COG5516Uncharacterized conserved protein containing a Zn-ribbon-like motif, possibly RNA-bindingGeneral function prediction only [R] 1.79
COG0014Gamma-glutamyl phosphate reductaseAmino acid transport and metabolism [E] 0.89
COG1012Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenaseLipid transport and metabolism [I] 0.89
COG4230Delta 1-pyrroline-5-carboxylate dehydrogenaseAmino acid transport and metabolism [E] 0.89


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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms73.21 %
UnclassifiedrootN/A26.79 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300001686|C688J18823_10091729All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2109Open in IMG/M
3300002568|C688J35102_120977628All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4377Open in IMG/M
3300004081|Ga0063454_100000279All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6406Open in IMG/M
3300004081|Ga0063454_100019517All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium2110Open in IMG/M
3300004114|Ga0062593_100030028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3075Open in IMG/M
3300004114|Ga0062593_101224433Not Available789Open in IMG/M
3300004114|Ga0062593_102371285All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300004153|Ga0063455_100611174Not Available712Open in IMG/M
3300004479|Ga0062595_100625359All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium845Open in IMG/M
3300004479|Ga0062595_102035707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria556Open in IMG/M
3300005328|Ga0070676_10411795All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales943Open in IMG/M
3300005328|Ga0070676_10645720All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales767Open in IMG/M
3300005328|Ga0070676_11547433Not Available511Open in IMG/M
3300005330|Ga0070690_100105464All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1873Open in IMG/M
3300005332|Ga0066388_103026465All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300005334|Ga0068869_100049452All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3043Open in IMG/M
3300005334|Ga0068869_100147229All Organisms → cellular organisms → Bacteria1823Open in IMG/M
3300005336|Ga0070680_100015568All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5967Open in IMG/M
3300005340|Ga0070689_101652101Not Available582Open in IMG/M
3300005434|Ga0070709_10471706All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales949Open in IMG/M
3300005439|Ga0070711_100051849All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2820Open in IMG/M
3300005441|Ga0070700_100021381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia3760Open in IMG/M
3300005444|Ga0070694_101650142Not Available545Open in IMG/M
3300005455|Ga0070663_100715519All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales852Open in IMG/M
3300005587|Ga0066654_10029110All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2286Open in IMG/M
3300005718|Ga0068866_10404496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria881Open in IMG/M
3300005764|Ga0066903_101796799All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1171Open in IMG/M
3300005842|Ga0068858_100519838All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales1151Open in IMG/M
3300005985|Ga0081539_10038270All Organisms → cellular organisms → Bacteria2845Open in IMG/M
3300006163|Ga0070715_10044393All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1879Open in IMG/M
3300006163|Ga0070715_10098987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1356Open in IMG/M
3300006173|Ga0070716_101233490Not Available602Open in IMG/M
3300006175|Ga0070712_100053169All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia2827Open in IMG/M
3300006175|Ga0070712_100774755All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales822Open in IMG/M
3300006794|Ga0066658_10239193All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium969Open in IMG/M
3300006854|Ga0075425_102404623Not Available584Open in IMG/M
3300007076|Ga0075435_101601204Not Available571Open in IMG/M
3300009094|Ga0111539_11641780All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria745Open in IMG/M
3300009098|Ga0105245_10019352All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia5961Open in IMG/M
3300009098|Ga0105245_10029693All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia4833Open in IMG/M
3300009098|Ga0105245_12862457Not Available535Open in IMG/M
3300009101|Ga0105247_11216934Not Available600Open in IMG/M
3300009551|Ga0105238_12523604Not Available550Open in IMG/M
3300010375|Ga0105239_10728707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1134Open in IMG/M
3300010375|Ga0105239_11855686Not Available699Open in IMG/M
3300010399|Ga0134127_10012420All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia6373Open in IMG/M
3300010399|Ga0134127_10757131All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1016Open in IMG/M
3300010400|Ga0134122_10076717All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2606Open in IMG/M
3300010401|Ga0134121_11062434All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria799Open in IMG/M
3300010403|Ga0134123_10236590All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1580Open in IMG/M
3300012469|Ga0150984_109379124Not Available531Open in IMG/M
3300012469|Ga0150984_113690237All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1173Open in IMG/M
3300012469|Ga0150984_115501725All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1037Open in IMG/M
3300012469|Ga0150984_116555367All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1273Open in IMG/M
3300012897|Ga0157285_10273531All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria564Open in IMG/M
3300012897|Ga0157285_10369303All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300012908|Ga0157286_10226892All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria645Open in IMG/M
3300012913|Ga0157298_10231770All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria614Open in IMG/M
3300012915|Ga0157302_10058187All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1114Open in IMG/M
3300012951|Ga0164300_10146198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1102Open in IMG/M
3300012958|Ga0164299_10032667All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2278Open in IMG/M
3300012958|Ga0164299_10452168Not Available841Open in IMG/M
3300012958|Ga0164299_10857526Not Available654Open in IMG/M
3300012961|Ga0164302_10567809All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria816Open in IMG/M
3300012961|Ga0164302_11812647Not Available516Open in IMG/M
3300012984|Ga0164309_10142381All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1582Open in IMG/M
3300012986|Ga0164304_10240459All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1207Open in IMG/M
3300012986|Ga0164304_11868474Not Available503Open in IMG/M
3300012987|Ga0164307_11444602All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria581Open in IMG/M
3300012989|Ga0164305_10479477All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria973Open in IMG/M
3300012989|Ga0164305_11283694All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria639Open in IMG/M
3300013296|Ga0157374_11934412Not Available616Open in IMG/M
3300015371|Ga0132258_10380295All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3501Open in IMG/M
3300015371|Ga0132258_13538655All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1069Open in IMG/M
3300015372|Ga0132256_100421649All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1438Open in IMG/M
3300015373|Ga0132257_100952944All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1078Open in IMG/M
3300015373|Ga0132257_103866062All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria545Open in IMG/M
3300015374|Ga0132255_103443667Not Available673Open in IMG/M
3300017792|Ga0163161_10746045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium819Open in IMG/M
3300017792|Ga0163161_10985625All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria719Open in IMG/M
3300018466|Ga0190268_10500227All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria825Open in IMG/M
3300019361|Ga0173482_10119195All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria985Open in IMG/M
3300019362|Ga0173479_10516259Not Available606Open in IMG/M
3300019362|Ga0173479_10798394Not Available522Open in IMG/M
3300020080|Ga0206350_11366684All Organisms → cellular organisms → Bacteria612Open in IMG/M
3300021445|Ga0182009_10487452Not Available648Open in IMG/M
3300023066|Ga0247793_1046478Not Available687Open in IMG/M
3300024055|Ga0247794_10144149Not Available740Open in IMG/M
3300024245|Ga0247677_1022707All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium897Open in IMG/M
3300025899|Ga0207642_10087436All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1530Open in IMG/M
3300025899|Ga0207642_10934137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria557Open in IMG/M
3300025907|Ga0207645_10070353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2238Open in IMG/M
3300025907|Ga0207645_10598281All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria749Open in IMG/M
3300025915|Ga0207693_10025043All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria4734Open in IMG/M
3300025915|Ga0207693_10218512All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1497Open in IMG/M
3300025924|Ga0207694_11125952All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria664Open in IMG/M
3300025927|Ga0207687_10076692All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2402Open in IMG/M
3300025927|Ga0207687_10388118All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1146Open in IMG/M
3300025927|Ga0207687_11576634Not Available564Open in IMG/M
3300025936|Ga0207670_11473363Not Available578Open in IMG/M
3300025938|Ga0207704_10223369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1395Open in IMG/M
3300025986|Ga0207658_11779481All Organisms → cellular organisms → Bacteria562Open in IMG/M
3300026041|Ga0207639_11289191All Organisms → cellular organisms → Bacteria → Proteobacteria686Open in IMG/M
3300026325|Ga0209152_10022645All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2148Open in IMG/M
3300027543|Ga0209999_1123446Not Available508Open in IMG/M
3300027907|Ga0207428_11142411All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria543Open in IMG/M
3300028718|Ga0307307_10058650All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1136Open in IMG/M
3300030336|Ga0247826_11552423Not Available538Open in IMG/M
3300031170|Ga0307498_10492374Not Available500Open in IMG/M
3300031740|Ga0307468_100037137All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2401Open in IMG/M
3300031938|Ga0308175_100782313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1042Open in IMG/M
3300031995|Ga0307409_102089701Not Available596Open in IMG/M



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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil20.54%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere9.82%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere5.36%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere5.36%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil4.46%
SoilEnvironmental → Terrestrial → Soil → Loam → Grasslands → Soil4.46%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere4.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere4.46%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere3.57%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.57%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere3.57%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil2.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.79%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.79%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Tabebuia Heterophylla RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Arabidopsis Thaliana RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300001686Grasslands soil microbial communities from Hopland, California, USAEnvironmentalOpen in IMG/M
3300002568Grasslands soil microbial communities from Hopland, California, USA - 2EnvironmentalOpen in IMG/M
3300004081Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)EnvironmentalOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300004153Grasslands soil microbial communities from Hopland, California, USA (version 2)EnvironmentalOpen in IMG/M
3300004479Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAsEnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005330Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005334Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2Host-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005441Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005455Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaGHost-AssociatedOpen in IMG/M
3300005587Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103EnvironmentalOpen in IMG/M
3300005718Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005985Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S4T2R2Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006175Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaGEnvironmentalOpen in IMG/M
3300006794Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107EnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009551Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaGHost-AssociatedOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012908Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S089-202R-1EnvironmentalOpen in IMG/M
3300012913Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S043-104R-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012958Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MGEnvironmentalOpen in IMG/M
3300012961Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MGEnvironmentalOpen in IMG/M
3300012984Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MGEnvironmentalOpen in IMG/M
3300012986Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300012989Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MGEnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300020080Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300023066Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S223-509R-6EnvironmentalOpen in IMG/M
3300024055Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6EnvironmentalOpen in IMG/M
3300024245Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK18EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025915Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025924Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025936Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025938Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025986Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026041Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026325Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_107 (SPAdes)EnvironmentalOpen in IMG/M
3300027543Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M1 AM (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300028718Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_194EnvironmentalOpen in IMG/M
3300030336Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1EnvironmentalOpen in IMG/M
3300031170Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_SEnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031995Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
C688J18823_1009172943300001686SoilTAGARRVAPAWASVALTGASIWRVLTFTDRAADALSTFYAAAARWDPSARLRLVRHGSELRPEFTDSVAEGEVEVAVGDITVLVPDGVDGRVDAGEHNVLTVAAG*
C688J35102_12097762833300002568SoilVLTFTDRAADALTTFHAAATRWDPSARLRLVRHGAELRPEFTDDVVEGDVEMSVGTIRVLVPSGVDGRVDAGEHNVLTVSAG*
Ga0063454_10000027923300004081SoilMVLTFTDRAADALTTFHAAATRWDPSARLRLVRHGAELRPEFTDDVVEGDVEMSVGTIRVLVPSGVDGRVDAGEHNVLTVSAG*
Ga0063454_10001951713300004081SoilVLTFTDRAADAITTFHAAAARWDPSARLRLVRHGAELRPMFADGAGDDDVEVAVGSITVWVPAGVDGRVDAGEHNVLTVSAG*
Ga0062593_10003002823300004114SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSVG*
Ga0062593_10122443323300004114SoilVLTFTDRAADALSTFHAAAARWDPSARLRLVQHGAELRPEFTDAVSDGEVEVPVGTITVLVPEGVGGTVDAGEHNVLIVSAG*
Ga0062593_10237128523300004114SoilVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPDRDDVEVALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0063455_10061117423300004153SoilVAPAWASVALTGASIWRVLTFTDRAADALSTFYAAAARWDPSARLRLVRHGSELRPEFTDSVAEGEVEVAVGDITVLVPDGVDGRVDAGEHNVLTVAAG*
Ga0062595_10062535933300004479SoilVLTFTERAADALTTFHAAAARWDPDARLRLVRDGAGLRPEFADGLTDGDVEVAVGSISVWVPAGVEGRV
Ga0062595_10203570723300004479SoilVLTFTDRAADALRTFHAAAARWNPDVRLRLVRVGTELRPELTDAAEPDDVELTLGAIDLLVPHDVDGVVDAGEHNVLTVSKA*
Ga0070676_1041179513300005328Miscanthus RhizosphereVLTFTDRAADALTAFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0070676_1064572033300005328Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVDGRVDAGEHNVLTVSAG*
Ga0070676_1154743313300005328Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0070690_10010546423300005330Switchgrass RhizosphereVLIFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0066388_10302646523300005332Tropical Forest SoilVLTFTDRAEDALTTFHAAAARWDPSARLRLVRHGAELRPEFADHAVDGDIEVAVGAITVWVPAGVDGRVDAGEHNVLTVSAG*
Ga0068869_10004945213300005334Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAGERGG*
Ga0068869_10014722933300005334Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0070680_10001556843300005336Corn RhizosphereVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGAELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0070689_10165210123300005340Switchgrass RhizosphereVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0070709_1047170633300005434Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPANVQGRVDAGEHNVLTVSAG*
Ga0070711_10005184943300005439Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0070700_10002138153300005441Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0070694_10165014223300005444Corn, Switchgrass And Miscanthus RhizosphereVLIFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0070663_10071551933300005455Corn RhizosphereATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0066654_1002911033300005587SoilVLTFTDRAADALSTFHAAAARWDPSARLRLVRHGAELRPEFTDGASDGEVEVAVGSITVLVPEGVQGSVDAGEHNVLTVSAG*
Ga0068866_1040449623300005718Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPELADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0066903_10179679923300005764Tropical Forest SoilLTFTDRAADALTTFHAAAARWDPSARLRLVRHGAELRPEFADAATDGDVEIAIGAITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0068858_10051983813300005842Switchgrass RhizosphereTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0081539_1003827043300005985Tabebuia Heterophylla RhizosphereVLSFTDRAVDALRTFHNAAARWNPDVRLRLIRVGSELRPELADDAAPGDVELTLGDVTLFVPPDVEGRVDAGEHNVLTVSKA*
Ga0070715_1004439343300006163Corn, Switchgrass And Miscanthus RhizosphereVLTFTERAADALTTFHAAAARWDPDARLRLVRDGAGLRPEFADGLTDGDVEVAVGSISVWVPAGVEGRVDAGDHNVLTVSAG*
Ga0070715_1009898733300006163Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPAGVQGRVDAGEHNVLTVSAG*
Ga0070716_10123349033300006173Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPANVQGRVD
Ga0070712_10005316923300006175Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGGADGDVEVAIGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0070712_10077475513300006175Corn, Switchgrass And Miscanthus RhizosphereAAAARWDPDARLRLVREGAELRPEFADGPTDGDVEVAVGSITVWVPAGVEGRVDAGDHNVLTVSAG*
Ga0066658_1023919333300006794SoilVLTFTDRAADALSTFHAAAARWDPSARLRLVRHGAELRPEFTDAAVDGEVEVAVGSITVLVPAGVRGMVDAGEHNVLTVSAG*
Ga0075425_10240462313300006854Populus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGPELWPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVS
Ga0075435_10160120413300007076Populus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPAGVQGRVDA
Ga0111539_1164178023300009094Populus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVWAGERGG*
Ga0105245_1001935263300009098Miscanthus RhizosphereLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0105245_1002969353300009098Miscanthus RhizosphereVLTFTDRATEALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0105245_1286245713300009098Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVDGRVDAGEHNALTVSAG*
Ga0105247_1121693423300009101Switchgrass RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPAGVEGRVDAGEHNVLTVSAGNGEAR*
Ga0105238_1252360423300009551Corn RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAGERGG*
Ga0105239_1072870733300010375Corn RhizosphereRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVDGRVDAGEHNVLTVSAG*
Ga0105239_1185568623300010375Corn RhizosphereVLTFTDRAADALTTFHTAAARWNPDVRRRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEL
Ga0134127_1001242073300010399Terrestrial SoilVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGIDGIVDAGEHNVLTVSRG*
Ga0134127_1075713113300010399Terrestrial SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFAEDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0134122_1007671743300010400Terrestrial SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFVDDAPDSDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0134121_1106243433300010401Terrestrial SoilFTDRAADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0134123_1023659033300010403Terrestrial SoilLIFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPELADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG*
Ga0150984_10937912423300012469Avena Fatua RhizosphereVAPAWASVALTGASIWRVLTFTDRAADALSTFHAAAARWDPSARIRLVRHGSELRPEFTDSVAEGEVEVAVGDITVLVPDGVDGRVDAGEHNVLTVAAG*
Ga0150984_11369023733300012469Avena Fatua RhizosphereVALTGASIWRVLTFTDRAADALSTFHAAAARWDPSARLRLVRHGSELRPEFTDSVAEGEVEVAVGEITVLVPDGVDGRVDAGEHNVLTVAAG*
Ga0150984_11550172523300012469Avena Fatua RhizosphereVLTFTDRATDALSTFHAAAARWDPSARLRLVRHGAELRPEFTDAAVDGEVEVAVGSITVLVPAGVRGMVDAGEHNVLTVSAG*
Ga0150984_11655536713300012469Avena Fatua RhizosphereVLTFTDRAADALTTFHAAATRWDPSARLRLVRHGAELRPEFTDDVVEGDVEMSVGTIRVLVPSGVDGRVDAGEHNVLTMSAG*
Ga0157285_1027353113300012897SoilTDALTTFHAAAARWDPSARLRLVRHGAELRPEFAEDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSVG*
Ga0157285_1036930313300012897SoilVLTFTDRAADALVTFHTAAARWNPTVRLRLVRIGSELRPELADAAEPEDVEMTLGDLAVLVPAGIDGLVDAGEHNVLTVSKA*
Ga0157286_1022689233300012908SoilAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSVG*
Ga0157298_1023177023300012913SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIELTVGTITVWVPAGVEGRVDAGEHNVLTVSVG*
Ga0157302_1005818713300012915SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDA
Ga0164300_1014619823300012951SoilVLTFTDRATDALTTFHAAAARWDPSTRLRLVRHGAELRPEFADDAPDGDIEVSVGTITVWVPAGVDGRVDAGEHNVLTVSAG*
Ga0164299_1003266733300012958SoilLTFTERATDALTTFHAAAARWDPGARLRLVRDGGTLRPEFADAAMDDDVEVAVGTITVWVPAGVEGRVDAGDHNVLTVSAG*
Ga0164299_1045216823300012958SoilVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAEDGDVEVAIGTITVWVPAGVQGRVDAGEHNVLTVSAG*
Ga0164299_1085752613300012958SoilTFHAAAARWDPAARLRLVRHGAELRPEFTDGATDGDVEVAVGAITVLVPAGVEGRVDAGEHNVLTVSAV*
Ga0164302_1056780933300012961SoilLTVTERATDALTTFHAAAARWDPGARLRLVRDGGTLRPEFADAAMDDDVEVAVGTITVWVPAGVEGRVDAGDHNVLTVSAG*
Ga0164302_1181264723300012961SoilVLTFTDRAADAVTTFHTAAARWSPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG*
Ga0164309_1014238123300012984SoilVLTFTDRAADALSTFHAAAARWDPAARLRLVRHGAELRPEFTDGATDGDVEVAVGAITVLVPAGVEGRVDAGEHNVLTVSAV*
Ga0164304_1024045933300012986SoilPFFTDRAADALSTFHAAAARWDPAARLRLVRHGAELRPEFTDGATDGDVEVAVGAITVLVPAGVEGRVDAGEHNVLTVSAV*
Ga0164304_1186847413300012986SoilLTFTERATDALTTFHAAAARWDPGARLRLVRDGGTLRPEFADAATDDDVEVAVGTITVWVPAGVEGRVDAGDHNVLTVSAG*
Ga0164307_1144460213300012987SoilDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPAGVQGRVDAGEHNVLTVSAG*
Ga0164305_1047947713300012989SoilVLTFTDRAADALSTFHAAAARWDPAARLRLVRHGAELRPEFTDGATDGDVEVAVGAITVLVPAGVEGRVDASEHNVLTVSAV*
Ga0164305_1128369413300012989SoilDRATDALTTFHAAAARWDPSTRLRLVRHGAELRPEFADDAPDGDIEVSVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0157374_1193441213300013296Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARMRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0132258_1038029533300015371Arabidopsis RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKDGAELRPEFSDGAADGDVEVAIGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0132258_1353865523300015371Arabidopsis RhizosphereMLTFTDRAAEALATFQTAAARWNPEVRIRLVAAGTELRPELAEAPQDDDVPVAVGALTVFVPSGVDGVVDAGEHNALIVSKG*
Ga0132256_10042164933300015372Arabidopsis RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVSVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0132257_10095294433300015373Arabidopsis RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDA
Ga0132257_10386606213300015373Arabidopsis RhizosphereTDRATDALTTFHAAAARWDPSTRLRLVRHGAELRPEFADDAPDGDIEVSVGTITVWVPAGVEGRVDAGEHNVLTVSAG*
Ga0132255_10344366723300015374Arabidopsis RhizosphereVLTFTDRATDALTTFHAAAARWDPSTRLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPAGVEGRVD
Ga0163161_1074604513300017792Switchgrass RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNV
Ga0163161_1098562523300017792Switchgrass RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0190268_1050022713300018466SoilVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGSELRPELADTPGPDDVELALGSITVLVPPGVDGVVDAGEHNVLTVSRG
Ga0173482_1011919533300019361SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVWAGERGG
Ga0173479_1051625923300019362SoilVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGGADGDVEVAIGTITVWVPAGVEGRVDAGEH
Ga0173479_1079839413300019362SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVDGRVDAGEHNVLTVSAG
Ga0206350_1136668423300020080Corn, Switchgrass And Miscanthus RhizosphereVWQITDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG
Ga0182009_1048745223300021445SoilVLTFTDRAADALSTFHEAAARWDPSARLRLVRHGAELRPEFTDGAADGDVEVAVGSITVLVPSGVEGRVDAGEHNVLTVSAI
Ga0247793_104647813300023066SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSVG
Ga0247794_1014414923300024055SoilVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAGERGG
Ga0247677_102270713300024245SoilVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGGADGDVEVAIGTITVWVPAGVEGRVDAGEHNVLTVS
Ga0207642_1008743633300025899Miscanthus RhizosphereVLTFTDRAADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG
Ga0207642_1093413713300025899Miscanthus RhizosphereTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0207645_1007035333300025907Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG
Ga0207645_1059828113300025907Miscanthus RhizosphereADALTTFHTAAARWNPDVRLRLVHVGTELRPELADAPEPDDVELALGAIHVLVPRGVDGIVDAGEHNVLTVSRG
Ga0207693_1002504313300025915Corn, Switchgrass And Miscanthus RhizosphereVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGAADGDVEVAIGTITVWVPAGVQGRVDAGE
Ga0207693_1021851213300025915Corn, Switchgrass And Miscanthus RhizosphereMVLTFTDRAADALTTFHAAAARWDPSARLRLVKHGAELRPEFSDGGADGDVEVAIGTITVWVPAGVQGRVDAGEHNVLTLSAG
Ga0207694_1112595223300025924Corn RhizosphereDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAGERGG
Ga0207687_1007669233300025927Miscanthus RhizosphereVLTFTDRATEALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0207687_1038811823300025927Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0207687_1157663423300025927Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGAITVWVPAGVEGRVDAGEHNVLTVSAG
Ga0207670_1147336313300025936Switchgrass RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVDG
Ga0207704_1022336933300025938Miscanthus RhizosphereVLTFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPQFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0207658_1177948123300025986Switchgrass RhizosphereRGVLIFTDRATDALTTFHAAAARWDPSARLRLVRHGAELRPELADDAPDGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0207639_1128919123300026041Corn RhizosphereLSSATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPGDIEVAVGTITVWVPPGVEGRVDAGEHNVLTVSAG
Ga0209152_1002264533300026325SoilVLTFTDRAADALSTFHAAAARWDPSARLRLVRHGAELRPEFTDAAVDGEVEVAVGSITVLVPAGVRGMVDAGEHNVLTVSAG
Ga0209999_112344613300027543Arabidopsis Thaliana RhizosphereVLTFTDRAADALTTFHTAAARWNPDVWLRLVRVGTELRPELADTPEPDDVELALGAITVLVPPGIDGVVDAGEHNVLTVSRG
Ga0207428_1114241113300027907Populus RhizosphereDRATDALTTFHAAAARWDPSARLRLVRHGAELRPEFADDAPDGDIEVTVGTITVWVPAGVEGRVDAGEHNVLTVSAG
Ga0307307_1005865013300028718SoilVLTFTDRAADALSTFHAAAVRWDPAARLRLVRHGAELRPEFTDAATEGDVEVAVGTITVLVPTDVEGRVDAGEHNVLTVSAV
Ga0247826_1155242313300030336SoilVLTFTDRAADALSTFHAAAARWDPGARLRLVRHGAELRPEFTDGATDGDVEVEVGAITVLVPAGVEGR
Ga0307498_1049237413300031170SoilVLIFTERAADALSTFYAAAARWDPGARLRLVRHGAELRPEFTDGATDGDIEVAVGAITVLVPAGVDGRVDAGEHNVLTVSAV
Ga0307468_10003713743300031740Hardwood Forest SoilVLTFTDRAADALSTFHAAAARWDPGARLRLVRHGAELRPEFTDGATDGDVEVAIGAITVLVPAGVEGRVDAGEHNVLTVSAV
Ga0308175_10078231333300031938SoilVLTFTDRAADALSTFHAAAARWDPAARLRLVRHGTELRPEFTDGVADGEVEVSVGSITVLVPAGVDGRVDAGEHNVLTVSAG
Ga0307409_10208970113300031995RhizosphereVLTFTDRATAALETFHSAAARWNPDVVLRLVRVGTELRPELAVDRVAGDVELTVGELTVLVPAGVDGVVDAGEHNVLMVSKE


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