Metagenome / Metatranscriptome Family F084449

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084449
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	59 residues
Representative Sequence	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQVWKDFDEKYKT
Number of Associated Samples	99
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	2.73 %
% of genes near scaffold ends (potentially truncated)	91.07 %
% of genes from short scaffolds (< 2000 bps)	91.07 %
Associated GOLD sequencing projects	91
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.28

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (52.679 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine (22.321 % of family members)
Environment Ontology (ENVO)	Unclassified (68.750 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (81.250 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 23.17% β-sheet: 0.00% Coil/Unstructured: 76.83%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.28
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.28
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF13578	Methyltransf_24	7.14
PF06941	NT5C	6.25
PF05050	Methyltransf_21	6.25
PF00154	RecA	1.79
PF04055	Radical_SAM	0.89
PF01370	Epimerase	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG4502	5'(3')-deoxyribonucleotidase	Nucleotide transport and metabolism [F]	6.25
COG0468	RecA/RadA recombinase	Replication, recombination and repair [L]	1.79

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
All Organisms	root	All Organisms	47.32 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
cellular organisms	root	All Organisms → cellular organisms	36.61 %
Viruses	superkingdom	All Organisms → Viruses	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	0.89 %
Eukaryota	superkingdom	All Organisms → cellular organisms → Eukaryota	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	2.68 %
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	1.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	0.89 %
Viridiplantae	kingdom	All Organisms → cellular organisms → Eukaryota → Viridiplantae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	2.68 %
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	1.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	0.89 %
Streptophyta	phylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1.79 %
Rhodospirillales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales	0.89 %
Streptophytina	subphylum	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina	0.89 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Flavobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia	1.79 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.89 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	0.89 %
Rhodospirillaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Flavobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales	1.79 %
Candidatus Endolissoclinum	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum	0.89 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.89 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Cryomorphaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae	1.79 %
unclassified Candidatus Endolissoclinum	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum	0.89 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.89 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
unclassified Cryomorphaceae	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae	1.79 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	0.89 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.89 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	52.68 %
Verrucomicrobia bacterium TMED56	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	19.64 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	9.82 %
Cryomorphaceae bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1.79 %
Candidatus Endolissoclinum sp. TMED37	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	0.89 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	0.89 %
Embryophyta	clade	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001419\|JGI11705J14877_10136464	Not Available	678	Open in IMG/M
3300001460\|JGI24003J15210_10077064	All Organisms → cellular organisms → Bacteria	1021	Open in IMG/M
3300001472\|JGI24004J15324_10097476	Not Available	762	Open in IMG/M
3300001589\|JGI24005J15628_10014934	All Organisms → cellular organisms → Bacteria	3470	Open in IMG/M
3300001948\|GOS2228_1014558	Not Available	984	Open in IMG/M
3300001974\|GOS2246_10179154	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Rhodospirillales → Rhodospirillaceae → Candidatus Endolissoclinum → unclassified Candidatus Endolissoclinum → Candidatus Endolissoclinum sp. TMED37	1745	Open in IMG/M
3300005402\|Ga0066855_10146032	Not Available	758	Open in IMG/M
3300005512\|Ga0074648_1025555	All Organisms → cellular organisms → Bacteria	3132	Open in IMG/M
3300005512\|Ga0074648_1094705	All Organisms → Viruses → Predicted Viral	1069	Open in IMG/M
3300005599\|Ga0066841_10053803	Not Available	652	Open in IMG/M
3300006002\|Ga0066368_10128811	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	869	Open in IMG/M
3300006025\|Ga0075474_10211526	Not Available	592	Open in IMG/M
3300006026\|Ga0075478_10164482	Not Available	688	Open in IMG/M
3300006193\|Ga0075445_10286655	Not Available	558	Open in IMG/M
3300006414\|Ga0099957_1071553	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	872	Open in IMG/M
3300006750\|Ga0098058_1173609	Not Available	565	Open in IMG/M
3300006802\|Ga0070749_10383599	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	777	Open in IMG/M
3300006867\|Ga0075476_10260973	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	616	Open in IMG/M
3300006867\|Ga0075476_10361449	Not Available	501	Open in IMG/M
3300006870\|Ga0075479_10383891	Not Available	544	Open in IMG/M
3300006902\|Ga0066372_10761723	Not Available	585	Open in IMG/M
3300006919\|Ga0070746_10096875	Not Available	1475	Open in IMG/M
3300007960\|Ga0099850_1061497	All Organisms → cellular organisms → Bacteria	1586	Open in IMG/M
3300007960\|Ga0099850_1115855	All Organisms → Viruses → Predicted Viral	1097	Open in IMG/M
3300007960\|Ga0099850_1194105	Not Available	801	Open in IMG/M
3300008050\|Ga0098052_1229469	Not Available	714	Open in IMG/M
3300009001\|Ga0102963_1157186	Not Available	915	Open in IMG/M
3300009124\|Ga0118687_10398854	Not Available	531	Open in IMG/M
3300009173\|Ga0114996_10218631	All Organisms → cellular organisms → Bacteria	1527	Open in IMG/M
3300009420\|Ga0114994_10318712	All Organisms → Viruses → Predicted Viral	1035	Open in IMG/M
3300009420\|Ga0114994_10562468	Not Available	749	Open in IMG/M
3300009786\|Ga0114999_11113844	Not Available	566	Open in IMG/M
3300009786\|Ga0114999_11277269	Not Available	521	Open in IMG/M
3300009786\|Ga0114999_11331614	Not Available	508	Open in IMG/M
3300010153\|Ga0098059_1247472	Not Available	687	Open in IMG/M
3300010296\|Ga0129348_1071697	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1236	Open in IMG/M
3300010299\|Ga0129342_1195748	Not Available	720	Open in IMG/M
3300010368\|Ga0129324_10194670	Not Available	826	Open in IMG/M
3300012920\|Ga0160423_11089632	Not Available	534	Open in IMG/M
3300012954\|Ga0163111_10775815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	911	Open in IMG/M
3300013010\|Ga0129327_10569733	All Organisms → cellular organisms → Eukaryota → Viridiplantae → Streptophyta → Streptophytina → Embryophyta	621	Open in IMG/M
3300016771\|Ga0182082_1532498	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Flavobacteriia → Flavobacteriales → Cryomorphaceae → unclassified Cryomorphaceae → Cryomorphaceae bacterium	1166	Open in IMG/M
3300017719\|Ga0181390_1139640	Not Available	618	Open in IMG/M
3300017956\|Ga0181580_10015169	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6092	Open in IMG/M
3300017956\|Ga0181580_10374182	Not Available	954	Open in IMG/M
3300017968\|Ga0181587_10917455	Not Available	541	Open in IMG/M
3300018413\|Ga0181560_10396377	Not Available	634	Open in IMG/M
3300018424\|Ga0181591_10187627	All Organisms → Viruses → Predicted Viral	1634	Open in IMG/M
3300018424\|Ga0181591_10396237	All Organisms → Viruses → Predicted Viral	1029	Open in IMG/M
3300018424\|Ga0181591_10624789	Not Available	768	Open in IMG/M
3300018424\|Ga0181591_10633173	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	761	Open in IMG/M
3300018424\|Ga0181591_11158451	Not Available	517	Open in IMG/M
3300018426\|Ga0181566_11207219	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	503	Open in IMG/M
3300019751\|Ga0194029_1063596	Not Available	620	Open in IMG/M
3300019756\|Ga0194023_1118696	All Organisms → cellular organisms → Bacteria	538	Open in IMG/M
3300020056\|Ga0181574_10509053	Not Available	673	Open in IMG/M
3300020280\|Ga0211591_1119725	Not Available	546	Open in IMG/M
3300020303\|Ga0211692_1041690	Not Available	569	Open in IMG/M
3300020326\|Ga0211561_1058849	Not Available	825	Open in IMG/M
3300020337\|Ga0211508_1021147	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1569	Open in IMG/M
3300020378\|Ga0211527_10147024	Not Available	672	Open in IMG/M
3300020379\|Ga0211652_10200023	Not Available	610	Open in IMG/M
3300020389\|Ga0211680_10329591	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	561	Open in IMG/M
3300020420\|Ga0211580_10173791	All Organisms → cellular organisms → Bacteria	894	Open in IMG/M
3300020469\|Ga0211577_10729630	Not Available	578	Open in IMG/M
3300021084\|Ga0206678_10213646	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	953	Open in IMG/M
3300021352\|Ga0206680_10101503	All Organisms → cellular organisms → Bacteria	1109	Open in IMG/M
3300021442\|Ga0206685_10120768	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	870	Open in IMG/M
3300021791\|Ga0226832_10322366	All Organisms → cellular organisms → Bacteria	635	Open in IMG/M
3300021958\|Ga0222718_10606817	Not Available	512	Open in IMG/M
3300021964\|Ga0222719_10816036	Not Available	511	Open in IMG/M
3300022198\|Ga0196905_1172971	Not Available	549	Open in IMG/M
3300022200\|Ga0196901_1205659	Not Available	630	Open in IMG/M
3300022200\|Ga0196901_1277795	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	511	Open in IMG/M
3300022909\|Ga0255755_1146641	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	961	Open in IMG/M
3300022935\|Ga0255780_10164173	All Organisms → cellular organisms → Bacteria	1194	Open in IMG/M
3300023084\|Ga0255778_10089287	All Organisms → Viruses → Predicted Viral	1772	Open in IMG/M
3300023170\|Ga0255761_10468713	Not Available	604	Open in IMG/M
3300023173\|Ga0255776_10043478	All Organisms → Viruses → Predicted Viral	3539	Open in IMG/M
3300023175\|Ga0255777_10614442	Not Available	537	Open in IMG/M
3300023180\|Ga0255768_10210787	All Organisms → Viruses → Predicted Viral	1161	Open in IMG/M
3300023235\|Ga0222634_1056974	Not Available	553	Open in IMG/M
3300025137\|Ga0209336_10091981	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	870	Open in IMG/M
3300025138\|Ga0209634_1021640	All Organisms → cellular organisms → Bacteria	3570	Open in IMG/M
3300025141\|Ga0209756_1029096	All Organisms → Viruses → Predicted Viral	3001	Open in IMG/M
3300025674\|Ga0208162_1131252	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	707	Open in IMG/M
3300025687\|Ga0208019_1045133	All Organisms → Viruses → Predicted Viral	1553	Open in IMG/M
3300025712\|Ga0209305_1032744	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1918	Open in IMG/M
3300025803\|Ga0208425_1061780	Not Available	918	Open in IMG/M
3300025809\|Ga0209199_1017279	All Organisms → Viruses → Predicted Viral	4703	Open in IMG/M
3300025815\|Ga0208785_1063746	Not Available	990	Open in IMG/M
3300025889\|Ga0208644_1239751	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	758	Open in IMG/M
3300026087\|Ga0208113_1036802	All Organisms → cellular organisms → Bacteria	1362	Open in IMG/M
3300026211\|Ga0208132_1043344	Not Available	1109	Open in IMG/M
3300027522\|Ga0209384_1032803	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1520	Open in IMG/M
3300027704\|Ga0209816_1246686	Not Available	565	Open in IMG/M
3300027788\|Ga0209711_10089135	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	1585	Open in IMG/M
3300027838\|Ga0209089_10559842	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	608	Open in IMG/M
3300028192\|Ga0257107_1100976	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	861	Open in IMG/M
3300031142\|Ga0308022_1099858	Not Available	867	Open in IMG/M
3300031510\|Ga0308010_1227458	Not Available	664	Open in IMG/M
3300031519\|Ga0307488_10316279	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium TMED56	998	Open in IMG/M
3300031594\|Ga0302131_1031646	All Organisms → cellular organisms → Bacteria	2100	Open in IMG/M
3300031626\|Ga0302121_10205564	Not Available	558	Open in IMG/M
3300031644\|Ga0308001_10180098	Not Available	850	Open in IMG/M
3300031773\|Ga0315332_10384481	Not Available	898	Open in IMG/M
3300031801\|Ga0310121_10411814	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	765	Open in IMG/M
3300031803\|Ga0310120_10372125	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	738	Open in IMG/M
3300031811\|Ga0310125_10345667	Not Available	731	Open in IMG/M
3300032011\|Ga0315316_11542988	Not Available	521	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	100.00%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	92.86%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	4.46%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Oceanic	Environmental → Aquatic → Marine → Oceanic	30.36%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	23.21%
Coastal	Environmental → Aquatic → Marine → Coastal	20.54%
Unclassified	Environmental → Aquatic → Marine → Unclassified	15.18%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	4.46%
River	Environmental → Aquatic → Freshwater → River	1.79%
Pelagic	Environmental → Aquatic → Marine → Pelagic	1.79%
Hydrothermal Vents	Environmental → Aquatic → Marine → Hydrothermal Vents	0.89%
Strait	Environmental → Aquatic → Marine → Strait	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	26.79%
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	20.54%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	16.96%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	15.18%
Unclassified	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified	6.25%
Photic Zone	Environmental → Aquatic → Marine → Oceanic → Photic Zone	3.57%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Pelagic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	1.79%
Epilimnion	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion	1.79%
Diffuse Flow	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow	0.89%
Unclassified	Environmental → Aquatic → Marine → Strait → Unclassified	0.89%
Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	22.32%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	16.96%
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	16.07%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	10.71%
Seawater	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Seawater	4.46%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	3.57%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	3.57%
Marine	Environmental → Aquatic → Marine → Unclassified → Unclassified → Marine	2.68%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Marine	1.79%
Surface Seawater	Environmental → Aquatic → Marine → Oceanic → Photic Zone → Surface Seawater	1.79%
Marine	Environmental → Aquatic → Marine → Intertidal Zone → Unclassified → Marine	1.79%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	1.79%
Pelagic Marine	Environmental → Aquatic → Marine → Pelagic → Unclassified → Pelagic Marine	1.79%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Epilimnion → Saline Water And Sediment	1.79%
Seawater	Environmental → Aquatic → Marine → Oceanic → Unclassified → Seawater	0.89%
Sackhole Brine	Environmental → Aquatic → Marine → Coastal → Unclassified → Sackhole Brine	0.89%
Hydrothermal Vent Fluids	Environmental → Aquatic → Marine → Hydrothermal Vents → Diffuse Flow → Hydrothermal Vent Fluids	0.89%
Seawater	Environmental → Aquatic → Marine → Strait → Unclassified → Seawater	0.89%
Saline Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Saline Water	0.89%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	0.89%
Saline Water And Sediment	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Sediment → Saline Water And Sediment	0.89%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001419	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline water (15 m)	Environmental	Open in IMG/M
3300001460	Marine viral communities from the Pacific Ocean - LP-28	Environmental	Open in IMG/M
3300001472	Marine viral communities from the Pacific Ocean - LP-32	Environmental	Open in IMG/M
3300001589	Marine viral communities from the Pacific Ocean - LP-40	Environmental	Open in IMG/M
3300001948	Marine microbial communities from Chesapeake Bay, Maryland, USA - GS012	Environmental	Open in IMG/M
3300001974	Marine microbial communities from Upwelling, Fernandina Island, Equador - GS031	Environmental	Open in IMG/M
3300005402	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV73	Environmental	Open in IMG/M
3300005512	Saline surface water microbial communities from Etoliko Lagoon, Greece - halocline_water	Environmental	Open in IMG/M
3300005599	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201302PF91A	Environmental	Open in IMG/M
3300006002	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006193	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG029-DNA	Environmental	Open in IMG/M
3300006339	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT232_3_0500m	Environmental	Open in IMG/M
3300006414	Marine microbial communities from North Pacific Subtropical Gyre, Station ALOHA - HOT225_1_0500m	Environmental	Open in IMG/M
3300006750	Marine viral communities from the Subarctic Pacific Ocean - 19_ETSP_OMZ_AT15317 metaG	Environmental	Open in IMG/M
3300006802	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18	Environmental	Open in IMG/M
3300006867	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_<0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006902	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S15_td_250_ad_251m_LV_A	Environmental	Open in IMG/M
3300006919	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Mar_21	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300008050	Marine viral communities from the Subarctic Pacific Ocean - 15_ETSP_OMZ_AT15312 metaG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300009173	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB4_134	Environmental	Open in IMG/M
3300009420	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_152	Environmental	Open in IMG/M
3300009786	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB8_126	Environmental	Open in IMG/M
3300010153	Marine viral communities from the Subarctic Pacific Ocean - 20_ETSP_OMZ_AT15318 metaG	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010368	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_15_0.2_DNA	Environmental	Open in IMG/M
3300012920	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St8 metaG	Environmental	Open in IMG/M
3300012954	Marine microbial communities from the Costa Rica Dome - CRUD Field 142mm St18 metaG	Environmental	Open in IMG/M
3300013010	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Spr_31_0.8_DNA	Environmental	Open in IMG/M
3300016771	Metatranscriptome of coastal salt marsh microbial communities from the Groves Creek Marsh, Georgia, USA - 071412BT metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017719	Marine viral communities from the oligotrophic San Pedro Time Series (SPOT) site, San Pedro Channel, CA, USA ? 13 SPOT_SRF_2010-07-21	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017968	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071409AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018413	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011509CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018424	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018426	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300019751	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW18Oct16_MG	Environmental	Open in IMG/M
3300019756	Freshwater microbial communities from the Broadkill River, Lewes, Delaware, United States ? IW6Sep16_MG	Environmental	Open in IMG/M
3300020056	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101410AT metaG (spades assembly)	Environmental	Open in IMG/M
3300020280	Marine microbial communities from Tara Oceans - TARA_B100001121 (ERX556044-ERR599114)	Environmental	Open in IMG/M
3300020303	Marine microbial communities from Tara Oceans - TARA_B100000745 (ERX556095-ERR599124)	Environmental	Open in IMG/M
3300020326	Marine microbial communities from Tara Oceans - TARA_B100002003 (ERX556099-ERR599004)	Environmental	Open in IMG/M
3300020337	Marine microbial communities from Tara Oceans - TARA_E500000075 (ERX289009-ERR315861)	Environmental	Open in IMG/M
3300020378	Marine microbial communities from Tara Oceans - TARA_B100000066 (ERX556006-ERR599102)	Environmental	Open in IMG/M
3300020379	Marine microbial communities from Tara Oceans - TARA_B100000902 (ERX556001-ERR599168)	Environmental	Open in IMG/M
3300020389	Marine microbial communities from Tara Oceans - TARA_B100000809 (ERX556139-ERR599008)	Environmental	Open in IMG/M
3300020420	Marine microbial communities from Tara Oceans - TARA_B100001248 (ERX556094-ERR599142)	Environmental	Open in IMG/M
3300020469	Marine microbial communities from Tara Oceans - TARA_B100001093 (ERX555967-ERR599052)	Environmental	Open in IMG/M
3300021084	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 80m 12015	Environmental	Open in IMG/M
3300021352	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 150m 12015	Environmental	Open in IMG/M
3300021442	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M2 200m 12015	Environmental	Open in IMG/M
3300021791	Hydrothermal fluids microbial communities from Mariana Back-Arc Basin vent fields, Pacific Ocean - Daikoku_FS921 150_kmer	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022909	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 011501BT metaG	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300023084	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG	Environmental	Open in IMG/M
3300023170	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071407BT metaG	Environmental	Open in IMG/M
3300023173	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071413AT metaG	Environmental	Open in IMG/M
3300023175	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 101402AT metaG	Environmental	Open in IMG/M
3300023180	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412AT metaG	Environmental	Open in IMG/M
3300023235	Saline water microbial communities from Ace Lake, Antarctica - #50	Environmental	Open in IMG/M
3300025137	Marine viral communities from the Pacific Ocean - LP-32 (SPAdes)	Environmental	Open in IMG/M
3300025138	Marine viral communities from the Pacific Ocean - LP-40 (SPAdes)	Environmental	Open in IMG/M
3300025141	Marine viral communities from the Pacific Ocean - ETNP_6_85 (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025687	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025712	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110321 (SPAdes)	Environmental	Open in IMG/M
3300025803	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Fall_30_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025809	Pelagic marine microbial communities from North Sea - COGITO_mtgs_110523 (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025889	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_18 (SPAdes)	Environmental	Open in IMG/M
3300026087	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S7_td_NADW_ad_2505m_LV_A (SPAdes)	Environmental	Open in IMG/M
3300026211	Marine microbial and viral communities from oxygen minimum zone, Eastern Pacific Ocean - ETNP201406SV199 (SPAdes)	Environmental	Open in IMG/M
3300027522	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG058-DNA (SPAdes)	Environmental	Open in IMG/M
3300027704	Marine microbial communities from the West Antarctic Peninsula - Coastal water metaG017-DNA (SPAdes)	Environmental	Open in IMG/M
3300027788	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB11_88 (SPAdes)	Environmental	Open in IMG/M
3300027838	Marine microbial communities from western Arctic Ocean - ArcticOcean_MG_CB2_150 (SPAdes)	Environmental	Open in IMG/M
3300028192	Marine microbial communities from Northeast Subartic Pacific Ocean, Canada - LP_J_2011_P26_500m	Environmental	Open in IMG/M
3300031142	Marine microbial communities from water near the shore, Antarctic Ocean - #353	Environmental	Open in IMG/M
3300031510	Marine microbial communities from water near the shore, Antarctic Ocean - #129	Environmental	Open in IMG/M
3300031519	Sea-ice brine microbial communities from Beaufort Sea near Barrow, Alaska, United States - SB 0.2	Environmental	Open in IMG/M
3300031594	Marine microbial communities from Western Arctic Ocean, Canada - CB9_20m	Environmental	Open in IMG/M
3300031626	Marine microbial communities from Western Arctic Ocean, Canada - CB21_surface	Environmental	Open in IMG/M
3300031644	Marine microbial communities from water near the shore, Antarctic Ocean - #5	Environmental	Open in IMG/M
3300031773	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 100m 34915	Environmental	Open in IMG/M
3300031801	Marine microbial communities from Western Arctic Ocean, Canada - CB27_Tmax_986	Environmental	Open in IMG/M
3300031803	Marine microbial communities from Western Arctic Ocean, Canada - CB27_AW_983	Environmental	Open in IMG/M
3300031811	Marine microbial communities from Western Arctic Ocean, Canada - CB11b_Tmax_Bot8	Environmental	Open in IMG/M
3300032011	Ammonia-oxidizing marine archaeal communities from Monterey Bay, California, United States - M1 60m 3416	Environmental	Open in IMG/M
3300032278	Marine microbial communities from station ALOHA, North Pacific Subtropical Gyre - HC15-DNA-20-500_MG	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI11705J14877_101364641	3300001419	Saline Water And Sediment	MNWEKLKPNHFYKDPIYIYSSTLFDTKEYDVLYENQNNLSHHSWQDFDKKYRTGFEFKNSIDDVDM
JGI24003J15210_100770642	3300001460	Marine	MNWLKLKKQHYFKEPVEFIYTSELFDRLEYDALYENQNDLSHKVWQEFDEKYKVP
JGI24004J15324_100974761	3300001472	Marine	MNWGKLKPHHYHKEPVEYIYARTLFDLKEYDNLYENQNNLMHEVWKDFDEKYR
JGI24005J15628_100149341	3300001589	Marine	MNWGKLKPHHYHKEPVEYIYARTLFDLKEYDKLYENQNNLMHEVWKDFDEK
GOS2228_10145581	3300001948	Marine	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQIWKDFDEKYK
GOS2246_101791544	3300001974	Marine	MNWERIKKFYYYKEPTEHILAPDIIDIKEYDILYENQNNISHQVWQDFDT
Ga0066855_101460321	3300005402	Marine	MNWKKLRKPHYHKEPVEYIYATAIFDLKEYDSLYENQNDLSHQVWQNFDAKYRVGYEFLD
Ga0074648_10255554	3300005512	Saline Water And Sediment	MNWEKIKPNHFFKEPVEHVYASTLYDIKDYDKLYENQNNFTHTVWQEFDRN*
Ga0074648_10947051	3300005512	Saline Water And Sediment	MNWEKIKPNHYFKEPVEHVYASTLFDIKDYDKLYENQNNLTHPAWQEFDRKYKVGLQFH
Ga0066841_100538031	3300005599	Marine	MNWEKIKKSYYYKEPAEHILAPNIIDAKEYDILYENQNNLSHQVWQDFDTKYKIGFEFFKDLREFNKN
Ga0066368_101288111	3300006002	Marine	MNWEKIKKSHYYKEPVEHILAPAIFDLKEYDNLYENQNNLSHQVWQDFDTKHKIGFEFFKDLREFNKNKEVICL
Ga0075474_102115262	3300006025	Aqueous	MIWNKIKPNHYFEDPIEHIYAMTIFDTKEYDKLYENQNDLNHNVWQEFDSKY
Ga0075478_101644822	3300006026	Aqueous	MNWEKLKTNHFFKEPIEHVYTSTVYDIKDYDKLYENQNNLTHQVWQSFDKKYKTGFQLFNDIR
Ga0075445_102866552	3300006193	Marine	MNWGKLKPHHYHKEPAEYIYARTIFDLKEYDNLYENQNNLMHEVW
Ga0068481_12360831	3300006339	Marine	MNWLEIKKSHYHKEPVEHILAPAIFNLKEYDILYENQNNLSHQVWQ
Ga0099957_10715532	3300006414	Marine	MNWEKLRKLHYYKEPVEYIYATDIIGVKEYDNLYENQNNLSHQVWQ
Ga0098058_11736092	3300006750	Marine	MNWEKLRKPHYHKEPVEYIYATGIFNLKEYDKLYENQNNLSHQIWQDFDTKYKIGFEFFK
Ga0070749_103835992	3300006802	Aqueous	MNWDKLKINHYFKEPVEYIYSSTIFNIKEYDKLYENQNNLSHQVWKDFDSKYSAGFQFYEDLTEINKNKEVMCLWFYKDRNDRS
Ga0075476_102609731	3300006867	Aqueous	MNWDKLKINHYFKEPVEYIYSSTIFNIKEYDKLYENQNNLSHQVWKDFDSKY
Ga0075476_103614491	3300006867	Aqueous	MNWEKLKPNHFFKQPVEHVYASTLYDIADYDKLYENTGDLQHTTWQEFDKKYRTGFQL
Ga0075479_103838912	3300006870	Aqueous	MNWEKIKPNHFFKEPVEHVYASTLYDIKDYDKLYENQNNFTHTVWQDFDRKYKVGFQFHDDIREINTNK
Ga0066372_107617231	3300006902	Marine	MNWEKLKKPHYFEEPVEHILATAIFSLKNYDSLYENQNNLSHQVWQEF
Ga0070746_100968751	3300006919	Aqueous	MNWGKLKASHYFSTRVEHIYTSTIFDQKIYDKLYENQNNLNHKVWQDF
Ga0099850_10614974	3300007960	Aqueous	MNWEKLKPQHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQVWKDFDEKYKT
Ga0099850_11158553	3300007960	Aqueous	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQVWKDFDEKYKT
Ga0099850_11941052	3300007960	Aqueous	MNWEKIKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHPAWQEFDSKYKVGFQFH
Ga0098052_12294691	3300008050	Marine	MNWEKIKKSYYYKEPVEHILAPDIIDTKEYDTLYENQNNLSHQVWQDFDTQYKTGFEFFKNLHEFNKNKEV
Ga0102963_11571862	3300009001	Pond Water	MNWEKIKPSHFFKEPVEHVYASTLYDIKDYDKLYENQNNFTHTVWQEF*
Ga0118687_103988542	3300009124	Sediment	MNWEKIKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHPAWQEFDRKYKVGF
Ga0114996_102186314	3300009173	Marine	MNWKKLRKPHYHKDPVEYIYATAIFDLREYDSLYENQNNLSHQVWQ
Ga0114994_103187123	3300009420	Marine	MNWEKLKPHHYHKEPVEYIYARTLFDLKEYDNLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKDKD
Ga0114994_105624682	3300009420	Marine	MNWGKLKPHHYHKEPVEYIYARSIFDLKEYDKLYENQNNLIHEVWKDFYGKYRVGFKFLEDIRDINKNKDITCKVSTSY*
Ga0114999_111138442	3300009786	Marine	MNWKKLRKPHYHKDPVEYIYATAIFDLKEYDSLYENQNDLSHQIWQDFDA
Ga0114999_112772692	3300009786	Marine	MNWEKLKPQHYHKEPVEYIYARSIFELKEYDKLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKDKDIMC
Ga0114999_113316141	3300009786	Marine	MNWGKLKPHHYHKEPVEYIYARTLFDLKEYDNLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKDKDIMC
Ga0098059_12474722	3300010153	Marine	MNWKKLRKPNYHKEPVEYIRAQGLVNIQEYDSLYENQNNLSHQVWQEFNAKYKVGYEFLQDIRDLNLDK
Ga0129348_10716973	3300010296	Freshwater To Marine Saline Gradient	MIWNKIKPNHYFEDPIEHIYAMTIFDTKEYDKLYENQNDLNHNVWQEFDSKYR
Ga0129342_11957481	3300010299	Freshwater To Marine Saline Gradient	MNWEKLKPNHFFKQPVEHVYASTLYDIADYDKLYENTGDLQHTTWQEFDKKYKTGFQLFDDIRDIDTKR
Ga0129324_101946702	3300010368	Freshwater To Marine Saline Gradient	MNWEKLKPQHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQVWKDFDEK
Ga0160423_110896321	3300012920	Surface Seawater	MHWDKLKPNHYFTDPVAHIYTHTIYDSREYDKLYENQNNLNHKVWQDFDAKYKVGYEFKEDFSTLDYEKEVMC
Ga0163111_107758151	3300012954	Surface Seawater	MNWEKLKPVHYFKEPVEYFYASSIFDTKEYDALYENQNNFNHKTWLD
Ga0129327_105697331	3300013010	Freshwater To Marine Saline Gradient	MNWEKLKKQHYFKEPVEYIYSSTIFDIKEYDKLYENQNNLSHQAWKNFDAKYKTG
Ga0182082_15324983	3300016771	Salt Marsh	MNWEKLKPNHFFKNPVPYVYASTLVDTVEYDKLYENQNNLTHRVWQDFDKKYKTGFQFYN
Ga0181390_11396402	3300017719	Seawater	MNWDKLKPNHYFRDPITHIYAQDIFNTKEYDKLYENQNNFDHKTWQEFDTLYRIGFEFKDDFSE
Ga0181580_100151699	3300017956	Salt Marsh	MNWEKIKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHPAWQEFD
Ga0181580_103741822	3300017956	Salt Marsh	MNWEKIKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHPAWQEFDRKYKVGFQFHNDIREINTNK
Ga0181587_109174552	3300017968	Salt Marsh	MNWEKLKANHYFKDPVEHVHASTLYDMKEYDKLYENQNNLNHHVWQEFDQK
Ga0181560_103963771	3300018413	Salt Marsh	MNWEKLKANHYFKDPVEYVHASTLYDMKEYDKLYENQNNLNHHV
Ga0181591_101876274	3300018424	Salt Marsh	MNWEKLKTNHYFKDPVEHIYASILYDMKEYDKLYENQNNLNHHVWQEFDQKYKTGFEFINDIG
Ga0181591_103962373	3300018424	Salt Marsh	MNWEKLKTNHYFKDPVEHVYASTLYDMKEYDKLYENQNNLNHHVWQEFDQKYKTGFEFINDIG
Ga0181591_106247891	3300018424	Salt Marsh	MNWEKLKTSHYFSTPVEHIYTSTIFDQKIYDKLYENQNNLNHKVWQDFTSEYK
Ga0181591_106331732	3300018424	Salt Marsh	MNWEKLKPNHYFREPVEYIYSSTIFDIKEYDKLYENQNNLNHKVWQDFDKKYKIGFQFLDDI
Ga0181591_111584511	3300018424	Salt Marsh	MNWEKLKANHFFKEPVEHVYTSTVYDIKDYDKLYENQNNLTHQVWQEFDKKYKTGFQL
Ga0181566_112072191	3300018426	Salt Marsh	MNWEKLKPNHFFKNPVPYVYASTLVDTVEYDKLYENQNNLTHRVWQDFDKKYKTGFQF
Ga0194029_10635961	3300019751	Freshwater	MNWEKLKPNHYFREPVEYIYSSTIFDLKEYDKLYENQNNLNHKVWQD
Ga0194023_11186962	3300019756	Freshwater	MNWEKLKPNHYFREPVEYIYSSTIFDLKEYDKLYENQNNLNHKVWQDFDKKYKIGFQ
Ga0181574_105090532	3300020056	Salt Marsh	MDWNKLKKTHFFGDPVEYIYSTTLFDINEYDKLYENQNNLDHKVWQDFDQKYCT
Ga0211591_11197251	3300020280	Marine	MHWEKLKKIHYHKDEVEYITSSSIFDIQEYNKLYENSNNLEHQVWQDFDKKYKIGYEFKQ
Ga0211692_10416901	3300020303	Marine	MNWKKLRKPHYHKEPVEYIYATAIFDLKEYDSLYENQNDLSHQVWQNFDTKYKTGFEFLG
Ga0211561_10588492	3300020326	Marine	MNWEKLRKPHYHKEPVEYIYATGIFNLKEYDKLYENQNNLSHQIWQDFD
Ga0211508_10211473	3300020337	Marine	MNWDKLKPNHYFEDPVQHIYTQSIFDTKQYDMLYENQNNLQHRHWQDFNAKYGITY
Ga0211527_101470242	3300020378	Marine	MNWEKLQQKNYHTDPVEHIYSMSTFDTKEYDILYENQNNLDHKCWQDFDSKYKIGFEFKEDFT
Ga0211652_102000231	3300020379	Marine	MNWDKLKPNHYFRDPITHIYAQDIFDTKEYDKLYENQNNFDHKTWQEFDTLYRI
Ga0211680_103295912	3300020389	Marine	MNWEKIKKSYYYKEPVEHILAPAIFDLKEYDILYENQNNLSHQVWQDFDIKYKKGFEFFKDLREFNKDKEVICLW
Ga0211580_101737912	3300020420	Marine	MNWNKLKIQHYKKEPVDYIYSSTIFDAKEHDKLYENQMDLNHQVWKEFHKTYKRRRSRPKYCSS
Ga0211577_107296301	3300020469	Marine	MNWDKLKPNHYFRDPITHIYAQDIFDTKEYDKLYENQNNFDHKTWQEFDTLYRIGFEFKDDFSE
Ga0206678_102136461	3300021084	Seawater	MNWEKIKKSYYYKEPVEHILAPAIFDLKEYDILYENQNNLSHQVWQDFDIKYKKGFEFFKDLREFNKNKEV
Ga0206680_101015031	3300021352	Seawater	MNWEKIKKSYYYKEPIEHILAPAIFDLKEYDILYENQNNLSHQVWQDFDTKYKIGFEFFKDLREFNK
Ga0206685_101207681	3300021442	Seawater	MNWKKLRKPHYHKEPVEYIYATAIFDLKEYDSLYENQNDLSHQVWQDFDAKYK
Ga0226832_103223662	3300021791	Hydrothermal Vent Fluids	MNWEKLKKPHYFEEPVEHILATAIFSLKNYDSLYENQNNLSHQVWQEFDAKYKVGYEFLRDIKDLNLIPY
Ga0222718_106068171	3300021958	Estuarine Water	MFWHKLKKNHYYIQPVEHVYSSSIFDTKEYDVLYENQNNLSHKVWKEFDEKHKTG
Ga0222719_108160361	3300021964	Estuarine Water	MMIWEKLKPNHYFKDPVEHIYTITTFDTKEYDKLYENQNNLDHSVWQDFDSKYKTGYEFKEDFSQVDF
Ga0196905_11729711	3300022198	Aqueous	MNWEKLKVNHVFENPVKHIYASTLFDIKEYDKLYENTNNLRHAVWQEFDKKYKIGFQ
Ga0196901_12056591	3300022200	Aqueous	MNWEKLKVNHVFENPVKHIYASTLFDIKEYDKLYENTNNLRHAVWQEFDKKYKIGFQLYDDIR
Ga0196901_12777951	3300022200	Aqueous	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQIWKDFDEKYKTGFQFCDDLRDI
Ga0255755_11466411	3300022909	Salt Marsh	MNWEKLKPNHFFKNPVPYVYASTLVDTVEYDKLYENQNNLTHRVWQDFD
Ga0255780_101641733	3300022935	Salt Marsh	MNWEKIKPNHFFKEPVEHVYASTIYDIKDYDKLYENQNNFTHTVWQEFDRKYKVGFQFHDDIREI
Ga0255778_100892874	3300023084	Salt Marsh	MNWEKLKANHFFKEPVEHIYTSTVYDIKDYDKLYENQNFLSHQVWQEFDEKYKTGFQLCDDIRDIDI
Ga0255761_104687131	3300023170	Salt Marsh	MNWEKLKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHTVWQEFDRKY
Ga0255776_100434781	3300023173	Salt Marsh	MNWEKLKANHFFKEPVEHVYTSTVYDIKDYDKLYENQNNLTHQVWQEFDQKYKTGFQLCDDIRDIDTN
Ga0255777_106144422	3300023175	Salt Marsh	MNWEKLKPNHFFKNPVPYVYASTLVDTVEYDKLYENQNNLTHRVWQDFDK
Ga0255768_102107873	3300023180	Salt Marsh	MNWEKLKTNHYFKDPVEHVYASTLYDMKEYDKLYENQNNLNHHVWQEFDQKYKTGF
Ga0222634_10569741	3300023235	Saline Water	MNWEKLKQNHYNKDPVEHIYSKTIFDMKEYDDLYENQNNLSHKVWKNLSEKYGIE
Ga0209336_100919812	3300025137	Marine	MNWEKLKPNHYFEDPVAHIYTRTVFDKVEYDKLYENQNNLNHKTWQDFDSKYSLRFEFKDDFSKIDFN
Ga0209634_10216401	3300025138	Marine	MNWEKLKPQHYHKEPVEYIYARSIFELKEYDKLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKDKDIMCL
Ga0209756_10290967	3300025141	Marine	MNWEKLRKPHYHKEPVEYIYATGIFNLKEYDKLYENQNNLSHQIWQDFDTKYKIGFEFFKDLREFNKNK
Ga0208162_11312521	3300025674	Aqueous	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQIWKDFD
Ga0208019_10451331	3300025687	Aqueous	MNWEKLKPNHYFKEPVEHIYSSTIFDIKEYDKLYENQNNFSHQVWKDFDE
Ga0209305_10327444	3300025712	Pelagic Marine	MNWEKLKPHHYHKEPVEHIYSKTIFDMKEYDNLYENQNNMSHKVWKNLSEKYSIEFKFLKDIR
Ga0208425_10617801	3300025803	Aqueous	MNWEKIKPNHYFKEPVEHVYASTLYDIKDYDKLYENQNNFTHPAWQEFDRKYKVGFQFHNDIREINTKK
Ga0209199_10172798	3300025809	Pelagic Marine	MNWEKLKPHHYHKEPVEHIYSKTIFDMKEYDDLYENQNNMSHKVWKNL
Ga0208785_10637463	3300025815	Aqueous	MNWEKLKKQHYFKEPVEYIYSSTIFDIKEYDKLYENQNNLSHQAWKKFDAKYKTGF
Ga0208644_12397512	3300025889	Aqueous	MNWDKLKINHYFKEPVEYIYSSTIFNIKEYDKLYENQNNLSHQVWKDFDSKYSAGFQFYEDLTEINKNKEVM
Ga0208113_10368021	3300026087	Marine	MNWEKIKKSHYYKEPVEHILAPAIFDLKEYDNLYENQNNLSHQVWQDFDTKHKIGFEFFKDLREFNKNKEVICLCFF
Ga0208132_10433442	3300026211	Marine	MNWEKLRKPHYHKEPVEYIYATGIFNLKEYDILYENQNNLSHQVWQDFDTKHKIGFEFFKDLREFNKNKEVIC
Ga0209384_10328033	3300027522	Marine	MNWEKLKPQHYHKEPVEYIYARSIFELKEYDKLYENQNNLMHEVWKNFYGTYRVGFELIDDIRDINKDKDIICLWF
Ga0209816_12466861	3300027704	Marine	MNWGKLKPHHYHKEPAEYIYARTIFDLKEYDNLYENQNNLMHEVWKDFYEKYRVGFEFLDDIRDINKD
Ga0209711_100891353	3300027788	Marine	MNWGKLKPHHYHKEPVEYIYARSIFELKEYDNLYENQNNLMHEVWKDFD
Ga0209089_105598422	3300027838	Marine	MNWEKLKPHHYHKEPVEHIYSKTIFDMKEYDNLYENQNNMSHKVWKNLSEKYSIEFKFLKDIRDFDKDKDVICLWF
Ga0257107_11009761	3300028192	Marine	MNWKKLRKPHYHKEPVEFIYATAIFDLKEYDSLYENQNDLSHQIWQNFDAKYRVG
Ga0308022_10998581	3300031142	Marine	MNWEKLKQNHHNKDPVEYIYSKTIFDMKEYDDLYENQNNLSHKVWKNLSEKYGIEFNFLKDIRDFDKDK
Ga0308010_12274581	3300031510	Marine	MNWEKLKQNHHNKDPVEYIYSKTIFDMKEYDDLYENQNNLSHKVWKNLS
Ga0307488_103162791	3300031519	Sackhole Brine	MNWGKLKPHHYHKEPVEYIYARTLFDLKEYDNLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKDKDIMCL
Ga0302131_10316464	3300031594	Marine	MNWEKLKPHHYHKEPAEYIYARTIFDLKEYDNLYENQNNLMHEVWKDFYEKYRVG
Ga0302121_102055641	3300031626	Marine	MNWGKLKPHHYHKEPVEYIYARSIFELKEYDNLYENQNNLMHEVWKDFDEKYRVGFEFLDDIRDINKD
Ga0308001_101800981	3300031644	Marine	MNWEKLKPQHYHKEPVEYIYARSIFDLKEYDKLYENQNNLMHAVWKDFDEKYCIGFEF
Ga0315332_103844811	3300031773	Seawater	MNWQKLRKPHYHKEPVEYIYATAIFDLKEYDSLYENQNDLSHQVWQNFDTKYKM
Ga0310121_104118142	3300031801	Marine	MNWEKIKKSYYYKEPVEHILAPAIFNLDEYDSLYRNQNDLSHQVWQDFDIKYKKGFEFFKDLREFNKDKEVICLWFF
Ga0310120_103721251	3300031803	Marine	MNWLEIKKSHYHKEPVEHILAPAIFNLKEYDILYENQNNLSHQVWQDFDTKYKIGFEFFKDL
Ga0310125_103456671	3300031811	Marine	MNWEKIKKSYYYKEPVEHILAPAIFDLKEYDILYENQNNLSHQVWQDFDIKYKKGFEF
Ga0315316_115429881	3300032011	Seawater	MNWKKLRKPHYHKEPVEYIYATAIFDLKEYDSLYENQNDLSHQVWQEFDAKYK
Ga0310345_103852623	3300032278	Seawater	VPNLFAKLKKTHLYQDPIEHIYASNIFDIKEYDKLYENQNNPNHKVWKDFQTT

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084449

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences