Metagenome / Metatranscriptome Family F084783

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084783
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	130 residues
Representative Sequence	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT
Number of Associated Samples	88
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	61.82 %
% of genes near scaffold ends (potentially truncated)	35.71 %
% of genes from short scaffolds (< 2000 bps)	77.68 %
Associated GOLD sequencing projects	86
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (98.214 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (31.250 % of family members)
Environment Ontology (ENVO)	Unclassified (34.821 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (48.214 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 32.69% Coil/Unstructured: 67.31%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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SCOP family	SCOP domain	Representative PDB	TM-score
b.1.33.1: Membrane antigen precursor-like	d3pjla_	3pjl	0.73321
b.1.33.0: automated matches	d3lzla_	3lzl	0.73259
b.1.29.4: Complement C3 MG3-like	d2a73a3	2a73	0.63139
b.1.29.4: Complement C3 MG3-like	d3cu7a3	3cu7	0.61483
b.1.10.2: gamma-adaptin C-terminal appendage domain-like	d2a7ba_	2a7b	0.61346

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07519	Tannase	15.18
PF07589	PEP-CTERM	2.68
PF02493	MORN	1.79
PF04679	DNA_ligase_A_C	1.79
PF13511	DUF4124	1.79
PF03401	TctC	0.89
PF00496	SBP_bac_5	0.89
PF13501	SoxY	0.89
PF00012	HSP70	0.89
PF04386	SspB	0.89
PF00529	CusB_dom_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1793	ATP-dependent DNA ligase	Replication, recombination and repair [L]	1.79
COG2849	Antitoxin component YwqK of the YwqJK toxin-antitoxin module	Defense mechanisms [V]	1.79
COG4642	Uncharacterized conserved protein	Function unknown [S]	1.79
COG0443	Molecular chaperone DnaK (HSP70)	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG2969	Stringent starvation protein B, binds SsrA peptide	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG3181	Tripartite-type tricarboxylate transporter, extracytoplasmic receptor component TctC	Energy production and conversion [C]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	98.21 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	94.64 %
Unclassified	root	N/A	1.79 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	74.11 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7.14 %
Unclassified	root	N/A	1.79 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Betaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria	68.75 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4.46 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1.79 %
Unclassified	root	N/A	1.79 %
Neisseriales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	68.75 %
Unclassified	root	N/A	1.79 %
Chromobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae	0.89 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %
Myxococcales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales	0.89 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	68.75 %
Unclassified	root	N/A	1.79 %
Pseudogulbenkiania	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania	0.89 %
Sorangiineae	suborder	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae	0.89 %
Hyphomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium	0.89 %
Methylobacterium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	68.75 %
Unclassified	root	N/A	1.79 %
Hyphomicrobium nitrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	0.89 %
unclassified Methylobacterium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium	0.89 %
Polyangiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae	0.89 %
unclassified Pseudogulbenkiania	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	68.75 %
Unclassified	root	N/A	1.79 %
Methylobacterium sp. EUR3 AL-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. EUR3 AL-11	0.89 %
Pseudogulbenkiania sp. MAI-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania → Pseudogulbenkiania sp. MAI-1	0.89 %
Sorangium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium	0.89 %
Hyphomicrobium nitrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Betaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	68.75 %
Unclassified	root	N/A	1.79 %
Sorangium cellulosum	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	0.89 %
Methylobacterium sp. EUR3 AL-11	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. EUR3 AL-11	0.89 %
Pseudogulbenkiania sp. MAI-1	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania → Pseudogulbenkiania sp. MAI-1	0.89 %
Hyphomicrobium nitrativorans	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	0.89 %
Comamonadaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_103674953	All Organisms → cellular organisms → Bacteria → Proteobacteria	680	Open in IMG/M
3300002245\|JGIcombinedJ26739_100435765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1188	Open in IMG/M
3300002245\|JGIcombinedJ26739_100909678	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	762	Open in IMG/M
3300002908\|JGI25382J43887_10378929	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Neisseriales → Chromobacteriaceae → Pseudogulbenkiania → unclassified Pseudogulbenkiania → Pseudogulbenkiania sp. MAI-1	598	Open in IMG/M
3300005167\|Ga0066672_10531560	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	762	Open in IMG/M
3300005171\|Ga0066677_10031069	All Organisms → cellular organisms → Bacteria → Proteobacteria	2558	Open in IMG/M
3300005177\|Ga0066690_10145785	All Organisms → cellular organisms → Bacteria → Proteobacteria	1553	Open in IMG/M
3300005180\|Ga0066685_10193764	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1393	Open in IMG/M
3300005187\|Ga0066675_10328040	All Organisms → cellular organisms → Bacteria → Proteobacteria	1114	Open in IMG/M
3300005436\|Ga0070713_100000090	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	57703	Open in IMG/M
3300005436\|Ga0070713_101306438	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	703	Open in IMG/M
3300005445\|Ga0070708_100074003	All Organisms → cellular organisms → Bacteria → Proteobacteria	3071	Open in IMG/M
3300005554\|Ga0066661_10546457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300005559\|Ga0066700_10530811	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	820	Open in IMG/M
3300005559\|Ga0066700_10741211	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	668	Open in IMG/M
3300005561\|Ga0066699_10369655	All Organisms → cellular organisms → Bacteria → Proteobacteria	1025	Open in IMG/M
3300005598\|Ga0066706_11503582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300005937\|Ga0081455_10001088	All Organisms → cellular organisms → Bacteria	34174	Open in IMG/M
3300006032\|Ga0066696_11026957	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Methylobacterium → unclassified Methylobacterium → Methylobacterium sp. EUR3 AL-11	524	Open in IMG/M
3300006163\|Ga0070715_10372403	All Organisms → cellular organisms → Bacteria → Proteobacteria	786	Open in IMG/M
3300006796\|Ga0066665_10401328	All Organisms → cellular organisms → Bacteria → Proteobacteria	1131	Open in IMG/M
3300006796\|Ga0066665_10804044	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	741	Open in IMG/M
3300006800\|Ga0066660_10221312	All Organisms → cellular organisms → Bacteria → Proteobacteria	1459	Open in IMG/M
3300006800\|Ga0066660_10920654	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	710	Open in IMG/M
3300006844\|Ga0075428_100071873	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3781	Open in IMG/M
3300006845\|Ga0075421_100327833	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1855	Open in IMG/M
3300006845\|Ga0075421_101325898	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Hyphomicrobium → Hyphomicrobium nitrativorans	796	Open in IMG/M
3300006847\|Ga0075431_100714340	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	979	Open in IMG/M
3300006854\|Ga0075425_100397700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1587	Open in IMG/M
3300009012\|Ga0066710_100689262	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1557	Open in IMG/M
3300009012\|Ga0066710_101620917	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	990	Open in IMG/M
3300009029\|Ga0066793_10251300	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1025	Open in IMG/M
3300009094\|Ga0111539_11849196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	700	Open in IMG/M
3300009137\|Ga0066709_101778266	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Myxococcales → Sorangiineae → Polyangiaceae → Sorangium → Sorangium cellulosum	867	Open in IMG/M
3300009143\|Ga0099792_10506819	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	756	Open in IMG/M
3300009147\|Ga0114129_11138575	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	975	Open in IMG/M
3300010043\|Ga0126380_11291592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	635	Open in IMG/M
3300010048\|Ga0126373_10062215	All Organisms → cellular organisms → Bacteria → Proteobacteria	3349	Open in IMG/M
3300010335\|Ga0134063_10441529	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	644	Open in IMG/M
3300010360\|Ga0126372_10853123	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	908	Open in IMG/M
3300010361\|Ga0126378_11544528	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	753	Open in IMG/M
3300010362\|Ga0126377_10039061	All Organisms → cellular organisms → Bacteria → Proteobacteria	4069	Open in IMG/M
3300010366\|Ga0126379_10287592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1642	Open in IMG/M
3300011269\|Ga0137392_10982495	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	694	Open in IMG/M
3300011270\|Ga0137391_10390936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1190	Open in IMG/M
3300012189\|Ga0137388_10355128	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1352	Open in IMG/M
3300012199\|Ga0137383_10459650	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	932	Open in IMG/M
3300012199\|Ga0137383_10565669	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	832	Open in IMG/M
3300012199\|Ga0137383_10731920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	722	Open in IMG/M
3300012201\|Ga0137365_10365835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1065	Open in IMG/M
3300012205\|Ga0137362_10645765	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	911	Open in IMG/M
3300012206\|Ga0137380_10663398	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	908	Open in IMG/M
3300012207\|Ga0137381_10056119	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3264	Open in IMG/M
3300012207\|Ga0137381_11069235	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	695	Open in IMG/M
3300012207\|Ga0137381_11775320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	506	Open in IMG/M
3300012208\|Ga0137376_10060551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Comamonadaceae	3120	Open in IMG/M
3300012208\|Ga0137376_10319546	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1347	Open in IMG/M
3300012209\|Ga0137379_11648646	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	539	Open in IMG/M
3300012210\|Ga0137378_10088632	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2828	Open in IMG/M
3300012210\|Ga0137378_10995527	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	752	Open in IMG/M
3300012349\|Ga0137387_10573555	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	818	Open in IMG/M
3300012351\|Ga0137386_11062936	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	573	Open in IMG/M
3300012351\|Ga0137386_11092349	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	563	Open in IMG/M
3300012357\|Ga0137384_10146880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1974	Open in IMG/M
3300012357\|Ga0137384_10397785	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1138	Open in IMG/M
3300012359\|Ga0137385_11024258	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	681	Open in IMG/M
3300012362\|Ga0137361_10397198	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1266	Open in IMG/M
3300012362\|Ga0137361_10943196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	781	Open in IMG/M
3300012582\|Ga0137358_10067796	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2394	Open in IMG/M
3300012683\|Ga0137398_10112270	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1729	Open in IMG/M
3300012685\|Ga0137397_10086926	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2279	Open in IMG/M
3300012917\|Ga0137395_10155572	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1568	Open in IMG/M
3300012922\|Ga0137394_10030787	All Organisms → cellular organisms → Bacteria → Proteobacteria	4354	Open in IMG/M
3300012923\|Ga0137359_10604777	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	961	Open in IMG/M
3300012929\|Ga0137404_10780512	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	867	Open in IMG/M
3300012943\|Ga0164241_11383234	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	518	Open in IMG/M
3300012977\|Ga0134087_10386056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	678	Open in IMG/M
3300015051\|Ga0137414_1116829	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	837	Open in IMG/M
3300015075\|Ga0167636_1024502	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	799	Open in IMG/M
3300015197\|Ga0167638_1000918	All Organisms → cellular organisms → Bacteria	6528	Open in IMG/M
3300015371\|Ga0132258_10361551	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	3593	Open in IMG/M
3300015371\|Ga0132258_10822135	All Organisms → cellular organisms → Bacteria	2343	Open in IMG/M
3300015372\|Ga0132256_100723407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1111	Open in IMG/M
3300018429\|Ga0190272_13238480	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	507	Open in IMG/M
3300018482\|Ga0066669_10409189	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1152	Open in IMG/M
3300018482\|Ga0066669_11606974	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	594	Open in IMG/M
3300019888\|Ga0193751_1068550	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1457	Open in IMG/M
3300021432\|Ga0210384_10353188	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1324	Open in IMG/M
3300021478\|Ga0210402_10000556	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	41501	Open in IMG/M
3300021478\|Ga0210402_10151461	All Organisms → cellular organisms → Bacteria → Proteobacteria	2112	Open in IMG/M
3300021478\|Ga0210402_11257591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	667	Open in IMG/M
3300026297\|Ga0209237_1111073	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1179	Open in IMG/M
3300026300\|Ga0209027_1081884	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1186	Open in IMG/M
3300026552\|Ga0209577_10763294	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	541	Open in IMG/M
3300027535\|Ga0209734_1011320	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	1612	Open in IMG/M
3300027645\|Ga0209117_1098062	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	803	Open in IMG/M
3300027660\|Ga0209736_1062586	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1042	Open in IMG/M
3300027660\|Ga0209736_1079843	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	901	Open in IMG/M
3300027678\|Ga0209011_1010232	All Organisms → cellular organisms → Bacteria	3145	Open in IMG/M
3300027681\|Ga0208991_1234889	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	523	Open in IMG/M
3300027909\|Ga0209382_10229295	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2117	Open in IMG/M
3300028047\|Ga0209526_10097506	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	2069	Open in IMG/M
3300028047\|Ga0209526_10266247	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	1168	Open in IMG/M
3300028536\|Ga0137415_11363943	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	529	Open in IMG/M
3300030991\|Ga0073994_11973814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	569	Open in IMG/M
3300031720\|Ga0307469_12347413	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	520	Open in IMG/M
3300032180\|Ga0307471_100051511	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	3400	Open in IMG/M
3300032180\|Ga0307471_100107407	All Organisms → cellular organisms → Bacteria → Proteobacteria	2556	Open in IMG/M
3300032205\|Ga0307472_100629040	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	953	Open in IMG/M
3300032205\|Ga0307472_102237835	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → unclassified Betaproteobacteria → Betaproteobacteria bacterium	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.39%
Host-Associated	Host-Associated	11.61%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	88.39%
Plants	Host-Associated → Plants	11.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	88.39%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.93%
Rhizoplane	Host-Associated → Plants → Rhizoplane	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	73.21%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	42.86%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	21.43%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.93%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	8.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	31.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	14.29%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	8.93%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.04%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	7.14%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	4.46%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.46%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.46%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Glacier Forefield Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soil	0.89%
Glacier Forefield Soils	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Glacier Forefield Soils	0.89%
Prmafrost Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Prmafrost Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005167	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_121	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006800	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009029	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 1 DNA2013-189	Environmental	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012943	Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015051	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015075	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G5C, Northern proglacial tributary margin, adjacent to top of river)	Environmental	Open in IMG/M
3300015197	Arctic soil microbial communities from a glacier forefield, Russell Glacier, Kangerlussuaq, Greenland (Sample G6B, Proglacial plain, adjacent to northern proglacial tributary)	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300018429	Populus adjacent soil microbial communities from riparian zone of Shoshone River, Wyoming, USA - 504 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027535	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M2 (SPAdes)	Environmental	Open in IMG/M
3300027645	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2 (SPAdes)	Environmental	Open in IMG/M
3300027660	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300027678	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)	Environmental	Open in IMG/M
3300027681	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300030991	Metatranscriptome of forest soil microbial communities from Montana, USA - Site 5 -Soil GP-1A (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1036749531	3300000956	Soil	MQVKTFAVVFASVFNLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIVTLYVESEEGKPVATKGVKATLTLIAPQRPGQEVKLISAVENKFTATGLKPVPGD
JGIcombinedJ26739_1004357651	3300002245	Forest Soil	MKTLAVVIASVFNLFAFGNAFAHGDHPSTHGGTVGRGDEAIVVEFVMEKGTLTLYIHDEAGKPLPTKNLTGTLTVIPPQHPAQEVKLVWAGYHQFAAPGVEPVPGDRLRAHITLPTGEELESLALFSQVNRDKPGLSFSVGAFLLDGAGATGDKLP*
JGIcombinedJ26739_1009096781	3300002245	Forest Soil	MKRLAVAVASVFNLLAFGNAYAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATKNVTATLTVIAPQRPAQEVKLVRAGDDKFTAPGLKPAPGDRLKARITLPSGEELESVGLFPK*
JGI25382J43887_103789291	3300002908	Grasslands Soil	MKTRAVIVASVFNLLAFGNAYAHGDHPSTHGGVVGRGDDEVVVEFVMEKGTLNVYVHDEEGKPLATENITATLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLSTGEEFESVALFTQ*
Ga0066672_105315601	3300005167	Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEDGKPLATKNVTGTLTVIAPQRPPQEVKLVRVGEDKFTAPGLVPAPGDRLKARITLPSGEELESVALFTN*
Ga0066677_100310692	3300005171	Soil	MKMLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGEDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTN*
Ga0066690_101457852	3300005177	Soil	MKMLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATKNVTGTLTVIAPQRPPQEVKLVRVGEDKFTAPGLVPAPGDRLKARITLPSGEELESVALFTN*
Ga0066685_101937641	3300005180	Soil	MHEWKQMKTLAVVTASVFNLLAFGNAYAHGDHPSTHGGTVGRGNDEIVVEFVMEKGTLNLYVDDEAGEPLATKDLKGTLTLISPQRPAQEVTLVWAGEHKFTAPGIEPFRETG*
Ga0066675_103280402	3300005187	Soil	MKFDRRNELKTLAVVVASVINMLAFGNACAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLAAKNVRGTLTVIAPQRPAQEVKLVRADDHKFTAPGIMPAPGDRLRARIALPSGEALESVGLFTK*
Ga0070713_10000009019	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MKTLALAIASVLNLLAVEIAYAHGDHPSTHGGTVGRGNDEIVVEFVMENGTLNLYVDDEAGKPLATENVTGTLTLVPAQRPAKEVKLVHAGSHKFTAPGIEPVPGDRMRARIRLPTGEEFESVALFTQDKRD*
Ga0070713_1013064381	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	SEDKQRDDMHQEKQLKTLALVIASVFNLLVFENACAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATENVKGTLTVIAPQRPVQEVKLVRAGDHKFTAPGLKPAPGDRLKARITLPNGEELESVGLFAK*
Ga0070708_1000740032	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	MEKQLKTLAVVMASVFNLLVFGNACAHGDHPSEHGGVVGRGDDEIVVEFVLEKGTINVYVHDEAGKPLATKNVTGTLTLIAPQRPAQEVKLVRADDHKFTAPGIKPAPGDRLRARIKLSTGEELESVALFTQ*
Ga0066661_105464572	3300005554	Soil	MKTLAVVVASVINLLVFGNAYAHGDHASEYGGVVGRRDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTK*
Ga0066700_105308111	3300005559	Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEEGKPLATKTITGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0066700_107412111	3300005559	Soil	NDLHQGKQMKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEDGKPLATKNVTGTLTVIAPQRPPQEVKLVRVGEDKFTAPGLVPAPGDRLKARITLPSGEELESVALFTN*
Ga0066699_103696552	3300005561	Soil	MKTLAVVVASVFNLLVFGNAYAHGDHASEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTN*
Ga0066706_115035821	3300005598	Soil	WAHGDHEPTYGGTVGRGDDAIVIEFVMENGILNVYVHDEEGKPLATKNITGTLTLISPQRPAQEVKLVSASPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0081455_100010886	3300005937	Tabebuia Heterophylla Rhizosphere	MQVKTFAVVFASVFYLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIVTLYVESEEGMPIATEGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESLILVGK*
Ga0066696_110269571	3300006032	Soil	RNELKTLAVVVASVINMLAFGNACAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT*
Ga0070715_103724032	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MHQEKQLKTLAVVIASVFNLLVFGNACAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATENVKGTLTVIAPQRPVQEVKLVRAGDHKFTAPGLKPAPGDRLKARITLPNGEELESVGLFAK*
Ga0066665_104013282	3300006796	Soil	VKTFAIVFASLFNLLAFGSTYAHGDHDPKHGGTVGRGDDDIVIEFVMHKGTVTLYVEDDTGKPIATKDIKGTLTLVAPQRAGQEVKLVSAGNNKFTATGLAPVPGDRLRARI
Ga0066665_108040441	3300006796	Soil	MLAAVFASVLYALAIGSAYAHGDHPSTHGGTVGRGDDEIVVEFVMEKGMISLYVHDEAGKPFAINNVSGTLTLVPPQHSAQEVKPVQVGYHKFTAPGIEPVPGDRLRARITLPSGQEL
Ga0066660_102213122	3300006800	Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEDGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFTAPGLVPAPGDRLKARITLPS
Ga0066660_109206541	3300006800	Soil	DLHQGKQMKMLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPTPGDRLKARITLPSGEELESVALFTN*
Ga0075428_1000718734	3300006844	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLPSGEELESVCLVSK*
Ga0075421_1003278332	3300006845	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKP
Ga0075421_1013258981	3300006845	Populus Rhizosphere	NLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIVTLYVESEEGKPIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVCLVSK*
Ga0075431_1007143401	3300006847	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLPSGEELESVCLVSK
Ga0075425_1003977001	3300006854	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLNPVPGDRLRARITLPSGEELESVCLVSK*
Ga0075424_1017590962	3300006904	Populus Rhizosphere	MKTFAVVFASVLNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKETVTLYVESEEGKPIATKGIKGTLTLIAPRRSGQEVKLISAGGNKFTATGLKP
Ga0066710_1006892622	3300009012	Grasslands Soil	MHEWKQMKTLAVVTASVFNLLAFGNAYAHGDHPSTHGGTVGRGNDEIVVEFVMEKGTLNLYVDDEAGEPLATKDLKGTLTLISPQRPAQEVTLVWAGEHKFTAPGIEPVPGDRLRARIALPSGEELESVALFTK
Ga0066710_1016209172	3300009012	Grasslands Soil	MKVLAMLIASVLNLLVFGNVWAHGDHEPTYGGTVGRGDDEIVIEFVMEKGTLNVYVHDEEGKPLATKNITGTLTLVSPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLSTGEEFESVALFTQ
Ga0066793_102513001	3300009029	Prmafrost Soil	MHQEKQLKTLAVVIVSVFNLLAFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTLIAPQRPAQEVKLVRADDHKFTAPGIKPAPGDRLRARIKLSTGEELESVGLFTK*
Ga0111539_118491962	3300009094	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLPSG
Ga0066709_1017782661	3300009137	Grasslands Soil	VKTFAIVFASLFNLLAFGSTYAHGDHDPKHGGTVGRGDDDIVIEFVMHKGTVTLYVEDDTGKPIATKDVKGTLTLVAPQRAGQEVKLVSAGNNKFTATGLAPVPGDRLRARITLPSGEELESVSLVGK*
Ga0099792_105068192	3300009143	Vadose Zone Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFRAPGLVPAPGDRLKARITLPSGEALESVGLFTGTSQ*
Ga0114129_111385752	3300009147	Populus Rhizosphere	CSRRNRSEQEAASGPPLVYVSTIQGREMQVKTFAVVFASVFNLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIVTLYVESEEGKPIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK*
Ga0126380_112915921	3300010043	Tropical Forest Soil	QGRGMQVKTFAVVFASGFNLIAFGSAYPHGDHNPKHGGTVGRGNDEIVIEFVVEKGIVTLYVESEEGKPIATKGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPGGEELESVSLVGK*
Ga0126373_100622152	3300010048	Tropical Forest Soil	MQVKAFAVVFASVFNLIAFGTAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKLIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK*
Ga0134063_104415292	3300010335	Grasslands Soil	MKLLAVVIASVLNLTAFGNAYAHGDHPSTHGGTVGRGDDEIVVEFAMEQGTLNVYVHDEEGKPLATKNITGSLTLISPQRLAQEFKLISAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTT*
Ga0126372_108531231	3300010360	Tropical Forest Soil	EQEAASGPPLVYVSTIQGRGMQVKTFAVVFASGFNLIAFGSVYAHGDHNPKHGGTVGRGDDQIVIEFVVEKGTVTLYVESEEGKLIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK*
Ga0126378_115445281	3300010361	Tropical Forest Soil	RGMQVKTFAVVFASVFNLIAFGTAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKLIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK*
Ga0126377_100390611	3300010362	Tropical Forest Soil	MQVKTFAVVFASGFNLIAFGSAYPHGDHNPKHGGTVGRGNDEIVIEFVVEKGIVTLYVESEEGKPIATKGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPGGEELESVSLVGK*
Ga0126379_102875921	3300010366	Tropical Forest Soil	MQVKTFAVVFASVFNLIAFGTAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKLIATKGVKATLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK*
Ga0137392_109824951	3300011269	Vadose Zone Soil	MHQEKPMKTLAVVIASVFNLLAFGNAYAHGDHPSTHGGTVGRGDDAIVVEFVMEKGTINLYVHDEAGKPLATKNVTGTLTLIAPQRPAQEVKLVRAGDDKFTAPGIVPARGDRLKARITLPGGEELESVGLFAK*
Ga0137391_103909362	3300011270	Vadose Zone Soil	MKTLAVVIASVFNLLAFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTLIAPQRPAQEVKLVRAGDDKFTAPGIVPARGDRLKARITLPGGEELESVGLFAK*
Ga0137388_103551281	3300012189	Vadose Zone Soil	LAVVIASVFNLLAFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTLIAPQRPAQEVKLVRAGDDKFTAPGIVPARGDRLKARITLPGGEELESVGLFAK*
Ga0137383_104596501	3300012199	Vadose Zone Soil	MKVLAVVIASVFNLLAFGNAYAHGDHPSTHGGTVGRGDDAIVVEFVMENGILNVYVHDEEGKPLGTKNITGTLTLISPQRPAREVKLVSAGPDKFAALGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0137383_105656691	3300012199	Vadose Zone Soil	MHEEKPMKTLALVIASVFNLLAFGNAYAHGDHEATHGGTMGVGSDEIVVEFVMENGTLNLYVHDETGKPLSIKNLRGTLTLIAPQRPAQEVKLVAAGDNKFKAPGIAPVRGDGMVARITLSSGQEMESAALFSE*
Ga0137383_107319201	3300012199	Vadose Zone Soil	MPEEKQMKTLAVVVASVFNLLAFGSAYAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARI
Ga0137365_103658352	3300012201	Vadose Zone Soil	MPEEKQMKTLAVVVASVFNLLAFGSAYAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFSQ*
Ga0137362_106457651	3300012205	Vadose Zone Soil	RQVLDKQRNDLHQGKQMKTLAVVVASVFNMLAFGNAHAHGDHEATHGGTVGVGSDEIVVEFVMENGTLNLYVHDETGKPLSIKNLRGTFTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDGMVARITLRSGEEMESAALFSE*
Ga0137380_106633982	3300012206	Vadose Zone Soil	MKTLTVVVASVFNLLACGNAYAHGDHEATHGGTVGVGNDEIVVEFVMEHGTLNVYVHDEAGKALSIKNLRGTLTLIAPQRPAQEVKLVAAGEHKFKAPGIAPDRGDRMVARITLPSGEEMESAALFSE*
Ga0137381_100561192	3300012207	Vadose Zone Soil	MPEEQQMKTLAVVVASVFNLLAFGSAHAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSASPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0137381_110692351	3300012207	Vadose Zone Soil	TLAVVIASVFNLLAFGNAYAHGDHEATHGGVVGRGDDEIVVEFVMEKGILNVYVHDEEGKPLATKNITGTLTLISPQRPAQEFKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFSQ*
Ga0137381_117753201	3300012207	Vadose Zone Soil	MKTLTVVVASVFNLLAFGNAYAHGDHPSTHGGTVGRGDEAIVVEFGMEKGTINLDVHDEAGKPLATEDLTGTLTLISPQRPAQEVKLVRADSHKFTAPGIEPLPGDRLRARIRLPSGEELESVALFSK*
Ga0137376_100605512	3300012208	Vadose Zone Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT*
Ga0137376_103195462	3300012208	Vadose Zone Soil	MKFDRRNELKTLAVVVASVINMLAFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFTAPGLVPAPGDRLKARITLPSGEQLESVGLFTK*
Ga0137379_116486461	3300012209	Vadose Zone Soil	QEKPMRTLAVVIASVFNLLAFGNAYAHGDHEATHGGTVGVGNDEIVVEFVMENGTLNLYVHDETGKPLSIKNLRGTFTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDGMVARITLPSGEEMESAALFSE*
Ga0137378_100886322	3300012210	Vadose Zone Soil	MPEEKQMKTLAVVVASVFNLLAFGSAHAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0137378_109955271	3300012210	Vadose Zone Soil	MHQEKPMKTLAVVVASVFNLLAFGNAYAHGDHEATHGGTMGVGSDEIVVEFVMEHGTLNVYVHDEAGKALSIKNLRGTLTLIAPQRPAQEVKLVAAGDNKFKAPGIAPVRGDGMVARITLPSGEEMESAALFSE*
Ga0137387_105735551	3300012349	Vadose Zone Soil	SVFNLLAFGSAHAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPGQGDRMRARIKLPTGEELESVALFTQ*
Ga0137386_110629361	3300012351	Vadose Zone Soil	FNLLAFGSAHAHGDHESTHGGTVGRGDDEIVVEFVMEKGTLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFSQ*
Ga0137386_110923492	3300012351	Vadose Zone Soil	MWPRQLGHYATHLERMSARFAEEKQMRTLAVVIASVFNLLAFGNAYAHGDHEATHGGTVGVGNDEIVVEFVMENGTLDLYVHDETGKPLSIKNLRGTFTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDGMVARITLSSG
Ga0137384_101468802	3300012357	Vadose Zone Soil	MPEEKQMKTLVVVVASVFNLLAFGSAYAHGDHESTHGGTVGRGDDEIVVEFVMEKGMLNVYVHDEAGKPLATKNVTGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPGQGDRMRARIKLPTGEELESVALFSQ*
Ga0137384_103977852	3300012357	Vadose Zone Soil	MIASEETKMKTFALVIASVFNLLAFGNAYAHGDHEATHGGVVGRGDDEIVVEFVMEKGTLNVYVHDEEGKPLATKNITGTLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLPTGEELESVALFTQ*
Ga0137385_110242582	3300012359	Vadose Zone Soil	MKTLAVLVASVFNLLAFGNAYAHGDHEATHGGTVGVGNDEIVVEFVMENGTINLYVHDEVGKPLSIKNLRGTLTLIAPHRAQEVKLVAAGEHKFKAPGIAPDRGDRMVARITLPSGEEMEAAALFSE*
Ga0137361_103971982	3300012362	Vadose Zone Soil	MKTLVLVVASVFNLLAFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFTAPGLVPAPGDRLKARITLPSGEQLESVGLFTK*
Ga0137361_109431961	3300012362	Vadose Zone Soil	NMLAFGNAHAHGDHEATHGGTVGVGSDEIVVEFVMENGTLNLYVHDETGKPLSIKNLRGTFTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDGMVARITLRSGEEMESAALFSE*
Ga0137358_100677962	3300012582	Vadose Zone Soil	MKTLAVVVASVFNLLVFANAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT*
Ga0137398_101122701	3300012683	Vadose Zone Soil	MRTLAVVIASVFNMLAFGNAYAHGDHPSTHGGTVGRGDDEIVVEFVMERGTINLYVHDEAGKPLATEDLTGTLTLISPQRPAQEVKLVRADSRKFRAPGIEPVPGDRLRARIRLPSGEELESVALFTK*
Ga0137397_100869262	3300012685	Vadose Zone Soil	MQVKTFAVVFASVFNLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIATLYIESEEGKPIATKGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLLGGEEIESVCLVSK*
Ga0137395_101555722	3300012917	Vadose Zone Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEEGKPLATKNVAGTLTVIAPQRPAQEVKLVRAGDHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTK*
Ga0137394_100307874	3300012922	Vadose Zone Soil	MQVKTFAVVFASVFNLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIATLYIESEEGKPIATKGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLLSGEELESVCLVSK*
Ga0137359_106047772	3300012923	Vadose Zone Soil	FGNAYAHGDHPSTHGGTVGRGDDEIVVEFVMERGTINLYVHDEAGKPLATEDLTGTLTLISPQRPAQEVKLVRADSRKFRAPGIEPVPGDRLRARIRLPSGEELESVALFTK*
Ga0137404_107805121	3300012929	Vadose Zone Soil	MRTLAVVIASVFNLLAFGNAYAHGDHEATHGGTVGVGNDEIVVEFVMENGTLNLYVHDETGKPLSIKNLRGTFTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDGMVARITLPSGEERESAALFSE*
Ga0164241_113832341	3300012943	Soil	MKTLAILVASSGFGLFACGNAFAHGDHKSTHGGDVGRGNDEIVIEFVMEKGTLNLYVDDEQGKPMDTDKVTGTLTLLSPQRPAQEVKLEQAGPHRLFAPGIKPAPGERMRAHIKFPGGEEFESVALFSDHKPGKHGAAA
Ga0134087_103860562	3300012977	Grasslands Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGEDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT*
Ga0137414_11168291	3300015051	Vadose Zone Soil	VYVSTIQGRGMQVKTFAVVFASVFNLIAFGSAYPHGDHNPKHGGTVGRGDDQIVIEFVVEKGIATLYIESEEGKPIATKGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPIPGDRLRARITLLSGEELESVCLVSK*
Ga0167636_10245022	3300015075	Glacier Forefield Soils	MTLHQEKQMKTLAVVIASVFNLLVFGNACAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTLNVYVQDEAGNPLATKKIIGTLTVSSPQRRAQEVKLVSAGSDKFAAPGITPVPGDRLRARIKLPSGEEFESVALFLPH*
Ga0167638_10009183	3300015197	Glacier Forefield Soil	MKRLTVVVASVFNLIAFGNACAHGDHPSEHGGVVGRGDDAFVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFKAPGLVPAPGDRLRARITLPSGEELESVGLFVGESQ*
Ga0132258_103615515	3300015371	Arabidopsis Rhizosphere	VFSLLAFEVASAHGDHPSTHGGTVGRGNDEIVVEFVMENGMLTLYVDDEAGKPLATENVTGTLTLIPPQRPAKQVKLVRTGSNKFTAPGIEPAPGDRMRARITLPSGEEVQSLALFTE*
Ga0132258_108221352	3300015371	Arabidopsis Rhizosphere	MKTLALVIASVFNLLAFEIACAHGDHPSTHGGTVGRGNDEIVVEFVMEKGALNLYVDDEAGKPLATENLTGTLTLISPQRPAKEVKLVHAGSHKFTAPGIEPVPGDRLRARITLPSGEDLESVALFSQAKRD*
Ga0132256_1007234072	3300015372	Arabidopsis Rhizosphere	MKTLALVIASVLNLLAFEIACAHGDHPSTHGGTVGRGNDEIVVEFVMENGTLNLYVDDEAGKPLATENVTGTLTLIPLQRPAKEVKLVHAGAHKFMAPGIEPVFGDRLRARIRLPSGEEL
Ga0190272_132384801	3300018429	Soil	MKTLALVIAWVFSLLTFGSACAHGDHKSTHGGIVGRGNDEIVVEFVMEKGTLNLYVHDEAGNPLATEKLTGTLTLVSPRRPAQKVKLVSSGPHKFSAPGIEPVPGDRLNARITLSSGEELESVALFRQANRDKSGLSLSVDATFLRDGPGATRDKLP
Ga0066669_104091891	3300018482	Grasslands Soil	GNAYAHGDHPSTHGGTVGRGDEAIVVEFVMEKGTINLYVHDEAGQPLATKNLKGTLTLVAPQRPAQEVKLVWAGYHKFTAPGIEPVPGDRLRARITLPSGEELESVALFTK
Ga0066669_116069741	3300018482	Grasslands Soil	TTMGRLDAQCVEPVFAGSLLLDQEKPMKMLALVITSVFNLLAFGTAFAHGDHEATHGGTVGVGNDEIVVEFVMENGTMNVYVHDEAGKPLSTKDLTGTLTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVWGDRMVVRITLPSGEEMESVALFTE
Ga0193751_10685501	3300019888	Soil	MKTLAVVIASVFNLLAFGNAYAHGDHPSTHGGVVGRGDDEIVVEFVMEKGTLNVYVHDEAGKLLETKNITGTLTVISPQRPAREVKLVPAGSDKFTAPGIEPVPGERMKARIKLPSGEELESVALFTK
Ga0210384_103531881	3300021432	Soil	LKTLAVVIASVFNLLAFGNACAHGDHDATHGGTVGVGDDAIVVEFVMENGTINLYVHEETGEPLSIKNLRGTLTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDKMVARITLPTGEETESAVYFSGVNLDKPGLAVGASSLPEGSGATNDKRP
Ga0210402_100005566	3300021478	Soil	MKTLAMVIASVFNTIAFGTAYAHGDHASEHGGIMGRGDDAIVVEFVMEKGTINLYVHDEAGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFTAPGLVPAPGDRLKARITLPSGEELESVGLFAR
Ga0210402_101514612	3300021478	Soil	MHQEKQLKTLAVVIASVFNLLVFGNACAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATENVKGTLTVIAPQRPVQEVKLVRAGDHKFTAPGLKPAPGDRLKARITLPDGEELESVGLFAK
Ga0210402_112575911	3300021478	Soil	VIASVFNLFAFGNAFAHGDHPSTHGGTVGRGDEAIVVEFVMEKGTLTLYIHDEAGKPLPTKNLTGTLTVIPPQHPAQEVKLVWAGYHQFAAPGVEPVPGDRLRAHITLPTGEELESLALFSQVNRDKPGLSFSAGAFLPDGAGATGDKLP
Ga0207665_115078371	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	KQRDDMHQEKQLKTLAVVIASVFNLLVFGNACAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTVNLYVHDEAGKPLATKNVTGTLTLIAPQGPAQEVKLVWAGYHQFAAPGVEPVPGDRLRAHITLPTGEELESLALFSQVNRDKPGLSFSVGAFLPDGAGATGDKLP
Ga0209237_11110732	3300026297	Grasslands Soil	MKTRAVIVASVFNLFAFGNAYAHGDHPSTHGGVVGRGDDEVVVEFVMEKGTLNVYVHDEEGKPLATENITATLTLISPQRPAQEVKLVSAGPDKFAAPGVKPAQGDRMRARIKLSTGEEFESVALFTQ
Ga0209027_10818842	3300026300	Grasslands Soil	MKTLAVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGEDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFTAPGLVPAPGDRLKARITLPSGEELES
Ga0209577_107632941	3300026552	Soil	MKTLVVVVASVFNLLVFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFMAPGLVPAPGDRLKARITLPGGEELESVALFTN
Ga0209734_10113202	3300027535	Forest Soil	MKTLAVVIASVFNLLVFGNACAHGDHPSEHGGVVGRGDDAFVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFTAPGIKPAPGDRMKARITLPSGEELESVGLFAK
Ga0209117_10980622	3300027645	Forest Soil	MKSLVVVIASVFTLLAFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEAGKPLAAKNVTGTLTLIAPQRPAQEVKLVRADNHKFTAPGIKPAPGDRMKARITLPSGEELESVGLFAK
Ga0209736_10625862	3300027660	Forest Soil	MKTLAVVIASVFNLLAFGNAYAHGDHPATHGGTVGVGDDVIEVEFVMEDGTINLYVHDETGAALSIKNLKGTLTVIAPQRPAQEVKLVRAGDDKFTAPGLKPAPGDRLKARITLPSGEELESVGLFPK
Ga0209736_10798432	3300027660	Forest Soil	MKTRAAVIASVFNLLVFGNACAHGDHPSTHGGIMGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATENVKGTLTVIAPQRPAQEVKLVRAGDDKFIAPGIKPAPGDRLKARIKLPSGEE
Ga0209011_10102322	3300027678	Forest Soil	MKTLAVVVASVFSLLAFGNACAHGDHPSAHGGIMGRGDDAIVVEFVMENGTLNLYVHDEAGKALSIKNLRGTLTLIAPQRPAQEVKLVAAGDNKFKAPGIAPVRGDGMVARITLPSGEEMESAAFFSE
Ga0208991_12348891	3300027681	Forest Soil	PVDAALKARALRRVVLDKQRDDTLHQEKQMKTLAVVAASVFNLLVFGNAYAHGDHPSEHGGVVGRGDDAIVVEFVMEKGTINVYVHDEAGKPLAAKNVTGTLTVIAPQRPAQEVKLVRADNHKFTAPGIVPAPGDRLKARITLPSGEELQSVGLFLK
Ga0209382_102292952	3300027909	Populus Rhizosphere	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLNPVPGDRLRARITLPSGEELESVCLVSK
Ga0209526_100975063	3300028047	Forest Soil	MKRLTVVVASVFNLLAFGNAYAHGDHPAEHGGIVGRGDDAIVVEFVMEKGTMNVYVHDEAGKPLATENVKGTLTVIAPQRPAQEVKLVRDGDHKFTAPGLVPAPGDRLRAHITLPSGQELESVGLFPK
Ga0209526_102662472	3300028047	Forest Soil	MKTLAVVIASVFNLFAFGNAFAHGDHPSTHGGTVGRGDEAIVVEFVMEKGTLTLYIHDEAGKPLPTKNLTGTLTVIPPQHPAQEVKLVWAGYHQFAAPGVEPVPGDRLRAHITLPTGEELESLALFSQVNRDKPGLSFSVGAFLPDGAGATGDKLP
Ga0137415_113639431	3300028536	Vadose Zone Soil	MRTLAVVIASVFNLLAFGNAYAHGDHPSEYGGVVGRGDDAIVVEFVMEKGTISVYVHDEEGKPLATKNVTGTLTVIAPQRPPQEVKLVRAGEHKFTAPGLVPAPGDRLKARITLPSGEELESVALFTT
Ga0073994_119738141	3300030991	Soil	MKTLAVVVASVFNLLVFGNACAHGDHPSEYGGIMGRGDDAIVVEFVMEKGTINVYVHDEAGKPLATKNVTGTLTVIAPQRPAQEVKLVRAGDDKFKAPGLVPAPGDRLRARITLPSGEELESVGLFVGESQ
Ga0307469_123474131	3300031720	Hardwood Forest Soil	LVFGNACAHGDHPSEHGGIMGRGDDAIVVEFVMEKGTINVYVHDEDGKPLATENVKGTLTVIAPQRPVREVKLVRAGDLKFTAPGIKPAPGDRLKARITLPSGEELESVGLFPK
Ga0307471_1000515111	3300032180	Hardwood Forest Soil	MQVKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVGK
Ga0307471_1001074072	3300032180	Hardwood Forest Soil	MKTLTVIIASVFNLLAFGNACAHGDHDATHGGTVGVGDDAIVVEFVMENGTINLYVHEETGEPLSIKNLKGTLTLIAPQRPAQEVKLVAAGEHKFKAPGIAPVRGDRMVARITLPSGEETESAALFSGVNLDKPGLAVGASSLPESPGATSDKLP
Ga0307472_1006290401	3300032205	Hardwood Forest Soil	MHQEKQLKTLAVVIASVFNLLVFGNACAHGDHDATHGGTVGVGDDAIVVEFVMEKGTVNVYVHDEDGKPLATENVKGTLTVIAPQRPVQEVKLVRAGDHKFTAPGLKPAPGDRLKARITLPNGEELESVGLFAK
Ga0307472_1022378351	3300032205	Hardwood Forest Soil	VKTFAVVFASVFNLIAFGSAYAHGDHNPKHGGTVGRGDDEIVIEFVVEKGTVTLYVESEEGKPIATTGVKGTLTLIAPQRPGQEVKLISAGENKFTATGLKPVPGDRLRARITLPSGEELESVSLVG

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084783

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences