| Basic Information | |
|---|---|
| Family ID | F084615 |
| Family Type | Metagenome / Metatranscriptome |
| Number of Sequences | 112 |
| Average Sequence Length | 51 residues |
| Representative Sequence | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSL |
| Number of Associated Samples | 103 |
| Number of Associated Scaffolds | 112 |
| Quality Assessment | |
|---|---|
| Transcriptomic Evidence | Yes |
| Most common taxonomic group | Unclassified |
| % of genes with valid RBS motifs | 0.00 % |
| % of genes near scaffold ends (potentially truncated) | 0.00 % |
| % of genes from short scaffolds (< 2000 bps) | 0.00 % |
| Associated GOLD sequencing projects | 100 |
| AlphaFold2 3D model prediction | Yes |
| 3D model pTM-score | 0.67 |
| Hidden Markov Model |
|---|
| Powered by Skylign |
| Most Common Taxonomy | |
|---|---|
| Group | Unclassified (100.000 % of family members) |
| NCBI Taxonomy ID | N/A |
| Taxonomy | N/A |
| Most Common Ecosystem | |
|---|---|
| GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (17.857 % of family members) |
| Environment Ontology (ENVO) | Unclassified (33.929 % of family members) |
| Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (64.286 % of family members) |
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| Predicted Topology & Secondary Structure | |||||
|---|---|---|---|---|---|
| Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 13.16% β-sheet: 27.63% Coil/Unstructured: 59.21% | Feature Viewer |
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| Powered by Feature Viewer | |||||
| Structure Viewer | |
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| Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.67 |
| Powered by PDBe Molstar | |
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| Pfam ID | Name | % Frequency in 112 Family Scaffolds |
|---|---|---|
| PF03548 | LolA | 89.29 |
| PF13432 | TPR_16 | 1.79 |
| PF14559 | TPR_19 | 1.79 |
| PF13414 | TPR_11 | 0.89 |
| PF13460 | NAD_binding_10 | 0.89 |
| PF07719 | TPR_2 | 0.89 |
| COG ID | Name | Functional Category | % Frequency in 112 Family Scaffolds |
|---|---|---|---|
| COG2834 | Outer membrane lipoprotein-sorting protein | Cell wall/membrane/envelope biogenesis [M] | 89.29 |
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| Name | Rank | Taxonomy | Distribution |
| Unclassified | root | N/A | 100.00 % |
| Visualization |
|---|
| Powered by ApexCharts |
| Scaffold | Taxonomy | Length | IMG/M Link |
|---|
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| Habitat | Taxonomy | Distribution |
| Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 17.86% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 17.86% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 13.39% |
| Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 7.14% |
| Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 4.46% |
| Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 3.57% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 3.57% |
| Soil | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil | 2.68% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 2.68% |
| Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 2.68% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.68% |
| Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 1.79% |
| Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil | 1.79% |
| Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.79% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.79% |
| Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.89% |
| Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 0.89% |
| Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.89% |
| Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 0.89% |
| Soil | Environmental → Terrestrial → Soil → Loam → Grasslands → Soil | 0.89% |
| Corn Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere | 0.89% |
| Host-Associated | Host-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Avena Fatua Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Arabidopsis Thaliana Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
| Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 0.89% |
| Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere | 0.89% |
| Visualization |
|---|
| Powered by ApexCharts |
| Taxon OID | Sample Name | Habitat Type | IMG/M Link |
|---|---|---|---|
| 3300000363 | Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil | Environmental | Open in IMG/M |
| 3300000955 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
| 3300004139 | Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF230 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300004463 | Combined assembly of Arabidopsis thaliana microbial communities | Host-Associated | Open in IMG/M |
| 3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
| 3300004801 | Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-3 (Metagenome Metatranscriptome) | Host-Associated | Open in IMG/M |
| 3300005175 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 | Environmental | Open in IMG/M |
| 3300005177 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 | Environmental | Open in IMG/M |
| 3300005178 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 | Environmental | Open in IMG/M |
| 3300005179 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133 | Environmental | Open in IMG/M |
| 3300005290 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1 | Host-Associated | Open in IMG/M |
| 3300005295 | Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 | Environmental | Open in IMG/M |
| 3300005332 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300005439 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG | Environmental | Open in IMG/M |
| 3300005447 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 | Environmental | Open in IMG/M |
| 3300005451 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 | Environmental | Open in IMG/M |
| 3300005535 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG | Environmental | Open in IMG/M |
| 3300005558 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147 | Environmental | Open in IMG/M |
| 3300005561 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 | Environmental | Open in IMG/M |
| 3300005576 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 | Environmental | Open in IMG/M |
| 3300005586 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140 | Environmental | Open in IMG/M |
| 3300005719 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 | Host-Associated | Open in IMG/M |
| 3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
| 3300005836 | Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.42_YBB | Environmental | Open in IMG/M |
| 3300006031 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100 | Environmental | Open in IMG/M |
| 3300006032 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 | Environmental | Open in IMG/M |
| 3300006173 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG | Environmental | Open in IMG/M |
| 3300006196 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 | Host-Associated | Open in IMG/M |
| 3300006796 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 | Environmental | Open in IMG/M |
| 3300006844 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2 | Host-Associated | Open in IMG/M |
| 3300006854 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4 | Host-Associated | Open in IMG/M |
| 3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
| 3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
| 3300006969 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 | Host-Associated | Open in IMG/M |
| 3300007076 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4 | Host-Associated | Open in IMG/M |
| 3300009100 | Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2 | Host-Associated | Open in IMG/M |
| 3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
| 3300009678 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100 | Environmental | Open in IMG/M |
| 3300010046 | Tropical forest soil microbial communities from Panama - MetaG Plot_36 | Environmental | Open in IMG/M |
| 3300010047 | Tropical forest soil microbial communities from Panama - MetaG Plot_30 | Environmental | Open in IMG/M |
| 3300010087 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010095 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010124 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010132 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_16_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010134 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_2_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010141 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300010304 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09182015 | Environmental | Open in IMG/M |
| 3300010336 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015 | Environmental | Open in IMG/M |
| 3300010358 | Tropical forest soil microbial communities from Panama - MetaG Plot_3 | Environmental | Open in IMG/M |
| 3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
| 3300010360 | Tropical forest soil microbial communities from Panama - MetaG Plot_6 | Environmental | Open in IMG/M |
| 3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
| 3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
| 3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
| 3300010399 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3 | Environmental | Open in IMG/M |
| 3300010400 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2 | Environmental | Open in IMG/M |
| 3300010401 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1 | Environmental | Open in IMG/M |
| 3300011120 | Combined assembly of Microbial Forest Soil metaT | Environmental | Open in IMG/M |
| 3300011436 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT642_2 | Environmental | Open in IMG/M |
| 3300012173 | Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT517_2 | Environmental | Open in IMG/M |
| 3300012205 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG | Environmental | Open in IMG/M |
| 3300012208 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG | Environmental | Open in IMG/M |
| 3300012212 | Combined assembly of Hopland grassland soil | Host-Associated | Open in IMG/M |
| 3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
| 3300012362 | Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG | Environmental | Open in IMG/M |
| 3300012379 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012390 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012392 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012396 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012397 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012399 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_24_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012400 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_4_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012406 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_4_1 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012410 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| 3300012898 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S194-509B-1 | Environmental | Open in IMG/M |
| 3300012948 | Tropical forest soil microbial communities from Panama - MetaG Plot_14 | Environmental | Open in IMG/M |
| 3300014745 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5-5 metaG | Host-Associated | Open in IMG/M |
| 3300014969 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG | Host-Associated | Open in IMG/M |
| 3300015245 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
| 3300015358 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG | Environmental | Open in IMG/M |
| 3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
| 3300015372 | Soil combined assembly | Host-Associated | Open in IMG/M |
| 3300015373 | Combined assembly of cpr5 rhizosphere | Host-Associated | Open in IMG/M |
| 3300015374 | Col-0 rhizosphere combined assembly | Host-Associated | Open in IMG/M |
| 3300016270 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 | Environmental | Open in IMG/M |
| 3300017657 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015 | Environmental | Open in IMG/M |
| 3300018082 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b2 | Environmental | Open in IMG/M |
| 3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
| 3300020581 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M | Environmental | Open in IMG/M |
| 3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
| 3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
| 3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
| 3300026306 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102 (SPAdes) | Environmental | Open in IMG/M |
| 3300026323 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130 (SPAdes) | Environmental | Open in IMG/M |
| 3300026343 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144 (SPAdes) | Environmental | Open in IMG/M |
| 3300026528 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes) | Environmental | Open in IMG/M |
| 3300026547 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes) | Environmental | Open in IMG/M |
| 3300027646 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio (SPAdes) | Environmental | Open in IMG/M |
| 3300027886 | Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost (SPAdes) | Environmental | Open in IMG/M |
| 3300031231 | Coassembly Site 11 (all samples) - Champenoux / Amance forest | Environmental | Open in IMG/M |
| 3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
| 3300031941 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080 | Environmental | Open in IMG/M |
| 3300034643 | Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_120 (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
| Geographical Distribution | |
|---|---|
| Zoom: | Powered by OpenStreetMap |
| ⦗Top⦘ |
| Protein ID | Sample Taxon ID | Habitat | Sequence |
| ICChiseqgaiiFebDRAFT_133060782 | 3300000363 | Soil | MEFVCKYAKASGEVVRVVQVGQNAEEVKHRLQEQGFLPISVKARGRSL |
| JGI1027J12803_1002635141 | 3300000955 | Soil | MEFTVKYAKPTGEVIKGVLVGQNPDEVRHRLQEQGFLPI |
| Ga0058897_109852413 | 3300004139 | Forest Soil | MEFNCKYAKPTGEILTDVVVGQSMEEVRHHLQEQGFLPINIRPRGWSLSFRSQKRHQAIKT* |
| Ga0063356_1044759581 | 3300004463 | Arabidopsis Thaliana Rhizosphere | MEFSCKYTKPTGEVVTAVLVGQNIDEVRHRLNDQGLLPIFIRPR |
| Ga0066395_107101972 | 3300004633 | Tropical Forest Soil | MEFSCKYAKPTGEVVTTVLVGQNMDEVRHRLQEQGFLPLDVHPRGWSVSFR |
| Ga0058860_115683372 | 3300004801 | Host-Associated | MEFDCKYAKPSGEIVTATLVGQTLEEVRHHLQEQGLLPISVRQKGW |
| Ga0066673_106560861 | 3300005175 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMDIR |
| Ga0066690_109841592 | 3300005177 | Soil | MEFSCKYTKPTGEVVTAVLVGQNMEEVRHRLNEQGLLPISIRPRGWSISLRPR |
| Ga0066688_105660662 | 3300005178 | Soil | MEFTCKYAKPSGEVVKAVLAGQTMEEVRHHLQEQGLLPMEIRPRGWSFSIRPRRRRQTIKAD |
| Ga0066684_106756902 | 3300005179 | Soil | MEFTVKYAKPTGEVVKTVLIGQNMEEVRHRLQEQGMLPISVRP |
| Ga0065712_101049094 | 3300005290 | Miscanthus Rhizosphere | MEFDCKYAKPSGEIVTATLVGQTLDEVRHHLQEQGLLPISVRQ |
| Ga0065707_102146961 | 3300005295 | Switchgrass Rhizosphere | MEFTVKYAKPSGEVVTSVVVGQNPDEVRHRLQEQGFLPIAVRSRNWSFSLRRKRRQTIKPEDFILFNQQ |
| Ga0066388_1076499861 | 3300005332 | Tropical Forest Soil | MEFTVKYAKPTGEVIKAVLVGQNSDEVRHRIQEQGFLPIDVRSRSFEFSLHPRRRQKVKSEDFIL |
| Ga0070711_1018200462 | 3300005439 | Corn, Switchgrass And Miscanthus Rhizosphere | MEFNCKYAKPTGEVMTAVVVGQNIAEVRHHLQEQGLLPINIRARGWSLSLRSRKRRQTMKAEDFILFNQQ |
| Ga0066689_102972341 | 3300005447 | Soil | MEFTCKYAKPSGEVVKVVLVGQNTDEVRHRLQEQGFLPISIRTRGWSISFRPR |
| Ga0066681_102617821 | 3300005451 | Soil | MEFTCKYAKPSGEVVKVVLVGQNTDEVRHRLQEQGFLPISIRTR |
| Ga0070684_1006150962 | 3300005535 | Corn Rhizosphere | MEFSCRYAKPTGEVVKTVLVGQNMEEVRHHLQEQGLLPIAIRPRGWSISLRR |
| Ga0066698_109457981 | 3300005558 | Soil | MEFTCKYAKPSGEVVKAVLVGQNKDEVRHHLQEQGLLPMDIRPRGWSLSLRPRKRPQAI |
| Ga0066699_111928662 | 3300005561 | Soil | MEFTCKYAKPSGEVVKAVFVGQNIDEVRHHLHEQGLLPMEIRPRGWSLSFRPRKRPQ |
| Ga0066708_103363823 | 3300005576 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGVLPMDIRPRGWSLSLRPR |
| Ga0066691_106181781 | 3300005586 | Soil | MEFTCRYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMAIRPRG |
| Ga0068861_1026976102 | 3300005719 | Switchgrass Rhizosphere | MEFRVKYAKPTGEVMKAVLVGQSTDEVRHRLQEQGFLPIDVRTRGWTLSLRPRKRQ |
| Ga0066903_1017179083 | 3300005764 | Tropical Forest Soil | MEFSCKYAKPTGEVVTTVLVGQNLDEVRHRLQEQGFLPLDVH |
| Ga0074470_111681811 | 3300005836 | Sediment (Intertidal) | MEFDCKYAKPNGEIVTVRQVGQSMEEVRHHLQDQGLLP |
| Ga0066651_107725122 | 3300006031 | Soil | MEFSCKYTKPTGEVVSAVLVGQNIEEVRHRLNELGLLPISIRPRGWSISLRPRKG |
| Ga0066651_107924812 | 3300006031 | Soil | MEFTCKYAKPSGEVVKAVLAGQTIEEVRHHLQEQGLLPMEIRPRGWSFSIRPRRRRQ |
| Ga0066696_102646391 | 3300006032 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMDIRPRGWSLSLRPRKR |
| Ga0070716_1010133422 | 3300006173 | Corn, Switchgrass And Miscanthus Rhizosphere | MEFSCKYTKPTGEVVTAVLVGQNIEEVRHRLNDQGLLPISIRPRGWSISLRP |
| Ga0075422_103489902 | 3300006196 | Populus Rhizosphere | MEFDCKYAKPSGEVITATLVGQNLEEVRHHLQEQGLLPIS |
| Ga0066665_110617502 | 3300006796 | Soil | MEFTCKYARPSGEIVKAVLAGQNVEEVRHHLQEQGLLPIQIRPRGWSLSFRPRKRRQTIKTEDFILFN |
| Ga0075428_1023255221 | 3300006844 | Populus Rhizosphere | MEFTVKYAKPTGEVVKSVLVGQTVEEVRHRLHEQGLLPIQIRSRGWSISL |
| Ga0075425_1016715132 | 3300006854 | Populus Rhizosphere | MEFTCKYAKPSGEVVRAVLAGQTIDEVRHHLQEQGLLPMEIRPRGWSLSFRPRRRRQTIKADDFILF |
| Ga0075434_1003797311 | 3300006871 | Populus Rhizosphere | MEFTVKYAKPTGEVIKSVLVGQNPDEVRHRLQEQGFLPIAIRSRGWSLSLRPRKRR |
| Ga0075436_1013322241 | 3300006914 | Populus Rhizosphere | MEYTVKYAKPTGEVVKSVLVGQSTDEVRHRLQEQGFLPIAIQSREWSFSLRP |
| Ga0075419_105340041 | 3300006969 | Populus Rhizosphere | MEFDCKYAKPSGEIVTATLVGQTLDEVRHHLQEQGLLPISVRQKGWALN |
| Ga0075435_1010632492 | 3300007076 | Populus Rhizosphere | MEFTVKYAKPTGEVVKGVLVGQSTDEVRHRLQEQGFLPIKINSRDWSFS |
| Ga0075418_115542712 | 3300009100 | Populus Rhizosphere | MEFSCKYTKPTGEVVTAVLVGQNIEEVRHRLNEQGLLPISV |
| Ga0105242_128361831 | 3300009176 | Miscanthus Rhizosphere | MEFRVKYAKPTGEVMKAVLVGQSTEEVRHRLQEQGFLPIDVRTRGWTLSFSTRKRQQSIKTEDFILFNQ |
| Ga0105252_104522321 | 3300009678 | Soil | MEFDCRYAKPSGEIVQVTQNGQSLEEVRHRLQEQGLLPISVKAK |
| Ga0126384_104260242 | 3300010046 | Tropical Forest Soil | MEFTCRYTKPTGEVVRTVLVGQNLDEVRHRLQEQGLLPIDIRPRGWSFSPRRRQR |
| Ga0126382_103874411 | 3300010047 | Tropical Forest Soil | MEFTVKYAKPTGEVIKGVLVGQNPDEVRHRLQEQGFLPIAIHSRG |
| Ga0126382_117863272 | 3300010047 | Tropical Forest Soil | MEFRVKYAKPTGEVMKAVLVGQSTEEVRHRLQEQGFLPIDVRSRGWTLSLR |
| Ga0126382_121911301 | 3300010047 | Tropical Forest Soil | MEFTVKYAKPTGEVVKSVLVGQTVEEVRHRLHEQGLLPIQIRSRGWSISFRSRKREHKIKTEDFI |
| Ga0127492_11066901 | 3300010087 | Grasslands Soil | MEFTCRYAKPSGEVVKAVLVGQNIDEVRHHLQEQGL |
| Ga0127475_11115722 | 3300010095 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLL |
| Ga0127498_10678572 | 3300010124 | Grasslands Soil | MEFNCKYAKPSGEVVKAVLVGQNMDEVQHRLQEQGFLPMAIRPRGGWSIS |
| Ga0127455_11630451 | 3300010132 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLL |
| Ga0127484_11643681 | 3300010134 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMDIRPRGW |
| Ga0127499_10204231 | 3300010141 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGVLPMDIRPRGWSLSLRPRRRPQAIKDEDFIL |
| Ga0134088_100522601 | 3300010304 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGVLPMDIRPRGWSLS |
| Ga0134071_107468912 | 3300010336 | Grasslands Soil | MEFTCKYAKPSGEVVKVVLAGQNTDEVRHRLQEQGLLPISIRTRGWSISL |
| Ga0126370_102245461 | 3300010358 | Tropical Forest Soil | MEFNCKYAKPTGEIMTAVVVGQNMEEVRHNLQEQGLLPINVRPRGWSF |
| Ga0126376_121445131 | 3300010359 | Tropical Forest Soil | MEFTCKYAKPNGEVIKAVLVRQSTEEVRHHLQEQGL |
| Ga0126372_116641491 | 3300010360 | Tropical Forest Soil | MEFSCKYAKPTGEVVTTVLVGQNMDEVRHRLQEQGFLPLDVHPRAWSVSFRRRKRQQTVKPDDFI |
| Ga0126372_119746391 | 3300010360 | Tropical Forest Soil | MEFTCKYAKPTGEVIKTVLVGQTMQEVRHHLQEQGLLPIDIRPRGWSISFRKRKQQTIKSDDFILYNQQ |
| Ga0126377_132431892 | 3300010362 | Tropical Forest Soil | MEFTCKYAKPSGEVIRAVLVGQNVDEVRHHLQEQGLLPMDIRPRGWSLSLRPRKRP |
| Ga0126379_109191753 | 3300010366 | Tropical Forest Soil | MEYSCKYAKPTGEVVTTVLVGQNMDEVRHRLQEQGFLPLDVHPRAWSVSFRRRKRQQTVKPDDFLLFNQ |
| Ga0126379_131725522 | 3300010366 | Tropical Forest Soil | MEFTVKYAKPTGEVVKSVLVGQNSDEVRHRIQEQGFLPIDIRSRSFEFSLRPRRRQKVKS |
| Ga0126381_1038551771 | 3300010376 | Tropical Forest Soil | MEFTVKYAKPTGEVIKSVLVGQNTDEVRHRLQEQGFL |
| Ga0134127_135809422 | 3300010399 | Terrestrial Soil | MEFTVKYAKPTGEVVKSVLVGQNLEEVRHRLQEQGLLPIDIRPKGFSIS |
| Ga0134122_102727491 | 3300010400 | Terrestrial Soil | MEFRVKYAKPTGEVMKAVLVGQSTEEVRHRLQEQGFLP |
| Ga0134121_104408661 | 3300010401 | Terrestrial Soil | MEFNVKYAKQSGEVVTATLIGQNMDEVRHRLQEQGFLPITVRSKTFSLRPR |
| Ga0150983_108246372 | 3300011120 | Forest Soil | MEFTVKYAKPTGEVVKTALVGQNAEEVRHHLQEQGMLP |
| Ga0137458_11372131 | 3300011436 | Soil | MEFDCRYAKPSGEIVQVTQNGQSLEEVRHRLQEQGLLPISVKPKGWARALG |
| Ga0137327_10092921 | 3300012173 | Soil | MEFRVKYAKPTGEVVKVVLVGQNTDEVRHRLQEQGFLPIAIRSRRALSLRPQKRQQTIKRDDFILF |
| Ga0137362_102516313 | 3300012205 | Vadose Zone Soil | MEFNCKYAKPSGEVVKAVLVGQSMDEVQHRLQEQGFLPMAIRPRGWSISLRRRKRQETVKSEDFIMF |
| Ga0137376_106847081 | 3300012208 | Vadose Zone Soil | MEFTCKYAKPSGEVVKAVLVGQNKDEVRHHLQEQGLLPM |
| Ga0150985_1221438272 | 3300012212 | Avena Fatua Rhizosphere | MEYSVKYAKPTGEIVKAVLVGQNMEEVRHRLQEQGFLPIDVSTRSWSLPLRPRK |
| Ga0137384_104226173 | 3300012357 | Vadose Zone Soil | MEFTCRYAKPTGEIVKAVLVGQNMEEVQHRLQEQGLLPIAIRP |
| Ga0137361_108459251 | 3300012362 | Vadose Zone Soil | MEFTCKYARPSGEIVKAVLAGQNVEEVRHHLQEQGLLPIQIR |
| Ga0134058_10434671 | 3300012379 | Grasslands Soil | MEFTCKYARPSGEIVKAVLAGQNVEEVRHHLQEQGLLPIQIRP |
| Ga0134054_12157353 | 3300012390 | Grasslands Soil | MEFTCKYAKPSGEVVKAVLVGQNMDEVRHHLQEQG |
| Ga0134043_10434432 | 3300012392 | Grasslands Soil | MEFTFKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMDIRPRGWSLSLRPRKRPQAIKDE |
| Ga0134057_12830921 | 3300012396 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSLSLRP |
| Ga0134056_11387903 | 3300012397 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSLSLRPRKRPQAIKDE |
| Ga0134061_12179861 | 3300012399 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSL |
| Ga0134048_11124471 | 3300012400 | Grasslands Soil | MEFTCKYAKPSGEVVKAVLVGQNKDEVRHHLQEQG |
| Ga0134053_10338921 | 3300012406 | Grasslands Soil | MEFTCKYAKPSGEVVKAVLVGQNMDEVRHHLQEQGLLPMEIR |
| Ga0134060_11577011 | 3300012410 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMDIRPRGWSLSLRPRRRPQAIK |
| Ga0157293_100903881 | 3300012898 | Soil | MEFDCKYAKPSGEIVTATLVGQTLDEVRHHLQEQGLLPISVRQKGWALNLK |
| Ga0126375_101859264 | 3300012948 | Tropical Forest Soil | MEFTCKYAKPSGEVVKAVFVGQNMDEVRHHLQEQGLLPMEIRARGWSLSFRPRKRPLAIKKEDFILFNQQF |
| Ga0126375_105680952 | 3300012948 | Tropical Forest Soil | MEFTVKYAKPSGEVVTATLVGQNTDEVRHRLHEQGFLPIDIRTRGFSFS |
| Ga0157377_116597902 | 3300014745 | Miscanthus Rhizosphere | VEFDCRYAKPSGEIVQVTQNGQSLEEVRHRLQEQGLLPISVRAKGWSLSLG |
| Ga0157376_118355793 | 3300014969 | Miscanthus Rhizosphere | MEFIVRYAKPTGEIVKSVHVGQTVDDVRHRLQEQGFLPMSVRPRGWSFSLAPRRRRDE |
| Ga0137409_113926871 | 3300015245 | Vadose Zone Soil | MEFTCKYAKPSGEVVKAVLAGQTIDEVRHHLQEQGLLPMEIRPRGWSFSIRPRRRRQTIKADDFILTVFTSSPSS* |
| Ga0134089_101473192 | 3300015358 | Grasslands Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSLSLRPRKR |
| Ga0134089_101970962 | 3300015358 | Grasslands Soil | MEFTCKYAKPSGEVVKVVLVAQNTDEVRHRLQEQGFLPISIRTRGWSLSLRPRMMRWEYKNPE |
| Ga0132258_136951113 | 3300015371 | Arabidopsis Rhizosphere | MEFVCKYAKASGEVVTAVQVGQNAEEVKHRLQEQGFLPISVKARGWSLSAATSSRC |
| Ga0132256_1038573022 | 3300015372 | Arabidopsis Rhizosphere | MEFVCKYAKATGEVVKVVQVGQNADDVRHRLQEQGFLPISVEPRGWSLS |
| Ga0132257_1013263122 | 3300015373 | Arabidopsis Rhizosphere | MEFTVKYAKPTGEVVKSVLVGQTVEEVRHRLHEQGLLPIQIRSRGWSISFRSRKREHKI |
| Ga0132257_1029206911 | 3300015373 | Arabidopsis Rhizosphere | MEFTVKYAKPTGEVVKSVLAGQNSDEVRHRIQEQGFLPIDI |
| Ga0132255_1005915771 | 3300015374 | Arabidopsis Rhizosphere | MEFTVKYAKPSGETVTATLVGQNTEEVRHHLQEQGFLPIDIRSRGWAFSLQPRKRHQTIKPDDFILFNQQFV |
| Ga0182036_104660171 | 3300016270 | Soil | MEFSCKYAKPTGEIVKTVLVGQNIEEVRHRLQEQGLLPIDVHPRGWSISFRRQKRQQTIKPEDFILFNQQ |
| Ga0134074_11425212 | 3300017657 | Grasslands Soil | MEFTCKYAKPSGEVVKVVLVGQNTDEVRHRLQEQGFLPISIRTRGWSISFRPRRRETIK |
| Ga0184639_102452672 | 3300018082 | Groundwater Sediment | MEFSCKYTKPTGEVVKAVLVGQNIDEVRHRLHEQGLLPISVRPRGWS |
| Ga0173479_101612962 | 3300019362 | Soil | MEFDCKYAKPSGEIVTATLVGQTLDEVRHHLQEQGLLPISV |
| Ga0210399_107180722 | 3300020581 | Soil | MEFTVKYAKPTGEVIKTVLVGLNVEEVRHHLQEQGMLPITVRSR |
| Ga0126371_117962371 | 3300021560 | Tropical Forest Soil | MEFTVKYAKPTGEVIKSVLIGQNTDEVRHRLQEQGFLPIAIRSRGWTFSLRPRKRRQTVKPDDFILFNQQ |
| Ga0207680_102045583 | 3300025903 | Switchgrass Rhizosphere | MEFDCKYAKPSGEIVTATLVGQTLEEVRHHLQEQGLLPISVR |
| Ga0207704_114358772 | 3300025938 | Miscanthus Rhizosphere | MEFDCKYAKPSGEIVSATLVGQTLDEVRHHLQEQGLLPISVR |
| Ga0209468_11528582 | 3300026306 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIR |
| Ga0209472_11000783 | 3300026323 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGLLPMAIRPRG |
| Ga0209159_10908241 | 3300026343 | Soil | MEFTCKYAKPSGEVVKVVLVGQNTDEVRHRLQEQGFLPISIRTRGWSISFRPRRRETIKPDDFIHFNQQFI |
| Ga0209378_10205521 | 3300026528 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIEEVRHHLQEQGVLPMDIRPRGWSLSLRPRRRPQAIKDEDFILFNQ |
| Ga0209156_101249201 | 3300026547 | Soil | MEFTCKYAKPSGEVIKAVLVGQNIDEVRHHLQEQGLLPMDIRPRGWSLSLRPRKRPQAIKDEDFIL |
| Ga0209466_10639112 | 3300027646 | Tropical Forest Soil | MEFTVKYAKPTGEVIKSVLVGQNPDEVRHRLQEQGFLPIA |
| Ga0209486_101769391 | 3300027886 | Agricultural Soil | MEFDCKYAKPSGEIVTATVAGQSLEEVRHHLQEQGLLPISVR |
| Ga0170824_1124507781 | 3300031231 | Forest Soil | MEFTCRYTKPTGEVVRAVLVGQNMEEVRHRLHEQGLLPIDIRPRGWSF |
| Ga0306921_117096081 | 3300031912 | Soil | MEFSCKYAKPTGEIVKTVLVGQNIEEVRHRLQEQGLLPI |
| Ga0306921_126816571 | 3300031912 | Soil | MEFSCKYAKSTGEIVKTVVVGQNIEEVRHRLQEQGLLPIDVRPRGWSISFRRQKRQQSIKPEDFILFN |
| Ga0310912_103846841 | 3300031941 | Soil | MEFTVKYAKPTGEVVKAVLVGQNSDEVRHRIQEQGFLPIDV |
| Ga0370545_052633_676_795 | 3300034643 | Soil | MEFSCKYTKPTGEVVTAVLVGQNIEEVRHRLNEQGLLPIS |
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Bioinformatics & Integrated Biology Lab Institute for Fundamental Biomedical Research Biomedical Sciences Research Center "Alexander Fleming" |