Metagenome / Metatranscriptome Family F084596

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084596
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	88 residues
Representative Sequence	MAHVLAYLPKEENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAV
Number of Associated Samples	95
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	89.19 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	92.86 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.47

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (97.321 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (9.821 % of family members)
Environment Ontology (ENVO)	Unclassified (31.250 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (52.679 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 13.33% β-sheet: 28.33% Coil/Unstructured: 58.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.47
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.47
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF02668	TauD	15.18
PF00884	Sulfatase	1.79
PF07883	Cupin_2	0.89
PF00582	Usp	0.89
PF13561	adh_short_C2	0.89
PF04392	ABC_sub_bind	0.89
PF09356	Phage_BR0599	0.89
PF06742	DUF1214	0.89
PF03144	GTP_EFTU_D2	0.89
PF00892	EamA	0.89
PF04166	PdxA	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG2175	Taurine dioxygenase, alpha-ketoglutarate-dependent	Secondary metabolites biosynthesis, transport and catabolism [Q]	15.18
COG1995	4-hydroxy-L-threonine phosphate dehydrogenase PdxA	Coenzyme transport and metabolism [H]	0.89
COG2984	ABC-type uncharacterized transport system, periplasmic component	General function prediction only [R]	0.89
COG5361	Uncharacterized conserved protein	Mobilome: prophages, transposons [X]	0.89
COG5402	Uncharacterized protein, contains DUF1214 domain	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	97.32 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	90.18 %
Unclassified	root	N/A	2.68 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	88.39 %
Unclassified	root	N/A	2.68 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Alphaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria	58.04 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	16.96 %
Unclassified	root	N/A	2.68 %
Rhodobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.04 %
Xanthobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae	8.04 %
Unclassified	root	N/A	2.68 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.89 %
Rhodobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae	0.89 %
Bradyrhizobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae	0.89 %
Hyphomicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.04 %
Azorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium	5.36 %
Pseudolabrys	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys	2.68 %
Unclassified	root	N/A	2.68 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Rhodoplanes	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes	0.89 %
Thioclava	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thioclava	0.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.04 %
unclassified Azorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium	5.36 %
unclassified Pseudolabrys	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys	2.68 %
Unclassified	root	N/A	2.68 %
unclassified Rhodoplanes	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes	0.89 %
Thioclava indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thioclava → Thioclava indica	0.89 %
unclassified Mesorhizobium	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Name	Rank	Taxonomy	Distribution
Alphaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	58.04 %
Azorhizobium sp. 39-67-5	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	5.36 %
Pseudolabrys sp. Root1462	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	2.68 %
Unclassified	root	N/A	2.68 %
Mesorhizobium sp. YM1C-6-2	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. YM1C-6-2	0.89 %
Rhodoplanes sp. Z2-YC6860	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	0.89 %
Thioclava indica	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thioclava → Thioclava indica	0.89 %
Bradyrhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	0.89 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2170459023\|GZGNO2B02HH63W	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300000550\|F24TB_12153064	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1198	Open in IMG/M
3300000787\|JGI11643J11755_11845050	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300005093\|Ga0062594_101012754	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	800	Open in IMG/M
3300005093\|Ga0062594_102072045	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	611	Open in IMG/M
3300005147\|Ga0066821_1012231	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	640	Open in IMG/M
3300005161\|Ga0066807_1024805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	629	Open in IMG/M
3300005332\|Ga0066388_105758461	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	627	Open in IMG/M
3300005339\|Ga0070660_101377782	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300005339\|Ga0070660_101784207	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodobacterales → Rhodobacteraceae → Thioclava → Thioclava indica	524	Open in IMG/M
3300005356\|Ga0070674_100495483	All Organisms → cellular organisms → Bacteria	1017	Open in IMG/M
3300005364\|Ga0070673_101872920	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	569	Open in IMG/M
3300005434\|Ga0070709_10850908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	719	Open in IMG/M
3300005455\|Ga0070663_100032154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium	3614	Open in IMG/M
3300005530\|Ga0070679_101757693	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300005618\|Ga0068864_100491259	All Organisms → cellular organisms → Bacteria	1180	Open in IMG/M
3300005713\|Ga0066905_100584925	All Organisms → cellular organisms → Bacteria	942	Open in IMG/M
3300005834\|Ga0068851_10129038	All Organisms → cellular organisms → Bacteria	1366	Open in IMG/M
3300005843\|Ga0068860_102559705	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	530	Open in IMG/M
3300006028\|Ga0070717_11149671	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	707	Open in IMG/M
3300006047\|Ga0075024_100103931	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1249	Open in IMG/M
3300006057\|Ga0075026_100438022	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	741	Open in IMG/M
3300006057\|Ga0075026_100505686	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	696	Open in IMG/M
3300006173\|Ga0070716_101576954	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	539	Open in IMG/M
3300006174\|Ga0075014_100894659	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300006806\|Ga0079220_11343984	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	602	Open in IMG/M
3300006854\|Ga0075425_102173106	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	619	Open in IMG/M
3300006871\|Ga0075434_100973385	All Organisms → cellular organisms → Bacteria	863	Open in IMG/M
3300006903\|Ga0075426_10332191	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1115	Open in IMG/M
3300006914\|Ga0075436_100419722	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	971	Open in IMG/M
3300009093\|Ga0105240_12797291	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	501	Open in IMG/M
3300009100\|Ga0075418_11094411	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	863	Open in IMG/M
3300009147\|Ga0114129_11981617	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	705	Open in IMG/M
3300009148\|Ga0105243_10661660	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1013	Open in IMG/M
3300009156\|Ga0111538_13729299	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	528	Open in IMG/M
3300009545\|Ga0105237_11380797	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium → unclassified Mesorhizobium → Mesorhizobium sp. YM1C-6-2	711	Open in IMG/M
3300009545\|Ga0105237_11652639	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	647	Open in IMG/M
3300009553\|Ga0105249_10770353	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1025	Open in IMG/M
3300009553\|Ga0105249_13319881	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	518	Open in IMG/M
3300010043\|Ga0126380_10777515	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	780	Open in IMG/M
3300010046\|Ga0126384_10068927	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2507	Open in IMG/M
3300010047\|Ga0126382_10004307	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	6271	Open in IMG/M
3300010047\|Ga0126382_10196363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Hyphomicrobiaceae → Rhodoplanes → unclassified Rhodoplanes → Rhodoplanes sp. Z2-YC6860	1431	Open in IMG/M
3300010358\|Ga0126370_10103981	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1972	Open in IMG/M
3300010360\|Ga0126372_11932400	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	636	Open in IMG/M
3300010360\|Ga0126372_12603363	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	557	Open in IMG/M
3300010361\|Ga0126378_12420805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	599	Open in IMG/M
3300010362\|Ga0126377_11224339	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	822	Open in IMG/M
3300010362\|Ga0126377_12008104	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	654	Open in IMG/M
3300010373\|Ga0134128_12592086	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	559	Open in IMG/M
3300010399\|Ga0134127_11357692	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	781	Open in IMG/M
3300010400\|Ga0134122_10455443	All Organisms → cellular organisms → Bacteria	1145	Open in IMG/M
3300011119\|Ga0105246_10811314	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	831	Open in IMG/M
3300012499\|Ga0157350_1033260	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	584	Open in IMG/M
3300012958\|Ga0164299_10392132	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	889	Open in IMG/M
3300012961\|Ga0164302_11272837	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	593	Open in IMG/M
3300012961\|Ga0164302_11916568	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	504	Open in IMG/M
3300012984\|Ga0164309_10569223	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	879	Open in IMG/M
3300012988\|Ga0164306_10689998	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	810	Open in IMG/M
3300013296\|Ga0157374_12001565	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	606	Open in IMG/M
3300013297\|Ga0157378_10698161	Not Available	1034	Open in IMG/M
3300013306\|Ga0163162_10587514	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1240	Open in IMG/M
3300013308\|Ga0157375_13118867	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	553	Open in IMG/M
3300014968\|Ga0157379_10522937	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1101	Open in IMG/M
3300014968\|Ga0157379_10780908	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	901	Open in IMG/M
3300014968\|Ga0157379_11597805	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	636	Open in IMG/M
3300015372\|Ga0132256_100853539	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1027	Open in IMG/M
3300015372\|Ga0132256_101799455	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	721	Open in IMG/M
3300015372\|Ga0132256_102332621	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	638	Open in IMG/M
3300015372\|Ga0132256_103435074	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	532	Open in IMG/M
3300015373\|Ga0132257_103298181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	588	Open in IMG/M
3300015373\|Ga0132257_103479932	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	573	Open in IMG/M
3300015374\|Ga0132255_104725775	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	577	Open in IMG/M
3300018032\|Ga0187788_10414791	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	568	Open in IMG/M
3300018054\|Ga0184621_10158421	All Organisms → cellular organisms → Bacteria → Proteobacteria	815	Open in IMG/M
3300021560\|Ga0126371_11969392	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	702	Open in IMG/M
3300025315\|Ga0207697_10151582	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1009	Open in IMG/M
3300025898\|Ga0207692_10092635	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1642	Open in IMG/M
3300025904\|Ga0207647_10241987	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1036	Open in IMG/M
3300025912\|Ga0207707_11259736	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	596	Open in IMG/M
3300025915\|Ga0207693_10113288	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2128	Open in IMG/M
3300025916\|Ga0207663_10044694	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	2720	Open in IMG/M
3300025916\|Ga0207663_10419284	All Organisms → cellular organisms → Bacteria	1027	Open in IMG/M
3300025916\|Ga0207663_11053303	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	653	Open in IMG/M
3300025920\|Ga0207649_11513875	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	531	Open in IMG/M
3300025925\|Ga0207650_10720880	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	843	Open in IMG/M
3300025927\|Ga0207687_10339181	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	1221	Open in IMG/M
3300025928\|Ga0207700_11093097	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	713	Open in IMG/M
3300025930\|Ga0207701_10430573	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1134	Open in IMG/M
3300025931\|Ga0207644_11194056	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	639	Open in IMG/M
3300025941\|Ga0207711_10741700	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	916	Open in IMG/M
3300025986\|Ga0207658_11803472	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	558	Open in IMG/M
3300027063\|Ga0207762_1021744	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	1029	Open in IMG/M
3300027873\|Ga0209814_10074616	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1427	Open in IMG/M
3300028379\|Ga0268266_10361087	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1367	Open in IMG/M
3300028814\|Ga0307302_10548591	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	574	Open in IMG/M
3300028824\|Ga0307310_10386416	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	693	Open in IMG/M
3300031421\|Ga0308194_10400419	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	500	Open in IMG/M
3300031469\|Ga0170819_13420013	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Pseudolabrys → unclassified Pseudolabrys → Pseudolabrys sp. Root1462	1444	Open in IMG/M
3300031564\|Ga0318573_10233831	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	978	Open in IMG/M
3300031572\|Ga0318515_10021532	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	3051	Open in IMG/M
3300031679\|Ga0318561_10035877	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2421	Open in IMG/M
3300031716\|Ga0310813_10872216	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	814	Open in IMG/M
3300031740\|Ga0307468_100572955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Xanthobacteraceae → Azorhizobium → unclassified Azorhizobium → Azorhizobium sp. 39-67-5	915	Open in IMG/M
3300031846\|Ga0318512_10052592	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	1822	Open in IMG/M
3300031893\|Ga0318536_10381906	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	712	Open in IMG/M
3300031941\|Ga0310912_10396530	Not Available	1074	Open in IMG/M
3300032076\|Ga0306924_10906909	All Organisms → cellular organisms → Bacteria	974	Open in IMG/M
3300032180\|Ga0307471_101163955	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	936	Open in IMG/M
3300033433\|Ga0326726_10589236	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	1068	Open in IMG/M
3300034090\|Ga0326723_0259627	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium	775	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.93%
Host-Associated	Host-Associated	41.07%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	54.46%
Plants	Host-Associated → Plants	41.07%
Aquatic	Environmental → Aquatic	4.46%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	52.68%
Rhizosphere	Host-Associated → Plants → Rhizosphere	33.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	8.04%
Sediment	Environmental → Aquatic → Sediment	4.46%
Peat	Environmental → Terrestrial → Peat	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	38.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	20.54%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Soil	Host-Associated → Plants → Rhizosphere → Soil	12.50%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	25.00%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	20.54%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	12.50%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	8.93%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	8.04%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	5.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	3.57%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2170459023	Grass soil microbial communities from Rothamsted Park, UK - FA3 (control condition)	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300005093	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All Blocks	Environmental	Open in IMG/M
3300005147	Soil and rhizosphere microbial communities from Laval, Canada - mgLMC	Environmental	Open in IMG/M
3300005161	Soil and rhizosphere microbial communities from Laval, Canada - mgLPA	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005339	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C3-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005364	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG	Host-Associated	Open in IMG/M
3300005434	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005618	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006057	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2012	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009093	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009545	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010046	Tropical forest soil microbial communities from Panama - MetaG Plot_36	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012499	Unplanted soil (control) microbial communities from North Carolina - M.Soil.2.yng.030610	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018054	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_b1	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025912	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025915	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025925	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025927	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025930	Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Environmental	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025941	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034090	Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00N	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FA3_11314410	2170459023	Grass Soil	MANALAHMTSPDNWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSENSLIK
F24TB_121530644	3300000550	Soil	MAHALTYVTSSESWKSWKSRKKLPYQGVVKRDWVPTGRIDFATNLDGNGADADQPSEFKLLVEERRIVESIAGNENLEIQWRLAT
JGI11643J11755_118450502	3300000787	Soil	MAHALTYVTSSESWKSWKSRKKLPYQGVVKRDWVPTGRIDFATNLDGNGADADQPSEFKLLVEERRIVESIAGNENLEIQWRL
Ga0062594_1010127543	3300005093	Soil	MANALAHITSPDSWKSWRSWKKTPYQGVVKRDWVPTGRIDFATNLNGIGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSEN
Ga0062594_1020720451	3300005093	Soil	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENL
Ga0066821_10122311	3300005147	Soil	MANHMLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLREAK
Ga0066807_10248051	3300005161	Soil	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSENS
Ga0066388_1057584611	3300005332	Tropical Forest Soil	MAHALAYVTSSESWKNWKSRKKLPYQGVVKRDWVPTGRIDFATNLEGDATDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAK
Ga0070660_1013777821	3300005339	Corn Rhizosphere	MANHMLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTHYHK
Ga0070660_1017842071	3300005339	Corn Rhizosphere	VANHMLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTHYHK
Ga0070674_1004954832	3300005356	Miscanthus Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSE
Ga0070673_1018729201	3300005364	Switchgrass Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLK
Ga0070709_108509081	3300005434	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIV
Ga0070663_1000321541	3300005455	Corn Rhizosphere	MANHMLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESEQPNDFKLLVEERRIVESIAGNENLEIQWRLATLR
Ga0070679_1017576931	3300005530	Corn Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAK
Ga0068864_1004912593	3300005618	Switchgrass Rhizosphere	MANHMLSILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVES
Ga0066905_1005849251	3300005713	Tropical Forest Soil	MANALAHMTSPDNWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGDGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQY
Ga0068851_101290381	3300005834	Corn Rhizosphere	MANALAQMTSPESWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEA
Ga0068860_1025597051	3300005843	Switchgrass Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQW
Ga0070717_111496712	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLSYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKA
Ga0075024_1001039311	3300006047	Watersheds	MAHVLRYLPKAESWKNWKYENRIPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQW
Ga0075026_1004380222	3300006057	Watersheds	MAHVLRYLPKAESWKSWKYENRIPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVES
Ga0075026_1005056861	3300006057	Watersheds	MANALARITSPDSWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHK
Ga0070716_1015769542	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAG
Ga0075014_1008946591	3300006174	Watersheds	MADALTYMTSPESWGWRSWKKSPYQGVVKRDWVPTGRIDFATRLNGNAADADQPSEFKLLVEERRVVESIAGNENLEIQWRLATLKEAKAVV
Ga0079220_113439841	3300006806	Agricultural Soil	VANHMLTILSKPEAWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADRPNEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVT
Ga0075425_1021731061	3300006854	Populus Rhizosphere	VANHMLTILSKPEAWKKRSEEKRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNE
Ga0075434_1009733853	3300006871	Populus Rhizosphere	MANALAHITSPDSWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHK
Ga0075426_103321911	3300006903	Populus Rhizosphere	MAHALTYVTSSESWKSWKSRKKLPYQGVVKRDWVPTGRIDFATNLDGNGADADQPSEFKLLVEERRIVESIAGNENLEI
Ga0075436_1004197223	3300006914	Populus Rhizosphere	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEEAEQPSEFKLLVEERRIVESIAGNENLEIQW
Ga0105240_127972911	3300009093	Corn Rhizosphere	MLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFASQLNGNASDESDQPNDFKLLVEERRIVESIAGNENL
Ga0075418_110944111	3300009100	Populus Rhizosphere	MAHMVNPDILKSWIGSKKLPYQGVVKRDWVPTGRIDFATNLNGNDNPDQPCEFRLLVEERRIVESIAGNENLEIQWRAATLKEAKAVVTQ
Ga0114129_119816172	3300009147	Populus Rhizosphere	MTRNMLTILPKVEAWQKRNGGTQYQGVVKHDWVATGRIDFATHLNGDADEADQPNEFKLLVEERRVVESIAGNENL
Ga0105243_106616601	3300009148	Miscanthus Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVES
Ga0111538_137292991	3300009156	Populus Rhizosphere	MAHMVNPDILKSWIGSKKLPYQGVVKRDWVPTGRIDFATNLNGNDNPDQPCEFRLLVEERRIVESIAGNENLEIQWRLATLREAKTV
Ga0105237_113807972	3300009545	Corn Rhizosphere	MDTGEFHACEGKDTAMTHVLTFMTNPDSWKSWKKTPSQGVVKRDWVPTGRIDFATRFNGNTDDSDEPNEFKLLVEERRIVESITGNENLEIQWRLATLNEAKAVVAQYHK
Ga0105237_116526391	3300009545	Corn Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNWNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVT
Ga0105249_107703531	3300009553	Switchgrass Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLAENSL
Ga0105249_133198812	3300009553	Switchgrass Rhizosphere	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEEAEQPSEFKLLVEERRIVESIAGNENLEIQWRLA
Ga0126380_107775151	3300010043	Tropical Forest Soil	MTHHVLTMLPRRKRNGENRTPYQGVVKHDWVATGRIDFATHLNGDEAEADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAV
Ga0126384_100689273	3300010046	Tropical Forest Soil	MANALAHITSPESWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQY
Ga0126382_100043079	3300010047	Tropical Forest Soil	MANALAHITSPESWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHK
Ga0126382_101963633	3300010047	Tropical Forest Soil	MANLEVLKSWINWNKTPYQGVVKRDWVPTGRIDFGTNLSGSDDPYKPSEFKLLVEEHRIVESISGNENLEIQWRLATLREAKAVVTLYHKYLTENSLIKSVF
Ga0126370_101039813	3300010358	Tropical Forest Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKY
Ga0126372_119324001	3300010360	Tropical Forest Soil	MENKDMAHVLNYFAKAETWKGEKPYQGVVKRDWVPTGRIDFATRLNGSEDANQPSEFKLLVEERRIVESIAGNENLEIQWRLAT
Ga0126372_126033632	3300010360	Tropical Forest Soil	MAHVLNYLPKGENWKNWKSEKPYQGVVKRDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAG
Ga0126378_124208052	3300010361	Tropical Forest Soil	MANALAHITSPESWKSWKSWKKTPYQGVVKRDWVPTGRIDFATRDPVDADQPSEFKLLVEERRIVESIAGNENLEIQWRLA
Ga0126377_112243391	3300010362	Tropical Forest Soil	MTSPDSWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGDGDAEQPSEFKLLVEERRVVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLS
Ga0126377_120081042	3300010362	Tropical Forest Soil	MARHMLTILPKVEAWKKRSGESRAYQGVVKHDWVATGRIDFATHLNGNAEDEADQPNEFKLLVEERRIVESLAGNENLEIQWRLATLKEAK
Ga0134128_125920861	3300010373	Terrestrial Soil	MLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLK
Ga0134127_113576921	3300010399	Terrestrial Soil	MLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVES
Ga0134122_104554431	3300010400	Terrestrial Soil	MTSPDTWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKY
Ga0105246_108113143	3300011119	Miscanthus Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAK
Ga0157350_10332602	3300012499	Unplanted Soil	MANALAQMTSPESWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGKGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLK
Ga0164299_103921321	3300012958	Soil	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRL
Ga0164302_112728371	3300012961	Soil	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGN
Ga0164302_119165681	3300012961	Soil	MANALAHITSPDSWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSENSLIKT
Ga0164309_105692232	3300012984	Soil	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLK
Ga0164307_103090351	3300012987	Soil	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEVAEQPSEFKLLVEERRIVESIA
Ga0164306_106899981	3300012988	Soil	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNTSDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVT
Ga0157374_120015651	3300013296	Miscanthus Rhizosphere	MLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGSASEEADQPNEFKLLVEERRIVESIAGNENLEIQW
Ga0157378_106981612	3300013297	Miscanthus Rhizosphere	MLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESEQPNDFKLLVEERRIVESIAGNENLEIQWRLATLREAKAVVTQ
Ga0163162_105875141	3300013306	Switchgrass Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQ
Ga0157375_131188671	3300013308	Miscanthus Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTH
Ga0157379_105229373	3300014968	Switchgrass Rhizosphere	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEEAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKA
Ga0157379_107809083	3300014968	Switchgrass Rhizosphere	MLTILSKPESWKKKHDQSRTPYQGVVKHDWVPTGRIDFATHLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLREAKAVVT
Ga0157379_115978051	3300014968	Switchgrass Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNALDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAV
Ga0132256_1008535391	3300015372	Arabidopsis Rhizosphere	MLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLREAKAV
Ga0132256_1017994551	3300015372	Arabidopsis Rhizosphere	MAHVLNYLPRAESWKNWKNEKPYQGVVKRDWVPTGRIDFATRLNGNGEDAEQPSEFKLLVEERRIVESIA
Ga0132256_1023326212	3300015372	Arabidopsis Rhizosphere	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEEAEQPSEFKLLVEERRIVESIAGNENLEIQ
Ga0132256_1034350741	3300015372	Arabidopsis Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDECDQPNDFKLLVEERRIVESIAGNENLEIQWRLATL
Ga0132257_1032981812	3300015373	Arabidopsis Rhizosphere	MAHVLTYLPSAESWKNWKNENRTPYQGVVKRDWVPTGRIDFATRLNGNAEDAEQPNEFKLLVEERRIVESIAGNENLEIQW
Ga0132257_1034799321	3300015373	Arabidopsis Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNE
Ga0132255_1047257751	3300015374	Arabidopsis Rhizosphere	MANALAHITSPDSWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVITQYHKYLSENSLI
Ga0187788_104147911	3300018032	Tropical Peatland	MAHVLAYLPKAETWKNWKNEKRLPYQGVVKRDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLK
Ga0184621_101584211	3300018054	Groundwater Sediment	MAHVLEYMTNFESWKSWKNRKKLPYQGVVKRDWVPTGRIDFATQLNGNEDTQPSEFKLLVEERRIVESIAGNENLEIQWRLAPLGEQKPS
Ga0126371_119693921	3300021560	Tropical Forest Soil	MAHVLTYLPRAENWKKWKDDKRTPYQGVVKRDWVPTGRIDFATRLNGNSVEADQPGEFKLLVEERRIVESIAGNENLEIQWRP
Ga0207697_101515821	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLTYLPKVETLRKWKDEKQVAYQSVVKRDWVPTGRIDFATRLNGNSPDADQPSEFKLLIEERRIVESIAGSENLEIQWRPATLKEAKAVVA
Ga0207692_100926353	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVV
Ga0207647_102419872	3300025904	Corn Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAIRRCLVIA
Ga0207707_112597361	3300025912	Corn Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSEN
Ga0207693_101132881	3300025915	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLAYLPKEENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAV
Ga0207663_100446943	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MANHMLTILSKPESWKKKHDESRTPYQGVVKHDWVPTGRIDFATRLNGNASDESEQPNDFKLLVEERRIVESIAGNENLEIQWRLATLREAKAVVTQYHKYM
Ga0207663_104192841	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQ
Ga0207663_110533032	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLE
Ga0207649_115138751	3300025920	Corn Rhizosphere	MANALAQMTSPDSWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTK
Ga0207650_107208803	3300025925	Switchgrass Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASDESDQPNDFKLLVEERRIVESIAGNENLEIQWRLATLKEAKA
Ga0207687_103391814	3300025927	Miscanthus Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEE
Ga0207700_110930971	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	MANHMLSILSKPETWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTHYH
Ga0207701_104305731	3300025930	Corn, Switchgrass And Miscanthus Rhizosphere	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEEAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQ
Ga0207644_111940561	3300025931	Switchgrass Rhizosphere	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIA
Ga0207711_107417002	3300025941	Switchgrass Rhizosphere	VANHMLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNENLEIQ
Ga0207658_118034721	3300025986	Switchgrass Rhizosphere	VANHMLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNENLEIQWRLSTLKEAK
Ga0207762_10217441	3300027063	Tropical Forest Soil	MTHALTFMAHPESWRGWTSWKKLPYQGVVKRDWVATGRIDFATRLDGNAAEVDQPSEFKLLVEERRIVESIAGNENLEIQWRPATLREAKA
Ga0209814_100746161	3300027873	Populus Rhizosphere	MTRNMLTILPKVEAWKKRNGGTQYQGVVKHDWVATGRIDFATHLNGDADEADQPNEFKLLVEERRVVE
Ga0268266_103610873	3300028379	Switchgrass Rhizosphere	VANHMLTILSKPESWKKRSEENRTPYQGVVKHDWVPTGRIDFATRLNGNASEEADQPNEFKLLVEERRIVESIAGNE
Ga0307302_105485911	3300028814	Soil	MANALAHMTSPDSWKNWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYL
Ga0307310_103864162	3300028824	Soil	MAHALTYMTNPESWKSWKSRKKLPYQGVVKRDWVPTGRIDFATQLNGNEDTQPSEFKLLVEERRIVESIAGNENLEIQWRLATLR
Ga0308194_104004191	3300031421	Soil	MANALAHMTSPDNWKSWKSWKKTPYQGVVKRDWVPTGRIDFATNLNGNGDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYL
Ga0170819_134200133	3300031469	Forest Soil	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSE
Ga0318573_102338312	3300031564	Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSENSLIK
Ga0318515_100215324	3300031572	Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLS
Ga0318561_100358774	3300031679	Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLSENSL
Ga0310813_108722161	3300031716	Soil	MAHVLEYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWR
Ga0307468_1005729551	3300031740	Hardwood Forest Soil	MAHVLAYLPKVENWKNWKNEKRLPYQGVVKHDWVPTGRIDFATRLNGSAEDAEQPSEFKLLVEERRIVESIAGNENLEIQWRLA
Ga0318512_100525923	3300031846	Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQY
Ga0318536_103819061	3300031893	Soil	MANALAHMTSPDSWKGWKSWKKSPYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYH
Ga0310912_103965301	3300031941	Soil	MAHRGLTILPNAETWKKWKGEERTSYQGVVKHDWVATGRIDFATRLNGDATEAEKPSEFKLLVEERRIVESIAGNE
Ga0306924_109069091	3300032076	Soil	MAHRGLTILPNAETWKKWKGEERTSYQGVVKHDWVATGRIDFATRLNGDATEAEKPSEFKLLVEERRIVESIAGNENLEIQWRLATL
Ga0307471_1011639552	3300032180	Hardwood Forest Soil	MANALAQMTSPESWKGWKSWKKTAYQGVVKRDWVPTGRIDFATNLNGNGDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKAVVTQYHKYLAENS
Ga0326726_105892361	3300033433	Peat Soil	MAHVLTYMPTAETWKNWKNAKRLPYQGVVKRDWVPTGRIDFATRLNGNAEDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKGVVTQY
Ga0326723_0259627_524_775	3300034090	Peat Soil	MPTAETWKNWKNAKRLPYQGVVKRDWVPTGRIDFATRLNGNAEDADQPSEFKLLVEERRIVESIAGNENLEIQWRLATLKEAKA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084596

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences