Metagenome / Metatranscriptome Family F084519

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084519
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	48 residues
Representative Sequence	PLTILHYRGKRLNSAGQPGTYKELFTVTTENKDGQWVVTKYDAMY
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	0.00 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	90.18 %
Associated GOLD sequencing projects	83
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.36

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (90.179 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil (10.714 % of family members)
Environment Ontology (ENVO)	Unclassified (32.143 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (50.893 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 46.58% Coil/Unstructured: 53.42%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.36
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.36
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF07690	MFS_1	43.75
PF04892	VanZ	6.25
PF00478	IMPDH	3.57
PF08974	DUF1877	3.57
PF01522	Polysacc_deac_1	0.89
PF13502	AsmA_2	0.89
PF10503	Esterase_PHB	0.89
PF14520	HHH_5	0.89
PF15596	Imm57	0.89
PF07969	Amidohydro_3	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0726	Peptidoglycan/xylan/chitin deacetylase, PgdA/NodB/CDA1 family	Cell wall/membrane/envelope biogenesis [M]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	90.18 %
Unclassified	root	N/A	9.82 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	79.46 %
Unclassified	root	N/A	9.82 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %
unclassified Bacteria	no rank	All Organisms → cellular organisms → Bacteria → unclassified Bacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.25 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	1.79 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.89 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Candidatus Fischerbacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria	0.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.89 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	0.89 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Pirellulales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Candidatus Fischerbacteria bacterium RBG_13_37_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria → Candidatus Fischerbacteria bacterium RBG_13_37_8	0.89 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Pirellulaceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Candidatus Fischerbacteria bacterium RBG_13_37_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria → Candidatus Fischerbacteria bacterium RBG_13_37_8	0.89 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
unclassified Pirellulaceae	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → unclassified Pirellulaceae	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Candidatus Fischerbacteria bacterium RBG_13_37_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria → Candidatus Fischerbacteria bacterium RBG_13_37_8	0.89 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	9.82 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	5.36 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1.79 %
Pirellulaceae bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → unclassified Pirellulaceae → Pirellulaceae bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Candidatus Fischerbacteria bacterium RBG_13_37_8	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria → Candidatus Fischerbacteria bacterium RBG_13_37_8	0.89 %
bacterium ADurb.Bin374	species	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	0.89 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001546\|JGI12659J15293_10122659	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300001661\|JGI12053J15887_10277642	All Organisms → cellular organisms → Bacteria → Acidobacteria	825	Open in IMG/M
3300002245\|JGIcombinedJ26739_101114794	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	676	Open in IMG/M
3300002245\|JGIcombinedJ26739_101429774	All Organisms → cellular organisms → Bacteria → Acidobacteria	585	Open in IMG/M
3300002245\|JGIcombinedJ26739_101477522	All Organisms → cellular organisms → Bacteria → Acidobacteria	574	Open in IMG/M
3300004082\|Ga0062384_101240277	Not Available	543	Open in IMG/M
3300004091\|Ga0062387_100155140	All Organisms → cellular organisms → Bacteria → Acidobacteria	1324	Open in IMG/M
3300004092\|Ga0062389_100041935	All Organisms → cellular organisms → Bacteria	3558	Open in IMG/M
3300004092\|Ga0062389_103273226	Not Available	607	Open in IMG/M
3300004121\|Ga0058882_1735174	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300005441\|Ga0070700_100440044	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	989	Open in IMG/M
3300005467\|Ga0070706_100466891	All Organisms → cellular organisms → Bacteria → Acidobacteria	1174	Open in IMG/M
3300005591\|Ga0070761_10298860	All Organisms → cellular organisms → Bacteria	969	Open in IMG/M
3300005610\|Ga0070763_10113929	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1378	Open in IMG/M
3300005610\|Ga0070763_10139588	All Organisms → cellular organisms → Bacteria → unclassified Bacteria → bacterium ADurb.Bin374	1257	Open in IMG/M
3300005610\|Ga0070763_10777015	All Organisms → cellular organisms → Bacteria → Acidobacteria	565	Open in IMG/M
3300005610\|Ga0070763_10906227	Not Available	525	Open in IMG/M
3300005921\|Ga0070766_10282088	All Organisms → cellular organisms → Bacteria → Acidobacteria	1062	Open in IMG/M
3300005921\|Ga0070766_10368793	All Organisms → cellular organisms → Bacteria → Acidobacteria	935	Open in IMG/M
3300005921\|Ga0070766_10562013	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Pirellulales → Pirellulaceae → unclassified Pirellulaceae → Pirellulaceae bacterium	763	Open in IMG/M
3300005921\|Ga0070766_11139453	All Organisms → cellular organisms → Bacteria → Acidobacteria	539	Open in IMG/M
3300006028\|Ga0070717_10102323	All Organisms → cellular organisms → Bacteria	2434	Open in IMG/M
3300006028\|Ga0070717_10755408	All Organisms → cellular organisms → Bacteria → Acidobacteria	884	Open in IMG/M
3300006162\|Ga0075030_100260346	All Organisms → cellular organisms → Bacteria → Acidobacteria	1390	Open in IMG/M
3300006176\|Ga0070765_100011064	All Organisms → cellular organisms → Bacteria	6325	Open in IMG/M
3300006176\|Ga0070765_100405297	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1273	Open in IMG/M
3300009518\|Ga0116128_1169280	All Organisms → cellular organisms → Bacteria → Acidobacteria	620	Open in IMG/M
3300009525\|Ga0116220_10312265	All Organisms → cellular organisms → Bacteria → Acidobacteria	693	Open in IMG/M
3300009632\|Ga0116102_1157518	All Organisms → cellular organisms → Bacteria → Acidobacteria	623	Open in IMG/M
3300009632\|Ga0116102_1175656	All Organisms → cellular organisms → Bacteria → Acidobacteria	581	Open in IMG/M
3300009759\|Ga0116101_1030582	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300009762\|Ga0116130_1162624	All Organisms → cellular organisms → Bacteria → Acidobacteria	705	Open in IMG/M
3300010159\|Ga0099796_10175332	All Organisms → cellular organisms → Bacteria → Acidobacteria	857	Open in IMG/M
3300010341\|Ga0074045_10933067	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300010379\|Ga0136449_102805051	All Organisms → cellular organisms → Bacteria → Acidobacteria	688	Open in IMG/M
3300011120\|Ga0150983_10109859	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1302	Open in IMG/M
3300011120\|Ga0150983_15275237	All Organisms → cellular organisms → Bacteria → Acidobacteria	597	Open in IMG/M
3300011269\|Ga0137392_10709111	All Organisms → cellular organisms → Bacteria → Acidobacteria	833	Open in IMG/M
3300012205\|Ga0137362_10267905	All Organisms → cellular organisms → Bacteria → Acidobacteria	1477	Open in IMG/M
3300012683\|Ga0137398_10194258	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1336	Open in IMG/M
3300012917\|Ga0137395_10355284	All Organisms → cellular organisms → Bacteria → Acidobacteria	1044	Open in IMG/M
3300012922\|Ga0137394_10808919	All Organisms → cellular organisms → Bacteria → Acidobacteria	785	Open in IMG/M
3300012927\|Ga0137416_11130307	All Organisms → cellular organisms → Bacteria → Acidobacteria	704	Open in IMG/M
3300014169\|Ga0181531_10212325	All Organisms → cellular organisms → Bacteria → Acidobacteria	1177	Open in IMG/M
3300014489\|Ga0182018_10173212	All Organisms → cellular organisms → Bacteria → Acidobacteria	1221	Open in IMG/M
3300014493\|Ga0182016_10612414	All Organisms → cellular organisms → Bacteria → Acidobacteria	618	Open in IMG/M
3300017925\|Ga0187856_1293696	Not Available	561	Open in IMG/M
3300017941\|Ga0187850_10399726	All Organisms → cellular organisms → Bacteria → Acidobacteria	599	Open in IMG/M
3300018002\|Ga0187868_1162725	All Organisms → cellular organisms → Bacteria → Acidobacteria	801	Open in IMG/M
3300018018\|Ga0187886_1263760	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300018034\|Ga0187863_10379360	All Organisms → cellular organisms → Bacteria → Acidobacteria	788	Open in IMG/M
3300018037\|Ga0187883_10086247	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1639	Open in IMG/M
3300018037\|Ga0187883_10105914	All Organisms → cellular organisms → Bacteria → Acidobacteria	1459	Open in IMG/M
3300018040\|Ga0187862_10826884	All Organisms → cellular organisms → Bacteria → Acidobacteria	535	Open in IMG/M
3300018047\|Ga0187859_10447067	All Organisms → cellular organisms → Bacteria → Acidobacteria	714	Open in IMG/M
3300018047\|Ga0187859_10897778	Not Available	510	Open in IMG/M
3300018088\|Ga0187771_10364856	All Organisms → cellular organisms → Bacteria → Acidobacteria	1215	Open in IMG/M
3300020582\|Ga0210395_11401844	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300021168\|Ga0210406_10898400	All Organisms → cellular organisms → Bacteria → Acidobacteria	666	Open in IMG/M
3300021403\|Ga0210397_10782411	All Organisms → cellular organisms → Bacteria → Acidobacteria	736	Open in IMG/M
3300021405\|Ga0210387_10602142	All Organisms → cellular organisms → Bacteria → Acidobacteria	976	Open in IMG/M
3300021420\|Ga0210394_11471378	All Organisms → cellular organisms → Bacteria → Acidobacteria	577	Open in IMG/M
3300021433\|Ga0210391_10154487	All Organisms → cellular organisms → Bacteria → Acidobacteria	1807	Open in IMG/M
3300021477\|Ga0210398_10717257	All Organisms → cellular organisms → Bacteria → Acidobacteria	808	Open in IMG/M
3300021478\|Ga0210402_10122957	All Organisms → cellular organisms → Bacteria → Acidobacteria	2347	Open in IMG/M
3300021479\|Ga0210410_10121072	All Organisms → cellular organisms → Bacteria	2320	Open in IMG/M
3300021479\|Ga0210410_10970640	All Organisms → cellular organisms → Bacteria → Acidobacteria	738	Open in IMG/M
3300022873\|Ga0224550_1014740	All Organisms → cellular organisms → Bacteria → Acidobacteria	1105	Open in IMG/M
3300024176\|Ga0224565_1039060	All Organisms → cellular organisms → Bacteria → Acidobacteria	547	Open in IMG/M
3300025406\|Ga0208035_1030924	All Organisms → cellular organisms → Bacteria → Acidobacteria	851	Open in IMG/M
3300025432\|Ga0208821_1003498	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	5387	Open in IMG/M
3300025453\|Ga0208455_1086289	All Organisms → cellular organisms → Bacteria → Acidobacteria	614	Open in IMG/M
3300025496\|Ga0208191_1001309	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	12822	Open in IMG/M
3300025576\|Ga0208820_1117658	All Organisms → cellular organisms → Bacteria → Acidobacteria	631	Open in IMG/M
3300025576\|Ga0208820_1129045	All Organisms → cellular organisms → Bacteria → Acidobacteria	589	Open in IMG/M
3300027537\|Ga0209419_1100349	All Organisms → cellular organisms → Bacteria → Acidobacteria	576	Open in IMG/M
3300027729\|Ga0209248_10104450	All Organisms → cellular organisms → Bacteria → Acidobacteria	854	Open in IMG/M
3300027825\|Ga0209039_10125614	All Organisms → cellular organisms → Bacteria → Acidobacteria	1082	Open in IMG/M
3300027895\|Ga0209624_10257768	All Organisms → cellular organisms → Bacteria → Acidobacteria	1160	Open in IMG/M
3300027986\|Ga0209168_10359551	All Organisms → cellular organisms → Bacteria → Acidobacteria	711	Open in IMG/M
3300028020\|Ga0265351_1026763	All Organisms → cellular organisms → Bacteria → Acidobacteria	516	Open in IMG/M
3300028047\|Ga0209526_10483640	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Fischerbacteria → Candidatus Fischerbacteria bacterium RBG_13_37_8	809	Open in IMG/M
3300028780\|Ga0302225_10371556	All Organisms → cellular organisms → Bacteria → Acidobacteria	673	Open in IMG/M
3300028806\|Ga0302221_10101035	All Organisms → cellular organisms → Bacteria → Acidobacteria	1281	Open in IMG/M
3300028806\|Ga0302221_10540161	All Organisms → cellular organisms → Bacteria → Acidobacteria	509	Open in IMG/M
3300029914\|Ga0311359_10723228	All Organisms → cellular organisms → Bacteria → Acidobacteria	710	Open in IMG/M
3300029953\|Ga0311343_11043179	All Organisms → cellular organisms → Bacteria → Acidobacteria	638	Open in IMG/M
3300029953\|Ga0311343_11275400	All Organisms → cellular organisms → Bacteria → Acidobacteria	555	Open in IMG/M
3300029982\|Ga0302277_1084317	All Organisms → cellular organisms → Bacteria → Acidobacteria	1422	Open in IMG/M
3300029999\|Ga0311339_11210995	Not Available	691	Open in IMG/M
3300030007\|Ga0311338_10277172	All Organisms → cellular organisms → Bacteria	1867	Open in IMG/M
3300030007\|Ga0311338_11934722	All Organisms → cellular organisms → Bacteria → Acidobacteria	526	Open in IMG/M
3300030045\|Ga0302282_1230320	All Organisms → cellular organisms → Bacteria → Acidobacteria	690	Open in IMG/M
3300030507\|Ga0302192_10239528	All Organisms → cellular organisms → Bacteria → Acidobacteria	770	Open in IMG/M
3300030507\|Ga0302192_10388280	Not Available	572	Open in IMG/M
3300030520\|Ga0311372_10484485	All Organisms → cellular organisms → Bacteria	1825	Open in IMG/M
3300030580\|Ga0311355_10744697	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	906	Open in IMG/M
3300030688\|Ga0311345_10242122	All Organisms → cellular organisms → Bacteria → Acidobacteria	1772	Open in IMG/M
3300031231\|Ga0170824_128935169	Not Available	627	Open in IMG/M
3300031524\|Ga0302320_10490522	All Organisms → cellular organisms → Bacteria → Acidobacteria	1493	Open in IMG/M
3300031524\|Ga0302320_12206708	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300031718\|Ga0307474_10217762	All Organisms → cellular organisms → Bacteria → Acidobacteria	1457	Open in IMG/M
3300031718\|Ga0307474_10691402	All Organisms → cellular organisms → Bacteria → Acidobacteria	805	Open in IMG/M
3300031718\|Ga0307474_11115472	All Organisms → cellular organisms → Bacteria → Acidobacteria	624	Open in IMG/M
3300031753\|Ga0307477_11090054	All Organisms → cellular organisms → Bacteria → Acidobacteria	521	Open in IMG/M
3300031754\|Ga0307475_10252351	All Organisms → cellular organisms → Bacteria → Acidobacteria	1414	Open in IMG/M
3300031823\|Ga0307478_10934335	All Organisms → cellular organisms → Bacteria → Acidobacteria	725	Open in IMG/M
3300033983\|Ga0371488_0025513	All Organisms → cellular organisms → Bacteria → Acidobacteria	4171	Open in IMG/M
3300034163\|Ga0370515_0160887	All Organisms → cellular organisms → Bacteria → Acidobacteria	962	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.11%
Aquatic	Environmental → Aquatic	25.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	55.36%
Freshwater	Environmental → Aquatic → Freshwater	25.00%
Peat	Environmental → Terrestrial → Peat	17.86%
Sediment	Environmental → Aquatic → Sediment	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.79%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	25.00%
Loam	Environmental → Terrestrial → Soil → Loam	24.11%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	17.86%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	20.54%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	17.86%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.96%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	15.18%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	9.82%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.68%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.71%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	10.71%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	9.82%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	9.82%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	8.93%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	8.04%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	7.14%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	6.25%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	5.36%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	5.36%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	1.79%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Untreated Peat Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Untreated Peat Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Bog	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Bog	0.89%
Palsa	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Palsa	0.89%
Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Soil	0.89%
Fen	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Plant Litter	Environmental → Terrestrial → Plant Litter → Unclassified → Unclassified → Plant Litter	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001546	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1	Environmental	Open in IMG/M
3300001661	Mediterranean Blodgett CA OM1_O3 (Mediterranean Blodgett coassembly)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004082	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3	Environmental	Open in IMG/M
3300004091	Coassembly of ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300004121	Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF109 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005591	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF1	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006176	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5	Environmental	Open in IMG/M
3300009518	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_150	Environmental	Open in IMG/M
3300009525	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_7_NC metaG	Environmental	Open in IMG/M
3300009632	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40	Environmental	Open in IMG/M
3300009759	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_10	Environmental	Open in IMG/M
3300009762	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_17_40	Environmental	Open in IMG/M
3300010159	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_3	Environmental	Open in IMG/M
3300010341	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM2	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014169	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_10_metaG	Environmental	Open in IMG/M
3300014489	Permafrost microbial communities from Stordalen Mire, Sweden - 812P2M metaG	Environmental	Open in IMG/M
3300014493	Permafrost microbial communities from Stordalen Mire, Sweden - 712S2M metaG	Environmental	Open in IMG/M
3300017925	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_40	Environmental	Open in IMG/M
3300017941	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_4_150	Environmental	Open in IMG/M
3300018002	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_13_40	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300018034	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10	Environmental	Open in IMG/M
3300018037	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_10	Environmental	Open in IMG/M
3300018040	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_150	Environmental	Open in IMG/M
3300018047	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_10_10	Environmental	Open in IMG/M
3300018088	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_10_MG	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021168	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021405	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021433	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022873	Peat soil microbial communities from Stordalen Mire, Sweden - 717 P3 10-14	Environmental	Open in IMG/M
3300024176	Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLU1	Environmental	Open in IMG/M
3300025406	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_11_10 (SPAdes)	Environmental	Open in IMG/M
3300025432	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_20_40 (SPAdes)	Environmental	Open in IMG/M
3300025453	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_40 (SPAdes)	Environmental	Open in IMG/M
3300025496	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_13_40 (SPAdes)	Environmental	Open in IMG/M
3300025576	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_16_40 (SPAdes)	Environmental	Open in IMG/M
3300027537	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M3 (SPAdes)	Environmental	Open in IMG/M
3300027729	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP04_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027825	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM1 (SPAdes)	Environmental	Open in IMG/M
3300027895	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_O1 (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028020	Soil microbial communities from Maridalen valley, Oslo, Norway - NSE4	Environmental	Open in IMG/M
3300028047	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM2H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300028780	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E3_2	Environmental	Open in IMG/M
3300028806	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E2_1	Environmental	Open in IMG/M
3300029914	III_Bog_E2 coassembly	Environmental	Open in IMG/M
3300029953	II_Bog_E3 coassembly	Environmental	Open in IMG/M
3300029982	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Bog_N3_1	Environmental	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030007	I_Palsa_E1 coassembly	Environmental	Open in IMG/M
3300030045	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - III_Fen_E1_3	Environmental	Open in IMG/M
3300030507	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Bog_E3_2	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030580	II_Palsa_N1 coassembly	Environmental	Open in IMG/M
3300030688	II_Bog_N2 coassembly	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031524	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Bog_T0_3	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300033983	Lab enriched peat soil microbial communities from McLean, Ithaca, NY, United States - MB23AN SIP fraction	Environmental	Open in IMG/M
3300034163	Peat soil microbial communities from wetlands in Alaska, United States - Goldstream_04D_14	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI12659J15293_101226591	3300001546	Forest Soil	GKRLTSPGQSATYRELFTVTEENKNGQWLVSKYDAMY*
JGI12053J15887_102776421	3300001661	Forest Soil	PPLIILHYRGKRRNSPDQPGIYQELFTVTAENKTGEWVVTKYDAMY*
JGIcombinedJ26739_1011147941	3300002245	Forest Soil	LLHYRGRRQYGGGKSGTYTELFTVTTENKDGRWVVTKYDAMY*
JGIcombinedJ26739_1014297742	3300002245	Forest Soil	TILHYRGKRLTSPGQSATYRELFTVTEENKNGQWLVSKYDAMY*
JGIcombinedJ26739_1014775221	3300002245	Forest Soil	EWESAPPLTLLHYRGRRQYGGGKSGSYTELFTVTTENKGGQWVVTKYDAMY*
Ga0062384_1012402771	3300004082	Bog Forest Soil	LSWELAEWESTPPLTILHYRGKRQYGGGQPGTYQELFTVTTEKKEGQWMVTKYDAMY*
Ga0062387_1001551403	3300004091	Bog Forest Soil	ILHYRGKRKYGADKPGTYQELFTVTTEDKEGQWVVTKYDAMY*
Ga0062389_1000419355	3300004092	Bog Forest Soil	SAPPLTILHYRGKRKYGADKPGTYQELFTVTTEDKEGQWVVTKYDAMY*
Ga0062389_1032732261	3300004092	Bog Forest Soil	AEWESTPPLTILHYHGKRLNSPGQPGTYQELFTVTSENKSGQWVVTKYDAMY*
Ga0058882_17351741	3300004121	Forest Soil	LTILHYRGKRRYGADKPGTYQELFTVTTENKDGEWVVTKYDAMY*
Ga0070700_1004400441	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	EDAPPLVILHFRGDRQTTAGQDPTYKELFSVTTENKDGEWVVTKYDAMY*
Ga0070706_1004668912	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	SWELVDWEDAPPLIILHYRGKRRNSLDQPGIYQELFTVTTENKSGEWVVTKYDAMY*
Ga0070761_102988601	3300005591	Soil	ISWELVEWEEAPPLIILHYRGKRESSSGAPDKELFTVTTENKNGEWVVTKYDAMY*
Ga0070763_101139291	3300005610	Soil	LTILHYRGKRLTSLSQSGTYKELFTVTEENKDGLWVVTKYDAMY*
Ga0070763_101395883	3300005610	Soil	LSWELAEWESAAPLTILHYRGKRLTGPGQSTTYRELFTVTTENKDGQWVVTKYDAMY*
Ga0070763_107770152	3300005610	Soil	PLISWELAEWENAPPLTILHYRGKRNYGAGQSGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0070763_109062271	3300005610	Soil	RGKRLTAPGQPGTYKELFTVTTENKDGQWVVTKYDSMY*
Ga0070766_102820882	3300005921	Soil	PPLTILHYRGKRLTAVGQPATYKELFTVTTENKDGQWVVTKYDAMY*
Ga0070766_103687931	3300005921	Soil	PLTILHYRGKRLNSAGQPGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0070766_105620132	3300005921	Soil	LSWELAEWESAPPLTILHYRGKRLNNPGEPGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0070766_111394531	3300005921	Soil	LAEWESAPPLTILHYRGKRLTSPNQSSTYRELFTVTEENKDGQWLVTKYDAIY*
Ga0070717_101023234	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	LLSWELVDWEDAPPLIILHYRGKRRNSLDQPGIYQELFTVTTENKSGEWVVTKYDAMY*
Ga0070717_107554081	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	ILHYRGKRRNSPDQPGIYQELFTVTAENKNGEWAVTKYDAMY*
Ga0075030_1002603462	3300006162	Watersheds	VDWEDAPPLIILHYRGKRSNGGGQAGTYQELFTVTTEKKNGDWAVTKYDAMY*
Ga0070765_1000110641	3300006176	Soil	EWENAPPLTILHYRGKRNYGAGQSGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0070765_1004052971	3300006176	Soil	RRQYGGGKSGTYTELFTVTTENKDGRWVVTKYDAMY*
Ga0070765_1005289302	3300006176	Soil	SWELVEWEEAPPLIILHYRGKRESSTGATDKELFTVTTENKNGEWIVTKYDAMY*
Ga0116128_11692802	3300009518	Peatland	LAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKNGQWVVTKYDAMY*
Ga0116220_103122651	3300009525	Peatlands Soil	YRGKRLTGPGQSGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0116102_11575182	3300009632	Peatland	ELAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKNGQWVVTKYDAMY*
Ga0116102_11756562	3300009632	Peatland	ELAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKDGQWVVTKYDAMY*
Ga0116101_10305821	3300009759	Peatland	KRLNSPSQSSTYHELFTVTTENKDGQWVVTKYDAMY*
Ga0116130_11626241	3300009762	Peatland	LHYRGQRLNHAGQPGTYQELFTVTTENKDGVWVVTKYDAMY*
Ga0099796_101753322	3300010159	Vadose Zone Soil	PFIILHYLGKRRNSPDQAGIYQELFTVTAENKSGEWIITKYDAMY*
Ga0074045_109330672	3300010341	Bog Forest Soil	PLTILHYRGKRLSTAGQPATYKELFTVTTENKDGQWVVTKYDAMY*
Ga0136449_1028050512	3300010379	Peatlands Soil	LTLLHYRGKRLNTPGQAGTYRELFTVTTENKDGQWVVTKYDAMY*
Ga0150983_101098593	3300011120	Forest Soil	WELAEWESEPPLTILHYRGKRRYGADKPGTYQELFTVTTENKDGEWVVTKYDAMY*
Ga0150983_152752371	3300011120	Forest Soil	LAEWESAPPLTILHYRGKRSYGASQPGTYKELFTVTTENKDGQWVVTKYDAMY*
Ga0137392_107091111	3300011269	Vadose Zone Soil	ILHYRGKRRNSPDQPGIYQELFTVTTENKNGEWVVTKYDAMY*
Ga0137362_102679051	3300012205	Vadose Zone Soil	LSWELVEWEQAPPLVILHYRGKRSNGPSQSGTYKELFTVTTENKGGEWVVTKYDAMY*
Ga0137398_101942583	3300012683	Vadose Zone Soil	EKEHPLLSWELAEWESAPPLTILHYRGKRQYGGGQPGTYQELFTVTSENKAGQWVVTKYDAMY*
Ga0137395_103552841	3300012917	Vadose Zone Soil	WEDAPPLIILHYRGKRRNSPDQPGIYQELFTVTTENKSGEWVVTKYDSMY*
Ga0137394_108089191	3300012922	Vadose Zone Soil	LQSWELAEWEEARPLIILHYRGMRRNSLTQAGTYKELFTVTTENKSGEWVVTKYDAMY*
Ga0137416_111303072	3300012927	Vadose Zone Soil	DAPPLIILHYRGKRRNSPDQPGIYQELFTVTAENKSGEWVVTKYDAMY*
Ga0181531_102123252	3300014169	Bog	APPLTILHYRGKRLTAVGQPATYKELFTVTTEHKDGQWVVTKYDAMY*
Ga0182018_101732122	3300014489	Palsa	HYRGKRLNHAGQSGTYQELFTVTTENKDGQWMVTKYDAMY*
Ga0182016_106124141	3300014493	Bog	PLLSWELAEWESAPPLTILHYRGKRLTTAGQPGTYTELFTVTTENKDGQWVVTKYDAMY*
Ga0187856_12936961	3300017925	Peatland	APPLTILHYRGKRRYGSGQAGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0187850_103997262	3300017941	Peatland	VLAEWESASPLTILHYRGKRLDHAGQPGTYQELFTVTTENKNGQWMVTKYDAMY
Ga0187868_11627251	3300018002	Peatland	ELAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0187886_12637602	3300018018	Peatland	ESASPLTILHDRGKRLDHAGQPGTYQELFTVTTENKNGQWMVTKYDAMY
Ga0187863_103793602	3300018034	Peatland	ESAPPLTILHYRGKREYGKGQPGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0187883_100862473	3300018037	Peatland	HYRGKRLNSPSQSSTYHELFTVTTENKDGQWVVTKYDAMY
Ga0187883_101059141	3300018037	Peatland	QHPLLSWELAEWESAPPLTILHYRGKRRYGNGQPGTYQELFTVTTENKEGHWVVTKYDAM
Ga0187862_108268842	3300018040	Peatland	RGKRRYGNGQPGTYQELFTVTTENKDGHWVVTKYDAMY
Ga0187859_104470672	3300018047	Peatland	TILHYRGKRRYGNGQPGTYQELFTVTTENKDGHWVVTKYDAMY
Ga0187859_108977781	3300018047	Peatland	ILHYRGKREYGGGKSGTYTELFTVTAENKDGQWVVTKYDAMY
Ga0187771_103648562	3300018088	Tropical Peatland	LHYRGRRRTAPDQPGTYKELFTVTTSNKDGEWVVTKYDAMY
Ga0210403_105673452	3300020580	Soil	LVEWEEAPPLIILHYRGKRESSSGAPDKELFTVTTENKNGEWVVTKYDAMY
Ga0210395_114018441	3300020582	Soil	SWELAEWESAPPLTILHYRGKRLNHAGQPGTYQELFTVTTENKDGEWVVTKYDAMY
Ga0210406_108984003	3300021168	Soil	HYRGKRSYGASQPGTYKELFTVTTEKKDGQWVVTKYDAMY
Ga0210397_107824112	3300021403	Soil	ILHYRGKRLSQVGQPGTYRELFTVTTENKAGQWVVTKYDAMY
Ga0210387_106021422	3300021405	Soil	HYRGKRNYGAGQSGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0210394_114713781	3300021420	Soil	LSWELVEWEDRPPLIILHYRGKRENNPGQSGTYQELFTVTTENKSGEWVVTKYDAMY
Ga0210391_101544871	3300021433	Soil	RGKRRYGTSQPGTYQELFTVTAENKEGHWVVTKYDAMY
Ga0210391_110113502	3300021433	Soil	PPLIILHYRGKRESSSGAPDKELFTVTTENKNGEWVVTKYDAMY
Ga0210398_107172572	3300021477	Soil	EIAEWESAPPLTILHYRGRRSYGAGKPGNYQELFTVTTENKDGQWVVTKYDAMY
Ga0210402_101229574	3300021478	Soil	ELAEWESAPPLTILHYRGKRLNDPGQSGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0210410_101210724	3300021479	Soil	LISWELAEWENAPPLTILHYRGKRNYGAGQSGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0210410_109706401	3300021479	Soil	APPLIILHYRGKRRNSPSQPGTYKELFTVTVEKKSGDWVVTKYDAMY
Ga0224550_10147401	3300022873	Soil	LTILHYRGKRRNTTGQSGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0224565_10390602	3300024176	Plant Litter	YRGQRLNSPGQSGTYTGLLTVTNENKDGQWVVTKYDAMY
Ga0208035_10309242	3300025406	Peatland	RLTDPGQPATYKEIFTVTTENKDGQWVVTKYDSMY
Ga0208821_10034981	3300025432	Peatland	TILHYRGKRRYGSGQAGTYQELFTVTTENKNGQWVVTKYDAMY
Ga0208455_10862892	3300025453	Peatland	EWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKNGQWVVTKYDAMY
Ga0208191_100130917	3300025496	Peatland	PPLTILHYRGKRRYGSGQAGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0208820_11176581	3300025576	Peatland	WELAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKNGQWVVTKYDAMY
Ga0208820_11290451	3300025576	Peatland	WELAEWESAPPLTILHYRGKRRYGSGQAGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0209419_11003492	3300027537	Forest Soil	PLTILHYHGKRQYGGGQPGTYEELFTVTTEKKNSEWVVTKYDAMY
Ga0209248_101044503	3300027729	Bog Forest Soil	KRLTGPSQSATYRELFTVTEENKDGQWVVTKYDAMY
Ga0209039_101256141	3300027825	Bog Forest Soil	PLLSWELAEWESAPPLTILHYRGKRLTGPSQSATYRELFTVTEENKDGQWVVTKYDAMY
Ga0209624_102577681	3300027895	Forest Soil	PLTILHYRGKRLTSPGQSATYRELFTVTEENKNGQWLVSKYDAMY
Ga0209168_103595511	3300027986	Surface Soil	PPLTILHYRGKRQYGGGQPGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0265351_10267631	3300028020	Soil	GKRLTTAGQAATYKELFTVTTENKDGQWVVTKYDAMY
Ga0209526_104836401	3300028047	Forest Soil	EWESAPPLTILHYRGKRLNDLGQTGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0302225_103715561	3300028780	Palsa	PLTILHYHGKRLNSPNQPGTYKELFTVTAENKDGQWVVTKYDAMY
Ga0302221_101010353	3300028806	Palsa	KRLTDPGQPATYKEIFTVTTENKDGQWVVTKYDAMY
Ga0302221_105401611	3300028806	Palsa	KHPLLSWELAEWESAPPLTILHYRGKRRNTTGQPGTYKELFTVTTESKDGQWVVTKYDAM
Ga0311359_107232281	3300029914	Bog	HYRGKRLTAAGQPGTYTELFTVTTENKDGQWVVTKYDAMY
Ga0311343_110431791	3300029953	Bog	EKKHPLLSWELAEWESAPPLTILHYRGKRQYGGGQDGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0311343_112754001	3300029953	Bog	WELAEWESAPPLTILHYRGKRLNGPGQTGTYRELLTVTTENKDGLWVVTKYDPND
Ga0302277_10843171	3300029982	Bog	ILHYRGKRLTDPGQPATYKEIFTVTTENKDGQWVVTKYDSMY
Ga0311339_112109951	3300029999	Palsa	PPLTILHYRGKRLTDPGQPATYKEIFTVTTENKDGQWVVTKYDSMY
Ga0311338_102771723	3300030007	Palsa	SRGKRLNSPGQSSTYKELFTVTTENKDGQWVVTKYDAMY
Ga0311338_119347222	3300030007	Palsa	SSPPLTILHYRGKRLNHVGQPGTYKELFTVTTENKDGQWVVTKYDAMY
Ga0302282_12303201	3300030045	Fen	YRGKRLTAAGQPGTYTELFTVTTENKDGQWVVTKYDAMY
Ga0302192_102395282	3300030507	Bog	WELAEWESAPPLTILHYRGKRQYGGGQDGTYQELFTVTTENKEGQWVVTKYDAMY
Ga0302192_103882801	3300030507	Bog	ELAEWESAPPLTILHYRGKRQYGGGQDGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0311372_104844851	3300030520	Palsa	SAPPLTILHYRGKRLNSPGQSSTYKELFTVTTENKDGQWVVTKYDAMY
Ga0311355_107446971	3300030580	Palsa	QHPLLSWEIAEWESSPPLTILHYRGKRLNHVGQPGTYKELFTVTTENKDGQWVVTKYDAM
Ga0311345_102421221	3300030688	Bog	APPLTILHYRGKRQYGGGQDGTYQELFTVTTENKDGQWVVTKYDAMY
Ga0170824_1289351691	3300031231	Forest Soil	HYRGKRQYGGGQPGTYQELFTVTAENKSGQWVVTKYDAMY
Ga0302320_104905222	3300031524	Bog	LAEWESAPPLTILHYRGKRLTAVGQPATYKELFTVTTEHKDGQWVVTKYDAMY
Ga0302320_122067081	3300031524	Bog	EKKHPLLSWELAEWESAPPLTILHYRGKRQYGGGQDGTYQELFTVTTENKEGQWVVTKYDAMY
Ga0307474_102177621	3300031718	Hardwood Forest Soil	HYRGRRLTKPGESATYRELFTVTTENKDGQWVVTKYDAMY
Ga0307474_106914022	3300031718	Hardwood Forest Soil	EWESAPPLTILHYRGKRLTKPGESGTYRELFTVTTEHKDGQWVVTKYDAMY
Ga0307474_111154722	3300031718	Hardwood Forest Soil	ILHYRGTRSNVAGQTGTYQELFTVTTENKGAQWIVTKYDAMY
Ga0307477_110900542	3300031753	Hardwood Forest Soil	IILHYRSKRLANSGPDHPGIDQELFTVTTENKGGEWVVTKYDAMY
Ga0307475_102523511	3300031754	Hardwood Forest Soil	PLLSWELAEWESAPPLTILHYRGKRLNGGGKPGTYQELFTVTTEHKDGQWVVTKYDAMY
Ga0307478_109343352	3300031823	Hardwood Forest Soil	PLTILHYRGKRKYGSSQPGTYQELFTVTTENKDGEWVVTKYDAMY
Ga0371488_0025513_4007_4171	3300033983	Peat Soil	ELAEWESAPPLTILHYRGKRLNHAGQPGTYQELFTVTTENKDGEWVVTKYDAMY
Ga0370515_0160887_2_124	3300034163	Untreated Peat Soil	HYRGKRLTNAGQPGTYRELFTVTTENKDGRWVVTKYDAMY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084519

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences