Metagenome / Metatranscriptome Family F084765

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084765
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	111 residues
Representative Sequence	SPDPWSDLGTHQSFVDWDELSGLDRVVAIHQAGPNILRVETRDNREIRITAWFDRHAGRYVAEFEKRTAITSGGQQLRVWAQTPAYAKCVADDLVGCLEAAILEVDRPVY
Number of Associated Samples	81
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	28.57 %
% of genes near scaffold ends (potentially truncated)	45.54 %
% of genes from short scaffolds (< 2000 bps)	84.82 %
Associated GOLD sequencing projects	76
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.73

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (100.000 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (16.071 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (45.536 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 12.32% β-sheet: 34.78% Coil/Unstructured: 52.90%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.73
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.73
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.20.1.0: automated matches	d3fn1b_	3fn1	0.59612
d.20.1.0: automated matches	d2y9ma1	2y9m	0.58766
d.20.1.1: UBC-related	d6s98a_	6s98	0.57485
d.20.1.1: UBC-related	d2yb6a_	2yb6	0.57419
d.20.1.1: UBC-related	d1wzva1	1wzv	0.57259

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF00970	FAD_binding_6	30.00
PF14542	Acetyltransf_CG	3.64
PF09360	zf-CDGSH	2.73
PF09335	SNARE_assoc	2.73
PF02518	HATPase_c	1.82
PF00248	Aldo_ket_red	0.91
PF07730	HisKA_3	0.91
PF13368	Toprim_C_rpt	0.91
PF03764	EFG_IV	0.91
PF05368	NmrA	0.91
PF08447	PAS_3	0.91
PF08402	TOBE_2	0.91
PF00175	NAD_binding_1	0.91
PF00210	Ferritin	0.91
PF02128	Peptidase_M36	0.91
PF00679	EFG_C	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	2.73
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	2.73
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	2.73
COG0480	Translation elongation factor EF-G, a GTPase	Translation, ribosomal structure and biogenesis [J]	0.91
COG3850	Signal transduction histidine kinase NarQ, nitrate/nitrite-specific	Signal transduction mechanisms [T]	0.91
COG3851	Signal transduction histidine kinase UhpB, glucose-6-phosphate specific	Signal transduction mechanisms [T]	0.91
COG4564	Signal transduction histidine kinase	Signal transduction mechanisms [T]	0.91
COG4585	Signal transduction histidine kinase ComP	Signal transduction mechanisms [T]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	100.00 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	83.04 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	83.04 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.11 %
Candidatus Eisenbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria	0.89 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	21.43 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.79 %
unclassified Bryobacterales	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	21.43 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1.79 %
Bryobacterales bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	0.89 %
Candidatus Eisenbacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Unclassified	root	N/A	0.00 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000033\|ICChiseqgaiiDRAFT_c2233931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1082	Open in IMG/M
3300000956\|JGI10216J12902_109470849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3672	Open in IMG/M
3300000956\|JGI10216J12902_110154517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300001537\|A2065W1_10038935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	865	Open in IMG/M
3300001538\|A10PFW1_11601652	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1924	Open in IMG/M
3300002568\|C688J35102_120122086	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	889	Open in IMG/M
3300002568\|C688J35102_120786288	All Organisms → cellular organisms → Bacteria	1576	Open in IMG/M
3300004114\|Ga0062593_100722544	All Organisms → cellular organisms → Bacteria	976	Open in IMG/M
3300004157\|Ga0062590_102574746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	540	Open in IMG/M
3300004479\|Ga0062595_100112522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1482	Open in IMG/M
3300004479\|Ga0062595_100687133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	818	Open in IMG/M
3300005093\|Ga0062594_100682533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	922	Open in IMG/M
3300005093\|Ga0062594_102193886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005184\|Ga0066671_10226885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1138	Open in IMG/M
3300005329\|Ga0070683_101061518	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	778	Open in IMG/M
3300005332\|Ga0066388_100103146	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	3323	Open in IMG/M
3300005332\|Ga0066388_101181382	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1306	Open in IMG/M
3300005332\|Ga0066388_102441511	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	949	Open in IMG/M
3300005332\|Ga0066388_106335991	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300005332\|Ga0066388_107828950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	535	Open in IMG/M
3300005340\|Ga0070689_101110393	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	707	Open in IMG/M
3300005445\|Ga0070708_100499895	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1147	Open in IMG/M
3300005454\|Ga0066687_10117084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1368	Open in IMG/M
3300005456\|Ga0070678_100741381	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	888	Open in IMG/M
3300005467\|Ga0070706_101052384	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	750	Open in IMG/M
3300005468\|Ga0070707_100241338	All Organisms → cellular organisms → Bacteria	1759	Open in IMG/M
3300005468\|Ga0070707_100823961	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	892	Open in IMG/M
3300005468\|Ga0070707_102123080	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	529	Open in IMG/M
3300005471\|Ga0070698_100559936	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1083	Open in IMG/M
3300005471\|Ga0070698_101271641	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	686	Open in IMG/M
3300005526\|Ga0073909_10021236	All Organisms → cellular organisms → Bacteria	2119	Open in IMG/M
3300005526\|Ga0073909_10606392	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	541	Open in IMG/M
3300005549\|Ga0070704_102287578	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300005587\|Ga0066654_10740329	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	554	Open in IMG/M
3300005614\|Ga0068856_100990566	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	859	Open in IMG/M
3300005764\|Ga0066903_100182293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3099	Open in IMG/M
3300006046\|Ga0066652_100832200	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	882	Open in IMG/M
3300006046\|Ga0066652_100943989	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	821	Open in IMG/M
3300006163\|Ga0070715_10613359	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	639	Open in IMG/M
3300006175\|Ga0070712_101409409	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	608	Open in IMG/M
3300009012\|Ga0066710_101951951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300009090\|Ga0099827_10022278	All Organisms → cellular organisms → Bacteria	4422	Open in IMG/M
3300009098\|Ga0105245_11342386	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	764	Open in IMG/M
3300009098\|Ga0105245_12125190	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	615	Open in IMG/M
3300009148\|Ga0105243_11193881	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300009176\|Ga0105242_10700072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	991	Open in IMG/M
3300010039\|Ga0126309_10109798	All Organisms → cellular organisms → Bacteria	1433	Open in IMG/M
3300010147\|Ga0126319_1514491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	919	Open in IMG/M
3300011003\|Ga0138514_100012220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1424	Open in IMG/M
3300012204\|Ga0137374_10087666	All Organisms → cellular organisms → Bacteria	2986	Open in IMG/M
3300012204\|Ga0137374_10089048	All Organisms → cellular organisms → Bacteria	2954	Open in IMG/M
3300012204\|Ga0137374_10091552	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2901	Open in IMG/M
3300012208\|Ga0137376_10399223	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1194	Open in IMG/M
3300012209\|Ga0137379_11214402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	661	Open in IMG/M
3300012212\|Ga0150985_111287693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	879	Open in IMG/M
3300012212\|Ga0150985_116153159	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	627	Open in IMG/M
3300012212\|Ga0150985_122890994	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	705	Open in IMG/M
3300012350\|Ga0137372_10000763	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	31120	Open in IMG/M
3300012350\|Ga0137372_10580319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	825	Open in IMG/M
3300012353\|Ga0137367_10001271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	19602	Open in IMG/M
3300012353\|Ga0137367_10032463	All Organisms → cellular organisms → Bacteria	4022	Open in IMG/M
3300012354\|Ga0137366_10931474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	609	Open in IMG/M
3300012355\|Ga0137369_10222344	All Organisms → cellular organisms → Bacteria → Proteobacteria	1445	Open in IMG/M
3300012358\|Ga0137368_10060373	All Organisms → cellular organisms → Bacteria	3142	Open in IMG/M
3300012358\|Ga0137368_10584114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	711	Open in IMG/M
3300012360\|Ga0137375_10135404	All Organisms → cellular organisms → Bacteria	2433	Open in IMG/M
3300012360\|Ga0137375_10334267	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1353	Open in IMG/M
3300012406\|Ga0134053_1010050	All Organisms → cellular organisms → Bacteria	1577	Open in IMG/M
3300012469\|Ga0150984_101080611	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	654	Open in IMG/M
3300012469\|Ga0150984_101733313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1808	Open in IMG/M
3300012469\|Ga0150984_103776579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3323	Open in IMG/M
3300012469\|Ga0150984_116297884	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	592	Open in IMG/M
3300012960\|Ga0164301_11301951	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300012961\|Ga0164302_11245718	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	598	Open in IMG/M
3300012987\|Ga0164307_11505886	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	569	Open in IMG/M
3300013297\|Ga0157378_13020789	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	522	Open in IMG/M
3300014058\|Ga0120149_1203826	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	553	Open in IMG/M
3300015264\|Ga0137403_11611856	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	503	Open in IMG/M
3300015373\|Ga0132257_100760301	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1207	Open in IMG/M
3300015374\|Ga0132255_102034084	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	875	Open in IMG/M
3300017657\|Ga0134074_1360428	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → unclassified Bryobacterales → Bryobacterales bacterium	538	Open in IMG/M
3300018027\|Ga0184605_10403524	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300018054\|Ga0184621_10218107	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Eisenbacteria → Candidatus Eisenbacteria bacterium	683	Open in IMG/M
3300018431\|Ga0066655_10143807	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1406	Open in IMG/M
3300018433\|Ga0066667_10322858	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1213	Open in IMG/M
3300019279\|Ga0184642_1400491	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	560	Open in IMG/M
3300022195\|Ga0222625_1222871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	730	Open in IMG/M
3300022195\|Ga0222625_1367517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300022195\|Ga0222625_1367517	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	792	Open in IMG/M
3300024055\|Ga0247794_10268286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	568	Open in IMG/M
3300025910\|Ga0207684_11218817	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	622	Open in IMG/M
3300025922\|Ga0207646_10071982	All Organisms → cellular organisms → Bacteria	3088	Open in IMG/M
3300025922\|Ga0207646_10192423	All Organisms → cellular organisms → Bacteria	1842	Open in IMG/M
3300025922\|Ga0207646_10502838	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1092	Open in IMG/M
3300026121\|Ga0207683_11616854	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300027821\|Ga0209811_10006483	All Organisms → cellular organisms → Bacteria	3755	Open in IMG/M
3300027882\|Ga0209590_10095456	All Organisms → cellular organisms → Bacteria	1766	Open in IMG/M
3300028715\|Ga0307313_10238808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	565	Open in IMG/M
3300028716\|Ga0307311_10170550	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	631	Open in IMG/M
3300028799\|Ga0307284_10266150	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	684	Open in IMG/M
3300028807\|Ga0307305_10094662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1380	Open in IMG/M
3300028811\|Ga0307292_10088968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1203	Open in IMG/M
3300028824\|Ga0307310_10520074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	601	Open in IMG/M
3300028878\|Ga0307278_10243823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	798	Open in IMG/M
3300028880\|Ga0307300_10285960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	555	Open in IMG/M
3300028884\|Ga0307308_10127917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300028884\|Ga0307308_10127917	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1215	Open in IMG/M
3300028885\|Ga0307304_10230600	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	801	Open in IMG/M
3300030993\|Ga0308190_1126757	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	586	Open in IMG/M
3300031170\|Ga0307498_10000720	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4520	Open in IMG/M
3300031421\|Ga0308194_10233113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	610	Open in IMG/M
3300031421\|Ga0308194_10362876	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	84.82%
Host-Associated	Host-Associated	15.18%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	78.57%
Plants	Host-Associated → Plants	15.18%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	77.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Freshwater	Environmental → Aquatic → Freshwater	4.46%
Sediment	Environmental → Aquatic → Sediment	1.79%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	56.25%
Loam	Environmental → Terrestrial → Soil → Loam	21.43%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Sediment	Environmental → Aquatic → Freshwater → Sediment	3.57%
Soil	Host-Associated → Plants → Rhizosphere → Soil	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Soil	Host-Associated → Plants → Rhizoplane → Soil	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	37.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	9.82%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	5.36%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	3.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	3.57%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Soil → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.07%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	16.07%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	12.50%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	5.36%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.57%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000033	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001537	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A20-65 cm-11A)- 1 week illumina	Environmental	Open in IMG/M
3300001538	Permafrost active layer microbial communities from McGill Arctic Research Station, Canada - (A10-PF 4A)- 1 week illumina	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005454	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136	Environmental	Open in IMG/M
3300005456	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005471	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG	Environmental	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005614	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010039	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot56	Environmental	Open in IMG/M
3300010147	Soil microbial communities from California, USA to study soil gas exchange rates - BB-CA-RED metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012353	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012355	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_113_16 metaG	Environmental	Open in IMG/M
3300012358	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_100_16 metaG	Environmental	Open in IMG/M
3300012360	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_113_16 metaG	Environmental	Open in IMG/M
3300012406	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014058	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0.25M	Environmental	Open in IMG/M
3300015264	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026121	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027821	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028715	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_203	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028811	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_149	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028878	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_117	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300028885	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_185	Environmental	Open in IMG/M
3300030993	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_185 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
ICChiseqgaiiDRAFT_22339312	3300000033	Soil	MNSLNSRSSLGAHESFVDWDELSALDRIVAVYQAGTNVVLVETRDNREIRITAWFDRHEGRYVAEFERRCTISTGGQQLRVWTQTPAYARCVADDLIGCLEAAVLEVDRLPVY*
JGI10216J12902_1094708492	3300000956	Soil	MSSPAPSSDLGAPESYVDWDELSSLDQVATIYQVGTNTVVLETNDNREVRITAWFDRRSGQYVADFERRCTATSGGQQVRVWAQTSAYARCVSDDLVGCLEAAILAVDRLHVY*
JGI10216J12902_1101545172	3300000956	Soil	MSSTDPRSVLETGQSFVDWDELSSLDRVVAIRQAGPNILLVETRDNREVRITAWFERHTGRYAAEFEKRTTITSGGQQVRVWAQTPAYAKCVADDLVGCLEAAVLEVDRPVY*
A2065W1_100389352	3300001537	Permafrost	MSSLDPRSHVVARESFVDWDDLSGLDKIAAIYQVGTNTIVVETTEGREIKITAWFDRRTGKYVADFEKRCAMGSGQQLRVWAHTPAYARCVAEDLVGCFEEAILAVDRVPVY*
A10PFW1_116016524	3300001538	Permafrost	MSTPWSDVVTRESYVDWEDLSGLDKIAAIYQVGTNTVVVETTEGREVKITAWFDRRTGEYVADFEKRCAMGSPGQQLRVWAHTPAYARCASDDLVGCLEAAILAVDRLSVY*
C688J35102_1201220862	3300002568	Soil	MSSPDPRSDLGTHQSFVDWDELSGLGRVVAIYQAGTNILRVETQDNREIRITAWFDRHVGRYVAEFEKRTAITSGSLQLRVWAQTPAYAKCVADDLVSCLEAAILEVDRRVY*
C688J35102_1207862882	3300002568	Soil	MSSPDPRSGRDTHQSFVDWDELSGLDRVVAIQQAGMNVLRVETRDNREIRITAWFDRHVGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVSCLEAAVLEVDRPVF*
Ga0062593_1007225442	3300004114	Soil	MSSPAPSSDLGARESYVDWDELASLDQVATIYEVGANTVVLETNDSREIRITAWFDRRSGQYVADFERRCTATSGGQQVRVWAQTTAYERCVSDDLVGCLEAAILAVDRLHVY*
Ga0062590_1025747461	3300004157	Soil	HQSFVDWDELSGLDRIVAIRQAGPNMLLVETRDNREVRITAWFERHTGRYVAEFEKRTSVTSGGQQVRVWAQTPAYSKCVADDLVGCLEAAVIEVDRPVY*
Ga0062595_1001125222	3300004479	Soil	MSSPAPSSDLGARESYVDWDELASLDQVATIYQVGANTVVLETNDSREIRITAWFDRRSGQYVADFERRCTATSGGQQVRVWAQTTAYERCVSDDLVGCLEAAILAVDRLHVY*
Ga0062595_1006871332	3300004479	Soil	MSSPVPPSDLFARESYVDWDDLAGLDKIAVIYQVGTNTIVVETTEGREIKITAWFDRRTGEYVADFEKRCSVGSGGQQLRVWAHTPAYARCASDDLIGCLEAAILAVDRLSVY*
Ga0062594_1006825331	3300005093	Soil	MKRMSSLDPRSTVDSFQSFVDWDELSGLDRIVSIRQAGPNLMLLETRDNREVRVTAWFDRRTGKYVAEFERRCTVASGGQQLRVWAQTPVYARCVADDLVGCLEAAVLEVDRLPVY*
Ga0062594_1021938862	3300005093	Soil	MSSPIPSTDLSRDSYVDWDELSGLDQVVRIYQVGTNVVVLETNDSREVRITAWFDRRSGEYVADFERRCNMDSGGQKVRVWAQTPVYARCVADDLVG
Ga0066671_102268852	3300005184	Soil	MSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGGQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY*
Ga0070683_1010615181	3300005329	Corn Rhizosphere	FVDWDELSGLDRIVAIRQAGPNMLLVETRDNREVRITAWFERHTGRYVAEFEKRTSVTSGGQQVRVWAQTPAYAKCVADDLVGCLEAAVIEVDRPVY*
Ga0066388_1001031462	3300005332	Tropical Forest Soil	MSSLDPRSAVGSHESFVDWDELSGLDRIVSIQQAGTNVILLETRDNREVRVTAWFDRRTGKYVADFERRCTVSGGGQQLRVWAQTPAYARCISDDLTGCLEAAVLEVDRLPVY*
Ga0066388_1011813821	3300005332	Tropical Forest Soil	MSSLDPRSAVGTHESFVDWDELSGLDRIVSVQQAGTNVVLLETRDNREVRVTAWFDRRTGKYVADFERRCTVSSGGQQLRVWAQTPAYARCVSDDLAGCLEAAVLAV
Ga0066388_1024415111	3300005332	Tropical Forest Soil	SPVSSGDLPAPEASLDWDDLSALDRIVAIYQVGANTIVAETTEGREIRVTALFDRRGGQYVADFERRCVVMSDGKKMRVWAQTTAYPPCTAADLAGCLEAAILEVDRMPVY*
Ga0066388_1063359912	3300005332	Tropical Forest Soil	MASLDSRSTQRETFVDWDELSGLDRVSSIRQAGPNVVLVETRDSREVKITAWFDRTTGHYVADFERRMKITTGGQQVKVWAQTPAYARCVADDLIGCLEAA
Ga0066388_1078289501	3300005332	Tropical Forest Soil	MSSPDPRSTVSGSESFVDWDELSGLDRITSIRQAGTNVVLLETRDGREVKVTAWFDRGAGRYVAEFERRTNIGNGGQQVRVWAQTPAYTRCVGDDLIGCLE
Ga0070689_1011103932	3300005340	Switchgrass Rhizosphere	MSSLDPRSDLGGHQSFVDWDELSGLDRVVAIRQAGPNILLVETKDGREVRITAWFERHTGRYVAEFDKLTTITNGGQKLRVWALTPAYAKCVSDDLVSCLEAAILEVDRPVY*
Ga0070708_1004998951	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	VTRESYVDWDELSGLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAVAIGGQQVRVWAQTPAYARCVSDDL
Ga0066687_101170841	3300005454	Soil	MSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGAQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY*
Ga0070678_1007413811	3300005456	Miscanthus Rhizosphere	EPKPCDAASKGRGGLNVRGAGYFQSGLMSSLDPRSNATTHQSFVDWDELSGLDRVVAIRQAGPNMLLVETKDGREVRITAWFERHTGRYIAEFDKLMTINNGGQQLRVWALTPAYAKCVSDDLVSCLEAAILEVDKPVY*
Ga0070706_1010523841	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	VTRESYVDWDELSGLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAVTIGGQQVRVWAQTPAYARCVSDDLVGCLEEAIIAVDR
Ga0070707_1002413382	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MTPSSDPLTRESYVDWDELSGLDKVVTIYQVGTNMVVLETNEGREVRITAWFDRRTGQYVADFERRTAMSSGGQQVRVWAHTPAYARCVSDDLVGCLEAAIIAVDRLHVY*
Ga0070707_1008239612	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	VRKKGDMSSPLSSSDHVTRESYVDWDELSGLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAVTIGGQQVRVWAQTPAYARCVSDDLVGCLEEAIVAVDRLHVY*
Ga0070707_1021230801	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVDPRTDLLSQDSYVDWDELSGLDKVEAIYQIGMNTIVIETTEGREVKVTAWFDRRTGEYVADFEKRCSVGSGGQQLRVWAHTPAYARCASDDLVGCLEAAILAVDRLSVY*
Ga0070698_1005599362	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSSLTPSGDPLTRESYVDWDELAGLDKIVTIYQVGTNMVVLETNEGREVRITAWFDRRTGQYVADFERRTKMTSGGQQVRVWAHTPAYARCASDDLVGCLEAAIIAVDRMNVY*
Ga0070698_1012716411	3300005471	Corn, Switchgrass And Miscanthus Rhizosphere	MSTVDPRTDLLSRDSYVDWDELSGLDKVAVIYQIGTNTIVIETTEGREVKVTAWFDRRTGEYVADFEKRCSVGSGGQQLRVWAHTPAYARCASDDLVGCLEAAILAVDRLSVY*
Ga0073909_100212362	3300005526	Surface Soil	MSSPAPSSDLGARESYVDWDELSGLDQVVTIYQVGVNTVVLETSDSREVRITALFDRRSGQYVADFERRCTVTSGGQQVRVWAQTTAYAPSPSVSDDLVGCLEAAIVAVDRLHVY*
Ga0073909_106063921	3300005526	Surface Soil	DPETLTPRLLQAKFTVKHPTQWVSLAERMSSPDPRSDIGTHQSLVDWDELSGLDRVVAIHQAGTNVLRVETRDNREVRITAWFERHTGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVGCLEAAVIEVDRPVY*
Ga0070704_1022875782	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	SGLDKVEAIYQIGMNTIVIETTEGREVKVTAWFDRRTGEYVADFEKRCSVGSGGQQLRVWAHTPAYARCASDDLVGCLEAAILAVDRLSVY*
Ga0066654_107403291	3300005587	Soil	AERMSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGGQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY*
Ga0068856_1009905661	3300005614	Corn Rhizosphere	SLVDWDELAGLDRVVAIHQAGANILRVETRDNREVRITAWFERHSGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVGCLEAAVIEVDRPVY*
Ga0066903_1001822932	3300005764	Tropical Forest Soil	MSSPDPRSAVGTHESFVDWDELSGLDRIVSIQQAGTNVILLETRDNREVRVTAWFDRRTGKYVADFERRCTVSSGGQQLRVWAQTPAYARCASDDLIGCLEAAVVAVDRLPVY*
Ga0066652_1008322001	3300006046	Soil	MSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDNREVRITAWFDRHTGRYVAEFEKLTAVTSGAHQFRVWAQTPAYAKCVADDLVSCLEAAVLEVDRPVY*
Ga0066652_1009439892	3300006046	Soil	MHQSYVDWDELSGLDRIVAIHQAGTNVLRVDTRDNREIRITAWFDRHTGRYVADFEKRTAITSGGQQLRVWAQTPAYAKCVADDLVSCLEAAILEVDRPVY*
Ga0070715_106133591	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	SLGMAKKRMSSPDPQSTLRQSYVDWDELSGLDRIAAIRQAGPNVLLVETRDSREIKITAWFDRSAGSYIAEFERLMKITIGDQHVRVWAQTPAYARCVADDLTGCLEAAVLEVDRLPVY*
Ga0070712_1014094091	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MSSPDPQSTLRQSYVDWDELSGLDRIAAIRQAGPNVLLVETRDSREIKITAWFDRSAGSYIAEFERLMKITIGDQHVRVWAQTPAYARCVADDLTGCLEAAVLEVDRLPVY*
Ga0066710_1019519511	3300009012	Grasslands Soil	DHVRGLDLLGMKQTMSSPVPPSDLVTRESYVDWDDLAGLDKIVAIYQIGANTVVLETTEGREVRITAWFDRRTGQYVADFERRSTLTIGGQQFRVWAQTPAYARCVSDDLVGCLEEAILAVDRVPVY
Ga0099827_100222785	3300009090	Vadose Zone Soil	MSSPTPRSDLSREWYVDWDDLAGLDKVVAIYEVGEKSVVVETSEGREIRITAWLDRRADQYVADFERRSVVTSGGQHFRVWAQSPAYARCVADNLHDCLKAAVLAVDRVTVY*
Ga0105245_113423861	3300009098	Miscanthus Rhizosphere	MSSLDPRSNATTHQSFVDWDELSGLDRVVAIRQAGPNMLLVETKDGREVRITAWFERHTGRYIAEFDKLMTINNGGQQLRVWALTPAYAKCVSDDLVSCLEAAILEVDKPVY*
Ga0105245_121251902	3300009098	Miscanthus Rhizosphere	MSSPFPSTDLTRDSYVDWDELSGLDQVVRIYQVGTNTVVLETNDSREVRITAWFDRRSGQYVADFERRCNVESGGQKVRVWAQTTAYARCVADDL
Ga0105243_111938811	3300009148	Miscanthus Rhizosphere	MSSPFPSTDLTRDSYVDWDELSGLDQVVTIYQVGTNTVVLETHDNREVRITAWFDRRSGQYVADFERRCNVESGGQKVRVWAQTTAYARCVADDLVGCLEAAIVAVDRLHVY*
Ga0105242_107000722	3300009176	Miscanthus Rhizosphere	MSSHIPSTDLSRDSYVDWDELSGLDQVVRIYQVGTNVVVLETNDSREIRITAWFDRRSGEYVADFERRCNMDSGGQKVRVWAQTPVYARCVADDLVGCLEAAIVAVDRLHVY*
Ga0126309_101097983	3300010039	Serpentine Soil	DLRPYDSFVDWQELSGLDRVTAIYGVGDNAIVVDTTEGREVRITAWLDHRTGQYVADFERRGAVTSGGHQLRVWAQTQAYPRCVGADVAGCLEAAILEVDRMPVY*
Ga0126319_15144911	3300010147	Soil	SPAPSSDLGARESYVDWDELSGFDQVATIYQVGTNTVVLETNDSREVRITAWFDRRSGHYVADFERRCNVTSGGQQVRVWAQTTAYARCVADDLVGCLEAAIVAVDRLHVY*
Ga0138514_1000122202	3300011003	Soil	MSSPAPPSGLLTRESYVDWDDLSGLDKIVAIYQVGDNTVVVETSEGREVRITAWLDRGTRRYVADFERRTALPGSQLKVWAHTPAYARCAADDLLGCLEAAILAVDRVPVY*
Ga0137374_100876663	3300012204	Vadose Zone Soil	MGKKLTAHELTGPPSDLAARESYVDWDELAGLDKIVTLYQVGANTVIVETCEGREVRITARFDRRNGQYVADFERRSAVSTGGTKLLIWAQSPAYARCVADDLVGCLEAAIVAVDRMHVY
Ga0137374_100890483	3300012204	Vadose Zone Soil	MSSPVPPSDLAARESYVDWDELAGLDKIVTLYQVGTNTVIVETCEGREVRITGRFDRRNGQYVADFERRTTVSNGGTKLLVWAQSPAYARCVADDLVTCLEAAIVAVDRMHVY*
Ga0137374_100915522	3300012204	Vadose Zone Soil	MSSPVPSTELLPYETSVDWDDLSGLDKIVAIYQIGANTVVVETSEGREVRITGWFDRRTGRYVADFERRSTLTSGGQKFRVWAHTPAYARCVADDLVGCLEAAILAVDRVPVY*
Ga0137376_103992232	3300012208	Vadose Zone Soil	MSSPIHQSDLSSRELYVDWADLAGLDRIVAIYEVGEKSVVVETNEGREIRITAWLDRRADHYIADFERRSVVTSGTQRFHVWAQSPAYARCVADNLQGCLRAAILAVDRVTVY*
Ga0137379_112144021	3300012209	Vadose Zone Soil	MSSLTPWSDLSSHEWYVDWDDLAGLDRIVAIYEVGEKSVVVETSEGREIRITAWLDRRADQYVADFERRSVVTNGTQHFHVWAQSPAYARCVADNLQACLRAAVLAVDRVTVY*
Ga0150985_1112876932	3300012212	Avena Fatua Rhizosphere	FRSSSPDPWSDLGTHQSFVDWDELSGLDRVVAIHQAGPNILRVETRDNREIRITAWFDRHAGRYVAEFEKRTAITSGGQQLRVWAQTPAYAKCVADDLVGCLEAAILEVDRPVY*
Ga0150985_1161531592	3300012212	Avena Fatua Rhizosphere	SPDSRSDLGTHQSFVDWDELSGLDRVVAIHQAGTNILRVETRDNREIRITAWFDRHAGRYVAEFEKRTAITSGGQQLRVWAQTPAYAKCVGDDLVGCLEAAILEVDRPVY*
Ga0150985_1228909942	3300012212	Avena Fatua Rhizosphere	LDPRSVIGSHESFVDWDELSGLDRVSAIHQAGPNVLLIETKDSREIRITAWFNRQTGRYKADYEKRSTISSGGQQLRVWAQTPAYARCVADDLVGCLEAAVLEVDRHAVY*
Ga0137372_100007639	3300012350	Vadose Zone Soil	MTSPVPPGDLAAHESYVDWDQLSGLDKIVTIYQVGTNQVVLETNEGREVRITAWFDRRNGQYVADFERRCAVTIGGQQVRVWSHTPAYARCVADDLVACLEAAILAVDRLHVY*
Ga0137372_105803192	3300012350	Vadose Zone Soil	MSSPAPPSALGAHESSVDWDDLAGLDKIVAIYDVAVNTIVVETSEGRHVRITAWFDRRKGEYVADFERRSKVTSGGQQLRVWSQTPAYARCVAPDLAGCLEAAILAVDRVPVY*
Ga0137367_100012713	3300012353	Vadose Zone Soil	MSSPVPPTELLPYETSVDWDDLSGLDKIVAIYQIGANTVVVETSEGREVRITGWFDRRTGRYVADFERRSTLTSGGQKFRVWAHTPAYARCVADDLVGCLEAAILAVDRVPVY*
Ga0137367_100324634	3300012353	Vadose Zone Soil	MSSPVPPSDLAARESYVDWDELAGLDKIVTLYQVGANTVIVETCEGREVRITARFDRRNGQYVADFERRSAVSTGGTKLLVWAQSPAYARCVADDLVGCLEAAIVAVDRMHVY*
Ga0137366_109314741	3300012354	Vadose Zone Soil	SSFFGFPLALLRERRIGFAGQGLEDSPRWVRNGQHMSSPVPPSDLAARESYVDWDELAGLDKIVTLYQVGTNTVIVETCEGREVRITGRFDRRNGQYVADFERRTTVSNGGTKLLVWAQSPAYARCVADDLVGCLEAAIVAVDRMHVY*
Ga0137369_102223443	3300012355	Vadose Zone Soil	ELAGLDKIVTLYQVGANTVIVETCEGREVRITARFDRRNGQYVADFERRSAVSTGGTKLLIWAQSPAYARCVADDLVGCLEAAIVAVDRMHVY*
Ga0137368_100603734	3300012358	Vadose Zone Soil	MSSPVPPSDLAARESYVDWDELAGLDKIVTLYQVGANTVIVETCEGREVRITARFDRRNGQYVADFERRSAVSTGGTKLLIWAQSPAYARCVADDLVGCLEAAIVAVDRMHVY*
Ga0137368_105841142	3300012358	Vadose Zone Soil	LLSRETFVDWDDLSGLDKITTIFQIGANTVVVETAEGREVRITAWFDRQTGRYVADFERRSTLTNGGTQFRVWAHTPAYARCVADDLVSCLEAAILAVDRVPVY*
Ga0137375_101354042	3300012360	Vadose Zone Soil	MSSPVPPTELLARETFVDWDDLSGLDKITTIFQIGANTVVVETAEGREVRITAWFDRQNGRYVADFERRSTLTNGGTQFRVWAHTPAYARCVADDLVSCLEAAILAVDRVPVY*
Ga0137375_103342673	3300012360	Vadose Zone Soil	QMSSPVPPTELLPYETSVDWDDLSGLDKIVAIYQIGANTVVVETSEGREVRITGWFDRRTGRYVADFERRSTLTSGGQKFRVWAHTPAYARCVADDLVGCLEAAILAVDRVPVY*
Ga0134053_10100501	3300012406	Grasslands Soil	LGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGGQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY*
Ga0150984_1010806112	3300012469	Avena Fatua Rhizosphere	SLSSLDPGSVIGSHESFVDWDELSGLDRVSAIHQAGPNVLLIETKDSREIRITAWFNRQTGRYKADYEKRSTISSGGQQLRVWAQTPAYARCVADDLVGCLEAAVLEVDRHAVY*
Ga0150984_1017333133	3300012469	Avena Fatua Rhizosphere	MSSPDPRSGRDTHQSFVDWDELSGLDRVVAIQQAGMNILRVETRDNREIRITAWFDRHVGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVSCLEAAVLEVDRPVF*
Ga0150984_1037765794	3300012469	Avena Fatua Rhizosphere	FRSSSPDPRSDLGTHQSFVDWDELSGLGRVVAIYQAGTNILRVETQDNREIRITAWFDRHVGRYVAEFEKRTAITSGSLQLRVWAQTPAYAKCVGDDLVSCLEAAILEVDRRVY*
Ga0150984_1162978841	3300012469	Avena Fatua Rhizosphere	SPDPWSDLGTHQSFVDWDELSGLDRVVAIHQAGPNILRVETRDNREIRITAWFDRHAGRYVAEFEKRTAITSGGQQLRVWAQTPAYAKCVADDLVGCLEAAILEVDRPVY*
Ga0164301_113019511	3300012960	Soil	EQSGLDRVVAIHQAGTNVLRVETRDNREVRITAWYERHTGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVGCLEAAVIEVDRPVY*
Ga0164302_112457181	3300012961	Soil	MSSLDPRSEVATHQSFVDWDELSGLDRVVAIRQAGPNILLVETKDGREVRITAWFERHTGRYVAEFDKLTTITNGGQKLRVWALTPAYAKCVSDDLVSCLEAAILEVDRPVY*
Ga0164307_115058861	3300012987	Soil	VHESFVDWDELSGLDRISSIRQAGTNVVVLETRDGRELKITAWFDRGAGRYVADFERRTNIGSGGQQVRVWAQTPAYARCVADDLLGCLEAAILEVDRL
Ga0157378_130207892	3300013297	Miscanthus Rhizosphere	DELSGLDRVVAIRQAGPNMLLVETKDGREVRITAWFERHTGRYIAEFDKLMTVNNGGQQLRVWALTPAYAKCVSDDLVSCLEAAILEVDKPVY*
Ga0120149_12038262	3300014058	Permafrost	MSTPWSDVVTRESYVDWDDLSGLDKIAAIYQVDANTIVVETTEGREIKITAWFDRRTGKYVADFEKRCAMGSGQQLRVWAHTPAYARCVAEDLVGCFEEAILAVDRVPVYC
Ga0137403_116118561	3300015264	Vadose Zone Soil	GLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAMTSGGQQVRVWAQTPAYARCVADDLVGCLEEAIVAVDRLNVY*
Ga0132257_1007603011	3300015373	Arabidopsis Rhizosphere	MSSPDPRSDIGTHQSLVDWDELSGLDRVVAIHQAGTNVLRVETRDNREVRITAWFERHTGRYVAEFEKRTTIASGGQQLRVWAQTPAYAKCVADDLVGCLEAAVIEVD
Ga0132255_1020340841	3300015374	Arabidopsis Rhizosphere	MSSPDPRSDIGTHQSLVDWDELSGLDRVVAIHQAGTNVLRVETRDNREVRITAWFERHTGRYVAEFEKRTTITSGGQQLRVWAQTPAYAKCVADDLVGCLEAAVIEVDRPVY*
Ga0134074_13604281	3300017657	Grasslands Soil	MSSPVSPGDLPAPESSLDWDDLSALDRIVAIYQVGANTVVAETIEGREIRVTAMFDRRAGRYVADFERRCAVMGDGTKIRVWAQTNAYPPCASADLVSCLEAA
Ga0184605_104035241	3300018027	Groundwater Sediment	MSAPLSRSDLSSRELYVDWADLEGLDRIVAIYEVGEQSVVVETNEGREIRITAWLDRRADQYVADFERRSVVTNGTQRLHVWAQSPAYARCVADNLQGCLRAAVVAVDRVAVY
Ga0184621_102181072	3300018054	Groundwater Sediment	MSSPVPPSDLVARESYVDWDELSGLDKIVTIYQVGTNTVVVETNEGREVRITAWFDRRTGEYVADFERRSAVTIGGQQVRVWAHTPAYARC
Ga0066655_101438072	3300018431	Grasslands Soil	MSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRIETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGGQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY
Ga0066667_103228581	3300018433	Grasslands Soil	EAERMSSHDPRSRLGTHQSFVDWDELSGLDRILAIHQAGPNVLRVETRDSREVRITAWFDRHTGRYVAEFEKRTAITSGGQQLRVWAQTRAYAKCVADDLVSCLEAAVLEVDRPIY
Ga0184642_14004911	3300019279	Groundwater Sediment	SPVPPSDLVARESYVDWDELSGLDKIVTIYQVGTNTVVVETNEGREVRITAWFDRRTGEYVADFERRSVVTSGGQQVRVWAHTPAYARCASDDLLDCLETAIVAVDRLHVY
Ga0222625_12228712	3300022195	Groundwater Sediment	SPVPPSDLVARESYVDWDELSGLDKIVTIYQVGTNTVVVETNEGREVRITAWFDRRTGEYVADFERRSAVTIGGQQVRVWAHTPAYARCASDDLLDCLETAIVAVDRLHVY
Ga0222625_13675171	3300022195	Groundwater Sediment	PSGLLTRESYVDWDDLSGLDKIVAIYQIGDSTLVVETNEGREIRITAWLDRGTGQYVADFERRSALPGGGQLRVWAHTPAYARCVADDLLGCLEAAILAVDRVPVY
Ga0222625_13675172	3300022195	Groundwater Sediment	MSSPTPRSDLSSRESHVDWDDLAGLDKIVAIYEVGEKSVVVETNEGREIRITAWLNRRADHYIADFERRSVVTSGTQRFHVWAQSPAYARCVADNLQDCLRAAILAVDRVTVY
Ga0247794_102682861	3300024055	Soil	MSSLDPRSDLGGHQSFVDWDELSGLDRIVAIRQAGPNMLLVETRDNREVRITAWFERHTGRYVAEFEKRTSIASGGQQVRVWAQTPAYSKCVADDLVGCLEAAVIEVDRPVY
Ga0207684_112188172	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	SPGILIVARLEDSPRWVRKKGDMSSPLSSSDHVTRESYVDWDELSGLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAVTIGGQQVRVWAQTPAYARCVSDDLIGCLEEAIVAVDRLHVY
Ga0207646_100719822	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VTRESYVDWDELSGLDKIVAIYQVGTNTVVVETNEGREVRITAWFDRRAGQYVADFERRSAVTIGGQQVRVWAQTPAYARCVSDDLVGCLEEAIVAVDRLHVY
Ga0207646_101924232	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MTPSSDPLTRESYVDWDELSGLDKVVTIYQVGTNMVVLETNEGREVRITAWFDRRTGQYVADFERRTAMSSGGQQVRVWAHTPAYARCVSDDLVGCLEAAIIAVDRLHVY
Ga0207646_105028381	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	DRPVRSRSCRVRGFGLLGMKEAGMSTVDPRTDLLSQDSYVDWDELSGLDKVEAIYQIGMNTIVIETTEGREVKVTAWFDRRTGEYVADFEKRCSVGSGGQQLRVWAHTPAYARCASDDLVGCLEAAILAVDRLSVY
Ga0207683_116168541	3300026121	Miscanthus Rhizosphere	GREGLNVRRAGYVQSGLMSSLDPRSNATTHQSFVDWDELSGLDRVVAIRQAGPNMLLVETKDGREVRITAWFERHTGRYIAEFDKLMTINNGGQQLRVWALTPAYAKCVSDDLVSCLEAAILEVDKPVY
Ga0209811_100064834	3300027821	Surface Soil	MSSPAPSSDLGARESYVDWDELSGLDQVVTIYQVGVNTVVLETSDSREVRITALFDRRSGQYVADFERRCTVTSGGQQVRVWAQTTAYAPSPSVSDDLVGCLEAAIVAVDRLHVY
Ga0209590_100954563	3300027882	Vadose Zone Soil	YVDWDDLAGLDKVVAIYEVGEKSVVVETSEGREIRITAWLDRRADQYVADFERRSVVTSGGQHFRVWAQSPAYARCVADNLHDCLKAAVLAVDRVTVY
Ga0307313_102388081	3300028715	Soil	DWADLEGLDRIVAIYEVGQQSVVVETNEGPEIRITAWLDRRADQYVADFERRSVVTNGTQRLHVWAQSPAYARCVADNLQGCLRAAVVAVDRVAVY
Ga0307311_101705502	3300028716	Soil	LEGLDRIVAIYEVGQQSVVVETNEGREIRITAWLDRRADQYVADFERRSVVTNGTQRLHVWAQSPAYARCVADNLQGCLRAAVVAVDRVAVY
Ga0307284_102661501	3300028799	Soil	MSSLVPPSDLLARESYVDWDDLSGLDKIVAIYQVGDNCAVLETNEGREIRVTAWLDRRTRQYVADFERRGTLPGGGQLKVWAHTPAYPRCVADDLLGCLEAAILAVDRVPVY
Ga0307305_100946622	3300028807	Soil	MSSPAPPSGLLTRESYVDWDDLSGLDKIVAIYQIGDSTVVVETNEGREIRITAWLDRGTGQYVADFERRSALPGGGQLRVWAHTPAYARCVADDLLGCLEAAILAVDRVPVY
Ga0307292_100889681	3300028811	Soil	MSSPDPRSDLGTGQSFVDWDELSGLGKVVAIHQAGTNILRVETQDNREIRITAWFDRHVGRYVAEFEKRTAITSGSQQVRVWAQTPAYAKCVADDLVSCLEAAILEVDRRVY
Ga0307310_105200742	3300028824	Soil	MSSLVPPSDLLARESYVDWDDLSGLDKIVAIYQVGDSTVVVETNEGREIRITAWLDRGTGQYVADFERRSALPGGGQLRVWAHTPAYARCVADDLLGCLEAAILAVDRVPVY
Ga0307278_102438232	3300028878	Soil	MSSPVPPSDLVARESYVDWDELSGLDKIVTIYQVGTNTVVVETNEGREVRITAWFDRRTGEYVADFERRSAVTIGGQQVRVWAHTPAYARCASDDLLDCLETAIVAVDRLHVY
Ga0307300_102859601	3300028880	Soil	MSSLTPRSSLGAHESFVDWDELSGLDRIVAVYQAGTNVVLVETRDNREIRITAWFDRQHGRYVAEFERRGSISSGGQQLRVWTQTPAYARCVADDLIGCLEAAVLEVDRLPVY
Ga0307308_101279171	3300028884	Soil	GTSAAKPEPPAQRLENSAFWVVIDRPMSSPAPPSGLLTRESYVDWDDLSGLDKIVAIYQVGDNCAVLETNEGREIRVTAWLDRRTRQYVADFERRGTLPGGGQLKVWAHTPAYPRCVADDLLGCLEAAILAVDRVPVY
Ga0307308_101279172	3300028884	Soil	MSAPLSRSDLSSRELYVDWADLEGLDRIVAIYEVGQQSVVVETNEGREIRITAWLDRRADQYVADFERRSVVTNGTQRLHVWAQSPAYARCVADNLQGCLRAAVVAVDRVAVY
Ga0307304_102306002	3300028885	Soil	MSSSVPRNDLAARESYVDWDDLAGLDKIATIYQVGTNTIVVETSEGREVKITAWFDRRTGEYVADFEKRCAMSGGQQLRVWAHTPAYARCVADDLVGCLEAAILAVDRVAVY
Ga0308190_11267571	3300030993	Soil	LARESYIDWDDLSGLDKVAKIYQVGTNTIVVETTEGREIKITAWFDRGSGKYVADFERRSNVSSGGQQLRVWAHTPAYAQCVAEDLVGCLEAGILAVDRMSVY
Ga0307498_100007203	3300031170	Soil	MSSPAPFSDLGARESYLDWDELSGLDQVATIYQVGTNTVVLETNDSREIRITAWFDRRSGEYVADFERRCTATSGGQQVRVWAQTSAYARCVSDDLVGCLEAAIVAVDRLHVY
Ga0308194_102331132	3300031421	Soil	LVPPSDLLARESYVDWDDLSGLDKIVAIYQVGDNCAVLETNEGREIRVTAWLDRRTRQYVADFERRGTLPGGGQLKVWAHTPAYPRCVADDLLGCLEAAILAVDRVPVY
Ga0308194_103628761	3300031421	Soil	MSSPPPRSDLSSRESHVDWDDLAGLDKIATIYQVGTNTIVVETSEGREVKITAWFDRRTGEYVADFEKRCAMSGGQQLRVWAHTPAYARCVADDLVGCLEAAILAVDRVAVY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084765

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences