Metagenome / Metatranscriptome Family F084523

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084523
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	117 residues
Representative Sequence	PIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Number of Associated Samples	95
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	8.11 %
% of genes near scaffold ends (potentially truncated)	86.61 %
% of genes from short scaffolds (< 2000 bps)	97.32 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (99.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (33.929 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (57.143 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.97% β-sheet: 21.55% Coil/Unstructured: 34.48%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01478	Peptidase_A24	42.86
PF00072	Response_reg	12.50
PF13400	Tad	1.79
PF06958	Pyocin_S	0.89
PF00496	SBP_bac_5	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG5529	Phage-encoded DNA-binding protein ECs1768, contains HTH and DnaT DNA-binding domains	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	80.36 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	80.36 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	79.46 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	79.46 %
Bacteroidia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.46 %
Bacteroidales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.46 %
Prevotellaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.46 %
Alloprevotella	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	79.46 %
Alloprevotella sp. oral taxon 473	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella → Alloprevotella sp. oral taxon 473	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %
Unclassified	root	N/A	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2044078003\|MGB_F548DK202GPL1T	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	504	Open in IMG/M
2170459010\|GIO7OMY02GXDDG	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
2170459017\|G14TP7Y01DRM7K	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
2170459019\|G14TP7Y01C3GY5	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	546	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_105670305	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	943	Open in IMG/M
3300000956\|JGI10216J12902_103119696	All Organisms → cellular organisms → Bacteria	1375	Open in IMG/M
3300002568\|C688J35102_119307543	All Organisms → cellular organisms → Bacteria → Proteobacteria	671	Open in IMG/M
3300002911\|JGI25390J43892_10149019	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	545	Open in IMG/M
3300005166\|Ga0066674_10246881	All Organisms → cellular organisms → Bacteria	847	Open in IMG/M
3300005166\|Ga0066674_10487900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	557	Open in IMG/M
3300005171\|Ga0066677_10257041	All Organisms → cellular organisms → Bacteria	993	Open in IMG/M
3300005172\|Ga0066683_10257139	All Organisms → cellular organisms → Bacteria	1083	Open in IMG/M
3300005175\|Ga0066673_10617380	All Organisms → cellular organisms → Bacteria	630	Open in IMG/M
3300005178\|Ga0066688_10363230	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	938	Open in IMG/M
3300005179\|Ga0066684_10979706	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005332\|Ga0066388_107745975	All Organisms → cellular organisms → Bacteria → Proteobacteria	538	Open in IMG/M
3300005439\|Ga0070711_100233919	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1434	Open in IMG/M
3300005439\|Ga0070711_101094341	All Organisms → cellular organisms → Bacteria	686	Open in IMG/M
3300005444\|Ga0070694_101864746	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300005445\|Ga0070708_100152337	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2151	Open in IMG/M
3300005447\|Ga0066689_10577499	All Organisms → cellular organisms → Bacteria	710	Open in IMG/M
3300005450\|Ga0066682_10925693	All Organisms → cellular organisms → Bacteria	518	Open in IMG/M
3300005459\|Ga0068867_102306721	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	511	Open in IMG/M
3300005536\|Ga0070697_100324078	All Organisms → cellular organisms → Bacteria	1327	Open in IMG/M
3300005536\|Ga0070697_101908058	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300005540\|Ga0066697_10448271	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	743	Open in IMG/M
3300005553\|Ga0066695_10534401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	715	Open in IMG/M
3300005556\|Ga0066707_10353844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	960	Open in IMG/M
3300005558\|Ga0066698_10951837	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300005578\|Ga0068854_101361885	All Organisms → cellular organisms → Bacteria	640	Open in IMG/M
3300005598\|Ga0066706_10799231	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300005598\|Ga0066706_10956237	All Organisms → cellular organisms → Bacteria	663	Open in IMG/M
3300005615\|Ga0070702_101889380	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Bacteroidia → Bacteroidales → Prevotellaceae → Alloprevotella → Alloprevotella sp. oral taxon 473	500	Open in IMG/M
3300006032\|Ga0066696_10479124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	817	Open in IMG/M
3300006032\|Ga0066696_10641249	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	686	Open in IMG/M
3300006034\|Ga0066656_10802445	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	603	Open in IMG/M
3300006175\|Ga0070712_101642717	All Organisms → cellular organisms → Bacteria	562	Open in IMG/M
3300006791\|Ga0066653_10445063	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	661	Open in IMG/M
3300006796\|Ga0066665_10870866	All Organisms → cellular organisms → Bacteria	701	Open in IMG/M
3300006796\|Ga0066665_11504279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	525	Open in IMG/M
3300006797\|Ga0066659_11567259	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	553	Open in IMG/M
3300006804\|Ga0079221_11566377	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	532	Open in IMG/M
3300006914\|Ga0075436_100366114	All Organisms → cellular organisms → Bacteria	1041	Open in IMG/M
3300009137\|Ga0066709_103016609	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	618	Open in IMG/M
3300009162\|Ga0075423_10862893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	959	Open in IMG/M
3300009174\|Ga0105241_11181196	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300009176\|Ga0105242_12649728	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300009553\|Ga0105249_11542739	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	737	Open in IMG/M
3300010044\|Ga0126310_11488402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	555	Open in IMG/M
3300010329\|Ga0134111_10560680	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	508	Open in IMG/M
3300010333\|Ga0134080_10587678	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300010359\|Ga0126376_10449579	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1177	Open in IMG/M
3300010400\|Ga0134122_10566535	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1042	Open in IMG/M
3300012198\|Ga0137364_10612484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	821	Open in IMG/M
3300012198\|Ga0137364_10721336	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	753	Open in IMG/M
3300012201\|Ga0137365_11203404	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	541	Open in IMG/M
3300012206\|Ga0137380_11155885	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	658	Open in IMG/M
3300012211\|Ga0137377_11308448	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	655	Open in IMG/M
3300012285\|Ga0137370_10687966	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	635	Open in IMG/M
3300012354\|Ga0137366_10513889	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	864	Open in IMG/M
3300012356\|Ga0137371_11216018	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	562	Open in IMG/M
3300012356\|Ga0137371_11253508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300012357\|Ga0137384_10884340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	720	Open in IMG/M
3300012357\|Ga0137384_11066023	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	649	Open in IMG/M
3300012907\|Ga0157283_10281318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	568	Open in IMG/M
3300012951\|Ga0164300_10617624	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300012977\|Ga0134087_10689456	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300014157\|Ga0134078_10533105	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	551	Open in IMG/M
3300014497\|Ga0182008_10540221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	646	Open in IMG/M
3300014968\|Ga0157379_11244597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	717	Open in IMG/M
3300015356\|Ga0134073_10100110	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300017656\|Ga0134112_10444188	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	542	Open in IMG/M
3300017657\|Ga0134074_1147074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	823	Open in IMG/M
3300018433\|Ga0066667_12032139	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	529	Open in IMG/M
3300018482\|Ga0066669_10509143	All Organisms → cellular organisms → Bacteria	1043	Open in IMG/M
3300018482\|Ga0066669_12027413	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	540	Open in IMG/M
3300019878\|Ga0193715_1083287	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	662	Open in IMG/M
3300019887\|Ga0193729_1181312	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	735	Open in IMG/M
3300019890\|Ga0193728_1124637	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1163	Open in IMG/M
3300019890\|Ga0193728_1361411	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300021078\|Ga0210381_10149627	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	791	Open in IMG/M
3300021344\|Ga0193719_10244074	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	760	Open in IMG/M
3300025898\|Ga0207692_10112675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1511	Open in IMG/M
3300025911\|Ga0207654_11294963	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	531	Open in IMG/M
3300025922\|Ga0207646_11265890	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	645	Open in IMG/M
3300025928\|Ga0207700_10846946	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	818	Open in IMG/M
3300026300\|Ga0209027_1086556	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1145	Open in IMG/M
3300026528\|Ga0209378_1131565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1050	Open in IMG/M
3300028719\|Ga0307301_10114327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	860	Open in IMG/M
3300028768\|Ga0307280_10160446	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	780	Open in IMG/M
3300028796\|Ga0307287_10075379	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1261	Open in IMG/M
3300028799\|Ga0307284_10314893	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	630	Open in IMG/M
3300028819\|Ga0307296_10173534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1168	Open in IMG/M
3300028819\|Ga0307296_10427208	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	724	Open in IMG/M
3300028819\|Ga0307296_10707565	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	550	Open in IMG/M
3300028824\|Ga0307310_10004888	All Organisms → cellular organisms → Bacteria	5071	Open in IMG/M
3300028828\|Ga0307312_10773222	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	636	Open in IMG/M
3300028828\|Ga0307312_10945024	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	571	Open in IMG/M
3300028880\|Ga0307300_10254533	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	583	Open in IMG/M
3300028881\|Ga0307277_10090221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1291	Open in IMG/M
3300028881\|Ga0307277_10203480	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	868	Open in IMG/M
3300028881\|Ga0307277_10551488	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	517	Open in IMG/M
3300031421\|Ga0308194_10136320	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	744	Open in IMG/M
3300031938\|Ga0308175_101378844	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300032013\|Ga0310906_10554878	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	785	Open in IMG/M
3300032075\|Ga0310890_11239346	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	608	Open in IMG/M
3300032180\|Ga0307471_103622079	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	547	Open in IMG/M
3300032205\|Ga0307472_102044754	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	575	Open in IMG/M
3300033412\|Ga0310810_11258402	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	590	Open in IMG/M
3300033475\|Ga0310811_11338673	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	563	Open in IMG/M
3300034820\|Ga0373959_0151046	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	587	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	88.39%
Host-Associated	Host-Associated	9.82%
Engineered	Engineered	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	87.50%
Plants	Host-Associated → Plants	9.82%
Solid Waste	Engineered → Solid Waste	1.79%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	87.50%
Rhizosphere	Host-Associated → Plants → Rhizosphere	8.04%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Grass	Engineered → Solid Waste → Grass	1.79%
Freshwater	Environmental → Aquatic → Freshwater	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	74.11%
Loam	Environmental → Terrestrial → Soil → Loam	13.39%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	7.14%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Composting	Engineered → Solid Waste → Grass → Composting	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	40.18%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	27.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	7.14%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Unclassified	Engineered → Solid Waste → Grass → Composting → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	21.43%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	20.54%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	9.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	9.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	6.25%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	2.68%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Switchgrass, Maize And Mischanthus Litter	Engineered → Solid Waste → Grass → Composting → Unclassified → Switchgrass, Maize And Mischanthus Litter	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	0.89%
Switchgrass, Maize And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Switchgrass, Maize And Miscanthus Rhizosphere	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grass Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Rhizosphere Soil	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2044078003	Miscanthus field bulk soil microbial communities from University of Illinois Energy Farm, Urbana, IL	Environmental	Open in IMG/M
2170459010	Grass soil microbial communities from Rothamsted Park, UK - December 2009 direct MP BIO1O1 lysis 0-9cm (no DNA from 10 to 21cm!!!)	Environmental	Open in IMG/M
2170459017	Litter degradation ZMR4	Engineered	Open in IMG/M
2170459019	Litter degradation MG4	Engineered	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300002568	Grasslands soil microbial communities from Hopland, California, USA - 2	Environmental	Open in IMG/M
3300002911	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm	Environmental	Open in IMG/M
3300005166	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005172	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_132	Environmental	Open in IMG/M
3300005175	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005439	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005445	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-3 metaG	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005536	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-1 metaG	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005553	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_144	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010359	Tropical forest soil microbial communities from Panama - MetaG Plot_15	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012907	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S044-104R-1	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300014497	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-129_1 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019878	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2m2	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300019890	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c1	Environmental	Open in IMG/M
3300021078	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_5_coex redo	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300025898	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025928	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026300	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026528	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156 (SPAdes)	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028768	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028799	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_123	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028824	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_197	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028880	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_181	Environmental	Open in IMG/M
3300028881	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_116	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032013	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M
3300033475	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YC	Environmental	Open in IMG/M
3300034820	Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
MGB_120250	2044078003	Switchgrass, Maize And Miscanthus Rhizosphere	VLLGTRDEQFLRLAEFLLTRNGFAVESTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPSTGLPIMEKWEALE
F62_10315430	2170459010	Grass Soil	LRRARRLARRRHGRSECSWLRATKSFLRLAQFLLTRNGFAVESRKKIVNAVDLVGRHRLDVVVLDASDSMSETARTVAAIEALHPQVGVLLVCDDERPRPTTGLEIVEKWEALETLTDDIRRSFSSATT
4ZMR_03073100	2170459017	Switchgrass, Maize And Mischanthus Litter	GRPLAAPQRMLTTHEAASDSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN
4MG_03459260	2170459019	Switchgrass, Maize And Mischanthus Litter	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN
INPhiseqgaiiFebDRAFT_1056703052	3300000364	Soil	PTRPIRVLLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS*
JGI10216J12902_1031196961	3300000956	Soil	EGETSSDGAAARPIRVLLGTRDDRFLRLARFLLTRNDFVVESTKRLPSAVEYVERHGTDVVVLDASDSLSEAAKTVAAIEALNPEVRVLLVSDADRPRPTAGLNVMEKWQALESLPDEIKLSHAGSRAWN*
C688J35102_1193075432	3300002568	Soil	ATEGATASPTRPIRVLLGTRDDQFLRLAEFLLTRNGFAVGATKKIGDAVDLVWRQRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMDKWEALETLSDDIRRSYASATN*
JGI25390J43892_101490191	3300002911	Grasslands Soil	GVNGRPQADSHSFATREAPNGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066674_102468812	3300005166	Soil	TRNGFAVGATKKIGDAVDLVWRQRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066674_104879002	3300005166	Soil	ENDGGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVELVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVLEKWHALETLADEIKLSHAGSRAWS*
Ga0066677_102570411	3300005171	Soil	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066683_102571392	3300005172	Soil	PATLANDGGAPTRPIRVLLGSRDDRFLRLARFLLTWSDFAVESTKRVPSAVVLVEWHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVLEKWHALETLADEIKLSHAGSRAWS*
Ga0066673_106173802	3300005175	Soil	TRNGFAVEATRKVVNAVDLIGRERLDVVVLDASESISETARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYSSATD*
Ga0066688_103632301	3300005178	Soil	PQAPPPDTRASDGDAPTRPIRVLLGSRDDRFLRLARFLLTRSDFAVESTKRVPSAVDLVERHGSDFVILDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS*
Ga0066684_109797062	3300005179	Soil	NGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066388_1077459751	3300005332	Tropical Forest Soil	FLLTRNGFTVETTKKMSQAVDIVGRLWMDVVVLDASESLSEAARTVAAIDALHPQVSVLLVSDDERPKPNAALQVADKWEAMETLTEDIRRAHTSATT*
Ga0070711_1002339191	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	RVAASPTRPIRVLLGTRDEQFLRLAEFLLERNGFAVETTKKIPNAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN*
Ga0070711_1010943411	3300005439	Corn, Switchgrass And Miscanthus Rhizosphere	AAGAQQASVASPTRPIRVLLGTRDEEFLRLAQFLLTRNGFAVESTKKLVDAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVVIVCDDERPRPTTGLEIVEKWEALETLADDIRLSYASATN*
Ga0070694_1018647461	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	TRDEQFLRLAEFLLERNGFAVETTKKIPNAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN*
Ga0070708_1001523376	3300005445	Corn, Switchgrass And Miscanthus Rhizosphere	FLRLAEFLLTRNGFAAESTKKIVNAVDLVGRERLDVVVLDASESLSEAARTVAAIEALHPQVGVLIVCDDERPKPNTGLEIVEKWEALETLTDDIQRSFARATS*
Ga0066689_105774991	3300005447	Soil	NGFAVETTKKIAGAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRHSYASATD*
Ga0066682_109256931	3300005450	Soil	FAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0068867_1023067212	3300005459	Miscanthus Rhizosphere	RDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0070697_1003240781	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	RNGFAVESTKKIVDSVDLVWRKRLDVVVLDASESLSEAARTAAAIEALHPQVGVRIVCDDERPRPTTGLEIVEKWEALETLADDIRRSYTRATS*
Ga0070697_1019080582	3300005536	Corn, Switchgrass And Miscanthus Rhizosphere	LAEFLLTRNGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSVAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN*
Ga0066697_104482712	3300005540	Soil	PAPAAGASSRAPSPTRPIRVLLASRDEEFLRLAQFLLTRNGFAVESTKKIVNAVELIGRERLDVVVLDASDSMSETARTTAAIEALHPQVGVLLVCDDERPRPATGLAMMEKWEALETLADDIRGSYASATT*
Ga0066695_105344012	3300005553	Soil	RPLAASRPPTREAAPDSTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIAAAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066707_103538443	3300005556	Soil	ETTKKIPNAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATALPIMEKWEALETLSDDIRRSYASATN*
Ga0066698_109518371	3300005558	Soil	EQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN*
Ga0068854_1013618851	3300005578	Corn Rhizosphere	GGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS*
Ga0066706_107992312	3300005598	Soil	DEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066706_109562372	3300005598	Soil	FLLTRNGFAVESTKKIVNAVELIGRERLDVVVLDASDSMSETARTAAAIEALHPQVGVLLVCDDERPRPATGLDMMEKWEALETLADDIRGSYASATT*
Ga0070702_1018893801	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	ANGSPTRPIRVLLCTRDEQFLRLAEFLLTRNGFAVGTTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066696_104791241	3300006032	Soil	TTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0066696_106412491	3300006032	Soil	ATRDEDFLRLAQFLLTRNGFAVESTRKVVNAVDLIGRERLDIVVLDASESISEAARTVAAIEALHPQVGVLLVSDDERPKPTSGLQIAEKWEAMETLTDDIRRSYAKATS*
Ga0066656_108024451	3300006034	Soil	RQAANGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0070712_1016427171	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	LAQFLLTRNGFAVESTKKLVDAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVVIVCDDERPRPTTGLEIVEKWEALETLADDIRLSYASATN*
Ga0066653_104450631	3300006791	Soil	NGFAVESTKKIVDSVDLVWKKRLDVVVLDASESLSEAARTAAAIEALHPQVGVRIVCDDERPRPTTGLELVEKWEALETLPDDIRRSYASATN*
Ga0066665_108708662	3300006796	Soil	PIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWHQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYSSATN*
Ga0066665_115042791	3300006796	Soil	SDGDAPTRPIRVLLGSRDDRFLRLARFLLTRSDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHTGSRAWS*
Ga0066659_115672591	3300006797	Soil	EQFLRLAEFLLTRNGFAVETTKKTASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0079221_115663771	3300006804	Agricultural Soil	SNDGDGASPERPIRVLLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIDALNPRVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0075436_1003661141	3300006914	Populus Rhizosphere	LERPIRVLLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0066709_1002478361	3300009137	Grasslands Soil	KKIVNAVELIGRERLDVVVLDASDSMSETARTAAAIEALHPQVGVLLVCDDERPRPATGLDMMEKWEALETLADDIRGSYASATT*
Ga0066709_1030166091	3300009137	Grasslands Soil	SPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0075423_108628932	3300009162	Populus Rhizosphere	ERPIRVLLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS
Ga0105241_111811962	3300009174	Corn Rhizosphere	LRLSRFLLTRDDFSVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0105242_126497282	3300009176	Miscanthus Rhizosphere	AEFLLTRNGFAVETTKKIATAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN*
Ga0105249_115427391	3300009553	Switchgrass Rhizosphere	EAPPPATRDDDGGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS*
Ga0126310_114884021	3300010044	Serpentine Soil	SRTFRTGTEDATASPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVGATKKIGDAVDLVWRQRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMDKWEALETLSDDIRRSYASATN*
Ga0134111_105606801	3300010329	Grasslands Soil	QADSRPFATRQAANGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0134080_105876781	3300010333	Grasslands Soil	VETTKKIAAAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMDKWEALETLSDDIRRSYASATN*
Ga0126376_104495791	3300010359	Tropical Forest Soil	DRPIRVLLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVGAIEALNPRVRVLLVCDAERPRPTTGLNVMEKWQALETLTDEIKLSQTGSRAWS
Ga0134122_105665352	3300010400	Terrestrial Soil	LLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0137364_106124841	3300012198	Vadose Zone Soil	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATA*
Ga0137364_107213361	3300012198	Vadose Zone Soil	RNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYSSATD*
Ga0137365_112034041	3300012201	Vadose Zone Soil	IRVLLGTRDEEFLRLAQFLLTRNGFAVESTKKIVNAVDLVGRQRLDVVVLDASDSMSETARTVAAIEALHPQVGVLLVCDDERPRPTTGLEIVEKWEALETLTDDIRRSFSSATT*
Ga0137380_111558851	3300012206	Vadose Zone Soil	VLLGTRDDQFVRLTRFLLVRNDFVVESTRRLDGIVDLVEQQRTDVLVLDASESLSEAARIVAAMDALHPHVRVLLVSDGGRPRSTTGLKVADKWEALETLPDEIRLSPSGSRTWT*
Ga0137377_113084481	3300012211	Vadose Zone Soil	LALETAAASPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKVANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYTSATN*
Ga0137370_106879662	3300012285	Vadose Zone Soil	MLTTHEAAADSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN*
Ga0137366_105138891	3300012354	Vadose Zone Soil	LGTRDDQFLRLAEFLLTRNGFAVETTREIANAVDLVWRQRLDVVVLDATDSLSEAARTAAAIEALHPQVAVLIVCDDERPKPSTGLPIREKWEALETLSDDIRRSYSGATN*
Ga0137371_112160181	3300012356	Vadose Zone Soil	VLLGTRDEEFLRLAQFLLTRNGFAVESTKKIVNAVDLVWRQRLDVVVIDASESLSEAARTAAAIEALHPQVGVMIVCDDERPRPSTGLEITEKWEALETLADDIRRSYASAAT*
Ga0137371_112535082	3300012356	Vadose Zone Soil	TDSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIAAAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN*
Ga0137384_108843402	3300012357	Vadose Zone Soil	LLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD*
Ga0137384_110660231	3300012357	Vadose Zone Soil	LPLALETAAASPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN*
Ga0157283_102813182	3300012907	Soil	LRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS*
Ga0164300_106176241	3300012951	Soil	ATPTAPVLAAGAQQASVASPTRPIRVLLGTRDEEFLRLAQFLLTRNGFAVESTKKLVDAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVVIVCDDERPRPTTGLEIVEKWEALETLADDIRLSYASATN*
Ga0134087_106894561	3300012977	Grasslands Soil	GSQSSFATRQAANGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATA*
Ga0134078_105331051	3300014157	Grasslands Soil	VLLASRDEEFLRLAQFLLTRNGFAVESTKKIVNAVELIGRERLDVVVLDASDSMSETARTAAAIEALHPQVGVLLVCDDERPRPATGLDMMEKWEALETLADDIRGSYASATT*
Ga0182008_105402212	3300014497	Rhizosphere	RVLLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS*
Ga0157379_112445972	3300014968	Switchgrass Rhizosphere	LRLAEFLLTRNGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN*
Ga0134073_101001102	3300015356	Grasslands Soil	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLAVMEKWEALETLSDDIRRSYASATN*
Ga0134112_104441881	3300017656	Grasslands Soil	RDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0134074_11470741	3300017657	Grasslands Soil	RPATKEAANGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0066667_120321391	3300018433	Grasslands Soil	PIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0066669_105091433	3300018482	Grasslands Soil	PAGAGQAYIPASPVRPIRVLLATRDDDFMRLAHFLLTRNGFTVETTKKVSQAVDLVGRYWLDVVVLDASESLSEAARTNAAIEALHPQVSVLLVSDDERPKPNAALQVADKWEAMETLTDDIRRAHTSATK
Ga0066669_120274131	3300018482	Grasslands Soil	GFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0193715_10832871	3300019878	Soil	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVLIVCDDERPKPTTGLPIVEKWEALETLSDDIRRLYASATN
Ga0193729_11813122	3300019887	Soil	GVAAGAQQAAIASPTRPIRVLLGTRDEEFLRLAQFLLTRNGFAVESTKKLVDAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVMIVCDDERPRPTTGLEIVEKWEALETLADDIRLSYVSATN
Ga0193728_11246373	3300019890	Soil	TRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDARDSLSEAARTVAAIEALHPQVAVLIVCDDERPKPTTGLPIVEKWEALETLSDDIRRLYASATN
Ga0193728_13614112	3300019890	Soil	LLTRNGFAVETTKKVANAVDLVWRQRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN
Ga0210381_101496272	3300021078	Groundwater Sediment	EAPPPATRENDGGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS
Ga0193719_102440742	3300021344	Soil	TRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVLIVCDDERPKPTTGLPIVEKWEALETLSDDIRRLYASATN
Ga0207692_101126751	3300025898	Corn, Switchgrass And Miscanthus Rhizosphere	PIRVLLASRDDRFLRLSRFLLTRDDFAVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS
Ga0207654_112949632	3300025911	Corn Rhizosphere	LRLSRFLLTRDDFSVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS
Ga0207646_112658901	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	NPMPTSLERVAASPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIPNAVDLVWRHRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN
Ga0207700_108469461	3300025928	Corn, Switchgrass And Miscanthus Rhizosphere	GTRDEQFLRLAEFLLERNGFAVETTKKIPNAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN
Ga0209027_10865562	3300026300	Grasslands Soil	MIRALGSSAKTDAGSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIASAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYSSATD
Ga0209378_11315652	3300026528	Soil	GSPTDSPTRPIRVLLGTRDEQFLRLAEFLLARNGFAVETTKKIPNAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATALPIMEKWEALETLSDDIRRSYASATN
Ga0307301_101143271	3300028719	Soil	DEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0307280_101604462	3300028768	Soil	PPATRENDGGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS
Ga0307287_100753793	3300028796	Soil	VLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0307284_103148932	3300028799	Soil	RPIRVLLGTRDDEFLRLAQFLLTRNGFAVESTKKIVESVDLVWRQRLDVVVIDASESLSEAARTAAAIEALHPQVGVMIVCDDERPRPSTGLEIKEKWEALETLADDIRRSYASAPS
Ga0307296_101735341	3300028819	Soil	RGVNGRPLAASSSMPMDPEAGTDSPTRPIRVLLGTRDEQFLRQAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVLIVCDDERPKPTTGLPIVEKWEALETLSDDIRRLYASATN
Ga0307296_104272082	3300028819	Soil	EFLRLAQFLLTRNGFAVESTKKIVDSVDLVWKKRLDVVVLDASESLSEAARTAAAIEALHPQVGVRMVCDDERPRPTTGLELVDKWEALETMADDIRRSYATATN
Ga0307296_107075651	3300028819	Soil	NGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN
Ga0307310_100048881	3300028824	Soil	GVNGRPDAPARPATKEAANGLPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVEATKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0307312_107732222	3300028828	Soil	AVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTVAAIEALHPQVAVLIVCDDERPKPTTGLPIVEKWEALETLSDDIRRLYASATN
Ga0307312_109450241	3300028828	Soil	RPMLTTHGAATDSPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIATAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN
Ga0307300_102545332	3300028880	Soil	PDAPARPATKEAANGLPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0307277_100902211	3300028881	Soil	ATREDDGGAPTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS
Ga0307277_102034801	3300028881	Soil	ADGDGSAPARPIHVLLGSRDDRFLRLARFLLTRNDFVVESTKRLPSAVEYVERHGSDVVVLDASDSLSEAAKTVAAIEALNPEVRVLLVCDADRPRPTSGLNVMEKWQALESLADEIKLSHAGSRAWN
Ga0307277_105514881	3300028881	Soil	IRVLLGTRDEQFLRLAEFLLTRNGFAVETTKKIANAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATD
Ga0308194_101363202	3300031421	Soil	PTRPIRILLGSRDDRFLRLARFLLTRNDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAW
Ga0308175_1013788441	3300031938	Soil	ALPSAIEGPTASPTRPIRVLLGTRDEQFLRLAEFLLTRNGFAVGATKKIGDAVDLVWRQRLDVVVLDASESLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMDKWEALETLSDDIRRSYASATN
Ga0310906_105548782	3300032013	Soil	GRDGNGAAIERPIRVLLASRDDRFLRLSRFLLTRDDFSVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS
Ga0310890_112393462	3300032075	Soil	GAAIERPIRVLLASRDDRFLRLSRFLLTRDDFSVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS
Ga0307471_1036220791	3300032180	Hardwood Forest Soil	NGATPTAPGLAAGAQRASVASPTRPIRVLLGTRAEELLRLAQFLLTRNGFAVESTKKLVDAVDLVWRQRLDVVVLDASDSLSEAARTAAAIEALHPQVGVVIVCDDERPRPTTGLEIVEKWEALETLADDIRLSYASATN
Ga0307472_1020447542	3300032205	Hardwood Forest Soil	PLAASNPMPTSLERVAASPTRPIRVLLGTRDEQFLRLAEFLLERNGFAVETTKKIPNAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVGVLIVCDDERPKPATGLPIMEKWEALETLSDDIRRSYASATN
Ga0310810_112584022	3300033412	Soil	NDGGAPTRPIRVLLGSRDDRFLRLARFLLTRSDFAVESTKRVPSAVDLVERHGSDFVVLDASDSLSEAARTVAAIEALNPQVGVLLVCDADRPRPTTGLNVVEKWHALETLADEIKLSHAGSRAWS
Ga0310811_113386732	3300033475	Soil	RLAEFLLTRNGFAVETTKKIATAVDLVWRHRLDVVVLDASDSLSEAARTAAAIEALHPQVAVVIVCDDERPKPATGLPIKEKWEALETLSDDIRRSYASATN
Ga0373959_0151046_38_382	3300034820	Rhizosphere Soil	LLASRDDRFLRLSRFLLTRDDFSVESTKRPPSAVDFVERHGTDVVVLDASDSLSEAARTVAAIEALNPQVRVLLVCDAERPRPTTGLNVMEKWQSLETLADEIKLSQTGSRAWS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084523

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences