Metagenome Family F084416

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084416
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	69 residues
Representative Sequence	MNYSTKGGFAWYLDITPNQMFSLYDYPIPGKSGLPLCEEHGRQLELKEVVLYDKQATELAPPDQCWVCKE
Number of Associated Samples	60
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	26.85 %
% of genes near scaffold ends (potentially truncated)	20.54 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.71

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (62.500 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands (22.321 % of family members)
Environment Ontology (ENVO)	Unclassified (25.000 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Water (non-saline) (36.607 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 15.31% β-sheet: 18.37% Coil/Unstructured: 66.33%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.71
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.71
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Structural matches with SCOPe domains

SCOP family	SCOP domain	Representative PDB	TM-score
d.58.7.0: automated matches	d2lmia1	2lmi	0.54032
d.58.32.1: Vanillyl-alcohol oxidase-like	d1wvfa1	1wvf	0.51849
c.94.1.1: Phosphate binding protein-like	d2i49a_	2i49	0.51844
d.264.1.1: PriA-like	d1zt2a1	1zt2	0.51499
c.94.1.0: automated matches	d4i62a_	4i62	0.51305

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF12638	Staygreen	4.46
PF03781	FGE-sulfatase	3.57
PF13302	Acetyltransf_3	1.79
PF00665	rve	1.79
PF13335	Mg_chelatase_C	1.79
PF00753	Lactamase_B	1.79
PF00932	LTD	1.79
PF00501	AMP-binding	0.89
PF13612	DDE_Tnp_1_3	0.89
PF12728	HTH_17	0.89
PF13189	Cytidylate_kin2	0.89
PF00872	Transposase_mut	0.89
PF13401	AAA_22	0.89
PF01695	IstB_IS21	0.89
PF07676	PD40	0.89
PF13683	rve_3	0.89
PF02518	HATPase_c	0.89
PF00069	Pkinase	0.89
PF04545	Sigma70_r4	0.89
PF14528	LAGLIDADG_3	0.89
PF00565	SNase	0.89
PF13495	Phage_int_SAM_4	0.89
PF00300	His_Phos_1	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.57
COG1262	Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain	Posttranslational modification, protein turnover, chaperones [O]	3.57
COG2801	Transposase InsO and inactivated derivatives	Mobilome: prophages, transposons [X]	1.79
COG2826	Transposase and inactivated derivatives, IS30 family	Mobilome: prophages, transposons [X]	1.79
COG3316	Transposase (or an inactivated derivative), DDE domain	Mobilome: prophages, transposons [X]	1.79
COG4584	Transposase	Mobilome: prophages, transposons [X]	1.79
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.89
COG3328	Transposase (or an inactivated derivative)	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
All Organisms	root	All Organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
cellular organisms	root	All Organisms → cellular organisms	37.50 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	35.71 %
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	17.86 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	1.79 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	16.07 %
Cyanobacteria/Melainabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group	1.79 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	1.79 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	0.89 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	8.93 %
Anaerolineae	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae	1.79 %
Nitrosopumilales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales	1.79 %
Cyanobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1.79 %
Tepidiformia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia	0.89 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.89 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Chloroflexi bacterium RBG_16_54_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	2.68 %
Anaerolineales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales	1.79 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.89 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.89 %
unclassified Nitrosopumilales	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales	0.89 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.89 %
Nitrosopumilaceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae	0.89 %
Desulfuromonadales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales	0.89 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.89 %
unclassified Tepidiformia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia	0.89 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Chloroflexi bacterium RBG_16_54_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	2.68 %
unclassified Anaerolineales	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales	1.79 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.89 %
Geobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae	0.89 %
Nitrosopumilus	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus	0.89 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.89 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.89 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.89 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.89 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Chloroflexi bacterium RBG_16_54_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	2.68 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1.79 %
unclassified Nitrosopumilus	no rank	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus	0.89 %
unclassified Geobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.89 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.89 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.89 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.89 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.89 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	62.50 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	4.46 %
Chloroflexi bacterium RBG_16_54_18	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	2.68 %
Anaerolineales bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	1.79 %
Nitrosopumilus sp.	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	0.89 %
Geobacteraceae bacterium GWB2_52_12	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWB2_52_12	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Nitrosopumilales archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	0.89 %
Chloroflexi bacterium OLB14	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	0.89 %
Chloroflexi bacterium ADurb.Bin360	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	0.89 %
Synechococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	0.89 %
Chloroflexi bacterium HGW-Chloroflexi-10	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	0.89 %
Acidobacteria bacterium 13_1_20CM_3_53_8	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_106825899	Not Available	686	Open in IMG/M
3300001213\|JGIcombinedJ13530_107009429	Not Available	534	Open in IMG/M
3300001213\|JGIcombinedJ13530_107512793	Not Available	722	Open in IMG/M
3300001213\|JGIcombinedJ13530_108994870	Not Available	507	Open in IMG/M
3300004481\|Ga0069718_11672279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	792	Open in IMG/M
3300004481\|Ga0069718_13701114	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_20CM_3_53_8	851	Open in IMG/M
3300005782\|Ga0079367_1146707	All Organisms → cellular organisms → Bacteria	935	Open in IMG/M
3300005830\|Ga0074473_11170987	Not Available	1219	Open in IMG/M
3300005830\|Ga0074473_11189543	Not Available	2129	Open in IMG/M
3300005832\|Ga0074469_10218468	All Organisms → cellular organisms → Bacteria	4865	Open in IMG/M
3300005832\|Ga0074469_10315522	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	4500	Open in IMG/M
3300006224\|Ga0079037_100253424	All Organisms → cellular organisms → Bacteria	1611	Open in IMG/M
3300006224\|Ga0079037_100424946	Not Available	1262	Open in IMG/M
3300006224\|Ga0079037_100556935	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	1107	Open in IMG/M
3300006224\|Ga0079037_101201683	Not Available	754	Open in IMG/M
3300006224\|Ga0079037_101329731	Not Available	716	Open in IMG/M
3300008517\|Ga0111034_1280357	Not Available	1034	Open in IMG/M
3300009009\|Ga0105105_10040744	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2059	Open in IMG/M
3300009053\|Ga0105095_10181161	All Organisms → cellular organisms → Bacteria	1153	Open in IMG/M
3300009075\|Ga0105090_10853463	Not Available	554	Open in IMG/M
3300009078\|Ga0105106_10617828	Not Available	776	Open in IMG/M
3300009081\|Ga0105098_10008723	All Organisms → cellular organisms → Bacteria	3707	Open in IMG/M
3300009082\|Ga0105099_10017128	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Anaerolineae → Anaerolineales → unclassified Anaerolineales → Anaerolineales bacterium	3682	Open in IMG/M
3300009085\|Ga0105103_10142730	All Organisms → cellular organisms → Bacteria	1262	Open in IMG/M
3300009087\|Ga0105107_10422668	Not Available	929	Open in IMG/M
3300009091\|Ga0102851_10373060	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria	1426	Open in IMG/M
3300009091\|Ga0102851_10604091	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	1147	Open in IMG/M
3300009091\|Ga0102851_10791388	Not Available	1013	Open in IMG/M
3300009091\|Ga0102851_11402626	Not Available	776	Open in IMG/M
3300009091\|Ga0102851_12021899	Not Available	653	Open in IMG/M
3300009091\|Ga0102851_12693769	Not Available	570	Open in IMG/M
3300009091\|Ga0102851_13023118	Not Available	540	Open in IMG/M
3300009111\|Ga0115026_10393974	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1001	Open in IMG/M
3300009111\|Ga0115026_11293995	Not Available	598	Open in IMG/M
3300009131\|Ga0115027_10669787	Not Available	774	Open in IMG/M
3300009131\|Ga0115027_10725548	Not Available	749	Open in IMG/M
3300009167\|Ga0113563_10213490	Not Available	1930	Open in IMG/M
3300009167\|Ga0113563_10216178	Not Available	1920	Open in IMG/M
3300009167\|Ga0113563_10293576	All Organisms → cellular organisms → Bacteria	1681	Open in IMG/M
3300009167\|Ga0113563_10498900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium RBG_16_54_18	1326	Open in IMG/M
3300009167\|Ga0113563_11157220	Not Available	899	Open in IMG/M
3300009167\|Ga0113563_11549064	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	782	Open in IMG/M
3300009167\|Ga0113563_12655600	Not Available	605	Open in IMG/M
3300009167\|Ga0113563_13814535	All Organisms → cellular organisms → Bacteria	510	Open in IMG/M
3300009167\|Ga0113563_13893296	Not Available	506	Open in IMG/M
3300009179\|Ga0115028_12080101	Not Available	503	Open in IMG/M
3300009529\|Ga0114919_10148868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1685	Open in IMG/M
3300009614\|Ga0116104_1054847	Not Available	859	Open in IMG/M
3300012931\|Ga0153915_10615907	Not Available	1249	Open in IMG/M
3300012931\|Ga0153915_13127009	Not Available	538	Open in IMG/M
3300012964\|Ga0153916_10090142	All Organisms → cellular organisms → Bacteria	2877	Open in IMG/M
3300012964\|Ga0153916_11311623	Not Available	801	Open in IMG/M
3300012964\|Ga0153916_11379919	Not Available	781	Open in IMG/M
3300012964\|Ga0153916_12037199	Not Available	644	Open in IMG/M
(restricted) 3300013126\|Ga0172367_10008777	All Organisms → cellular organisms → Bacteria	11244	Open in IMG/M
3300014502\|Ga0182021_10359045	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfuromonadales → Geobacteraceae → unclassified Geobacteraceae → Geobacteraceae bacterium GWB2_52_12	1723	Open in IMG/M
3300014502\|Ga0182021_11439520	Not Available	830	Open in IMG/M
3300014502\|Ga0182021_11628531	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	777	Open in IMG/M
3300014502\|Ga0182021_11970670	Not Available	703	Open in IMG/M
3300014839\|Ga0182027_11283960	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium ADurb.Bin360	731	Open in IMG/M
3300018005\|Ga0187878_1145062	Not Available	924	Open in IMG/M
3300018015\|Ga0187866_1084242	Not Available	1346	Open in IMG/M
3300018018\|Ga0187886_1191975	Not Available	791	Open in IMG/M
3300022208\|Ga0224495_10122080	Not Available	1127	Open in IMG/M
3300024056\|Ga0124853_1158301	Not Available	1523	Open in IMG/M
3300025167\|Ga0209642_10591257	Not Available	605	Open in IMG/M
3300025313\|Ga0209431_10629709	Not Available	801	Open in IMG/M
3300027683\|Ga0209392_1031714	Not Available	1711	Open in IMG/M
3300027713\|Ga0209286_1001346	All Organisms → cellular organisms → Bacteria	7580	Open in IMG/M
3300027858\|Ga0209013_10329085	Not Available	867	Open in IMG/M
3300027858\|Ga0209013_10358089	Not Available	820	Open in IMG/M
3300027858\|Ga0209013_10540626	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Tepidiformia → unclassified Tepidiformia → Chloroflexi bacterium OLB14	621	Open in IMG/M
3300027858\|Ga0209013_10611164	Not Available	570	Open in IMG/M
3300027858\|Ga0209013_10669522	Not Available	534	Open in IMG/M
3300027885\|Ga0209450_10457093	All Organisms → cellular organisms → Bacteria	934	Open in IMG/M
3300027885\|Ga0209450_10942426	Not Available	615	Open in IMG/M
3300027887\|Ga0208980_10255714	Not Available	1018	Open in IMG/M
3300027897\|Ga0209254_10007151	All Organisms → cellular organisms → Bacteria	10292	Open in IMG/M
3300027897\|Ga0209254_10063015	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	3194	Open in IMG/M
3300027897\|Ga0209254_10343345	Not Available	1126	Open in IMG/M
3300027897\|Ga0209254_10454915	Not Available	935	Open in IMG/M
3300027897\|Ga0209254_10596243	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	780	Open in IMG/M
3300027900\|Ga0209253_10060296	All Organisms → cellular organisms → Bacteria	3139	Open in IMG/M
3300027917\|Ga0209536_100257543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	2186	Open in IMG/M
3300027975\|Ga0209391_10428099	Not Available	504	Open in IMG/M
3300030613\|Ga0299915_10820337	Not Available	578	Open in IMG/M
3300031999\|Ga0315274_10706485	Not Available	1089	Open in IMG/M
3300032118\|Ga0315277_10092686	All Organisms → cellular organisms → Bacteria	3417	Open in IMG/M
3300032118\|Ga0315277_10117343	All Organisms → cellular organisms → Bacteria	2982	Open in IMG/M
3300032118\|Ga0315277_11578058	Not Available	557	Open in IMG/M
3300032143\|Ga0315292_10242374	All Organisms → cellular organisms → Bacteria	1487	Open in IMG/M
3300032143\|Ga0315292_11059480	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → unclassified Nitrosopumilales → Nitrosopumilales archaeon	672	Open in IMG/M
3300032163\|Ga0315281_10371543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium HGW-Chloroflexi-10	1546	Open in IMG/M
3300032164\|Ga0315283_12337368	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrosopumilales → Nitrosopumilaceae → Nitrosopumilus → unclassified Nitrosopumilus → Nitrosopumilus sp.	522	Open in IMG/M
3300032401\|Ga0315275_10783014	Not Available	1058	Open in IMG/M
3300033408\|Ga0316605_12176451	Not Available	540	Open in IMG/M
3300033408\|Ga0316605_12181312	Not Available	539	Open in IMG/M
3300033414\|Ga0316619_11228256	Not Available	663	Open in IMG/M
3300033416\|Ga0316622_102558925	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	588	Open in IMG/M
3300033418\|Ga0316625_101663533	Not Available	613	Open in IMG/M
3300033418\|Ga0316625_102563958	Not Available	517	Open in IMG/M
3300033482\|Ga0316627_100625670	Not Available	985	Open in IMG/M
3300033483\|Ga0316629_10703999	Not Available	765	Open in IMG/M
3300033485\|Ga0316626_10477399	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Cyanobacteria → Synechococcales	1057	Open in IMG/M
3300033487\|Ga0316630_12189612	Not Available	511	Open in IMG/M
3300033513\|Ga0316628_100538295	All Organisms → cellular organisms → Bacteria	1513	Open in IMG/M
3300033557\|Ga0316617_100403304	Not Available	1207	Open in IMG/M
3300033557\|Ga0316617_101679003	Not Available	646	Open in IMG/M

Note: Some of these datasets are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	81.25%
Terrestrial	Environmental → Terrestrial	18.75%

Habitat	Taxonomy	Distribution
Freshwater	Environmental → Aquatic → Freshwater	63.39%
Soil	Environmental → Terrestrial → Soil	18.75%
Marine	Environmental → Aquatic → Marine	14.29%
Sediment	Environmental → Aquatic → Sediment	3.57%

Habitat	Taxonomy	Distribution
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	31.25%
Sediment	Environmental → Aquatic → Freshwater → Sediment	16.07%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	16.07%
Lake	Environmental → Aquatic → Freshwater → Lake	8.93%
Lentic	Environmental → Aquatic → Freshwater → Lentic	7.14%
Wetlands	Environmental → Aquatic → Marine → Wetlands	5.36%
Oil Seeps	Environmental → Aquatic → Marine → Oil Seeps	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	3.57%
Oceanic	Environmental → Aquatic → Marine → Oceanic	1.79%
Coastal	Environmental → Aquatic → Marine → Coastal	1.79%
Loam	Environmental → Terrestrial → Soil → Loam	1.79%
Sediment	Environmental → Aquatic → Marine → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	28.57%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	16.07%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.61%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	8.04%
Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment	7.14%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	5.36%
Unclassified	Environmental → Aquatic → Marine → Oil Seeps → Unclassified	4.46%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	3.57%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	2.68%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	1.79%
Sediment	Environmental → Aquatic → Marine → Coastal → Sediment	1.79%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	0.89%
Unclassified	Environmental → Aquatic → Marine → Sediment → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	22.32%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	11.61%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	9.82%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	8.04%
Freshwater Lake Sediment	Environmental → Aquatic → Freshwater → Lentic → Sediment → Freshwater Lake Sediment	7.14%
Freshwater Wetlands	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Freshwater Wetlands	5.36%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	5.36%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	4.46%
Marine	Environmental → Aquatic → Marine → Oil Seeps → Unclassified → Marine	4.46%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	4.46%
Sediment (Intertidal)	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal)	3.57%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Sediment	1.79%
Marine Sediment	Environmental → Aquatic → Marine → Coastal → Sediment → Marine Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.89%
Deep Subsurface	Environmental → Aquatic → Marine → Oceanic → Sediment → Deep Subsurface	0.89%
Sediment	Environmental → Aquatic → Marine → Sediment → Unclassified → Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300004481	Combined Assembly of Gp0112041, Gp0112042, Gp0112043	Environmental	Open in IMG/M
3300005782	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 125 cmbsf, PM3	Environmental	Open in IMG/M
3300005830	Microbial communities from Youngs Bay mouth sediment, Columbia River estuary, Oregon - S.178_YBM	Environmental	Open in IMG/M
3300005832	Microbial communities from Baker Bay sediment, Columbia River estuary, Washington - S.41_BBB	Environmental	Open in IMG/M
3300006224	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 4 metaG	Environmental	Open in IMG/M
3300008517	Marine sediment microbial communities from Aarhus Bay station M5, Denmark - 175 cmbsf. Combined Assembly of Gp0128389 and Gp0131431 MM4PM4	Environmental	Open in IMG/M
3300009009	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm September2015	Environmental	Open in IMG/M
3300009053	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009075	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015	Environmental	Open in IMG/M
3300009078	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009081	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm May2015	Environmental	Open in IMG/M
3300009082	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 1-3cm May2015	Environmental	Open in IMG/M
3300009085	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 10-12cm September2015	Environmental	Open in IMG/M
3300009087	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (1) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009091	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300009111	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_0915_D1	Environmental	Open in IMG/M
3300009131	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Open_0915_D1	Environmental	Open in IMG/M
3300009167	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG - Illumina Assembly (version 2)	Environmental	Open in IMG/M
3300009179	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Plant_0915_D1	Environmental	Open in IMG/M
3300009529	Deep subsurface microbial communities from Black Sea to uncover new lineages of life (NeLLi) - Black_00105 metaG	Environmental	Open in IMG/M
3300009614	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_4_150	Environmental	Open in IMG/M
3300012931	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 3 metaG	Environmental	Open in IMG/M
3300012964	Freshwater wetland microbial communities from Ohio, USA - Open water 3 Core 3 Depth 4 metaG	Environmental	Open in IMG/M
3300013126 (restricted)	Freshwater microbial communities from Kabuno Bay, South-Kivu, Congo ? kab_022012_10m	Environmental	Open in IMG/M
3300014502	Permafrost microbial communities from Stordalen Mire, Sweden - 612E3M metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300018005	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_17_150	Environmental	Open in IMG/M
3300018015	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_150	Environmental	Open in IMG/M
3300018018	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_150	Environmental	Open in IMG/M
3300022208	Sediment microbial communities from San Francisco Bay, California, United States - SF_Jul11_sed_USGS_4_1	Environmental	Open in IMG/M
3300024056	Freshwater wetland microbial communities from Ohio, USA, analyzing the effect of biotic and abiotic controls - Mud 3 Core 4 Depth 3 metaG (PacBio error correction)	Environmental	Open in IMG/M
3300025167	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_2 (SPAdes)	Environmental	Open in IMG/M
3300025313	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 13_3 (SPAdes)	Environmental	Open in IMG/M
3300027683	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm May2015 (SPAdes)	Environmental	Open in IMG/M
3300027713	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P8 Core (3) Depth 10-12cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300027858	Oil polluted marine microbial communities from Coal Oil Point, Santa Barbara, California, USA - Sample 2 (SPAdes)	Environmental	Open in IMG/M
3300027885	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - LWP11 LW (SPAdes)	Environmental	Open in IMG/M
3300027887	Wetland microbial communities from Twitchell Island in the Sacramento Delta, sample from surface sediment Aug2011 Site A1 Bulk	Environmental	Open in IMG/M
3300027897	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - DIP11 DI (SPAdes)	Environmental	Open in IMG/M
3300027900	Freshwater lake sediment microbial communities from the University of Notre Dame, USA, for methane emissions studies - BRP12 BR (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300027975	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 1-3cm March2015 (SPAdes)	Environmental	Open in IMG/M
3300030613	Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT92D227	Environmental	Open in IMG/M
3300031999	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G02_20	Environmental	Open in IMG/M
3300032118	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G05_15	Environmental	Open in IMG/M
3300032143	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G13_0	Environmental	Open in IMG/M
3300032163	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G07_0	Environmental	Open in IMG/M
3300032164	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G09_0	Environmental	Open in IMG/M
3300032401	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G03_0	Environmental	Open in IMG/M
3300033408	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_soil_day20_noCT	Environmental	Open in IMG/M
3300033414	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D4_B	Environmental	Open in IMG/M
3300033416	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_OW2_C1_D5_C	Environmental	Open in IMG/M
3300033418	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D1_A	Environmental	Open in IMG/M
3300033482	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D1_C	Environmental	Open in IMG/M
3300033483	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D1_A	Environmental	Open in IMG/M
3300033485	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_T1_C1_D5_A	Environmental	Open in IMG/M
3300033487	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_May_M1_C1_D6_A	Environmental	Open in IMG/M
3300033513	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M2_C1_D5_C	Environmental	Open in IMG/M
3300033557	Wetland soil microbial communities from Old Woman Creek delta, Ohio, United States - OWC_Aug_M1_C1_D2_B	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Note: Some of these sequences are restricted, as per the data usage policy of the Joint Genome Institute (JGI). Utilizing any of their features below requires obtaining a license from the datasets' corresponding author(s).

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1068258991	3300001213	Wetland	MSNYPNKTFSWYLDITPNQMFSIYHYPILGKAGLPLCEEHGRQLELKEVVLFDKVATEMAPPDHCWVC
JGIcombinedJ13530_1070094291	3300001213	Wetland	SQADARSFSWYLDITRNQMLSLYDYPIPGKSGLPLCEEHGRKLELKEVVLFDKAATKVAPNI*
JGIcombinedJ13530_1071267352	3300001213	Wetland	RLHAHLRADEIDTQSGNSYYTKFSMNYVIKNSFAWYLDITPNQMFSLYDYPISGKEGLPLCEEHGRLLEQKELVLYDKLATELAPLGHCWVCKE*
JGIcombinedJ13530_1075127932	3300001213	Wetland	MSVDTEHKYAWYLDITLNQMFSLYDYPIQGKTGLPLCGTHGRQLELKEVVVLDNVATEIAPLDHCWICEA*
JGIcombinedJ13530_1089948701	3300001213	Wetland	AVYNRLMEFAWYLDITPNKMFSLYDYPLSGKDGLPLCSLHGRQLELKEVVLYDQDATEIAPPDHCWVCKDE*
Ga0069718_116722792	3300004481	Sediment	MFAWYLDIAPNRIFSLYEYFVPGKEGLPLSEEHDKQLELKEVVFYDRKATELSPPDQCWVGE*
Ga0069718_137011142	3300004481	Sediment	MTDLAYAWYLDRTPNRMFSLYEYPIPGKDGLPLCEQHGRQLEQKEVVLYDRKATEISPPDQCWVCNG*
Ga0079367_11467072	3300005782	Marine Sediment	MKKHNWYLDISPNEMFSLYDYPVQGKDGLPLCEKHGKKLEMLEVVIFDREATELSPPDHCCVCGD*
Ga0074473_111709871	3300005830	Sediment (Intertidal)	MTESAIHLFAWYLDITPNQMFSLYKYPIPGKDGLPLCEKLGRQLEMKEVMLYDKDATEKSPPDHCWVCKG*
Ga0074473_111895432	3300005830	Sediment (Intertidal)	MTENAIHLFAWYLDITPNQMFSLYEYPIQGKTGLPLCGEHGRQLEQKEVVIYDQKATEAFPPDRCWVCKG*
Ga0074469_102184685	3300005832	Sediment (Intertidal)	VTEHPFAWNQDITPNKMFSLYRLLPTEKLGVPLCKEHGRQLELKEVVVFDKEGSEAFPPDHCWVCEE*
Ga0074469_103155222	3300005832	Sediment (Intertidal)	MSQPPPTFSWYLDITPNQMFSLYDYPINGKNGIHLCEEHGKQLELKEVVLYDKDATEKSPPDHCWVCED*
Ga0079037_1002534242	3300006224	Freshwater Wetlands	VIVFLSIIIKYAWHLDITPNQMFSLYDYPISRKDGLPFCEEHGKQPELKEVMLYDKEATELAPPDHCWVCRE*
Ga0079037_1004249462	3300006224	Freshwater Wetlands	MNYSTKGGFAWYLDITPNQMFSLYDYPIPGKSGLPLCEEHGRQLELKEVVLYDKQATELAPPDQCWVCKE*
Ga0079037_1005569351	3300006224	Freshwater Wetlands	MEYNIDKKYAWYLDITPNQMFSLYEYPIPGKDGLPLCELHGMKLELKEVVLYDKEATELAPPDHCWVCE*
Ga0079037_1012016832	3300006224	Freshwater Wetlands	MRSYTVRKFAWFLDITPNEMFSLYGYPIPSKNGLPLCEEHGQQLELREVVLYDEDATEMASPEHCWVCEE*
Ga0079037_1013297312	3300006224	Freshwater Wetlands	MDGYAIRKYAWFLDITPNAMFSLYEYPIPGKSGLPLCEEHGKQLAMKEVVLYDREATELSPPDHCWVCE*
Ga0079037_1024760402	3300006224	Freshwater Wetlands	PPVSVEKISNPRMSNALAWYLDLTPNQIFTLYDYPILGKDGLPLCEEHGRQLELKEVVLFDKATTEFSLPDHCWVCKE*
Ga0111034_12803572	3300008517	Marine Sediment	MDNNLMKKFTWYLDITPNEMFSLYDYPVPGKDGMPLCEKHGKKLEMLEVVIFDREATKLSPPDHCWVCGD*
Ga0105105_100407442	3300009009	Freshwater Sediment	MTEQSGGEFSWYLDITPNRMFSLYEYPKPGKDGSPLCEKHGRRLELKEVMASDREATEKAPPDHCRVCDT*
Ga0105095_101811613	3300009053	Freshwater Sediment	MNFAWYLDTTPNQMFSLYDYPIPGMDGIPLCEQHGRQLELKEVIVYDKDATELAPPNHCWVCDTEKL*
Ga0105090_108534631	3300009075	Freshwater Sediment	YTKHMNYSTKGDFAWYLDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDNDASEKYPPDHCWVCTG*
Ga0105106_106178281	3300009078	Freshwater Sediment	MTEQSGGEFSWYLDITPNRMFSLYEYPKPGKDGLPLCEKHGRRLELIEVVASDREATEKAPPDHCRVCDT*
Ga0105098_100087232	3300009081	Freshwater Sediment	MNYSTKGDFAWYLDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDNDASEKYPPDHCWVCTG*
Ga0105099_100171281	3300009082	Freshwater Sediment	MTEQSGGEFSWYLDITLNRMFSLYEYPKPGKDGSPLCEKHGRRLELKEVMASDREATEKAPPDHCRVCDT*
Ga0105103_101427301	3300009085	Freshwater Sediment	MIKYAWYLDLTPNKMFSLYTYPIPGKDGLPLCEQHGRQLELKEVVLYDKLATEKSPPD
Ga0105107_104226681	3300009087	Freshwater Sediment	MTEQSGGEFSWYLDITLNRMFSLYEYPKPGKDGLPLCEKHGRRLELIEVVASDREATEKAPPDHCRVCDT*
Ga0102851_103730604	3300009091	Freshwater Wetlands	MYGYAIRKYAWFRDITPNAMFSLYEYPIPGKSGLPLCEEHGKLLAMKEVVLYDREANELAPPDHCWVCEE*
Ga0102851_106040913	3300009091	Freshwater Wetlands	RVVIYLEAMEYNPDKKYAWYLDITPNQMFSLYDYPIPGKDGLPLCELHGQQLEAKEVVLYDKEATELAPPDHCWVCE*
Ga0102851_107913882	3300009091	Freshwater Wetlands	YAWYLDITPNQMFSLYDYPIPGKDGLPLCELHGTQLESKEVILYDKEATELALPDHCWVCKE*
Ga0102851_114026262	3300009091	Freshwater Wetlands	MEYSTETKNAWYLDITPNQMFSLGDYPVPGKAGLPLCELHGKQLELKEVVLYDKEATDLAPPDHCWVCKE*
Ga0102851_120218991	3300009091	Freshwater Wetlands	MIKFAWYLDLTPNRMFSLYDYPIPGKDGLPLCEQHGRQLEMKEVVLYDEVATEKSPPDHCWVCK*
Ga0102851_126937691	3300009091	Freshwater Wetlands	MSSYAVRTFAWFLDITPNGMFSLYEYPIPSKNGLPLCEEHGQQLELKEVVLYDREAAEIALPDHCWVFTE*
Ga0102851_130231181	3300009091	Freshwater Wetlands	MSSYTVRTFAWFLDITPNGMFSLYEYPIPGKNGLPLCEEHRQNLELKEVVLYDREATEMASPEHCWLCEE*
Ga0115026_103939741	3300009111	Wetland	MSSYIVRTFAWFLDITPNGMFSLYEYPIPGKNGLPLCEVHRQQLELKEVVLYDREAIEMAPPDHC
Ga0115026_112939951	3300009111	Wetland	MSVDTEHKYAWYLDITPNQMFSLYHYPNPGKTGLPLCGTHGRQLELKEVVVLNNVAAEIAPPDHCWVCEA*
Ga0115027_106697872	3300009131	Wetland	MNYSTKGGFAWYIDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDKDASEKYPPDHCWVCTG*
Ga0115027_107255482	3300009131	Wetland	MNKSAWYLDITPNQMLSLYDYPIAGKSGLPLCEEHGRQLEQKEVVLCDMLATELAPPDHCWVCNDA
Ga0113563_102134903	3300009167	Freshwater Wetlands	MEYNPDKKYAWYLDITPNQMFSLGDYPVPGKAGLPLCELHGKQLELKEVVLYDKEATDLAPPDHCWVCKE*
Ga0113563_102161783	3300009167	Freshwater Wetlands	MDGYTIRKYAWFRDITPNAMFSLYEYPISGKSGLPLCQEHGRQLAMKEVVFFDREATELAPPD
Ga0113563_102935763	3300009167	Freshwater Wetlands	MSCTAQNNFAWYLDITPNEMFSLCEYPIFGKRGIPLCEEHGQHLELKEVVLYDKLATELAPPDYCWVCKE*
Ga0113563_104304623	3300009167	Freshwater Wetlands	YYTKLKMSQAAQNQFAWYLDITPNQMFSRYDYPIPGKAGLPLCEEYGRQLGLKEVVLFDKAATEAFPPDHCWVCKE*
Ga0113563_104989002	3300009167	Freshwater Wetlands	MEYNTKKRYAWYLDITPNKMFSLYEYPIPGKDGLPLCELHGMKLELKEVVLYDKEATELAPPDHCWVCE*
Ga0113563_111572202	3300009167	Freshwater Wetlands	LDTGGKTIANNFSWYLDITPDQMFSLYDYPISGKSGLPLCEEHGRQLEQKEVILYDKQATELAPPDHCWVCKV*
Ga0113563_115490642	3300009167	Freshwater Wetlands	MGSNNDFKFGWYLDLTLNQMFSLHDYPIEGKCSLLLCQEYGRQFEMKEVVLYDLVATEAFPPDYCWVCEG*
Ga0113563_126556002	3300009167	Freshwater Wetlands	MGSTPTFAWYLDLTPNQMFSLYDYPIPGKDGLPLCEEYGRQLELKEVVLFQKIATEAPPPDYCWVCKE*
Ga0113563_131921812	3300009167	Freshwater Wetlands	AFIRVTHSLDRYILISHMSADTEHKFAWYLDITPNQMFSLYDYPIPGKSGLPLCEQHGKQLELKEVVLFDHAATELAPPDHCWVCKE*
Ga0113563_138145352	3300009167	Freshwater Wetlands	LEITPDQMFSLYDYRIPGKDGLPLCELHGQQLELKEVVLYDKEATELAPPDHCWVCED*
Ga0113563_138932962	3300009167	Freshwater Wetlands	SLAFSKSQAILFTRAMDGYTIRKYAWFLDITPNAMFSLYKYPISGKSGLPLCEEHGKQLELKEVVLYDREATEKSPPDHCWVCK*
Ga0115028_120801012	3300009179	Wetland	MSSYTVRTFVWFLDITPNGMFSLYEYPIPGKNGLPLCEEHGQQLELKEVVLYDKEATEIAPPDNCWVCRE*
Ga0114919_101488682	3300009529	Deep Subsurface	MKKFSWYLDITPNLMFSLYNYPIEGKDGMPLCQEHGKKLEMKEVVIIDRQATELRPPDHCWFCED*
Ga0116104_10548472	3300009614	Peatland	MQNNPPLVKYAWYLDITPNRMFSLYDDYPTRGKTGLPLCELHGRHLELKEAVVRDNEATEKSPPDHCWVCKL*
Ga0153915_106159073	3300012931	Freshwater Wetlands	MPEVMSQFAWYLDITPNQMFSLYYYPIPGKKGLPLCQVHGKQLEMKEVVVLDKTSTELALPDHCWVCEE*
Ga0153915_131270091	3300012931	Freshwater Wetlands	MSYNINPGFGWYLDITPNKMFSMNEYPILGKTGLPLCKLHCNQIELKEVVLYDEEATLMAPPDHCWICEE*
Ga0153916_100901422	3300012964	Freshwater Wetlands	MPEVMSRFAWYLDITPNQMFSLYDYPIPGKKGLPLCQVHGKQLEMKEVVVLDKTSTELALPDHCWVCEE*
Ga0153916_113116231	3300012964	Freshwater Wetlands	IQFACYLDIAPNQMFSLYYYPIPGKSGLPLCQEHGRQLEMKEVVVLDQIATELAPPDHCWACDR*
Ga0153916_113799192	3300012964	Freshwater Wetlands	MTENAILKYAWYLDITPNQMFSLYEYPIAGKTGLPLCVEQKEVVVYDRETTVKVPPDHCWVCKGWE*
Ga0153916_120371992	3300012964	Freshwater Wetlands	MMGEANPEFSWYLDLTPNLMFSLYDYPIANKSGLPLCKLHGRQLEQKEVVVLDKAATELDQPDHCWVCKD*
(restricted) Ga0172367_100087773	3300013126	Freshwater	MIGFAWYLDLTPNEMFSLYEYPIEGKRGLPLCSYHGENLEQREIVLLDQKATNMSPPDHCWACGK*
Ga0182021_103590452	3300014502	Fen	MIKQEFSWYLDITPNQMFSLYEYPILGKRGLPLCEKHGHQLEMKEVVVYDKEATEAFPPDRCWVCEE*
Ga0182021_114395201	3300014502	Fen	VENRPQVKFFWYLDLTPNRMFSLYDDYPTLGKTGLPLCEVHGQQLELKETVLRDNEATEKSPPDHCWVCKL*
Ga0182021_116285311	3300014502	Fen	MNNTQLSWYQDITPNKMFSLYDYPIPGKRGVPLCEHHGRQLEEKELVILDKEATEASQPDHCWVCGS*
Ga0182021_119706701	3300014502	Fen	MNFAWYLDITPNQMFSLYVYPILGKRGLPLCEEHGRQLELKEVVVYDKEATKKFPPDRCWVCDK*
Ga0182027_112839601	3300014839	Fen	MNYTQFAWYLDLTPNQMFSLYDYPIPGKRGLPLCEKHGRQLEMKEVVVFDKEATEAFPPDHCWVCE
Ga0187878_11450622	3300018005	Peatland	MKNSSEPVKYAWYLDITPNRMFSLYDDYPTPGKTGLPLCELHGQHLELKEAVMLDNEATEKSPPDHCWVCKL
Ga0187866_10842422	3300018015	Peatland	MQNNPPLVKYAWYLDITPNRMFSLYDDYPTRGKTGLPLCELHGRHLELKEAVVRDNEATEKSPPDHCWVCKL
Ga0187886_11919751	3300018018	Peatland	MRNGPIPVKYAWYLDLTSNRMFSLYDNYPTPGKTGLPLCELHGQQLELKETVVRDNEATEKSPPDHCWVCKM
Ga0224495_101220802	3300022208	Sediment	MTENAVPLFAWYLDITPNQMFSLYEYPIPGKTGLPLCSEHCRQLEQKEVVLYDEYATEASPPDHCWVCDT
Ga0124853_11583012	3300024056	Freshwater Wetlands	MPKSSYTVRTFAWFLDITPNAMFSLYEYPIAGKNGLPLCEKHGKQLELKEVVLYDREATELAPPDRCWVCEE
Ga0209642_105912571	3300025167	Soil	MFSWYLDLTPNQMFSLYKYPIPGKDGLPLYEEYGKQLEMKEVVLYNKEATDISPPFYCWVYKDXMYRQFLTVFL
Ga0209431_106297092	3300025313	Soil	FAWYLDITPSQMFSLYEYPIPGKDGLPLCKKHGKQLEVKELVDYDKEATEASPPNYCWVCKE
Ga0209392_10317142	3300027683	Freshwater Sediment	MNYSTKGDFAWYLDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDNDASEKYPPDHCWVCTG
Ga0209286_10013465	3300027713	Freshwater Sediment	MTEQSGGEFSWYLDITPNRMFSLYEYPKPGKDGSPLCEKHGRRLELKEVMASDREATEKAPPDHCRVCDT
Ga0209013_103290852	3300027858	Marine	LITVSIKKFFWHLDIIPNEMISLYDFPIPGKDRLPLCGEHGKKLEMLEVVIYNRVATELSPPDHCWVYED
Ga0209013_103580892	3300027858	Marine	LIKNFSWYLDITPNEMFSLYDYPIPGKDGLPLCKLHGKKLEMLEVVIFDREATELSPPDHCWVCGD
Ga0209013_105406261	3300027858	Marine	MKKFSWYLDITPNEMFSLYDYPIPGKDGLPLCEKHGKKLEMLEVVIFDREATELSSPDHCWVCGN
Ga0209013_106111642	3300027858	Marine	MKDLSEGRNLDITPNEMFSLYDYPVQGKDGLPLCEKHGKKLEMLEVVIYNREASVLSPPDHCWVCGD
Ga0209013_106695222	3300027858	Marine	MKKFSWYLDITPNEMFSLYDYPIPGKDGIPLCKKHGKKLEMLEVVIYDREATELSPPDHCWVCGD
Ga0209450_104570931	3300027885	Freshwater Lake Sediment	MMAQPDRNFAWYLDLTPNRMFSLYEYPIPGKDGLSLCEQHGRQLEMKEVMLYDEVATEKSPPDHCWVCKE
Ga0209450_109424263	3300027885	Freshwater Lake Sediment	MVMIYAWYLDLTPNHMFSLYGYPIPGKAGLPLCEQHGLQLELKEVVLYDEVATEKSPPDHCWVCKE
Ga0208980_102557143	3300027887	Wetland	PRFAWYLDITPNQMFSLYDYPIPGKNGLPLCQEHAKQLEMKEVVVLDQIATKLTPPDHCWVCEE
Ga0209254_100071516	3300027897	Freshwater Lake Sediment	MSQTTPTFSWYLDITPNQMFSLYEYPINGKNGLPLCKNHGMQLELKEVVLYDKDATVKSPPDH
Ga0209254_100630153	3300027897	Freshwater Lake Sediment	MGEVNIQFAWYIDITPNQMFSLYDYPIPGKSGLSLCQEHGKQLEMKEVVMLDQTATEMAPPDHC
Ga0209254_103433454	3300027897	Freshwater Lake Sediment	MIKFAWYLDLTPNRMFSLDDYPIPGKDGVPLCEQHGRQLEMKEVVLYDEEATEASPPDHCWVCREP
Ga0209254_104549152	3300027897	Freshwater Lake Sediment	MNKYALYLDITPNQMFSLYDYPIAGEIGLPLCVEYGQLLELKEVVLYDKQSTELAQPDHCWV
Ga0209254_105962431	3300027897	Freshwater Lake Sediment	MSQANTHGFSWYLEITPNQMFSLYDYPIPGKTGLSLCEVLGWLLELKEVVLFDKVTTELASPDHCWVCNDWL
Ga0209253_100602962	3300027900	Freshwater Lake Sediment	MTVYEPLKFAWYLDLTPIQMFSMYDYPIPGKDDLPLCEVHGRQIELKEVVLFDKAATEASPPNHCWVCKE
Ga0209536_1002575434	3300027917	Marine Sediment	MTEQSGGPFSWYLDITPNRMFSLYEYPVLGKDGLPLCQKHGKKLELKEVVVYDKEATETYPPDHCWVCKE
Ga0209391_104280992	3300027975	Freshwater Sediment	LFYSCPIKLVYTKHMNYSTKGDFAWYLDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDNDASEKYPPDHCWVCTG
Ga0299915_108203372	3300030613	Soil	MLAWYLDITPNQMFSLYDYPVPGKTGLPLCDEHGMQLEMKELVVYDEQATKLAPPDHC
Ga0315274_107064851	3300031999	Sediment	MRYDANGRFAWYLDITPNYMFSIGGYPTPGKDGIPLCQEHGRQLEMKEVVLYDAEATEAFPPDHCWVCEG
Ga0315277_100926862	3300032118	Sediment	MFALYLDITSNQMFSLYDYPIPGKSGLPLCQEHGKQLEMKEVVVLDQTATELAPPDHCWVCEE
Ga0315277_101173431	3300032118	Sediment	MGEGKIQFAWYLVITPNEMFSLDEYPIVGKRGIPLCKEHGQRLEMKEVVVLDRVATETAPPDHCWVCED
Ga0315277_115780581	3300032118	Sediment	MSKHANFEFAWYVDITPNHMFTLYDYPLIGKAGLPLCELHGNQLELKEVVLYDEAATLLAPPDHYWIC
Ga0315292_102423741	3300032143	Sediment	MSRFSWYLDITPNEMFSLDEYPIEGKRGIPLCQEHGRQLKMKEVVVLDQIETELAPPDHCCVCK
Ga0315292_110594802	3300032143	Sediment	MSKITKNNLAWYLSITPNRVFSLHEYSVPGKNGLPLCEEQGKQLELKEVVLYDKKATETRPPDHCWICKEDKRTILNAISLL
Ga0315281_103715434	3300032163	Sediment	FSFPLCDAKQPCIREYSWYLDITPNRMFSLYDSYPIAGKTGLPLCQLHGQHLELKEAVVRDNEATEKSPPDHCWVCEM
Ga0315283_123373682	3300032164	Sediment	VIAKINEFAWYLDITTNQMFSLYKYPVIGKAGLSLCELHGNQLELKEVVLYDEEATKLVQPDHCWVCEE
Ga0315275_107830142	3300032401	Sediment	MSKITKNNLAWYLSITPNRVFSLYEYSVPGKNGLPLCEEYGKQLELTEVVLYDKKATETRPPDHCWICKEDKRTILNAISLL
Ga0316605_121764512	3300033408	Soil	MDGYAIRKYAWFLDITPNAMFSLYEYPVIGKSGLPLCEEHGKQLAMKEVVLYDREATEFAPPDHCWV
Ga0316605_121813122	3300033408	Soil	MSGYTVRTFAWFLDITPNEMFSLYGYPIPNKNGLPLCEEHGQQLELKEVVLYKREVTEIAPLDHCWVCTE
Ga0316619_112282561	3300033414	Soil	MNSPTLFAWYLDLTPNQMFSLYDYPIPGKDGLPLCELDWQQLESKEVVLYDKETTELAPPEHCWVFE
Ga0316622_1025589251	3300033416	Soil	MSSYTVRTFAWFLDITPNEMFSLYEYPISGKSGLPLCEEHGRQLAMKEVVLYDKNATEMAPPDHCWVCEE
Ga0316625_1016635333	3300033418	Soil	TKGDFAWYLDITPNQMFSLYDYPVSGKDGLPLCDLHGRQLELKEVVLYDNDASEKYPPDHCWVCTG
Ga0316625_1025639582	3300033418	Soil	MSGYTVRTFAWFLDITLNGMFSLYEYPVLGKNGLPLCEEHGRQLELKEVVLCDREATEIAPPDHCWVCAE
Ga0316627_1006256701	3300033482	Soil	MNYSTKGGFAWYLDITPNQMFSLYDYPIPGKSGLPLCEEHGRQLELKEVVLYDKQATELAPPDQCWVCKE
Ga0316629_107039992	3300033483	Soil	MSQAAKNNFSWYLDITPNQMFSLYDYPVSGKDGLPLCELHGRQLELKEVVLYDNDASEKYPPDHCWVCTG
Ga0316626_104773992	3300033485	Soil	MDGYAIGKYAWFLDITPNAMFSLHEYPIPGKSGLPLCEEHGKQLAMKEVVLYDGEATELSPPDHCWVCEE
Ga0316630_121896121	3300033487	Soil	MNYSTKGGFAWYLDITPNQMFSLYDYPIPGKSGLPLCEEHGRQLELKEVVLYDKQATELAPPDQCWV
Ga0316628_1005382952	3300033513	Soil	MPEVMSQFAWYLDITPNQMFSLYDYPIPGKKGLPLCQVHGKQLEMKEVVVLDKTSTELALPDHCWVCEE
Ga0316617_1004033042	3300033557	Soil	MPTLQVNQYAWYLDITPNQMFSLYDYPIPGKSGLPLCEEHGRQLELKEVVLYDKQATELAPPDQCWVCKE
Ga0316617_1016790031	3300033557	Soil	MSSYIVRTFAWFLDITPNGMFSLYEYPIPGKNGLPLCEEHGQQLELKEVVLYDKEATELAPPDHCWVCEE

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters