Metagenome / Metatranscriptome Family F084690

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084690
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	73 residues
Representative Sequence	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR
Number of Associated Samples	101
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	57.80 %
% of genes near scaffold ends (potentially truncated)	38.39 %
% of genes from short scaffolds (< 2000 bps)	76.79 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (59.821 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (16.964 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (41.964 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 8.00% β-sheet: 30.67% Coil/Unstructured: 61.33%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF04519	Bactofilin	37.50
PF08818	DUF1801	12.50
PF02195	ParBc	6.25
PF00497	SBP_bac_3	1.79
PF07995	GSDH	0.89
PF12697	Abhydrolase_6	0.89
PF06863	DUF1254	0.89
PF01391	Collagen	0.89
PF03869	Arc	0.89
PF02261	Asp_decarbox	0.89
PF02357	NusG	0.89
PF03144	GTP_EFTU_D2	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1664	Cytoskeletal protein CcmA, bactofilin family	Cytoskeleton [Z]	37.50
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	12.50
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	12.50
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	12.50
COG0250	Transcription termination/antitermination protein NusG	Transcription [K]	0.89
COG0853	Aspartate 1-decarboxylase	Coenzyme transport and metabolism [H]	0.89
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.89
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	59.82 %
Unclassified	root	N/A	40.18 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	59.82 %
Unclassified	root	N/A	40.18 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	59.82 %
Unclassified	root	N/A	40.18 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	52.68 %
Unclassified	root	N/A	40.18 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	46.43 %
Unclassified	root	N/A	40.18 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	39.29 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
unclassified Hyphomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales	20.54 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	6.25 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	4.46 %
Methylobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae	0.89 %
Propionibacteriales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.54 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	4.46 %
Methyloceanibacter	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter	4.46 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.89 %
Nocardioidaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae	0.89 %
Rhodomicrobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.54 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4.46 %
unclassified Bradyrhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium	2.68 %
Nocardioides	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides	0.89 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.89 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.54 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4.46 %
Bradyrhizobium sp. CCBAU 53421	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 53421	2.68 %
unclassified Nocardioides	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides	0.89 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.89 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	40.18 %
Hyphomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	20.54 %
Methyloceanibacter caenitepidi	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4.46 %
Bradyrhizobium sp. CCBAU 53421	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 53421	2.68 %
Nocardioides sp. B-3	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. B-3	0.89 %
Rhodomicrobium vannielii	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	0.89 %
Microvirga	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000567\|JGI12270J11330_10003461	All Organisms → cellular organisms → Bacteria	11313	Open in IMG/M
3300004157\|Ga0062590_100934489	Not Available	816	Open in IMG/M
3300005330\|Ga0070690_100345222	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	1079	Open in IMG/M
3300005332\|Ga0066388_100199134	All Organisms → cellular organisms → Bacteria → Proteobacteria	2622	Open in IMG/M
3300005332\|Ga0066388_100222790	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2516	Open in IMG/M
3300005347\|Ga0070668_100219080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodomicrobium → Rhodomicrobium vannielii	1569	Open in IMG/M
3300005440\|Ga0070705_100372295	All Organisms → cellular organisms → Bacteria	1049	Open in IMG/M
3300005457\|Ga0070662_101103039	Not Available	681	Open in IMG/M
3300005536\|Ga0070697_101734410	Not Available	559	Open in IMG/M
3300005543\|Ga0070672_100888624	Not Available	787	Open in IMG/M
3300005618\|Ga0068864_100901239	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	873	Open in IMG/M
3300005719\|Ga0068861_100650349	Not Available	974	Open in IMG/M
3300005764\|Ga0066903_100642058	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1853	Open in IMG/M
3300005834\|Ga0068851_10312358	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	906	Open in IMG/M
3300005844\|Ga0068862_100168279	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1961	Open in IMG/M
3300006057\|Ga0075026_100213407	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1021	Open in IMG/M
3300006172\|Ga0075018_10033472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2066	Open in IMG/M
3300006572\|Ga0074051_11777841	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1107	Open in IMG/M
3300006574\|Ga0074056_11599074	Not Available	608	Open in IMG/M
3300006854\|Ga0075425_101443890	Not Available	778	Open in IMG/M
3300006881\|Ga0068865_100263190	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1366	Open in IMG/M
3300007076\|Ga0075435_101435218	Not Available	605	Open in IMG/M
3300009098\|Ga0105245_10191643	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1958	Open in IMG/M
3300009176\|Ga0105242_10686987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	1000	Open in IMG/M
3300009525\|Ga0116220_10072184	Not Available	1449	Open in IMG/M
3300009545\|Ga0105237_10575378	All Organisms → cellular organisms → Bacteria → Proteobacteria	1133	Open in IMG/M
3300009792\|Ga0126374_10234419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1187	Open in IMG/M
3300009821\|Ga0105064_1111636	Not Available	566	Open in IMG/M
3300010029\|Ga0105074_1122833	Not Available	505	Open in IMG/M
3300010366\|Ga0126379_13629529	Not Available	517	Open in IMG/M
3300010371\|Ga0134125_10058680	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	4278	Open in IMG/M
3300010399\|Ga0134127_10073384	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2912	Open in IMG/M
3300010403\|Ga0134123_11090741	All Organisms → cellular organisms → Bacteria	821	Open in IMG/M
3300012513\|Ga0157326_1078793	Not Available	535	Open in IMG/M
3300012931\|Ga0153915_11335430	Not Available	838	Open in IMG/M
3300012951\|Ga0164300_10882319	Not Available	563	Open in IMG/M
3300012957\|Ga0164303_10001830	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	5950	Open in IMG/M
3300012958\|Ga0164299_10005612	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	4264	Open in IMG/M
3300012958\|Ga0164299_10936236	Not Available	632	Open in IMG/M
3300012960\|Ga0164301_10644870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	789	Open in IMG/M
3300012971\|Ga0126369_10068020	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Methyloceanibacter → Methyloceanibacter caenitepidi	3111	Open in IMG/M
3300012984\|Ga0164309_10029754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Methylobacteriaceae → Microvirga	2982	Open in IMG/M
3300012985\|Ga0164308_10046608	All Organisms → cellular organisms → Bacteria → Proteobacteria	2774	Open in IMG/M
3300012985\|Ga0164308_10159890	All Organisms → cellular organisms → Bacteria	1675	Open in IMG/M
3300012986\|Ga0164304_11019870	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	657	Open in IMG/M
3300012986\|Ga0164304_11278250	Not Available	596	Open in IMG/M
3300012987\|Ga0164307_11416481	Not Available	586	Open in IMG/M
3300012987\|Ga0164307_11448428	Not Available	580	Open in IMG/M
3300012989\|Ga0164305_11229099	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	651	Open in IMG/M
3300013307\|Ga0157372_13301772	Not Available	514	Open in IMG/M
3300014326\|Ga0157380_10314344	All Organisms → cellular organisms → Bacteria → Proteobacteria	1449	Open in IMG/M
3300014745\|Ga0157377_11040877	Not Available	623	Open in IMG/M
3300015371\|Ga0132258_11765141	Not Available	1560	Open in IMG/M
3300015373\|Ga0132257_100010387	All Organisms → cellular organisms → Bacteria → Proteobacteria	9301	Open in IMG/M
3300015374\|Ga0132255_104990094	Not Available	562	Open in IMG/M
3300016270\|Ga0182036_11006471	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	687	Open in IMG/M
3300016294\|Ga0182041_10179474	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1666	Open in IMG/M
3300016294\|Ga0182041_10582159	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	981	Open in IMG/M
3300016319\|Ga0182033_10079918	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2336	Open in IMG/M
3300016357\|Ga0182032_10505544	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	994	Open in IMG/M
3300016371\|Ga0182034_10108135	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2010	Open in IMG/M
3300016404\|Ga0182037_10263868	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 53421	1369	Open in IMG/M
3300016422\|Ga0182039_10003671	All Organisms → cellular organisms → Bacteria → Proteobacteria	8469	Open in IMG/M
3300016422\|Ga0182039_10339316	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1258	Open in IMG/M
3300017792\|Ga0163161_11648251	Not Available	567	Open in IMG/M
3300017822\|Ga0187802_10153371	Not Available	880	Open in IMG/M
3300017932\|Ga0187814_10098385	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	1079	Open in IMG/M
3300017955\|Ga0187817_10047425	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2642	Open in IMG/M
3300018028\|Ga0184608_10017814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2533	Open in IMG/M
3300018465\|Ga0190269_10281574	Not Available	957	Open in IMG/M
3300021560\|Ga0126371_10957806	Not Available	998	Open in IMG/M
3300025900\|Ga0207710_10019226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2914	Open in IMG/M
3300025907\|Ga0207645_10996445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Propionibacteriales → Nocardioidaceae → Nocardioides → unclassified Nocardioides → Nocardioides sp. B-3	567	Open in IMG/M
3300025934\|Ga0207686_10582196	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	879	Open in IMG/M
3300025937\|Ga0207669_10753720	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	804	Open in IMG/M
3300025961\|Ga0207712_11781736	Not Available	552	Open in IMG/M
3300027523\|Ga0208890_1002095	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2097	Open in IMG/M
3300027604\|Ga0208324_1032263	Not Available	1572	Open in IMG/M
3300027641\|Ga0208827_1002460	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	7689	Open in IMG/M
3300027682\|Ga0209971_1138058	Not Available	601	Open in IMG/M
3300027717\|Ga0209998_10037512	Not Available	1091	Open in IMG/M
3300028380\|Ga0268265_12053516	Not Available	579	Open in IMG/M
3300028884\|Ga0307308_10553614	Not Available	552	Open in IMG/M
3300031170\|Ga0307498_10104875	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031170\|Ga0307498_10230457	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	662	Open in IMG/M
3300031226\|Ga0307497_10199521	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	865	Open in IMG/M
3300031455\|Ga0307505_10434821	Not Available	627	Open in IMG/M
3300031547\|Ga0310887_10216448	All Organisms → cellular organisms → Bacteria	1051	Open in IMG/M
3300031573\|Ga0310915_10381290	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	1001	Open in IMG/M
3300031719\|Ga0306917_10069299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2440	Open in IMG/M
3300031719\|Ga0306917_10329383	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1184	Open in IMG/M
3300031720\|Ga0307469_10286133	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1349	Open in IMG/M
3300031720\|Ga0307469_10806804	Not Available	861	Open in IMG/M
3300031740\|Ga0307468_102179595	Not Available	535	Open in IMG/M
3300031833\|Ga0310917_11215932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 53421	501	Open in IMG/M
3300031890\|Ga0306925_11939658	Not Available	558	Open in IMG/M
3300031910\|Ga0306923_10193514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	2324	Open in IMG/M
3300031912\|Ga0306921_10274791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1974	Open in IMG/M
3300031942\|Ga0310916_10431904	Not Available	1121	Open in IMG/M
3300032003\|Ga0310897_10379071	Not Available	665	Open in IMG/M
3300032012\|Ga0310902_10424183	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	852	Open in IMG/M
3300032017\|Ga0310899_10138599	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300032075\|Ga0310890_10057519	Not Available	2257	Open in IMG/M
3300032180\|Ga0307471_102037131	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	720	Open in IMG/M
3300033289\|Ga0310914_11361954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. CCBAU 53421	612	Open in IMG/M
3300033433\|Ga0326726_11186284	Not Available	743	Open in IMG/M
3300034090\|Ga0326723_0229247	All Organisms → cellular organisms → Bacteria → Proteobacteria	826	Open in IMG/M
3300034090\|Ga0326723_0263362	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → unclassified Hyphomicrobiales → Hyphomicrobiales bacterium	770	Open in IMG/M
3300034817\|Ga0373948_0214977	Not Available	507	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	71.43%
Host-Associated	Host-Associated	28.57%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	65.18%
Plants	Host-Associated → Plants	28.57%
Aquatic	Environmental → Aquatic	6.25%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	62.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	15.18%
Rhizoplane	Host-Associated → Plants → Rhizoplane	13.39%
Freshwater	Environmental → Aquatic → Freshwater	3.57%
Sediment	Environmental → Aquatic → Sediment	2.68%
Peat	Environmental → Terrestrial → Peat	2.68%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	55.36%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.82%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Soil	Host-Associated → Plants → Rhizosphere → Soil	5.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Sand	Environmental → Terrestrial → Soil → Sand	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	29.46%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	20.54%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	5.36%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	4.46%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	16.96%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	13.39%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	3.57%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	1.79%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000567	Peat soil microbial communities from Weissenstadt, Germany - SII-2010	Environmental	Open in IMG/M
3300004157	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - - Combined assembly of AARS Block 2	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005440	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005719	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2	Host-Associated	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006572	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006574	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtHAA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009792	Tropical forest soil microbial communities from Panama - MetaG Plot_12	Environmental	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300012513	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510	Host-Associated	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012957	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012986	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_217_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013307	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014745	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300017822	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2	Environmental	Open in IMG/M
3300017932	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW-S_4	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025900	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025907	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025961	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027604	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG (SPAdes)	Environmental	Open in IMG/M
3300027641	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_8_FC metaG (SPAdes)	Environmental	Open in IMG/M
3300027682	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Inoculated plant M3 S AM (SPAdes)	Host-Associated	Open in IMG/M
3300027717	Arabidopsis thaliana rhizosphere microbial communities from the Joint Genome Institute, USA, that affect carbon cycling - Endophyte Co-N S PM (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031170	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 12_S	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031455	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S	Environmental	Open in IMG/M
3300031547	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4	Environmental	Open in IMG/M
3300031573	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M
3300034817	Populus rhizosphere microbial communities from soil in West Virginia, United States - GW9791_WV_N_1	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12270J11330_100034616	3300000567	Peatlands Soil	MTTIWAWCLVFVISGQQPIVQFDYKTEADCDASRIAVKAQQPDTQSQSWCVPIVKPDKLNSQKANKRKLVRKAKRRSSPRLASR*
Ga0062590_1009344892	3300004157	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQYADAASQSWCVPIPKPEKAAKAKPKKRKPVRSAKAMMLAAWSR*
Ga0070690_1003452223	3300005330	Switchgrass Rhizosphere	AMVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0066388_1001991343	3300005332	Tropical Forest Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRILVNAEHADAASQSWCVPIPKPEKIVKAKSKKRHTARRR*
Ga0066388_1002227901	3300005332	Tropical Forest Soil	EADCNTSRIAVNAQHADATAQSWCVPIPKPEKAVKARSRKHTARR*
Ga0068869_1004999561	3300005334	Miscanthus Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAA
Ga0070668_1002190801	3300005347	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0070705_1003722952	3300005440	Corn, Switchgrass And Miscanthus Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR*
Ga0070662_1011030392	3300005457	Corn Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSTKRR*
Ga0070697_1017344102	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0070672_1008886242	3300005543	Miscanthus Rhizosphere	LIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPTRSARRR*
Ga0068855_1010398091	3300005563	Corn Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKA
Ga0068864_1009012391	3300005618	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSAKRR*
Ga0068861_1006503493	3300005719	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAK
Ga0066903_1006420584	3300005764	Tropical Forest Soil	MVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNAQQADATAQSWCVPIPKPEKAVKARSRKHTARR*
Ga0068851_103123581	3300005834	Corn Rhizosphere	PIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0068862_1001682793	3300005844	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEAHCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0075026_1002134072	3300006057	Watersheds	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRITVNAQHAEAEAQSWCVPIPKPEKTLKAKSKKRRAAKWR*
Ga0075018_100334724	3300006172	Watersheds	VVTIWGWCLVFVIAGQQPIVQFGYKTEADCDASRITVNTQQADAEAQSWCVPIPKPEKTVKAKSQKRRTAKRR*
Ga0074051_117778411	3300006572	Soil	KTEADCDASRIAVKAQYEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR*
Ga0074056_115990742	3300006574	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR*
Ga0075425_1014438902	3300006854	Populus Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQYADAASQSWCVPIPKPEKAANAKPKKRKPVRSAKRQ*
Ga0068865_1002631903	3300006881	Miscanthus Rhizosphere	GQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0075435_1014352182	3300007076	Populus Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR*
Ga0105245_101916431	3300009098	Miscanthus Rhizosphere	RPSARVSAMVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPTRSARRR*
Ga0105242_106869873	3300009176	Miscanthus Rhizosphere	WGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR*
Ga0116220_100721841	3300009525	Peatlands Soil	MTTIWAWCLVFVISGQQPIVQFDYKTEADCDASRIAVKAQQPDTQSQSWCVPIVKPDKLNSQKANKRKFVEKAKGRSTPRLASR*
Ga0105237_105753783	3300009545	Corn Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKS
Ga0126374_102344191	3300009792	Tropical Forest Soil	FDYKTEADCNASRILVNAEHADAAPQSWCVPIPKPEKIVKAKYKKRHTARRR*
Ga0105064_11116361	3300009821	Groundwater Sand	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRFAVKAQHEDAQSQSWCVPIPKPEKTAKAKPKK
Ga0105074_11228332	3300010029	Groundwater Sand	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRFAVKAQHEDAQSQSWCVPIPKPEKTAKAKPKKRK
Ga0126379_136295291	3300010366	Tropical Forest Soil	LRRTIEGRLMVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNAQHADATAQSWCVPIPKPEKAVKARSRKHTARR*
Ga0134125_100586804	3300010371	Terrestrial Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR*
Ga0134127_100733845	3300010399	Terrestrial Soil	MVTIWGWCLVFLIAGQQPVVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR*
Ga0134123_110907411	3300010403	Terrestrial Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDESRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR*
Ga0157326_10787932	3300012513	Arabidopsis Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRIAVKAQHEDAAAQSWCVPIPKPEKPKRKPVRSAKRR*
Ga0153915_113354302	3300012931	Freshwater Wetlands	MTTIWAWCLVFVISGQQPIVQFDYKTEADCDASRIAVKAQQPDMQSQSWCVPIVKPEKANNHKPNKRKLVRKVKRHSSTRLASR*
Ga0164300_108823192	3300012951	Soil	RVSAMVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR*
Ga0164303_100018301	3300012957	Soil	LRRTVEVHVVVTIWGSCLVFVIAGQQPIVQFDYKTEADCDASRITVNTEHADAEAQSWCVPIPKPEKTVRAKSQKRRTAKRR*
Ga0164299_100056123	3300012958	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDATRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0164299_109362362	3300012958	Soil	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRITVNAQHANAEAQSWCVPIPKPEKTVKAKSKKRRTAKRR*
Ga0164301_106448702	3300012960	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEAHCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR*
Ga0126369_100680203	3300012971	Tropical Forest Soil	MVTIWAWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNAQHADATAQSWCVPIPKPEKAVKARSRKHTARR*
Ga0164309_100297547	3300012984	Soil	VQFDYKTEADCDASRITVNTQHADAEAQSWCVPIPKPEKTVRAKSQKRRTAKRR*
Ga0164308_100466087	3300012985	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPTRSARRR*
Ga0164308_101598904	3300012985	Soil	AGQQPIVQFDYKTEADCDASRITVNTQHADAEAQSWCVPIPKPEKTVRAKSQKRRTAKRR
Ga0164304_110198701	3300012986	Soil	IVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR*
Ga0164304_112782502	3300012986	Soil	IVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0164307_114164811	3300012987	Soil	QQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR*
Ga0164307_114484282	3300012987	Soil	GQQPIVQFDYEADCDASRITVNAQHADAKAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0164305_112290991	3300012989	Soil	IAGQQPIVQFDYKTEAHCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR*
Ga0157372_133017721	3300013307	Corn Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKTKKRKPVRSAKP*
Ga0157380_103143442	3300014326	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKPKPARSARRR*
Ga0157377_110408772	3300014745	Miscanthus Rhizosphere	CLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPTRSARRR*
Ga0132258_117651414	3300015371	Arabidopsis Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRILVNAENADAAPQSWCVPIPKPEKIVKAKYKKRHTARRR*
Ga0132257_10001038711	3300015373	Arabidopsis Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSECVPIPKPEKAAKAKPKRKPVRSAKRR*
Ga0132255_1049900941	3300015374	Arabidopsis Rhizosphere	KRRTIEVRLMVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRILVNAENADAAPQSWCVPIPKPEKIVKAKSKKRHTARRR*
Ga0182036_110064712	3300016270	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSLHLARR
Ga0182041_101794741	3300016294	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSPHSARR
Ga0182041_105821591	3300016294	Soil	MVSFLLAGQQPIVQFDYKTEADCNTSRIAVNEQHADATAQSWCVLIPKPEKAVRAKSKSKKRHIARRQ
Ga0182033_100799182	3300016319	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKQKLVRKVKRHSSLHLARR
Ga0182032_105055441	3300016357	Soil	GVAMTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPAKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0182034_101081353	3300016371	Soil	MTTIWAWCLVFIISGQQPIVQFDYETEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKQKLVRKVRRHSSLHLARR
Ga0182037_102638683	3300016404	Soil	MTTIWAWCLVFIISGQQPMQFDYETEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0182039_100036716	3300016422	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPVVKPEKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0182039_103393164	3300016422	Soil	MVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNEQHADATAQSWCVPIPKPEKAVKGKV
Ga0163161_116482511	3300017792	Switchgrass Rhizosphere	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKAKPNKRKPVRSAKRR
Ga0187802_101533712	3300017822	Freshwater Sediment	MTTTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQEPGTQSQSWCVPIVKPEKLNNQKPHKRKLVRKARRNSSLHLASR
Ga0187814_100983853	3300017932	Freshwater Sediment	MTTTTIWAWCLVFISSGQQPIVQFDYKTEADCDASRIAVEAQEPGTQSQSWCVPIVKPEKLNNQKPHKRKLVRKARRNSSLHLASR
Ga0187817_100474251	3300017955	Freshwater Sediment	MTTTTIWAWCLVFIISGQQPIVQFGYKTEADCDASRIAVEAQEPGTQSQSWCVPIVKPEKLNNQKPHKRKLVRKARRNSSLHLASR
Ga0184608_100178144	3300018028	Groundwater Sediment	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKATPKKRKPARSAKRR
Ga0190269_102815742	3300018465	Soil	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRVAVKAQHADAQSQSWCVPIPKPEKAANAKPKKRKPVRSAKRR
Ga0126371_109578063	3300021560	Tropical Forest Soil	MVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNAQQADATAQSWCVPIPKPEKAVKARSRKHTARR
Ga0207710_100192263	3300025900	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR
Ga0207645_109964451	3300025907	Miscanthus Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR
Ga0207686_105821961	3300025934	Miscanthus Rhizosphere	WGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCMPIPKPEKAAKSKPKRKPARSARRR
Ga0207669_107537202	3300025937	Miscanthus Rhizosphere	LVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR
Ga0207712_117817362	3300025961	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKTKKRKPVRSAKP
Ga0208890_10020952	3300027523	Soil	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKAKPKTRKPVRSAKRR
Ga0208324_10322633	3300027604	Peatlands Soil	MTTIWAWCLVFVISGQQPIVQFDYKTEADCDASRIAVKAQQPDTQSQSWCVPIVKPDKLNSQKANKRKLVRKAKRRSSPRLASR
Ga0208827_10024609	3300027641	Peatlands Soil	MSSDRAGVVSLTTIWAWCLVFVISGQQPIVQFDYKTEADCDASRIAVKAQQPDTQSQSWCVPIVKPDKLNSQKANKRKLVRKAKRRSSPRLASR
Ga0209971_11380582	3300027682	Arabidopsis Thaliana Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQYADAASQSWCVPIPKPEKAANAKPKKR
Ga0209998_100375124	3300027717	Arabidopsis Thaliana Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQYADAASQSWCVPIPKPEKAAKAKPKKRKPL
Ga0268265_120535162	3300028380	Switchgrass Rhizosphere	MVTIWGWCLVFLIAGQQPIVQFDYKTEAHCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKSKPKRKPARSARRR
Ga0307308_105536141	3300028884	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR
Ga0307498_101048753	3300031170	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAVKANPRKRKPVRSAKRR
Ga0307498_102304571	3300031170	Soil	QFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPARSARRR
Ga0307497_101995211	3300031226	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPARSARRR
Ga0307505_104348212	3300031455	Soil	GQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKR
Ga0310887_102164482	3300031547	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR
Ga0310915_103812902	3300031573	Soil	MTTIWAWCLVFIISGQQPIVQFDYETEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSPHSARR
Ga0306917_100692997	3300031719	Soil	MVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNEQHADATAQSWCVPIPKPEKAVRAKSKSKKRHIARRQ
Ga0306917_103293832	3300031719	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPAKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0307469_102861333	3300031720	Hardwood Forest Soil	KTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKAKPKKWKPVRSAKRR
Ga0307469_108068041	3300031720	Hardwood Forest Soil	MVTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKAKPKKRKPVRSA
Ga0307468_1021795952	3300031740	Hardwood Forest Soil	MTIWGWCLVFVIAGQQPIVQFDYKTEADCDASRIAVKAQHADAASQSWCVPIPKPEKAAKAKPNKRKPVRSAKRR
Ga0310917_112159321	3300031833	Soil	GVAMTTIWAWCLVFIISGQQPIVQFDYKTEADCYASRIAVEAQQPGAQSQSWCVPIVKPAKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0306925_119396581	3300031890	Soil	MSSRPRGGAMTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSPHSARR
Ga0306923_101935145	3300031910	Soil	VVTIWGWCLVFVLAGQQPIVQFDYKTEADCNTSRIAVNEQHADATAQSWCVPIPKPEKAVRAKSKSKKRHIARRQ
Ga0306921_102747912	3300031912	Soil	MTTIWAWCLVFIISGQQPIVQFDYKTEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0310916_104319043	3300031942	Soil	MTTIWAWCLVFIISGQQPIVQFDYETEADCDASRIAVEAQQPGAQSQSWCVPIVKPAKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0306922_123327641	3300032001	Soil	MTTIWAWCLVFIISGQQPIVQFDYETEADCDASRIAVEAQQPGAQSQYWCVPIVKPEKLDNQKHNK
Ga0310897_103790712	3300032003	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPARSAKRR
Ga0310902_104241831	3300032012	Soil	PIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR
Ga0310899_101385991	3300032017	Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCNASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR
Ga0310890_100575195	3300032075	Soil	MVTIWGWCLVFLIVGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKANPRKRKPVRSAKRR
Ga0307471_1020371311	3300032180	Hardwood Forest Soil	FLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKKRKPVRSAKP
Ga0310914_113619542	3300033289	Soil	MTTIWAWCLVFIISGQQPIVQFDYETEADCDASRIAVEAQQPGAQSQSWCVPIVKPEKLDNQKHNKRKLVRKVKRHSSLHSARR
Ga0326726_111862841	3300033433	Peat Soil	LIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKR
Ga0326723_0229247_633_824	3300034090	Peat Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKP
Ga0326723_0263362_593_769	3300034090	Peat Soil	PIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR
Ga0373948_0214977_193_420	3300034817	Rhizosphere Soil	MVTIWGWCLVFLIAGQQPIVQFDYKTEADCDASRIAVKAQHEDAAAQSWCVPIPKPEKAAKAKPKRKPVRSAKRR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084690

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences