NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084692

Metagenome / Metatranscriptome Family F084692

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084692
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 107 residues
Representative Sequence MKKILTIAFVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK
Number of Associated Samples 78
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 87.50 %
% of genes near scaffold ends (potentially truncated) 23.21 %
% of genes from short scaffolds (< 2000 bps) 75.00 %
Associated GOLD sequencing projects 69
AlphaFold2 3D model prediction Yes
3D model pTM-score0.57

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (97.321 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil
(51.786 % of family members)
Environment Ontology (ENVO) Unclassified
(50.000 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(52.679 % of family members)


 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      

 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 16.18%    β-sheet: 28.68%    Coil/Unstructured: 55.15%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.57
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF027373HCDH_N 39.29
PF02518HATPase_c 8.93
PF05187ETF_QO 1.79
PF14827dCache_3 1.79
PF00486Trans_reg_C 0.89
PF13620CarboxypepD_reg 0.89
PF04028DUF374 0.89
PF00111Fer2 0.89
PF02754CCG 0.89
PF02738MoCoBD_1 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0240Glycerol-3-phosphate dehydrogenaseEnergy production and conversion [C] 39.29
COG0287Prephenate dehydrogenaseAmino acid transport and metabolism [E] 39.29
COG0677UDP-N-acetyl-D-mannosaminuronate dehydrogenaseCell wall/membrane/envelope biogenesis [M] 39.29
COG1004UDP-glucose 6-dehydrogenaseCell wall/membrane/envelope biogenesis [M] 39.29
COG12503-hydroxyacyl-CoA dehydrogenaseLipid transport and metabolism [I] 39.29
COG1748Saccharopine dehydrogenase, NADP-dependentAmino acid transport and metabolism [E] 39.29
COG20843-hydroxyisobutyrate dehydrogenase or related beta-hydroxyacid dehydrogenaseLipid transport and metabolism [I] 39.29
COG0644Dehydrogenase (flavoprotein)Energy production and conversion [C] 1.79
COG2440Ferredoxin-like protein FixXEnergy production and conversion [C] 1.79
COG0247Fe-S cluster-containing oxidoreductase, includes glycolate oxidase subunit GlcFEnergy production and conversion [C] 0.89
COG2048Heterodisulfide reductase, subunit BEnergy production and conversion [C] 0.89
COG2121Uncharacterized conserved protein, lysophospholipid acyltransferase (LPLAT) superfamilyFunction unknown [S] 0.89

 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.32 %
UnclassifiedrootN/A2.68 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2170459010|GIO7OMY02IYU0TAll Organisms → cellular organisms → Bacteria527Open in IMG/M
3300001593|JGI12635J15846_10024703All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis4872Open in IMG/M
3300001593|JGI12635J15846_10259480All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1110Open in IMG/M
3300002907|JGI25613J43889_10111912All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium695Open in IMG/M
3300004631|Ga0058899_12028302All Organisms → cellular organisms → Bacteria → Acidobacteria1214Open in IMG/M
3300005534|Ga0070735_10003561All Organisms → cellular organisms → Bacteria13584Open in IMG/M
3300006047|Ga0075024_100053477All Organisms → cellular organisms → Bacteria1692Open in IMG/M
3300006052|Ga0075029_100036761All Organisms → cellular organisms → Bacteria2799Open in IMG/M
3300006052|Ga0075029_101179975All Organisms → cellular organisms → Bacteria534Open in IMG/M
3300006059|Ga0075017_100220494All Organisms → cellular organisms → Bacteria1378Open in IMG/M
3300006059|Ga0075017_101220151All Organisms → cellular organisms → Bacteria589Open in IMG/M
3300006086|Ga0075019_10983188All Organisms → cellular organisms → Bacteria544Open in IMG/M
3300006102|Ga0075015_100278452All Organisms → cellular organisms → Bacteria914Open in IMG/M
3300006172|Ga0075018_10004934All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4713Open in IMG/M
3300006172|Ga0075018_10038193All Organisms → cellular organisms → Bacteria1951Open in IMG/M
3300006354|Ga0075021_10331663All Organisms → cellular organisms → Bacteria947Open in IMG/M
3300007788|Ga0099795_10019585All Organisms → cellular organisms → Bacteria → Acidobacteria2193Open in IMG/M
3300007788|Ga0099795_10612286All Organisms → cellular organisms → Bacteria519Open in IMG/M
3300009038|Ga0099829_10461393All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1053Open in IMG/M
3300009038|Ga0099829_11651241All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300009088|Ga0099830_10008373All Organisms → cellular organisms → Bacteria → Acidobacteria6182Open in IMG/M
3300009089|Ga0099828_10076910All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2840Open in IMG/M
3300009089|Ga0099828_11457078All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium604Open in IMG/M
3300009089|Ga0099828_11769511Not Available543Open in IMG/M
3300009090|Ga0099827_10004985All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae7895Open in IMG/M
3300009090|Ga0099827_10497145All Organisms → cellular organisms → Bacteria1048Open in IMG/M
3300009143|Ga0099792_10102314All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes1507Open in IMG/M
3300009143|Ga0099792_10875363All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium593Open in IMG/M
3300010159|Ga0099796_10011812All Organisms → cellular organisms → Bacteria → Acidobacteria2449Open in IMG/M
3300010159|Ga0099796_10126478All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium987Open in IMG/M
3300011120|Ga0150983_12813958All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300011120|Ga0150983_16492072All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300011120|Ga0150983_16691675All Organisms → cellular organisms → Bacteria507Open in IMG/M
3300011269|Ga0137392_10396676All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1145Open in IMG/M
3300011269|Ga0137392_10958338All Organisms → cellular organisms → Bacteria703Open in IMG/M
3300011269|Ga0137392_11457666All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium543Open in IMG/M
3300011270|Ga0137391_10009331All Organisms → cellular organisms → Bacteria7772Open in IMG/M
3300011271|Ga0137393_10004123All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis9493Open in IMG/M
3300011271|Ga0137393_10336805All Organisms → cellular organisms → Bacteria1288Open in IMG/M
3300011271|Ga0137393_11182620All Organisms → cellular organisms → Bacteria649Open in IMG/M
3300012096|Ga0137389_10065663All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2789Open in IMG/M
3300012096|Ga0137389_11133045All Organisms → cellular organisms → Bacteria670Open in IMG/M
3300012189|Ga0137388_10228894Not Available1686Open in IMG/M
3300012189|Ga0137388_10318782All Organisms → cellular organisms → Bacteria → Acidobacteria1428Open in IMG/M
3300012202|Ga0137363_10403932All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1138Open in IMG/M
3300012203|Ga0137399_10548644All Organisms → cellular organisms → Bacteria971Open in IMG/M
3300012203|Ga0137399_10657177All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium882Open in IMG/M
3300012206|Ga0137380_10667503All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium904Open in IMG/M
3300012207|Ga0137381_10214929All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1668Open in IMG/M
3300012210|Ga0137378_10306218All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1478Open in IMG/M
3300012210|Ga0137378_11526718All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium578Open in IMG/M
3300012211|Ga0137377_11159571All Organisms → cellular organisms → Bacteria702Open in IMG/M
3300012349|Ga0137387_10000926All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae13692Open in IMG/M
3300012351|Ga0137386_10241584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1298Open in IMG/M
3300012359|Ga0137385_10760426Not Available807Open in IMG/M
3300012361|Ga0137360_10727779All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium852Open in IMG/M
3300012363|Ga0137390_10851137All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium868Open in IMG/M
3300012683|Ga0137398_10270446All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1136Open in IMG/M
3300012683|Ga0137398_10739532All Organisms → cellular organisms → Bacteria685Open in IMG/M
3300012917|Ga0137395_10042194All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2825Open in IMG/M
3300012923|Ga0137359_10338864All Organisms → cellular organisms → Bacteria1337Open in IMG/M
3300012924|Ga0137413_11144779All Organisms → cellular organisms → Bacteria618Open in IMG/M
3300012925|Ga0137419_10079881All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2208Open in IMG/M
3300012927|Ga0137416_10794064All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300012944|Ga0137410_11574249All Organisms → cellular organisms → Bacteria575Open in IMG/M
3300018006|Ga0187804_10320335All Organisms → cellular organisms → Bacteria678Open in IMG/M
3300020580|Ga0210403_10037486All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3876Open in IMG/M
3300020580|Ga0210403_10067965All Organisms → cellular organisms → Bacteria2862Open in IMG/M
3300020580|Ga0210403_10386524All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1143Open in IMG/M
3300021086|Ga0179596_10011873All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2890Open in IMG/M
3300021086|Ga0179596_10059525All Organisms → cellular organisms → Bacteria1619Open in IMG/M
3300021170|Ga0210400_10002671All Organisms → cellular organisms → Bacteria16290Open in IMG/M
3300021170|Ga0210400_10032611All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae4044Open in IMG/M
3300021476|Ga0187846_10024067All Organisms → cellular organisms → Bacteria2801Open in IMG/M
3300021858|Ga0213852_1543433All Organisms → cellular organisms → Bacteria593Open in IMG/M
3300022506|Ga0242648_1030730All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300022724|Ga0242665_10039100All Organisms → cellular organisms → Bacteria → Acidobacteria1211Open in IMG/M
3300025324|Ga0209640_11249769All Organisms → cellular organisms → Bacteria554Open in IMG/M
3300026320|Ga0209131_1022852All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae3737Open in IMG/M
3300026320|Ga0209131_1167318All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1085Open in IMG/M
3300026551|Ga0209648_10596919All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium608Open in IMG/M
3300026557|Ga0179587_10042782All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae2575Open in IMG/M
3300026557|Ga0179587_10740767All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium648Open in IMG/M
3300027512|Ga0209179_1067930All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium778Open in IMG/M
3300027651|Ga0209217_1018746All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2228Open in IMG/M
3300027660|Ga0209736_1043464All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1296Open in IMG/M
3300027678|Ga0209011_1030735All Organisms → cellular organisms → Bacteria1706Open in IMG/M
3300027846|Ga0209180_10481294All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium697Open in IMG/M
3300027875|Ga0209283_10084023All Organisms → cellular organisms → Bacteria → Acidobacteria2067Open in IMG/M
3300027875|Ga0209283_10447816All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium837Open in IMG/M
3300027882|Ga0209590_10198935All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1266Open in IMG/M
3300027882|Ga0209590_10214173All Organisms → cellular organisms → Bacteria → Acidobacteria1221Open in IMG/M
3300027894|Ga0209068_10152231All Organisms → cellular organisms → Bacteria1252Open in IMG/M
3300027894|Ga0209068_10228326All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1030Open in IMG/M
3300027903|Ga0209488_10471761All Organisms → cellular organisms → Bacteria922Open in IMG/M
3300027910|Ga0209583_10047321All Organisms → cellular organisms → Bacteria1502Open in IMG/M
3300027911|Ga0209698_10086764All Organisms → cellular organisms → Bacteria2644Open in IMG/M
3300027911|Ga0209698_10282879All Organisms → cellular organisms → Bacteria1317Open in IMG/M
3300027986|Ga0209168_10004606All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae9095Open in IMG/M
3300028047|Ga0209526_10275828All Organisms → cellular organisms → Bacteria1144Open in IMG/M
3300028536|Ga0137415_10360229All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1258Open in IMG/M
3300028800|Ga0265338_10264815All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae1262Open in IMG/M
3300031231|Ga0170824_103764772All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium792Open in IMG/M
3300031720|Ga0307469_11105771All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium745Open in IMG/M
3300031820|Ga0307473_10326427All Organisms → cellular organisms → Bacteria977Open in IMG/M
3300031949|Ga0214473_10743322All Organisms → cellular organisms → Bacteria → Acidobacteria1064Open in IMG/M
3300031962|Ga0307479_10403605All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1351Open in IMG/M
3300031962|Ga0307479_11768349All Organisms → cellular organisms → Bacteria571Open in IMG/M
3300031962|Ga0307479_11803081All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium564Open in IMG/M
3300032174|Ga0307470_10325390All Organisms → cellular organisms → Bacteria1055Open in IMG/M
3300032770|Ga0335085_10004266All Organisms → cellular organisms → Bacteria23840Open in IMG/M
3300032954|Ga0335083_10180781All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter1953Open in IMG/M


 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil51.79%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds13.39%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil8.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil6.25%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil5.36%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil3.57%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.79%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds0.89%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.89%
Grass SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Uranium Contaminated → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Loam → Unclassified → Soil0.89%
BiofilmEnvironmental → Terrestrial → Cave → Unclassified → Unclassified → Biofilm0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2170459010Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)EnvironmentalOpen in IMG/M
3300001593Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2EnvironmentalOpen in IMG/M
3300002907Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cmEnvironmentalOpen in IMG/M
3300004631Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF234 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300005534Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1EnvironmentalOpen in IMG/M
3300006047Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013EnvironmentalOpen in IMG/M
3300006052Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013EnvironmentalOpen in IMG/M
3300006059Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012EnvironmentalOpen in IMG/M
3300006086Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013EnvironmentalOpen in IMG/M
3300006102Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013EnvironmentalOpen in IMG/M
3300006172Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014EnvironmentalOpen in IMG/M
3300006354Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012EnvironmentalOpen in IMG/M
3300007788Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009088Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaGEnvironmentalOpen in IMG/M
3300009089Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaGEnvironmentalOpen in IMG/M
3300009090Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaGEnvironmentalOpen in IMG/M
3300009143Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2EnvironmentalOpen in IMG/M
3300010159Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3EnvironmentalOpen in IMG/M
3300011120Combined assembly of Microbial Forest Soil metaTEnvironmentalOpen in IMG/M
3300011269Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaGEnvironmentalOpen in IMG/M
3300011270Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaGEnvironmentalOpen in IMG/M
3300011271Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaGEnvironmentalOpen in IMG/M
3300012096Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaGEnvironmentalOpen in IMG/M
3300012189Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaGEnvironmentalOpen in IMG/M
3300012202Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaGEnvironmentalOpen in IMG/M
3300012203Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz3.16 metaGEnvironmentalOpen in IMG/M
3300012206Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaGEnvironmentalOpen in IMG/M
3300012207Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaGEnvironmentalOpen in IMG/M
3300012210Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaGEnvironmentalOpen in IMG/M
3300012211Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaGEnvironmentalOpen in IMG/M
3300012349Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaGEnvironmentalOpen in IMG/M
3300012351Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaGEnvironmentalOpen in IMG/M
3300012359Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaGEnvironmentalOpen in IMG/M
3300012361Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012683Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaGEnvironmentalOpen in IMG/M
3300012917Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaGEnvironmentalOpen in IMG/M
3300012923Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaGEnvironmentalOpen in IMG/M
3300012924Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012925Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012927Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300012944Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300018006Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4EnvironmentalOpen in IMG/M
3300020580Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-MEnvironmentalOpen in IMG/M
3300021086Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_1_08_16fungal (Illumina Assembly)EnvironmentalOpen in IMG/M
3300021170Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-MEnvironmentalOpen in IMG/M
3300021476Biofilm microbial communities from the roof of an iron ore cave, State of Minas Gerais, Brazil - TC_06 Biofilm (v2)EnvironmentalOpen in IMG/M
3300021858Metatranscriptome of freshwater sediment microbial communities from post-fracked creek in Pennsylvania, United States - ABR_2015 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022506Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022724Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-M (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300025324Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 10_1 (SPAdes)EnvironmentalOpen in IMG/M
3300026320Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_40cm (SPAdes)EnvironmentalOpen in IMG/M
3300026551Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)EnvironmentalOpen in IMG/M
3300026557Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungalEnvironmentalOpen in IMG/M
3300027512Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027651Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM3H0_M2 (SPAdes)EnvironmentalOpen in IMG/M
3300027660Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_Ref_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027678Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM1_M3 (SPAdes)EnvironmentalOpen in IMG/M
3300027846Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027875Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027882Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300027894Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300027910Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2014 (SPAdes)EnvironmentalOpen in IMG/M
3300027911Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)EnvironmentalOpen in IMG/M
3300027986Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)EnvironmentalOpen in IMG/M
3300028047Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)EnvironmentalOpen in IMG/M
3300028536Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300031231Coassembly Site 11 (all samples) - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031820Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515EnvironmentalOpen in IMG/M
3300031949Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT98D197EnvironmentalOpen in IMG/M
3300031962Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515EnvironmentalOpen in IMG/M
3300032174Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032954Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap


 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
F62_018858902170459010Grass SoilMKKIVAIAFVFSLLLGSPALFRVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKRGK
JGI12635J15846_1002470323300001593Forest SoilMKKILTIAFALSMVLGVSALIQIPTAAAVPGWAALPQGAPLKIIQGTVKVDGEKVMFVADEDSKSWEVTNPDTLKPHAGHHVEVSAHVNPEKSQMHVMSVKMVKKGDG*
JGI12635J15846_1025948023300001593Forest SoilMKKILTIAFALSLVLGVTALIHVPTAAAGPGWAALPQGAPLKTIQGTVKVDGEKVMFVADEDSKSWEVMNPDTLKPHAGHHVEISAHLNPEKSQIHVVSVKMVKKADK*
JGI25613J43889_1011191213300002907Grasslands SoilFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0058899_1202830213300004631Forest SoilMNKILVLVFGLCVAFGLTTFVHGSAAAARPSMAAQPQGGPLKTIQGTVKADGDKIKFVTDDDKKSWDVVNPETLKAHAGHHVELSAHVDADKSQIHVMSVKMMGKGESK*
Ga0070735_10003561103300005534Surface SoilMRRILIVAIAFSLLLGSPALFHVSTAAAKSTVAALPQGAPLKTLQGTVKVDGEKVMFVADDDNKSWEVLNPDALKAHAGHHVEISAHVYADKGQMHVMSVKMVKKG*
Ga0075024_10005347733300006047WatershedsMRKVLMVVFALSMVAGMASMIPASTAAANPGLAAMPQAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS*
Ga0075029_10003676133300006052WatershedsMKKVLFVVFALSMVAGMTSVFSVSPASAAPALAAMPQAAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKPHAGHHVEISAHIYADKMAVHVMSVKMVKKAS*
Ga0075029_10117997513300006052WatershedsMKKVLFIAFALSMVVGMTSLMHVSTAAARPGLAAEPQAAPLKTIQGTVKATGDEISFVADEDGKSWSVMNPETLKPHIGHHVEISAHVYADKMAVHIMSVKMVKKAS*
Ga0075017_10022049413300006059WatershedsMKKVLFVVFSLGMVLGMFSVFSVSSASAKPSLAAMPQAAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKPHAGHHVEISAHVYADKMAVHVMSVKMVKKSS*
Ga0075017_10122015113300006059WatershedsFVVALAIGVVSFVPAAIAASPALAAVPQGAPLKTIQGTVKADGDKMTFVADEDGKSWTVMNPDTLKEHAGHHVEVSAHVYIDKMSIHVMSVKMVKKGG*
Ga0075019_1098318813300006086WatershedsIAFALSMVVGMTSLLHVSTAAAKPGLAAEPQAAPLKTIQGTVKATGDEISFVADEDGKSWSVMNPETLKPHIGHHVEISAHVYADKMAVHIMSVKMVKKAS*
Ga0075015_10027845223300006102WatershedsMKKVLFIEFALSMVVGMTSLLHVSTAAAKPGLAAEPQAAPLKTIQGTVKATGDEISFVADEDGKSWSVMNPETLKPHIGHHVEISAHVYADKMAVHIMSVKMVKKAS*
Ga0075018_1000493433300006172WatershedsMRKVLMVVFALSLVAGMASMIPASTAAANPGLAAMPQAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS*
Ga0075018_1003819313300006172WatershedsMKKILAVAFALSMILGVTAFIHVSTTAARQALAALPQGAPLKTIQGTVKADGEKVSFVADENGKSWDVMNPEVLKPYAGHHVEVSAHVYADKSAIHVMTVKMVKKADK*
Ga0075021_1033166323300006354WatershedsMRKVLLVVFALSMVVGMASMIPVSTATANPGPAAMPQAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS*
Ga0099795_1001958523300007788Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0099795_1061228613300007788Vadose Zone SoilMKKVLMIAFALSMVVGMTLFMHVSTAAAKPGLAAMPQDAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS*
Ga0099829_1046139313300009038Vadose Zone SoilMKKILTMALAIYMVLGVTALIHTSTAAARPGLAAPPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK*
Ga0099829_1165124123300009038Vadose Zone SoilMKKLLVLAFGLCVAFGLTAFVHGSAAAARPSLAAQPQAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSV
Ga0099830_1000837333300009088Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0099828_1007691023300009089Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVHGSAAAARPSLAAQPQAAPLKTIQGTVKADGDKITFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0099828_1145707823300009089Vadose Zone SoilMKKLLVLAFGLCVALGLTALVHGSAAAARPSLAAHPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGH
Ga0099828_1176951113300009089Vadose Zone SoilMNKFLTIAYALSVVLGATTLICESAAASPGLAALPQGAPLKTLQGTVKVEGEKVMFVADEDGKSWEVMNPDTLKPHAGHHVEVRAHVNSGKGQLHDMSVKIVKNSDK*
Ga0099827_1000498553300009090Vadose Zone SoilMKKILTIALVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK*
Ga0099827_1049714513300009090Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVHGSAATARPSLAAQPQAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0099792_1010231433300009143Vadose Zone SoilMKKILAIAFAFSLLLGSPALFHVSTAAAKPAPAASPQGAPLKTMQGTVKVDGDKVMFVADDDNKSWEVSNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0099792_1087536313300009143Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKLDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0099796_1001181223300010159Vadose Zone SoilMKKILAIAFAFSLLLGSPALFHVWTAAAKPAPAASPQGAPLKTMQGTVKVDGDKVMFVADDDNKSWEVSNPESLKPHAGHHVEISAHVYAEKSQMHVMSVKMVKKGEK*
Ga0099796_1012647823300010159Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSMSAAKPGRAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKG
Ga0150983_1281395813300011120Forest SoilYWAMKQLLVLAFGLCVAFGLTTFVHSSAAAARPSLAAQPQGAPLKTIQGTVKADGDKITFVTDDDKKSWDVMNPETLKAHAGHHVELSAHVYADKSQIHVMSVKMMGKGDSK*
Ga0150983_1649207223300011120Forest SoilMRKFLTVVFTLSLVLGATTLIHVSTAAARPGLAALPQGAPLKTIQGTVKVDGDKVMFVADEDGKSWEVMNPETLKSHAGHHVEVSAHVYADKNQIHVMSVKMVKKADKY*
Ga0150983_1669167513300011120Forest SoilMKKLLVLAFGLCVAFGLTAFVHGSAAAARPSLAAQPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0137392_1039667613300011269Vadose Zone SoilMKRILAIAFGFSLLLGSPALFHASMAAARPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137392_1095833813300011269Vadose Zone SoilMKKFLVIAFAISMVAGMTMLIPVSTSAAKPALAALPQGAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKAHAGHHVEVSAHVYADKMANHVMSVKMVKKAG*
Ga0137392_1145766613300011269Vadose Zone SoilTRRLSTMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK*
Ga0137391_1000933153300011270Vadose Zone SoilMKKILTIALLLSIVPGVTELIHAPTAAAKPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0137393_1000412363300011271Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK*
Ga0137393_1033680513300011271Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSTAAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKG
Ga0137393_1118262013300011271Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVHGSAAAARPSLAAQPQAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0137389_1006566333300012096Vadose Zone SoilKKADSSTRRLSTMKKILTMALAIYMVLGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK
Ga0137389_1113304513300012096Vadose Zone SoilAFVHGSAAAARPSLAAQPHAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0137388_1022889413300012189Vadose Zone SoilMKKFLVIAFAISMVAGMTMLIPVSTSAAKPALAALPQGAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKAHAGHHVEVSAHVYADKMAIHVMSVKMVKKAA*
Ga0137388_1031878213300012189Vadose Zone SoilMKKLLVLAFVLCVALGLTAFVPGSAAAARPSLAAQPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK*
Ga0137363_1040393213300012202Vadose Zone SoilMKKIVAITFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137399_1054864423300012203Vadose Zone SoilMKKIVAIVFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137399_1065717713300012203Vadose Zone SoilMKKVLMIAFALSMLIGMTLFMHVSTAAAKPGLAAMPQDAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMS
Ga0137380_1066750313300012206Vadose Zone SoilMKKILTMALAIYMVLGVTALIHTSTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDSLKPHVGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0137381_1021492923300012207Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNAEKNQIHVMSVKMVKKAEK*
Ga0137378_1030621823300012210Vadose Zone SoilMKKILTIVFGLFMIAGLTASIQLSLSTAAARPALAALPQGAPLKTIQGTVKVAGEKVTLVADEDGKSWEVMNPDTLKPHAGHHVEISGHVYPDKNQVHVLSVKMVKKAEK*
Ga0137378_1152671813300012210Vadose Zone SoilMKKILTIAFVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNAEKNQIHVMSVKM
Ga0137377_1115957113300012211Vadose Zone SoilMKKILMIAFVLSMVLDVTAFIHAPTAAARVSLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEISAHVYADKSQIHVMSVKMVKKAEK*
Ga0137387_1000092653300012349Vadose Zone SoilMKKILTIAFVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0137386_1024158423300012351Vadose Zone SoilMKKILTMALAIYMVLGVTALIHASTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK*
Ga0137385_1076042623300012359Vadose Zone SoilMKKILTIAFVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEQVTFVADEDNKSWEVMNPDTLKPHAGHHVEVIAHGNAEK
Ga0137360_1072777923300012361Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKGKVHVMSVKMLKA
Ga0137390_1085113713300012363Vadose Zone SoilMKKILTIAFALSIVPSVTALIHTPAAAARPSLAALPQGAPLKTIQGTVKVDGEKVTFVADEDNKSWEVMNPDLLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK*
Ga0137398_1027044623300012683Vadose Zone SoilMKKILAIAFAFSLLLGSPALFHVWTAAAKPAPAASPQGAPLKTMQGTVKVDGDKVMFVADDDNKSWEVSNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137398_1073953213300012683Vadose Zone SoilERKERFFMKKIVAIVFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137395_1004219423300012917Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSTAAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137359_1033886423300012923Vadose Zone SoilMKKIAAITFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137413_1114477913300012924Vadose Zone SoilAFALTMVVGMTLFMHVSTAAAKPGLAAMPQDAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS*
Ga0137419_1007988123300012925Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSMSAAKPGRAALPQGTPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0137416_1079406413300012927Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVQGSATAARPSLAAQPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKPHAGHHVELSAHVYADKSQIHVMSVK
Ga0137410_1157424913300012944Vadose Zone SoilGSSALFHVSTAAAKPAPAAAPQGAPLKTMQGTVKVDGEKVTFVADDDNKSWEVLNPEPLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK*
Ga0187804_1032033513300018006Freshwater SedimentMRKAILIVLALMLVLGVMPSTRGAAAAAKPSFAALPQGAPLKTIQGTVKTNGDKITFVADEDGKSWEVMNPDTLKAHAGHHVEVSAHVYADKNSIHVMSVKMVKKAG
Ga0210403_1003748643300020580SoilMKKALFVMFVLSMVVGMTSMISVSTAAAKPGLAAMPQATPAPLKTIQGTVKADGDKITFVADEDGKSWDIMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS
Ga0210403_1006796533300020580SoilMKRILTIAFVLSLLAGAPALFDVSAGAAKSIPAAMPQGAPLKTLQGTVKVDGDKVMFVADDDNKSWEVLNPDTLKAHAGHHVEVSAHVYADKNQMHVMSVKMVKKGEK
Ga0210403_1038652423300020580SoilMRKFLTVVFTLSLVLGATTLIHVSTAAARPGLAALPQGAPLKTIQGTVKVDGDKVMFVADEDGKSWEVMNPETLKSHAGHHVEVSAHVYADKNQIHVMSVKMVKKADKY
Ga0179596_1001187313300021086Vadose Zone SoilMKKILTIALVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKN
Ga0179596_1005952513300021086Vadose Zone SoilMKKVLMIAFALSMVVGMTLFMHVSTAAAKPGLAAMPQDAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS
Ga0210400_1000267183300021170SoilMRKFLTVVFTLSLVLGATSLIHVSTAAARPGLAALPQGAPLKTIQGTVKVDGDKVMFVSDEDGKTWEVMNPETLKPHAGHHVEVSAHVYSDKNQIHVMSVKMVKKADKY
Ga0210400_1003261133300021170SoilMKKALTIAFALSLLLGTPALFQLSVAGKPGPAALPQGTPLKTMQGTVKVDGEKVMFVADDDNKSWEVLNPDTLKAHGGHHVEISAHVYPGKFGWLVPKL
Ga0187846_1002406733300021476BiofilmMKKVLVLAFALCVAVGLTTFVHGSAAAVRTSLAAQPQAAPLKTIQGTVKADGDKITFVTDDDKKSWEVMNPETLKAHAGHHVELSAHVYADKGQIHVMSVKMMGKGDSK
Ga0213852_154343323300021858WatershedsMKKVLFIAFALSMVVGMTSLLHVSTAAAKPGLAAEPQAAPLKTIQGTVKATGDEISFVADEDGKSWSVMNPETLKPHIGHHVEISAHVYADKMAVHIMSVKMVKKAS
Ga0242648_103073013300022506SoilMRKFLTVVFTLTLVLGATTLIHVSTAAARPGLAALPQGAPLKTIQGTVKVDGDKVMFVADEDGKSWEVMNPETLKSHAGHHVEVSAHVYADKNQIHVMSVKMVKKADKY
Ga0242665_1003910013300022724SoilMKKVLVLAFGMCVALGLTAFVHGSAATARPSLAAQPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKPHAGHHVELSAHVYADKSQIHVMSVKMLGKGDSK
Ga0209640_1124976913300025324SoilMMKKLLVVAFALSVVLGLAAISHVPASATTPALAAAPQGAPLKTIQGTVKAEGEKVTFVTDGDSKSWEVMNPETLKAHAGHHVELSAHIYEDKSSIHVMSVKMMQ
Ga0209131_102285233300026320Grasslands SoilMKKIVAIAFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK
Ga0209131_116731823300026320Grasslands SoilMKKILAITFAFSLLLGSPALFHVSTAAAKPAPAASPQGAPLKTMQGTVKVDGDKVMFVADDDNKSWEVSNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK
Ga0209648_1059691913300026551Grasslands SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKM
Ga0179587_1004278223300026557Vadose Zone SoilMKKIVAIVFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK
Ga0179587_1074076713300026557Vadose Zone SoilMKKILAIAFAFSLLLGSPALFHVWTAAANPAPAASPQGAPLKTMQGTVKVDGDKVMFVADDDNKSWEVSNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK
Ga0209179_106793013300027512Vadose Zone SoilMKKIVAIAFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHV
Ga0209217_101874633300027651Forest SoilMAAEYGPQCIGSDKTHSLEHAKKQSYDLTRRSSVMRKLPTIVFSFLMILSVTGLIHVSTAAATSRLVALPQGAPLKTMQGTVKVDGEKVMFVADEDNKSWEVTNPDTLKPHVGHHVEIGAHLNPDKNQLHVMSVKMVNKGEK
Ga0209736_104346413300027660Forest SoilMKKILTIAFALSMVLGVSALIQIPTAAAVAGWAALPQGAPLKIIQGTVKVDGEKVMFVADEDSKSWEVTNPDTLKPHAGHHVEVSAHVNPEKSQMHVMSVKMVKKGDG
Ga0209011_103073513300027678Forest SoilSVMKKILTIAFALSLVLGVTALIHVPTAAAGPGWAALPQGAPLKTIQGTVKVDGEKVMFVADEDSKSWEVMNPDTLKPHAGHHVEISAHLNPEKSQIHVVSVKMVKKADK
Ga0209180_1048129413300027846Vadose Zone SoilMKKILTIALVLSIVPGVTVLIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK
Ga0209283_1008402323300027875Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVHGSAAAARPSLAAQPQAAPLKTIQGTVKADGDKITFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK
Ga0209283_1044781613300027875Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK
Ga0209590_1019893513300027882Vadose Zone SoilMKKILTIALVLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKSQIHVMSVKMVKKAEK
Ga0209590_1021417323300027882Vadose Zone SoilMNKLLVLAFGLCVALGLTAFVHGSAATARPSLAAQPQAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK
Ga0209068_1015223123300027894WatershedsMRKVLLVVFALSMVVGMASMIPVSTATANPGPAAMPQAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS
Ga0209068_1022832613300027894WatershedsMKKILAIAFTLSLLPGSPALFHVTAAAAKPGLAALPQGTPLKTMQGTVKVDGEKVMFVADDDKKSWEVLNPDTVKPHAGHHVEISAHVYADKSQMHVMSVKMVKKSDK
Ga0209488_1047176123300027903Vadose Zone SoilMKKILTIALLLSIVPGVTALIHAPTAAARPGLAALPQGAPLKTIQGTVKLDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEVSAHVNADKNQIHVMSVKMVKKAEK
Ga0209583_1004732113300027910WatershedsMRKVLMVVFALSMVAGMASMIPASTAAANPGLAAMPQAPLKTIQGTVKADGDKISFVADEDGKSWDVMNPETLKPHAGHHVEVSAHVYADKMAIHIMSVKMVKKAS
Ga0209698_1008676433300027911WatershedsMKKVLFVVFSLGMVLGMFSVFSVSSASAKPSLAAMPQAAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKPHAGHHVEISAHVYADKMAVHVMSVKMVKKSS
Ga0209698_1028287923300027911WatershedsMKKVLFVVFALSMVAGMTSVFSVSPASAAPALAAMPQAAPLKTIQGTVKADGDKITFVADEDGKSWDVMNPETLKPHAGHHVEISAHIYADKMAVHVMSVKMVKKAS
Ga0209168_1000460643300027986Surface SoilMRRILIVAIAFSLLLGSPALFHVSTAAAKSTVAALPQGAPLKTLQGTVKVDGEKVMFVADDDNKSWEVLNPDALKAHAGHHVEISAHVYADKGQMHVMSVKMVKKG
Ga0209526_1027582823300028047Forest SoilMKKVLTIAFALSLLLGTPALFQLSVAAKPGPAALPQGTPLKTMQGTVKVDGEKVMFVADDDNKSWEVLNPDTLKAHVGHHVEISAHVYADKGQLHVMSVKMAKKSDK
Ga0137415_1036022923300028536Vadose Zone SoilMKKLLVLAFGLCVALGLTAFVQGSATAARPSLAAQPQGAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKPHAGHHVELSAHVYADKSQIHVMSVKMLGKGDSK
Ga0265338_1026481523300028800RhizosphereMKKFLAIAFALSMVLGVASFVRISRVAAASPAALPQGAPLKTIQGTVKVDGDKVMFISDEDKKSWGVMNPETLKAHDGHHVEVSAHIYADKNQIHVMSVKMAK
Ga0170824_10376477213300031231Forest SoilTALAIIAQTLRSGLQLRRRIEFKERVLMKKMLAIAFAFSLLLGSPALFHVSTAAAKPGLAVLPQGAPLKTIQGTVKVDGDKVMFVADDDNKSWEVLNPESLKPHAGHHVEISAHVYADKSQMHVMSVKMVKKGEK
Ga0307469_1110577113300031720Hardwood Forest SoilMKRILLIVFALAMTLGVTVPVSSTAARPGLGALPQGAPLKTIQGTVKVDGEKVMFVSDEDSKSWEVMNPDTLKPHAGHHVEVSAHVYADKSQIHVMSVKMVKKPDK
Ga0307473_1032642713300031820Hardwood Forest SoilMKKLLVLAFGLCVAFGLTAFVHGSAAAARPSLAAQPQAAPLKTIQGTVKADGDKVTFVTDDDKKSWDVMNPETLKAHAGHHVELSAHIYADKSQIHVMSVKMLGKGDSK
Ga0214473_1074332213300031949SoilMMKKLLVVAFALSVVLGLAAISHVPASATTPALAAAPQGAPLKTIQGTVKAEGEKITFVTDGDSKSWEVMNPETLKPHAGHHVELSAHIYEDKSSIHVMSVKMMQ
Ga0307479_1040360513300031962Hardwood Forest SoilMKKLLVLAFGLCVAFGLTAFVHGSAAAARPSLAAQPQGAPLKTIQGTVKADGDKITFVTDDDKKSWDVMNPETLKAHAGHHVELSAHVYADKSQIHVMSVKMMGKGDSK
Ga0307479_1176834913300031962Hardwood Forest SoilILAIAFAFSLLLGSPALFHVSTSAAKPGPAALPQGAPLKTIQGTVKVDGDKVTFVSDDDNKSWEVLNPETLKPHAGHHVEISAHVYADKGQMHVMSVKMVKKGEK
Ga0307479_1180308113300031962Hardwood Forest SoilMKKFLRIAFVISMILGVTALIHTPMAAARAGLAALPQGAPLKTIQGTVKVDGEKVMFVADEDNKSWEVMNPDTLKPHAGHHVEISAHVYADKSQIHVMSVKMVKKAEK
Ga0307470_1032539023300032174Hardwood Forest SoilMKKILTIAFVLSLLTGAPALFDVSAGAAKSIPAAIPQGAPLKTLQGTVKVDGDKVIFVADDDNKSWEVLNPDTLKAHAGHHVEVSAHVYADKNQMHVMSVKMVKKGEK
Ga0335085_10004266123300032770SoilMARVIRRTKKIAWVSLVLTIVLAATPLLFASISAARPSLAALPQGAPLKTIQGTVKAEGDKITFVADEDGKSWNVMNPDVLKAHRGHHVEVSAHVYMDRNSIHVLSVKMVKKPG
Ga0335083_1018078133300032954SoilMARVIRRTKKIAWVSLVLTIVLAATPLLFASISAARPSLAALPQGAPLKTIQGTVKAEGDKITFVADEDGKSWNVMNPDVLKAHRGHHVEVSAHVYMDRNSIHVLSV

 ⦗Top⦘


Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.