NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome Family F084429

Metagenome Family F084429

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F084429
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 57 residues
Representative Sequence MMTPMEFSTPLISASVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Number of Associated Samples 89
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 48.11 %
% of genes near scaffold ends (potentially truncated) 48.21 %
% of genes from short scaffolds (< 2000 bps) 66.07 %
Associated GOLD sequencing projects 78
AlphaFold2 3D model prediction Yes
3D model pTM-score0.45

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (61.607 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere
(20.536 % of family members)
Environment Ontology (ENVO) Unclassified
(35.714 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(60.714 % of family members)


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Multiple Sequence Alignments

Select alignment to view:      

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 43.21%    β-sheet: 0.00%    Coil/Unstructured: 56.79%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.45
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF11794HpaB_N 8.93
PF01546Peptidase_M20 4.46
PF00375SDF 4.46
PF02566OsmC 4.46
PF13207AAA_17 3.57
PF13620CarboxypepD_reg 3.57
PF07228SpoIIE 2.68
PF07687M20_dimer 2.68
PF00472RF-1 1.79
PF07676PD40 1.79
PF00069Pkinase 1.79
PF06452CBM9_1 1.79
PF01841Transglut_core 1.79
PF07586HXXSHH 1.79
PF08818DUF1801 0.89
PF01346FKBP_N 0.89
PF07238PilZ 0.89
PF12543DUF3738 0.89
PF00593TonB_dep_Rec 0.89
PF13649Methyltransf_25 0.89
PF00753Lactamase_B 0.89
PF09537DUF2383 0.89
PF04998RNA_pol_Rpb1_5 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG0515Serine/threonine protein kinaseSignal transduction mechanisms [T] 7.14
COG1764Organic hydroperoxide reductase OsmC/OhrADefense mechanisms [V] 4.46
COG1765Uncharacterized OsmC-related proteinGeneral function prediction only [R] 4.46
COG1186Protein chain release factor PrfBTranslation, ribosomal structure and biogenesis [J] 1.79
COG0216Protein chain release factor RF1Translation, ribosomal structure and biogenesis [J] 1.79
COG0545FKBP-type peptidyl-prolyl cis-trans isomerasePosttranslational modification, protein turnover, chaperones [O] 0.89
COG4430Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 familyFunction unknown [S] 0.89
COG5646Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)Posttranslational modification, protein turnover, chaperones [O] 0.89
COG5649Uncharacterized conserved protein, DUF1801 domainFunction unknown [S] 0.89
COG0086DNA-directed RNA polymerase, beta' subunit/160 kD subunitTranscription [K] 0.89

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms61.61 %
UnclassifiedrootN/A38.39 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000890|JGI11643J12802_11604013All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium1298Open in IMG/M
3300000891|JGI10214J12806_10093844Not Available1333Open in IMG/M
3300001977|JGI24746J21847_1054762All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium565Open in IMG/M
3300004156|Ga0062589_102171348Not Available568Open in IMG/M
3300004480|Ga0062592_100775924All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium846Open in IMG/M
3300005328|Ga0070676_10088305All Organisms → cellular organisms → Bacteria1894Open in IMG/M
3300005328|Ga0070676_10142645All Organisms → cellular organisms → Bacteria1526Open in IMG/M
3300005328|Ga0070676_10370052All Organisms → cellular organisms → Bacteria990Open in IMG/M
3300005331|Ga0070670_100072462All Organisms → cellular organisms → Bacteria → Proteobacteria2958Open in IMG/M
3300005333|Ga0070677_10003728All Organisms → cellular organisms → Bacteria4932Open in IMG/M
3300005333|Ga0070677_10148123All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1089Open in IMG/M
3300005340|Ga0070689_101665291Not Available580Open in IMG/M
3300005343|Ga0070687_100013480All Organisms → cellular organisms → Bacteria3646Open in IMG/M
3300005347|Ga0070668_100863728All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium807Open in IMG/M
3300005353|Ga0070669_100711418Not Available849Open in IMG/M
3300005353|Ga0070669_101090618Not Available687Open in IMG/M
3300005364|Ga0070673_100020384All Organisms → cellular organisms → Bacteria → Proteobacteria4782Open in IMG/M
3300005438|Ga0070701_10641371Not Available708Open in IMG/M
3300005456|Ga0070678_100245232All Organisms → cellular organisms → Bacteria1500Open in IMG/M
3300005456|Ga0070678_100521151All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1052Open in IMG/M
3300005564|Ga0070664_102093159All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium537Open in IMG/M
3300005719|Ga0068861_100031523All Organisms → cellular organisms → Bacteria → Proteobacteria3895Open in IMG/M
3300006196|Ga0075422_10119797Not Available1027Open in IMG/M
3300006358|Ga0068871_100300853All Organisms → cellular organisms → Bacteria → Proteobacteria1408Open in IMG/M
3300006844|Ga0075428_100910915All Organisms → cellular organisms → Bacteria932Open in IMG/M
3300006844|Ga0075428_101047810Not Available863Open in IMG/M
3300006845|Ga0075421_100112227All Organisms → cellular organisms → Bacteria3426Open in IMG/M
3300006845|Ga0075421_100315344All Organisms → cellular organisms → Bacteria → Acidobacteria1897Open in IMG/M
3300006846|Ga0075430_100237423All Organisms → cellular organisms → Bacteria1511Open in IMG/M
3300006853|Ga0075420_101620201All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium554Open in IMG/M
3300006871|Ga0075434_100172479All Organisms → cellular organisms → Bacteria2183Open in IMG/M
3300006871|Ga0075434_101132943All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium795Open in IMG/M
3300006969|Ga0075419_10311915All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1062Open in IMG/M
3300007004|Ga0079218_10119210All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1859Open in IMG/M
3300009094|Ga0111539_10021528All Organisms → cellular organisms → Bacteria7933Open in IMG/M
3300009094|Ga0111539_10145491All Organisms → cellular organisms → Bacteria → Proteobacteria2775Open in IMG/M
3300009100|Ga0075418_10947085All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium931Open in IMG/M
3300009147|Ga0114129_10153584All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3150Open in IMG/M
3300009147|Ga0114129_10155467All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3128Open in IMG/M
3300009156|Ga0111538_10200727All Organisms → cellular organisms → Bacteria → Acidobacteria2530Open in IMG/M
3300009156|Ga0111538_13427839Not Available551Open in IMG/M
3300009177|Ga0105248_10864838Not Available1021Open in IMG/M
3300010046|Ga0126384_11537167Not Available625Open in IMG/M
3300010047|Ga0126382_10149387Not Available1597Open in IMG/M
3300010362|Ga0126377_12924993Not Available551Open in IMG/M
3300012896|Ga0157303_10304664Not Available510Open in IMG/M
3300012897|Ga0157285_10025928All Organisms → cellular organisms → Bacteria1285Open in IMG/M
3300012901|Ga0157288_10242956Not Available600Open in IMG/M
3300012911|Ga0157301_10049186Not Available1080Open in IMG/M
3300012915|Ga0157302_10380287Not Available576Open in IMG/M
3300012943|Ga0164241_10408688Not Available974Open in IMG/M
3300013096|Ga0157307_1008179All Organisms → cellular organisms → Bacteria → Proteobacteria1581Open in IMG/M
3300015371|Ga0132258_10695599All Organisms → cellular organisms → Bacteria2559Open in IMG/M
3300015372|Ga0132256_100175195All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium2175Open in IMG/M
3300015373|Ga0132257_100259087All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium2079Open in IMG/M
3300017792|Ga0163161_10056804All Organisms → cellular organisms → Bacteria2843Open in IMG/M
3300018079|Ga0184627_10185079Not Available1102Open in IMG/M
3300018469|Ga0190270_12517062Not Available577Open in IMG/M
3300018476|Ga0190274_11015345Not Available904Open in IMG/M
3300019356|Ga0173481_10068959Not Available1273Open in IMG/M
3300019362|Ga0173479_10216088Not Available820Open in IMG/M
3300022880|Ga0247792_1143311All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium514Open in IMG/M
3300025795|Ga0210114_1076334All Organisms → cellular organisms → Bacteria → Acidobacteria684Open in IMG/M
3300025893|Ga0207682_10006847All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium4573Open in IMG/M
3300025893|Ga0207682_10014851All Organisms → cellular organisms → Bacteria → Proteobacteria3033Open in IMG/M
3300025901|Ga0207688_10060635Not Available2131Open in IMG/M
3300025907|Ga0207645_10008286All Organisms → cellular organisms → Bacteria7264Open in IMG/M
3300025907|Ga0207645_10226208All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300025918|Ga0207662_10025272All Organisms → cellular organisms → Bacteria3421Open in IMG/M
3300025923|Ga0207681_10316299All Organisms → cellular organisms → Bacteria1240Open in IMG/M
3300025923|Ga0207681_10933104Not Available727Open in IMG/M
3300025926|Ga0207659_10071797All Organisms → cellular organisms → Bacteria2529Open in IMG/M
3300025930|Ga0207701_10895886All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium743Open in IMG/M
3300025945|Ga0207679_11902533All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium542Open in IMG/M
3300025960|Ga0207651_10943469Not Available769Open in IMG/M
3300026089|Ga0207648_10177971All Organisms → cellular organisms → Bacteria1882Open in IMG/M
3300026118|Ga0207675_101043750All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium836Open in IMG/M
3300026121|Ga0207683_10090732All Organisms → cellular organisms → Bacteria → Proteobacteria2721Open in IMG/M
3300027907|Ga0207428_10029311All Organisms → cellular organisms → Bacteria4563Open in IMG/M
3300027907|Ga0207428_10511362Not Available871Open in IMG/M
3300027909|Ga0209382_10109859All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium3224Open in IMG/M
3300027909|Ga0209382_10154090Not Available2660Open in IMG/M
3300027909|Ga0209382_10776514All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1022Open in IMG/M
3300027909|Ga0209382_12175961Not Available525Open in IMG/M
3300028381|Ga0268264_10474821All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium1215Open in IMG/M
3300028587|Ga0247828_10981799All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium550Open in IMG/M
3300028889|Ga0247827_10809675All Organisms → cellular organisms → Bacteria621Open in IMG/M
3300031184|Ga0307499_10055887Not Available981Open in IMG/M
(restricted) 3300031248|Ga0255312_1104889Not Available692Open in IMG/M
3300031538|Ga0310888_10116726Not Available1381Open in IMG/M
3300031547|Ga0310887_10551975All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium700Open in IMG/M
3300031716|Ga0310813_10074983All Organisms → cellular organisms → Bacteria2566Open in IMG/M
3300031716|Ga0310813_10100163All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium2251Open in IMG/M
3300031740|Ga0307468_100015690All Organisms → cellular organisms → Bacteria3164Open in IMG/M
3300031892|Ga0310893_10027981Not Available1723Open in IMG/M
3300031913|Ga0310891_10365712Not Available520Open in IMG/M
3300031944|Ga0310884_10037851Not Available2088Open in IMG/M
3300032012|Ga0310902_10034374All Organisms → cellular organisms → Bacteria2363Open in IMG/M
3300032012|Ga0310902_10665309All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium698Open in IMG/M
3300032013|Ga0310906_10187590Not Available1243Open in IMG/M
3300032017|Ga0310899_10125030All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1070Open in IMG/M
3300032075|Ga0310890_10690922All Organisms → cellular organisms → Bacteria798Open in IMG/M
3300032211|Ga0310896_10590714All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium618Open in IMG/M
3300033475|Ga0310811_10107527All Organisms → cellular organisms → Bacteria3600Open in IMG/M
3300034151|Ga0364935_0099895All Organisms → cellular organisms → Bacteria890Open in IMG/M
3300034151|Ga0364935_0170921Not Available693Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere20.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil13.39%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil11.61%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere8.93%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere7.14%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere3.57%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.68%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere2.68%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere2.68%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.79%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
SedimentEnvironmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment1.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.79%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.79%
Natural And Restored WetlandsEnvironmental → Aquatic → Marine → Wetlands → Unclassified → Natural And Restored Wetlands0.89%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Sandy SoilEnvironmental → Terrestrial → Soil → Sand → Unclassified → Sandy Soil0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
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Associated Samples

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000890Soil microbial communities from Great Prairies - Iowa, Continuous Corn soilEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300001977Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M5Host-AssociatedOpen in IMG/M
3300004156Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1EnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005328Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaGHost-AssociatedOpen in IMG/M
3300005331Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaGHost-AssociatedOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005340Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaGEnvironmentalOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005347Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaGHost-AssociatedOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005364Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaGHost-AssociatedOpen in IMG/M
3300005438Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-2 metaGEnvironmentalOpen in IMG/M
3300005456Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaGHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300006196Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1Host-AssociatedOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006845Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006853Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006876Agricultural soil microbial communities from Utah to study Nitrogen management - NC AS200EnvironmentalOpen in IMG/M
3300006969Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3Host-AssociatedOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009100Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2Host-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300010046Tropical forest soil microbial communities from Panama - MetaG Plot_36EnvironmentalOpen in IMG/M
3300010047Tropical forest soil microbial communities from Panama - MetaG Plot_30EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010401Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1EnvironmentalOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012901Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S119-311C-1EnvironmentalOpen in IMG/M
3300012911Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S088-202R-2EnvironmentalOpen in IMG/M
3300012915Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2EnvironmentalOpen in IMG/M
3300012943Backyard soil microbial communities from Emeryville, California, USA - Original compost - Back yard soil (BY)EnvironmentalOpen in IMG/M
3300013096Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2EnvironmentalOpen in IMG/M
3300014326Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300017792Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaGHost-AssociatedOpen in IMG/M
3300018074Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2EnvironmentalOpen in IMG/M
3300018079Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_127_b1EnvironmentalOpen in IMG/M
3300018469Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 TEnvironmentalOpen in IMG/M
3300018476Populus adjacent soil microbial communities from riparian zone of Yellowstone River, Montana, USA - 531 TEnvironmentalOpen in IMG/M
3300019356Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S073-202C-2 (version 2)EnvironmentalOpen in IMG/M
3300019362Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)EnvironmentalOpen in IMG/M
3300022880Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S106-311C-6EnvironmentalOpen in IMG/M
3300025795Wetland microbial communities from San Francisco Bay, California, USA, that impact long-term carbon sequestration - MayberryNW_TuleA_D2 (SPAdes)EnvironmentalOpen in IMG/M
3300025893Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025901Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)Host-AssociatedOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025923Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025926Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025945Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025960Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026121Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300027907Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)Host-AssociatedOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300028381Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028587Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day3EnvironmentalOpen in IMG/M
3300028889Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day2EnvironmentalOpen in IMG/M
3300031184Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_SEnvironmentalOpen in IMG/M
3300031248 (restricted)Sandy soil microbial communities from University of British Columbia, Vancouver, Canada - EtOH5_T0_E5EnvironmentalOpen in IMG/M
3300031538Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1EnvironmentalOpen in IMG/M
3300031547Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D4EnvironmentalOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031892Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D2EnvironmentalOpen in IMG/M
3300031913Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4EnvironmentalOpen in IMG/M
3300031944Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D1EnvironmentalOpen in IMG/M
3300032012Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3EnvironmentalOpen in IMG/M
3300032013Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D3EnvironmentalOpen in IMG/M
3300032017Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4EnvironmentalOpen in IMG/M
3300032075Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3EnvironmentalOpen in IMG/M
3300032211Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1EnvironmentalOpen in IMG/M
3300033475Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YCEnvironmentalOpen in IMG/M
3300034151Sediment microbial communities from East River floodplain, Colorado, United States - 2_s17EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID Sample Taxon ID Habitat Sequence
JGI11643J12802_1160401313300000890SoilLISASADPDDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEASK*
JGI10214J12806_1009384433300000891SoilMMTPQEYSTPLIGGSVDPGSIYQSVRNAWRDWQARRIHQRVMRELE
JGI24746J21847_105476213300001977Corn, Switchgrass And Miscanthus RhizosphereMLRVMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNT
Ga0062589_10217134813300004156SoilMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0062592_10077592413300004480SoilMTPQEFSTPPLIGASVDPGSIYNDIKKTWREWQARRIHERVVKELEEFERARRAASENEN
Ga0070676_1008830533300005328Miscanthus RhizosphereMVRMITPTEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0070676_1014264523300005328Miscanthus RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK*
Ga0070676_1037005213300005328Miscanthus RhizosphereMLRVMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAAAADT*
Ga0070670_10007246223300005331Switchgrass RhizosphereMITPTEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0070677_1000372823300005333Miscanthus RhizosphereMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAAAADT*
Ga0070677_1014812313300005333Miscanthus RhizosphereMLRVMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK*
Ga0070689_10166529123300005340Switchgrass RhizosphereTPQEFSTPLISGSVDPGEIMNGIKKAWRDWQARRIHERVVKELEEFERMRAAAGAGSDDKVD*
Ga0070687_10001348023300005343Switchgrass RhizosphereMTPQMFSTPLISGSADPGEIYNGIKNAWREWQARRIHERVMKELEELEQLNTAAADANK*
Ga0070668_10086372823300005347Switchgrass RhizosphereMLRVMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADAN
Ga0070669_10071141813300005353Switchgrass RhizosphereMMTPQEFSTPLIGVSTDPGAIYNDIKKAWREWQARRIHERVVKEIEELERMRAASGKDD*
Ga0070669_10109061813300005353Switchgrass RhizosphereMLRVMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLN
Ga0070673_10002038423300005364Switchgrass RhizosphereMITPMEFSTPLISTSVDSGNIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0070701_1064137113300005438Corn, Switchgrass And Miscanthus RhizosphereMLRVMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAAAA
Ga0070678_10024523233300005456Miscanthus RhizosphereMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLRAPQDECK*
Ga0070678_10052115123300005456Miscanthus RhizosphereMLRVMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAA
Ga0070664_10209315913300005564Corn RhizosphereMMTPQAFSTPLISASADPGDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEASK*
Ga0068861_10003152343300005719Switchgrass RhizosphereMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0075422_1011979723300006196Populus RhizosphereMMTPMAFSTPLISASVDPGDIYHDFKRAWHDWQARRIHERVVRELEELDRLPAAGETSK*
Ga0068871_10030085323300006358Miscanthus RhizosphereMVRMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0075428_10091091523300006844Populus RhizosphereMTPQEFSTPLISGSADPGEIYNGIKSAWREWQARRIHERVMKELEELEQLNAAAADANK*
Ga0075428_10104781023300006844Populus RhizosphereTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK*
Ga0075421_10011222713300006845Populus RhizosphereMLRVMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKEIEALKAASDSNSDSN*
Ga0075421_10031534413300006845Populus RhizosphereMTPEEFSTPLIAGSVDPGSIMNEMKKAWRDWQARRIHERVTKEREELERINAAADAASK*
Ga0075430_10023742323300006846Populus RhizosphereMMTPQEFSTPLIGVSTDPGAIYNDFKKAWREWQARRIHERVVKEIEELERMRAASGKDD*
Ga0075420_10162020113300006853Populus RhizosphereMLRVMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKELEALKAASDSN*
Ga0075434_10017247933300006871Populus RhizosphereHQEMLRVMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK*
Ga0075434_10113294323300006871Populus RhizosphereMTPQEFSTPPLIGASVDPGSIYNDIKKTWREWQARRIHERVVKELEEFERARR
Ga0079217_1033884323300006876Agricultural SoilMMTPQEYSTPLIGGSADPGSIYQSIRNAWRDWQARRIHQRVMRELEELERLNRAAEEEAK
Ga0075419_1031191523300006969Populus RhizosphereMTPQEFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNAAAADANK*
Ga0079218_1011921023300007004Agricultural SoilMMTPQMFSTPLISATVDPGDVYDGFKRSWRDWQARRIRARVTRELEELERLRATEEASGINPGLPALSH*
Ga0111539_10021528103300009094Populus RhizosphereMMTPMAFSTPLISASVDPGDIYHDFKRAWHDWQARRIHERVVRELEELDRLRAAGETSK*
Ga0111539_1014549133300009094Populus RhizosphereMVRMMTPLEFATPLISGSADPGNIYNGLKRAWRDWQARRIHERVTRELEELERLRAPQDECK*
Ga0075418_1094708513300009100Populus RhizosphereMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKEIEALKAASDSNSDSN*
Ga0114129_1015358433300009147Populus RhizosphereEMLRVMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKELEALKAASDSN*
Ga0114129_1015546743300009147Populus RhizosphereEMLRVMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKEIEALKAASDSNSDSN*
Ga0111538_1020072723300009156Populus RhizosphereMMTPMAFSTPLISGSVDPGDIYHDFKRAWHDWQARRIHERVVRELEELDRLRAAGETSK*
Ga0111538_1342783913300009156Populus RhizosphereTPLVSRSVDPGEIYNGIRKAWRESQARRIHERVMKELEELERLNAAADPEK*
Ga0105248_1086483823300009177Switchgrass RhizosphereMVRMITPMEFSTPLISTSVDSGNIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0126384_1153716713300010046Tropical Forest SoilMVRMMTPQEFSTPLISGSVDPGSILNSIKKAWREREERRVHERVMKELEELYRLNEAAAADSQ*
Ga0126382_1014938713300010047Tropical Forest SoilPLISAGVDPGAIMNSVKTAWREWQARRVHERVMKELEELKRLNDAAGNESQ*
Ga0126377_1292499323300010362Tropical Forest SoilMLRMMTPQEFSTPLISGSVDPGSIVNAIKKAWREREERRVHERVMKELEELYRLNEAAAADSQ*
Ga0134121_1328449233300010401Terrestrial SoilPQEFSTPPLIGASVDPGSIYNDIKKTWREWQARRIHERVVKELEEFERARRAASENEN*
Ga0157303_1030466413300012896SoilMVRMITPMEFSTPLISASVDSGDIYNGLKRAWRDRQARRIHERVTRELEELARLSN*
Ga0157285_1002592813300012897SoilMVRMITPMEFSTPLISASVDSGDIYNGLKRAWRDRQARRIHERVTRELEELARLSN
Ga0157288_1024295623300012901SoilMVRMITPMEFSTPLISASVDSGDIYNGLKRAWRDRQARRIHERVTRELEELERLSN*
Ga0157301_1004918613300012911SoilNKMVWMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0157302_1038028713300012915SoilMVWMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN*
Ga0164241_1040868813300012943SoilMITPMEFSTPLISTSVDSGDIYNGFKRAWRDWQARRIHERVTRELEELERLSN*
Ga0157307_100817913300013096SoilMVWMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTREREQVERL
Ga0157380_1123752523300014326Switchgrass RhizosphereMMTPQEYSTPLIGGSVDPGSIYQSVRNAWRDWQARRIHQRVMRELEELERLNRAAEQEAR
Ga0132258_1069559923300015371Arabidopsis RhizosphereMLRVMTPQEFSTPPLISGSVDPGQMINSIKQSWRDWQARRIHERVMKEVEALKAAAADSDSGSN*
Ga0132256_10017519523300015372Arabidopsis RhizosphereMLRVMTPQEFSTPPLISGSVDPGQMINSIKQSWRDWQARRIHERVMKEVEALKAAAADSDSDSGSN*
Ga0132257_10025908713300015373Arabidopsis RhizosphereMLRVMTPQEFSTPPLISGSVDPGQMINSIKQSWRDWQARRIHERVMKEVEALKAAAAD
Ga0163161_1005680433300017792Switchgrass RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADA
Ga0184640_1024406023300018074Groundwater SedimentMMTPQEYSTPLIGGSVDPGSIYQSIRNAWRDWQARRIHQRVMRELEELERLNRAAEEEAK
Ga0184627_1018507913300018079Groundwater SedimentRMMTPREYSTPLIGGSVDPGSIYQSIRNAWRDWQARRIHERVMRELEELERLNRAAEEEA
Ga0190270_1251706213300018469SoilRMMTPMEFSTPLISTSVDPGDIYNGFKGAWRDWRVRRIHERVTRELEELERLRAAEEASK
Ga0190274_1101534523300018476SoilMMTPQQFSTPLISATVDPGDVYNGFKRAWRDGQAQRIRARITRELEELERLRAAEEASK
Ga0173481_1006895913300019356SoilEMVRMMTPMEFSTPLISASVDSGDIYNGLKRAWRDRQARRIHERVTRELEELARLSN
Ga0173479_1021608823300019362SoilMMTPMEFSTPLISASVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0247792_114331113300022880SoilPQAFSTPLISASADPDDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEASK
Ga0210114_107633413300025795Natural And Restored WetlandsMVRFMTPQEFSTPLIGLSVDPGSMMDEMKKAWRDWQARRIHERVTKEREELERIHAAADAPSK
Ga0207682_1000684743300025893Miscanthus RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKEL
Ga0207682_1001485113300025893Miscanthus RhizosphereMVRMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0207688_1006063523300025901Corn, Switchgrass And Miscanthus RhizosphereMITPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0207645_1000828633300025907Miscanthus RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK
Ga0207645_1022620823300025907Miscanthus RhizosphereMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAAAADT
Ga0207662_1002527223300025918Switchgrass RhizosphereMTPQMFSTPLISGSADPGEIYNGIKNAWREWQARRIHERVMKELEELEQLNTAAADANK
Ga0207681_1031629913300025923Switchgrass RhizosphereMMTPQEFSTPLIGVSTDPGAIYNDIKKAWREWQARRIHERVVKEIEELERMRAASGKDD
Ga0207681_1093310423300025923Switchgrass RhizosphereMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAA
Ga0207659_1007179723300025926Miscanthus RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLKTAAADANK
Ga0207701_1089588623300025930Corn, Switchgrass And Miscanthus RhizosphereREMLRVMTPQLFSTPLISGSVDPGEVTGSIRRAWRERQARRIHERVMKEVEDLERLNAAAAADT
Ga0207679_1190253313300025945Corn RhizosphereRMMTPQAFSTPLISASADPGDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEASK
Ga0207651_1094346913300025960Switchgrass RhizosphereISTSVDSGNIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0207648_1017797113300026089Miscanthus RhizosphereMITPTEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0207648_1088520123300026089Miscanthus RhizosphereMLRVMTPQEFSTPPLIGASVDPGSIYNDIKKTWREWQARRIHERVVKELEEFERARRAASENEN
Ga0207675_10104375023300026118Switchgrass RhizosphereMTPQMFSTPLISGSADPGEIYNGIKNAWREWQARRIHERVMKELEELEQLNAAAADANK
Ga0207683_1009073243300026121Miscanthus RhizosphereMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0207428_1002931133300027907Populus RhizosphereMTPQQFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK
Ga0207428_1051136223300027907Populus RhizosphereEMVRMMTPLEFATPLISGSADPGNIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0209382_1010985913300027909Populus RhizosphereQEMLRVMTPQEFSTPLISASADPGEIYNSIKKAWRDWQARRVHERVMKEIEALKAASDSNSDSN
Ga0209382_1015409033300027909Populus RhizosphereMTPEEFSTPLIAGSVDPGSIMNEMKKAWRDWQARRIHERVTKEREELERINAAADAASK
Ga0209382_1077651423300027909Populus RhizosphereMTPQEFSTPLISGSADPGEIYNGIKSAWREWQARRIHERVMKELEELEQLNAAAADANK
Ga0209382_1217596113300027909Populus RhizosphereMTPQLATPLISASVDPGSIYQGIKSAWREWQARRVHE
Ga0268264_1047482123300028381Switchgrass RhizosphereMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELDQLNTA
Ga0268264_1079175713300028381Switchgrass RhizosphereMMTPQEFSTPLIGVSTDPGAIYNDIKKAWREWQARRI
Ga0247828_1098179933300028587SoilVMTPQEFSTPPLIGASVDPGSIYNDIKKTWREWQARRIHERVVKELEEFERARRAASEND
Ga0247827_1080967523300028889SoilPVEFSTPLISASVDPGDIYNGFKRAWRGAQARRIQERVTRELEELERLRAAQGASK
Ga0307499_1005588713300031184SoilMMTPMEFSTPLISVGVDPGDIYSGFKSAWRNWQARRIHQRVTREREELERLRAVEEASKQ
(restricted) Ga0255312_110488923300031248Sandy SoilEFSTPLIAGSVDPGSIMNEMKKAWRDWQARRIHERVTKEREELERINAAADAASK
Ga0310888_1011672613300031538SoilEMVRMMTPMEFSTPLISASVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0310887_1055197523300031547SoilKEMVRMMTPQAFSTPLISASADPGDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEASK
Ga0310813_1007498313300031716SoilMFSTPLISGSADPGEIYNGIKNAWREWQARRIHERVMKELEELEQLNTAAADANK
Ga0310813_1010016333300031716SoilMTPQQFSTPLISGSADPGEIYNGIKNAWREWQARRIHERVMKELEE
Ga0307468_10001569013300031740Hardwood Forest SoilMMTPMEFSTPPLISGSVDPGNVYNSLKRAWHDWQARRIHERVTREL
Ga0310893_1002798123300031892SoilSHKEMVRMMTPMAFSTPLISASVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0310891_1036571223300031913SoilMMTPMEFSTPLISASVDPGDIYNAFKRAWRDSQARRIHERITRELEELERLRAAQAK
Ga0310884_1003785123300031944SoilAFSTPLISASVDSGDIYNGLKRAWRDWQARRIHERVTRELEELERLSN
Ga0310902_1003437433300032012SoilMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQLNTAAADANK
Ga0310902_1066530923300032012SoilMTPQQFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEE
Ga0310906_1018759013300032013SoilVRMITPMEFSTPLISASVDSGDIYNGLKRAWRDRQARRIHERVTRELEELARLSN
Ga0310899_1012503023300032017SoilMMTPMEFSTPLISTSVDSGDIYNGLKRAWRDWQARRIHERVVKELEEFERTRAVAGSEDN
Ga0310890_1069092213300032075SoilQEFSTPLISASADPGAVYNEIRKAWRDWQARRIHEQVVKELEAFERNRRAARGKED
Ga0310896_1059071413300032211SoilVRMMTPQAFSTPLISASADPGDIYNGFKRAWRDWQARRIHERVTREREQVERLRTAEEAS
Ga0310811_1010752733300033475SoilMTPQMFSTPLISGSADPGEIYNGIRNAWREWQARRIHERVMKELEELEQQNTAAADANK
Ga0364935_0099895_2_1573300034151SedimentMVRMMTPMEFSTPLISASVDSGDIYNGLKRAWRGWQARRIHERVTRELEELE
Ga0364935_0170921_65_2533300034151SedimentMVRMMTPMEFATPLISGSVDPGHIYNGLKRGWRDWQARRIHERVTREREELERLRAADEASR

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Biomedical Sciences Research Center "Alexander Fleming"
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