Metagenome / Metatranscriptome Family F084530

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084530
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	70 residues
Representative Sequence	SGRRLESEEAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Number of Associated Samples	101
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.89 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	98.21 %
Associated GOLD sequencing projects	95
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.74

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (91.071 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (10.714 % of family members)
Environment Ontology (ENVO)	Unclassified (26.786 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (37.500 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 47.96% β-sheet: 0.00% Coil/Unstructured: 52.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.74
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.74
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SCOP family	SCOP domain	Representative PDB	TM-score
a.102.1.4: Glycosyltransferase family 36 C-terminal domain	d1h54a1	1h54	0.6771
a.118.8.0: automated matches	d5j90a_	5j90	0.67555
b.82.2.14: Jumonji domain / Histone demethylase core	d3puaa_	3pua	0.65207
a.207.1.1: Formin homology 2 domain (FH2 domain)	d1v9da_	1v9d	0.64371
a.25.1.2: Ribonucleotide reductase-like	d4m1ha1	4m1h	0.63878

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01790	LGT	12.50
PF05157	T2SSE_N	11.61
PF13581	HATPase_c_2	2.68
PF01699	Na_Ca_ex	0.89
PF04964	Flp_Fap	0.89
PF06736	TMEM175	0.89
PF01179	Cu_amine_oxid	0.89
PF01636	APH	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0682	Prolipoprotein diacylglyceryltransferase	Cell wall/membrane/envelope biogenesis [M]	12.50
COG0387	Cation (Ca2+/Na+/K+)/H+ antiporter ChaA	Inorganic ion transport and metabolism [P]	0.89
COG0530	Ca2+/Na+ antiporter	Inorganic ion transport and metabolism [P]	0.89
COG3548	Uncharacterized membrane protein	Function unknown [S]	0.89
COG3733	Cu2+-containing amine oxidase	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89
COG3847	Flp pilus assembly protein, pilin Flp	Extracellular structures [W]	0.89

NCBI Taxonomy

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Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	91.07 %
Unclassified	root	N/A	8.93 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	91.07 %
Unclassified	root	N/A	8.93 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	91.07 %
Unclassified	root	N/A	8.93 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	84.82 %
Unclassified	root	N/A	8.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	82.14 %
Unclassified	root	N/A	8.93 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	70.54 %
Unclassified	root	N/A	8.93 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	5.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales	70.54 %
Unclassified	root	N/A	8.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae	70.54 %
Unclassified	root	N/A	8.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella	70.54 %
Unclassified	root	N/A	8.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Gaiella occulta	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	70.54 %
Unclassified	root	N/A	8.93 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	2.68 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000956\|JGI10216J12902_104393540	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	1063	Open in IMG/M
3300001686\|C688J18823_10843693	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	582	Open in IMG/M
3300004779\|Ga0062380_10211762	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	788	Open in IMG/M
3300005329\|Ga0070683_101217362	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	724	Open in IMG/M
3300005332\|Ga0066388_107028492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	566	Open in IMG/M
3300005334\|Ga0068869_101243591	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	655	Open in IMG/M
3300005347\|Ga0070668_101140012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	705	Open in IMG/M
3300005356\|Ga0070674_101129930	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	693	Open in IMG/M
3300005356\|Ga0070674_101769792	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	560	Open in IMG/M
3300005435\|Ga0070714_101822544	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	594	Open in IMG/M
3300005455\|Ga0070663_101342363	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	632	Open in IMG/M
3300005459\|Ga0068867_101509124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	626	Open in IMG/M
3300005526\|Ga0073909_10666012	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	519	Open in IMG/M
3300005529\|Ga0070741_10778947	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	837	Open in IMG/M
3300005529\|Ga0070741_10841464	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	798	Open in IMG/M
3300005547\|Ga0070693_100587155	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	802	Open in IMG/M
3300005548\|Ga0070665_101177189	All Organisms → cellular organisms → Bacteria	777	Open in IMG/M
3300005559\|Ga0066700_11040877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	537	Open in IMG/M
3300005564\|Ga0070664_100795748	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	884	Open in IMG/M
3300005713\|Ga0066905_101486497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	616	Open in IMG/M
3300005764\|Ga0066903_100487934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2081	Open in IMG/M
3300005764\|Ga0066903_101878868	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300005764\|Ga0066903_106811574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	594	Open in IMG/M
3300005834\|Ga0068851_10873289	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	562	Open in IMG/M
3300006028\|Ga0070717_10247208	Not Available	1575	Open in IMG/M
3300006047\|Ga0075024_100332250	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300006059\|Ga0075017_101116767	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	616	Open in IMG/M
3300006102\|Ga0075015_100975032	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	518	Open in IMG/M
3300006175\|Ga0070712_101080567	All Organisms → cellular organisms → Bacteria	696	Open in IMG/M
3300006576\|Ga0074047_11153628	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300006581\|Ga0074048_11837831	All Organisms → cellular organisms → Bacteria	570	Open in IMG/M
3300006797\|Ga0066659_10400749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1079	Open in IMG/M
3300006881\|Ga0068865_100818154	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	805	Open in IMG/M
3300006881\|Ga0068865_100934847	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	756	Open in IMG/M
3300009038\|Ga0099829_11278125	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	607	Open in IMG/M
3300009088\|Ga0099830_11434717	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	574	Open in IMG/M
3300009090\|Ga0099827_11371615	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	615	Open in IMG/M
3300009091\|Ga0102851_12444484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	597	Open in IMG/M
3300009148\|Ga0105243_11608514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	676	Open in IMG/M
3300009166\|Ga0105100_10915423	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	547	Open in IMG/M
3300009176\|Ga0105242_11699394	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	667	Open in IMG/M
3300009527\|Ga0114942_1318489	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	601	Open in IMG/M
3300010043\|Ga0126380_11504879	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	596	Open in IMG/M
3300010047\|Ga0126382_12015627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	550	Open in IMG/M
3300010371\|Ga0134125_13014028	Not Available	511	Open in IMG/M
3300012901\|Ga0157288_10245569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	598	Open in IMG/M
3300012903\|Ga0157289_10121262	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	773	Open in IMG/M
3300012914\|Ga0157297_10265505	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	629	Open in IMG/M
3300012915\|Ga0157302_10295909	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	626	Open in IMG/M
3300012955\|Ga0164298_10606012	All Organisms → cellular organisms → Bacteria	753	Open in IMG/M
3300012958\|Ga0164299_10500522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	808	Open in IMG/M
3300012960\|Ga0164301_11171273	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	616	Open in IMG/M
3300012960\|Ga0164301_11639103	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	535	Open in IMG/M
3300012961\|Ga0164302_11481374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	558	Open in IMG/M
3300012987\|Ga0164307_10601336	Not Available	848	Open in IMG/M
3300012989\|Ga0164305_11083686	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	687	Open in IMG/M
3300013306\|Ga0163162_12001168	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	664	Open in IMG/M
3300015371\|Ga0132258_12073319	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1430	Open in IMG/M
3300015371\|Ga0132258_13931162	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1010	Open in IMG/M
3300015372\|Ga0132256_100584549	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1231	Open in IMG/M
3300015374\|Ga0132255_102354709	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	813	Open in IMG/M
3300015374\|Ga0132255_103166173	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	702	Open in IMG/M
3300016357\|Ga0182032_11471997	Not Available	591	Open in IMG/M
3300016404\|Ga0182037_11169208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	675	Open in IMG/M
3300017947\|Ga0187785_10178229	Not Available	911	Open in IMG/M
3300018083\|Ga0184628_10374053	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	746	Open in IMG/M
3300018476\|Ga0190274_12872562	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	578	Open in IMG/M
3300018482\|Ga0066669_12197905	Not Available	523	Open in IMG/M
3300022910\|Ga0247768_1096320	All Organisms → cellular organisms → Bacteria → Terrabacteria group	910	Open in IMG/M
3300023097\|Ga0247757_10273181	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	554	Open in IMG/M
3300023275\|Ga0247776_10197730	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	759	Open in IMG/M
3300025909\|Ga0207705_10712600	All Organisms → cellular organisms → Bacteria → Terrabacteria group	780	Open in IMG/M
3300025937\|Ga0207669_10514639	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	960	Open in IMG/M
3300025940\|Ga0207691_11406243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	573	Open in IMG/M
3300025972\|Ga0207668_10761583	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	855	Open in IMG/M
3300025972\|Ga0207668_11322314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	649	Open in IMG/M
3300026023\|Ga0207677_10316701	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1295	Open in IMG/M
3300026035\|Ga0207703_11505638	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	647	Open in IMG/M
3300026075\|Ga0207708_11201794	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	663	Open in IMG/M
3300026089\|Ga0207648_11535337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	626	Open in IMG/M
3300026095\|Ga0207676_12278275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	539	Open in IMG/M
3300027915\|Ga0209069_10540324	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	663	Open in IMG/M
3300028420\|Ga0210366_10397975	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	574	Open in IMG/M
3300028865\|Ga0302291_10050004	Not Available	1352	Open in IMG/M
3300029990\|Ga0311336_10217728	Not Available	1561	Open in IMG/M
3300030000\|Ga0311337_10856116	All Organisms → cellular organisms → Bacteria → Terrabacteria group	790	Open in IMG/M
3300030002\|Ga0311350_11183373	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	681	Open in IMG/M
3300030010\|Ga0302299_10387844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	715	Open in IMG/M
3300030294\|Ga0311349_11918258	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	545	Open in IMG/M
3300031521\|Ga0311364_11189594	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	757	Open in IMG/M
3300031640\|Ga0318555_10524163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	642	Open in IMG/M
3300031726\|Ga0302321_100006934	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	9980	Open in IMG/M
3300031726\|Ga0302321_102942074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	556	Open in IMG/M
3300031748\|Ga0318492_10579623	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	598	Open in IMG/M
3300031765\|Ga0318554_10642503	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	597	Open in IMG/M
3300031832\|Ga0318499_10214887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	749	Open in IMG/M
3300031833\|Ga0310917_11053798	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	544	Open in IMG/M
3300031834\|Ga0315290_11399304	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	572	Open in IMG/M
3300031873\|Ga0315297_11222964	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	615	Open in IMG/M
3300031879\|Ga0306919_10561091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	881	Open in IMG/M
3300031997\|Ga0315278_12136089	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	519	Open in IMG/M
3300032001\|Ga0306922_11167994	Not Available	785	Open in IMG/M
3300032060\|Ga0318505_10558255	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	539	Open in IMG/M
3300032067\|Ga0318524_10658455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	552	Open in IMG/M
3300032143\|Ga0315292_10176745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1734	Open in IMG/M
3300032163\|Ga0315281_10847443	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	939	Open in IMG/M
3300032164\|Ga0315283_11657650	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	649	Open in IMG/M
3300032173\|Ga0315268_10247620	Not Available	1715	Open in IMG/M
3300032174\|Ga0307470_11444113	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	570	Open in IMG/M
3300032256\|Ga0315271_10287114	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Gaiellales → Gaiellaceae → Gaiella → Gaiella occulta	1349	Open in IMG/M
3300032256\|Ga0315271_10441973	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1095	Open in IMG/M
3300033521\|Ga0316616_104043474	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	552	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.00%
Host-Associated	Host-Associated	25.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	58.04%
Plants	Host-Associated → Plants	25.00%
Aquatic	Environmental → Aquatic	16.96%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	47.32%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	12.50%
Freshwater	Environmental → Aquatic → Freshwater	11.61%
Peat	Environmental → Terrestrial → Peat	8.04%
Sediment	Environmental → Aquatic → Sediment	4.46%
Plant Litter	Environmental → Terrestrial → Plant Litter	2.68%
Marine	Environmental → Aquatic → Marine	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	34.82%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.93%
Lake	Environmental → Aquatic → Freshwater → Lake	8.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	8.04%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	2.68%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	20.54%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	10.71%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.93%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.04%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	4.46%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.46%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	3.57%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	10.71%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.04%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	5.36%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	4.46%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	3.57%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	0.89%
Wetland Sediment	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Wetland Sediment	0.89%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	0.89%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Groundwater	0.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001686	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004779	Wetland sediment microbial communities from St. Louis River estuary, USA, under dissolved organic matter induced mercury methylation - T0Bare3Fresh	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005356	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG	Host-Associated	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005526	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1	Environmental	Open in IMG/M
3300005529	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen16_06102014_R1	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005548	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG	Host-Associated	Open in IMG/M
3300005559	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005834	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C1-2	Host-Associated	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006047	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013	Environmental	Open in IMG/M
3300006059	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2012	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006581	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006881	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2	Host-Associated	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009166	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm May2015	Environmental	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009527	Groundwater microbial communities from Cold Creek, Nevada to study Microbial Dark Matter (Phase II) - Lower Cold Creek	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010047	Tropical forest soil microbial communities from Panama - MetaG Plot_30	Environmental	Open in IMG/M
3300010371	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1	Environmental	Open in IMG/M
3300012901	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1	Environmental	Open in IMG/M
3300012903	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S134-311R-1	Environmental	Open in IMG/M
3300012914	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S028-104C-2	Environmental	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300016357	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300017947	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0815_BV2_4_20_MG	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018476	Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 T	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300022910	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L016-104C-6	Environmental	Open in IMG/M
3300023097	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L126-311R-4	Environmental	Open in IMG/M
3300023275	Plant litter microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-L199-509C-5	Environmental	Open in IMG/M
3300025909	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026023	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026035	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026095	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027915	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Straight Creek_MetaG_SC_2013 (SPAdes)	Environmental	Open in IMG/M
3300028420	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Washington, United States ? S.641 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300028865	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N1_4	Environmental	Open in IMG/M
3300029990	I_Fen_N2 coassembly	Environmental	Open in IMG/M
3300030000	I_Fen_N3 coassembly	Environmental	Open in IMG/M
3300030002	II_Fen_N1 coassembly	Environmental	Open in IMG/M
3300030010	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_N3_4	Environmental	Open in IMG/M
3300030294	II_Fen_E3 coassembly	Environmental	Open in IMG/M
3300031521	III_Fen_E2 coassembly	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031726	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Fen_T0_1	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031765	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f22	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031834	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G12_0	Environmental	Open in IMG/M
3300031873	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G15_0	Environmental	Open in IMG/M
3300031879	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032173	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C1_top	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032256	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - C3_top	Environmental	Open in IMG/M
3300033521	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D1_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI10216J12902_1043935403	3300000956	Soil	WRFALDAALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPYVPPANDPFWDLLAWLER*
C688J18823_108436931	3300001686	Soil	SEAAAWRFALTQALVDPTDSTRRRIGKRLRSYVTWAELRARRRTPPFVPPANDPFWDLLAWLER*
Ga0062380_102117621	3300004779	Wetland Sediment	AAWRFALTEALVTPTDSTRRRIGKRSRSYVTWAELRSRRRRPPAIPPAQDPFWELLAWLEH*
Ga0070683_1012173622	3300005329	Corn Rhizosphere	LVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWNLLAWLER*
Ga0066388_1070284922	3300005332	Tropical Forest Soil	AWRFALQEARVEPTDACRRRIGRRLRSYVTWAELRQHRRRPPVLPPRESGFWALLAYLEA
Ga0068869_1012435911	3300005334	Miscanthus Rhizosphere	LHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0070668_1011400121	3300005347	Switchgrass Rhizosphere	EALVDPTDSTRRRIGKRLRSYVIWAERRARRRTPPFVPPANDPFWELLAWLER*
Ga0070674_1011299301	3300005356	Miscanthus Rhizosphere	SGRRLESEAAAWRFALHEALVIPTDTTRRRIGKRLRSYVTWAELRARRRRPPYVPPASDPFWDLLAWLER*
Ga0070674_1017697921	3300005356	Miscanthus Rhizosphere	FVALHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET*
Ga0070714_1018225441	3300005435	Agricultural Soil	RLEKEAAAWLYALREARVQPTDACRRRIGRRLRSYLTWAELRQHRRRPPVIPPPGAPFWNVLAYLES*
Ga0070663_1013423631	3300005455	Corn Rhizosphere	AWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPANDPFWDLLAWLEG
Ga0068867_1015091241	3300005459	Miscanthus Rhizosphere	RLESEEAAWRFALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET*
Ga0073909_106660122	3300005526	Surface Soil	LVGDGRSGRRLETEEAAWRFALQVAIVAPTDSTRRRIGKRLRSYVTWAEQRARRRRPPFVPPVHDPFWALLAWLEA*
Ga0070741_107789471	3300005529	Surface Soil	ALHEIGHLVGPGRSGARLDKEAAAWRFALREARVEPTDACRRRIGKRLRSYVTWAELRQHRRRPPVLPPPESSFWSLLAFLEA*
Ga0070741_108414642	3300005529	Surface Soil	GTRLDREAAAWRFALREARVEPTDACRRRIGKRLRSYVTWAELRQHRRRPPVLPPAESPFWTLLAFLEARDRGPGPR*
Ga0070693_1005871551	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	GAGRSGRRLESEEAAWRFALRETLVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPSGDPFWDLLAWLEA*
Ga0070665_1011771891	3300005548	Switchgrass Rhizosphere	QVSYFVALHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDAFWDLLAWLEA*
Ga0066700_110408772	3300005559	Soil	SGTRLEKEAAAWRWALASSLVEPTDACRRRIGKRLRSYVTWAELRQHRRRPPVLPPRDAAFWPLLAYLEA*
Ga0070664_1007957483	3300005564	Corn Rhizosphere	RSGRRLESEEAAWRFALTEALVSPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWDLLAWLEV*
Ga0066905_1014864971	3300005713	Tropical Forest Soil	LHEIGHLVGPGRSGPRLEKEAAAWRFALGEARVHPTDACRRRIGKRLRSYVTWAERRQHRRRPPVIPQPASEFWRLLAYLEA*
Ga0066903_1004879341	3300005764	Tropical Forest Soil	TRLEKEAAAWRFALQEARVEPTDACRRRIGRRLRSYVAWAELRQHRRRPPALPPRESGFWALLAYLEA*
Ga0066903_1018788682	3300005764	Tropical Forest Soil	SIVAPTDASRRRIGRRLRSYVTWAELRQHRRRPPVLPPRDSSFWPLLAYLEA*
Ga0066903_1068115742	3300005764	Tropical Forest Soil	YFVALHEIGHLVGPGRSGLRLEKEAAAWRWALAASLVEPTDACRRRLGARLRSYVTWAELRRHRKRPPLLPPPESTFWGLLAYLES*
Ga0068851_108732891	3300005834	Corn Rhizosphere	GHLVGQGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPANDPFWDLLAWLEG*
Ga0070717_102472084	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	PGRSGARLEKEAAAWLYALRVARVEPSDACRRRIGKRLRSYLIWAELRQHRRRPPVIPPLDAPFWRVLAYLES*
Ga0075024_1003322502	3300006047	Watersheds	GQVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAEHRARRRRPPFIPPASDPFWDLLAWLEV*
Ga0075017_1011167671	3300006059	Watersheds	SGTRLEKEAAAWRFALRTALVEPTDACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPSSPFWALLGHLEA*
Ga0075015_1009750322	3300006102	Watersheds	PPVRGQVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALGEALVAPTDSTRRRLGARLRSYVTWAELRARRRRAPFLPPAGDPFWELLAWLER*
Ga0070712_1010805671	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	REARVQPTDACRRRIGRRLRSYLTWAEMRQHRRRPPVIPPPGAPFWNVLAYLES*
Ga0074047_111536282	3300006576	Soil	ALHEIGHLVGPGRSGSRLEKEAAAWRFALHEARVEPTDACRRRIGKRLRSYVTWAELRQHRRRPPVLPPLESGFWALLTYLEA*
Ga0074048_118378311	3300006581	Soil	HEIGHLIGPGRSGTRLEKEAAAWRFALDAALVEPTDACRRRIGKRLRSYVTWAEARQYRRRPPVLPAPEAPFWSLLRRLEA*
Ga0066659_104007491	3300006797	Soil	LHEIGHLVGPGRSGARLDKEAAAWRFALREARVQPTDACRRRIGKRLRSYVTWAELRQHRRRPPVVPPPDSPFWSLLAFLEA*
Ga0068865_1008181541	3300006881	Miscanthus Rhizosphere	SYFVALHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET*
Ga0068865_1009348472	3300006881	Miscanthus Rhizosphere	GRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDSFWDLLAWLEA*
Ga0099829_112781252	3300009038	Vadose Zone Soil	RSGTRLEKEAAAWRWALHESVVEPTDACRRRIGRRLRSYVTWAELRQHRRRPPVLPPLGSPFWSLLAYLEA*
Ga0099830_114347171	3300009088	Vadose Zone Soil	WRWALAASLVEPTDACRRRIGKRLRSYLTWAELRQDRRFPPVLPPPGSSFWALLAYLEA*
Ga0099827_113716151	3300009090	Vadose Zone Soil	VTYFVALHELGHLVGPGRSGRRLEKEAAAWRWALAASLVEPTDACRRRIGKRLRSYLTWAELRQDRRFPPVLPPPGSSFWALLAYLEA*
Ga0102851_124444841	3300009091	Freshwater Wetlands	ALREALVTPTDSTRRRIGKRLRSYVTWAEHHARRRRPPFVPPPGDPFWDLLAWLER*
Ga0105243_116085142	3300009148	Miscanthus Rhizosphere	ESEEAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0105100_109154232	3300009166	Freshwater Sediment	LEKEAAAWRFALDQALVEPTDATRRRLGRRLRSYVVWAERRSRRRTPPYVPPPADPFWTLLAWLER*
Ga0105242_116993941	3300009176	Miscanthus Rhizosphere	ALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET*
Ga0114942_13184891	3300009527	Groundwater	RFALSTALVTPTDATRRRMGKRLRSYVIWAERRAGRRQPPHIPPAEDPFWALLTWLER*
Ga0126380_115048792	3300010043	Tropical Forest Soil	VRNRPGRSGTRLEKEAAAWRFALREARVAPTDASRRRIGRRLRSYVTWAELRQHRRRPPVLPPRESPFWALLAYLEA*
Ga0126382_120156272	3300010047	Tropical Forest Soil	EAAAWRFALRESRVEPSDACRRRIGKRLRSYVTWAELRQYRRRPPVLPPRESPFWALLAYLEA*
Ga0134125_130140281	3300010371	Terrestrial Soil	LEKEAAAWRYALAHALVAPTDATRRRIGLRLRSYVTWAQARSSRRIPPFVPPREDPFWQLLDWLEA*
Ga0157288_102455691	3300012901	Soil	GQGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYMTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0157289_101212621	3300012903	Soil	SGRRLESEEAAWRFALTEALVSPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWDLLAWLEV*
Ga0157297_102655051	3300012914	Soil	EAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0157302_102959091	3300012915	Soil	AAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWNLLAWLER*
Ga0164298_106060122	3300012955	Soil	EAAAWRFALHEARVEPTDACRRRIGRRLRSYVTWAELRQHRRRPPVLPPRESGFWALLAYLEA*
Ga0164299_105005222	3300012958	Soil	HEIGHLVGQGRSGRRLESEEAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0164301_111712731	3300012960	Soil	VAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFMPPANDPFWDLLAWLEV*
Ga0164301_116391031	3300012960	Soil	LVGDGRSRRRLETEEAAWRFALQVAIVAPTDSTRRRIGKRLRSYVTWAEQRARRRRPPFVPPVHDPFWALLAWLEA*
Ga0164302_114813742	3300012961	Soil	HEIGHLIGPGRSGTRLEKEAAAWRFALREARVEPTDACRRRIGKRLRSYVTWAERRQHRRRPPVLPPGESGFWALLAYLEA*
Ga0164307_106013361	3300012987	Soil	ARVEPTDACRRRIGKRLRSYVTWAERRQHRRRPPVLPPGESGFWALLAYLEA*
Ga0164305_110836861	3300012989	Soil	SGRRLESEEAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0163162_120011682	3300013306	Switchgrass Rhizosphere	EIGHLVGQGRSGRRLESEEAAWRFALAETLVAPTDTTRRRIGARLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0132258_120733193	3300015371	Arabidopsis Rhizosphere	LHEIGHLVGHGRSGRRLETEEAAWRFALREALVTPTDSTRRRIGKRLRSYVTWAQGRARRRRPPFVPPATDPFWDLLAWLEE*
Ga0132258_139311621	3300015371	Arabidopsis Rhizosphere	LEIRVPPVRGQVSYFVALHESGHLVGAGRSGRRLESEEAAWRFALRETLVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPAGDPFWDLLAWLEA*
Ga0132256_1005845491	3300015372	Arabidopsis Rhizosphere	VRGQVSYFVALHEIGHLVGQGRSGRRLESEEAAWRFALSEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET*
Ga0132255_1023547091	3300015374	Arabidopsis Rhizosphere	SEEAAWRFALRETLVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPTGDAIWDLLAWLEA*
Ga0132255_1031661731	3300015374	Arabidopsis Rhizosphere	WRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA*
Ga0182032_114719972	3300016357	Soil	RFALDTTLVEPTDACRRRIGKRLRSYVTWAEARQHRRRPPVLPAPEAPFWSLLRRLEA
Ga0182037_111692082	3300016404	Soil	EKEAAAWRFALQAALVEPTVACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPGSPFWALLSDLEA
Ga0187785_101782292	3300017947	Tropical Peatland	GPGRSGRRLEKEAAAWIWALANSRVTPTDATRRRLGARLRSYVTWAERRRHGKRPPVLPSPESDFWTLLRYLEA
Ga0184628_103740532	3300018083	Groundwater Sediment	QVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALAEALVTPTDSTRRRIGKRLRSYVTWAELRAARRRPPFVPPANDAFWDLLAWLER
Ga0190274_128725622	3300018476	Soil	EAAAWRFALHEALVIPTDSTRRRIGKRLRSYVIWAEHRARRRRPPYVPPASDPFWDLLAWLEG
Ga0066669_121979052	3300018482	Grasslands Soil	ALANSVVHPTEATRRRIGARLRSYVTWAELRQRRRRPPVLPHAASDFWTLLAYLEG
Ga0247768_10963201	3300022910	Plant Litter	TEALVSPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWDLLAWLEV
Ga0247757_102731812	3300023097	Plant Litter	GRSGRRLESEEAAWRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Ga0247776_101977303	3300023275	Plant Litter	RFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Ga0207705_107126003	3300025909	Corn Rhizosphere	LESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWNLLAWLER
Ga0207669_105146393	3300025937	Miscanthus Rhizosphere	CFVALHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET
Ga0207691_114062431	3300025940	Miscanthus Rhizosphere	LESEEAAWRFALTEALVSPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWDLLAWLEV
Ga0207668_107615833	3300025972	Switchgrass Rhizosphere	EALVDPTDSTRRRIGKRLRSYVIWAERRARRRTPPFVPPANDPFWELLAWLER
Ga0207668_113223141	3300025972	Switchgrass Rhizosphere	WRFALTEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Ga0207677_103167011	3300026023	Miscanthus Rhizosphere	EIGHLVGEGRSGRRLESEAAAWRFALAEALVAPTDTTRRRMGKRLRSYVTWAELRARRRRPPFIPPANDPFWNLLAWLEH
Ga0207703_115056381	3300026035	Switchgrass Rhizosphere	SYFVALHEIGHLVGQGRSGRRLESEEAAWRFALAETLVAPTDTTRRRIGARLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Ga0207708_112017941	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	SYFVALHEIGHLVGQGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGTRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLEA
Ga0207648_115353372	3300026089	Miscanthus Rhizosphere	RLESEEAAWRFALAEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET
Ga0207676_122782751	3300026095	Switchgrass Rhizosphere	VALHEIGHLVGEGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDPFWNLLAWLER
Ga0209069_105403241	3300027915	Watersheds	GQVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAEHRARRRRPPFIPPASDPFWDLLAWLEV
Ga0210366_103979752	3300028420	Estuarine	VGPGRSGRRLECEAAAWRFALETAVVSPTDATRRRIGKRLRSYVTWAEGRATRRRPPHIPPANDPFWRFLAWLEH
Ga0302291_100500041	3300028865	Fen	EAAWRFALGASLVAPTDSTRRRIGARLRSYVTWAELRSRRRRPPYVPPVGDPFWELLAWLER
Ga0311336_102177283	3300029990	Fen	LVAPTDSTRRRIGARLRSYVTWAELRSRRRRPPYVPPVGDPFWELLAWLER
Ga0311337_108561161	3300030000	Fen	AWRFALGESLVAPTDATRRRIGARLRSYVTWAELRSRRRRPPYMPPGGDPFWELLAWLER
Ga0311350_111833731	3300030002	Fen	RGQVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALGASLVAPTDSTRRRIGARLRSYVTWAELRSRRRRPPYVPPVGDPFWELLAWLER
Ga0302299_103878441	3300030010	Fen	RLESEEAAWRFALGESLVAPTDATRRRIGARLRSYVTWAELRSRRRRPPYVPPVGDPFWELLAWLER
Ga0311349_119182581	3300030294	Fen	RFALGASLVAPTDSTRRRIGARLRSYVTWAELRSRRRRPPYVPPVGDPFWELLAWLER
Ga0311364_111895941	3300031521	Fen	RLESEEAAWRFALAEALVVPTDSTRRRIGKRLRSYVAWAELRARRRRPPFVPPANDPFWDLLAWLER
Ga0318555_105241631	3300031640	Soil	AWRFALQAALVEPTVACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPGSPFWALLSDLEA
Ga0302321_1000069346	3300031726	Fen	VSYFVALHEIGHLVGAGRGGRRLESEEAAWRFALAEALVVPTDSTRRRIGKRLRSYVAWAELRARRRRPPFVPPANDPFWDLLAWLER
Ga0302321_1029420742	3300031726	Fen	FALSEALVRPTDSTRRRIGKRLRSYVTWAELRARRRRPPFVPPASDPFWDLLAWLER
Ga0318492_105796231	3300031748	Soil	IGHLVGPGRSGPRLEKEAAAWRWALAAALVEPTDACRRRLGVRLRSYVTWAERCRQRKRPPVLPAPESSFWGLLTYLES
Ga0318554_106425031	3300031765	Soil	KEAAAWRWALAASLVEPTDACRRRLGARLRSYVTWAELRRHRKRPPLLPPPESSFWGLLAYLES
Ga0318499_102148872	3300031832	Soil	GQVTHFVALHEIGHLIGPGRSGTRLEKEAAAWRFALQAALVEPTVACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPGSPFWALLSDLEA
Ga0310917_110537981	3300031833	Soil	WRFALDTTLVEPTDACRRRIGKRLRSYVTWAEARQHRRRPPVLPAPEAPFWSLLRRLEA
Ga0315290_113993041	3300031834	Sediment	EIGHLVGAGRSGRRLESEEAAWRFALSEALVAPTDSTRRRIGKRLRSYVSWAELRARRRQPPFVPPANDSFWHLLAWLEH
Ga0315297_112229641	3300031873	Sediment	VGAGRSGRRLESEEAAWRFALSAALVAPTDATRRRIGKRLRSYVTWAELRARRRRPPFVPPANDPFWQLLAWLEH
Ga0306919_105610913	3300031879	Soil	EIGHLIGPGRSGTRLEKEAAAWRFALQAALVEPTVACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPGSPFWALLSDLEA
Ga0315278_121360891	3300031997	Sediment	EPTDTTRRRIGRRLRSYVRWAEMRASRRLPPQLPPAADPFWQLLAWLEA
Ga0306922_111679942	3300032001	Soil	TTLVEPTDACRRRIGKRLRSYVTWAEARQHRRRPPVLPAPEAPFWSLLRRLEA
Ga0318505_105582551	3300032060	Soil	AALVEPTVACRRRIGRRLRSYVTWAEARQHRRRPPVLPPPGSPFWALLSDLEA
Ga0318524_106584551	3300032067	Soil	AWRFALDTTLVEPTDACRRRIGKRLRSYVTWAEARQHRRRPPVLPAPEAPFWSLLRRLEA
Ga0315292_101767454	3300032143	Sediment	QVSYFVALHEIGHLVGAGRSGRRLESEEAAWRFALTEALVTPTDSTRRRIGKRLRSYVTWAELRSRRRRPPSIPPAQDPFWELLAWLEH
Ga0315281_108474433	3300032163	Sediment	RLEQEAAAWHFALQVALVEPTDTTRRRIGRRLRSYVRWAELRASRRVPPYLPPAADPFWQLLAWLEA
Ga0315283_116576502	3300032164	Sediment	AAWHFALRVALVEPTDTTRRRIGRRLRSYVRWAEMRASRRVPPYLPPAADPFWQLLAWLE
Ga0315268_102476204	3300032173	Sediment	SEEAAWRFALTEALVAPTDSTRRRIGKRLRSYVTWAELRARRRRPPAIPPANDPFWDLLAWLEH
Ga0307470_114441131	3300032174	Hardwood Forest Soil	EEAAWRFALAEALVAPTDTTRRRIGKRLRSYVTWAELRARRRRPPFIPPANDAFWDLLAWLET
Ga0315271_102871143	3300032256	Sediment	GQVSYFIALHEIGHLVGAGRSGRRLESEEAAWRFALSAALVAPTDATRRRIGKRLRSYVTWAELRARRRQPPFVPPANDPFWQLLAWLEH
Ga0315271_104419731	3300032256	Sediment	YFVALHEIGHLVGAGRSGRRLESEEAAWRFALTEALVTPTDSTRRRIGKRLRSYVTWAELRARRRRPPHIPPANDGFWDLLAWLER
Ga0316616_1040434742	3300033521	Soil	EALVEPTDATRRRIGRRLRSYVTWAEHRGRRRTPPYVPPPADPFWSLLAWLER

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084530

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Structural matches with SCOPe domains

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences