Metagenome / Metatranscriptome Family F084297

Basic Information
Family ID	F084297
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	64 residues
Representative Sequence	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMAGNMTNATTANATSAGNMTGNISGFGPT
Number of Associated Samples	83
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	0.89 %
% of genes near scaffold ends (potentially truncated)	28.57 %
% of genes from short scaffolds (< 2000 bps)	74.11 %
Associated GOLD sequencing projects	74
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.34

Most Common Taxonomy
Group	Archaea (75.893 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment (22.321 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 51.09% β-sheet: 0.00% Coil/Unstructured: 48.91%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01656	CbiA	2.68
PF13614	AAA_31	2.68
PF10609	ParA	1.79
PF00353	HemolysinCabind	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	75.89 %
Unclassified	root	N/A	24.11 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	75.89 %
Unclassified	root	N/A	24.11 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	75.89 %
Unclassified	root	N/A	24.11 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	6.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Thaumarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Nitrososphaeria	class	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Nitrososphaerales	order	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Nitrososphaeraceae	family	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Nitrososphaera	genus	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	24.11 %
Candidatus Nitrososphaera evergladensis	species	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2162886007\|SwRhRL2b_contig_35595	All Organisms → cellular organisms → Archaea	1065	Open in IMG/M
2162886007\|SwRhRL2b_contig_76742	All Organisms → cellular organisms → Archaea	1532	Open in IMG/M
2209111006\|2214848844	Not Available	618	Open in IMG/M
3300000041\|ARcpr5oldR_c000988	All Organisms → cellular organisms → Archaea	3044	Open in IMG/M
3300000041\|ARcpr5oldR_c001902	All Organisms → cellular organisms → Archaea	2003	Open in IMG/M
3300000787\|JGI11643J11755_11736398	Not Available	593	Open in IMG/M
3300000890\|JGI11643J12802_10481574	Not Available	1082	Open in IMG/M
3300001431\|F14TB_101009543	Not Available	536	Open in IMG/M
3300002099\|JGI24808J26613_1003933	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	4194	Open in IMG/M
3300002100\|JGI24809J26612_1070209	Not Available	520	Open in IMG/M
3300002899\|JGIcombinedJ43975_10041438	Not Available	765	Open in IMG/M
3300004463\|Ga0063356_100177292	All Organisms → cellular organisms → Archaea	2477	Open in IMG/M
3300004479\|Ga0062595_100013447	All Organisms → cellular organisms → Archaea	2809	Open in IMG/M
3300005168\|Ga0066809_10028719	All Organisms → cellular organisms → Archaea	1166	Open in IMG/M
3300005169\|Ga0066810_10000453	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3703	Open in IMG/M
3300005269\|Ga0065706_1000736	All Organisms → cellular organisms → Archaea	1609	Open in IMG/M
3300005269\|Ga0065706_1001876	All Organisms → cellular organisms → Archaea	1619	Open in IMG/M
3300005277\|Ga0065716_1012286	Not Available	611	Open in IMG/M
3300005289\|Ga0065704_10095358	All Organisms → cellular organisms → Archaea	2491	Open in IMG/M
3300005289\|Ga0065704_10128961	All Organisms → cellular organisms → Archaea	1647	Open in IMG/M
3300005289\|Ga0065704_10393515	Not Available	760	Open in IMG/M
3300005294\|Ga0065705_10000862	All Organisms → cellular organisms → Archaea	1096	Open in IMG/M
3300005294\|Ga0065705_10125155	All Organisms → cellular organisms → Archaea	2719	Open in IMG/M
3300005294\|Ga0065705_11047976	Not Available	535	Open in IMG/M
3300005295\|Ga0065707_10895446	All Organisms → cellular organisms → Archaea	533	Open in IMG/M
3300005367\|Ga0070667_100018166	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae → Nitrososphaera → Candidatus Nitrososphaera evergladensis	5831	Open in IMG/M
3300005441\|Ga0070700_100116139	All Organisms → cellular organisms → Archaea	1786	Open in IMG/M
3300005441\|Ga0070700_101002844	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300005457\|Ga0070662_100194880	All Organisms → cellular organisms → Archaea	1604	Open in IMG/M
3300005549\|Ga0070704_100220320	All Organisms → cellular organisms → Archaea	1542	Open in IMG/M
3300005563\|Ga0068855_102581716	All Organisms → cellular organisms → Archaea	504	Open in IMG/M
3300005937\|Ga0081455_10026799	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	5293	Open in IMG/M
3300005937\|Ga0081455_10497417	All Organisms → cellular organisms → Archaea	820	Open in IMG/M
3300006358\|Ga0068871_100484498	All Organisms → cellular organisms → Archaea	1113	Open in IMG/M
3300006844\|Ga0075428_100080267	All Organisms → cellular organisms → Archaea	3560	Open in IMG/M
3300006844\|Ga0075428_100141818	All Organisms → cellular organisms → Archaea	2612	Open in IMG/M
3300006844\|Ga0075428_100850316	Not Available	969	Open in IMG/M
3300006847\|Ga0075431_100386575	All Organisms → cellular organisms → Archaea	1402	Open in IMG/M
3300006852\|Ga0075433_10620614	All Organisms → cellular organisms → Archaea	948	Open in IMG/M
3300009100\|Ga0075418_10203748	All Organisms → cellular organisms → Archaea	2107	Open in IMG/M
3300009147\|Ga0114129_11127299	All Organisms → cellular organisms → Archaea	981	Open in IMG/M
3300009147\|Ga0114129_11248228	All Organisms → cellular organisms → Archaea	923	Open in IMG/M
3300009148\|Ga0105243_11187982	All Organisms → cellular organisms → Archaea	775	Open in IMG/M
3300009156\|Ga0111538_11711044	All Organisms → cellular organisms → Archaea	792	Open in IMG/M
3300009795\|Ga0105059_1001487	All Organisms → cellular organisms → Archaea	1805	Open in IMG/M
3300010333\|Ga0134080_10513748	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300010336\|Ga0134071_10496716	Not Available	630	Open in IMG/M
3300010362\|Ga0126377_10049173	All Organisms → cellular organisms → Archaea	3667	Open in IMG/M
3300010399\|Ga0134127_12491789	All Organisms → cellular organisms → Archaea	597	Open in IMG/M
3300012477\|Ga0157336_1000693	All Organisms → cellular organisms → Archaea	1579	Open in IMG/M
3300012479\|Ga0157348_1009074	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300012483\|Ga0157337_1002969	All Organisms → cellular organisms → Archaea	997	Open in IMG/M
3300012495\|Ga0157323_1000243	All Organisms → cellular organisms → Archaea	2512	Open in IMG/M
3300012498\|Ga0157345_1053767	Not Available	519	Open in IMG/M
3300012961\|Ga0164302_10053431	All Organisms → cellular organisms → Archaea	2019	Open in IMG/M
3300013296\|Ga0157374_11886044	Not Available	623	Open in IMG/M
3300014969\|Ga0157376_11499165	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300015371\|Ga0132258_10782330	All Organisms → cellular organisms → Archaea	2405	Open in IMG/M
3300015371\|Ga0132258_11075222	All Organisms → cellular organisms → Archaea	2034	Open in IMG/M
3300015371\|Ga0132258_11696759	All Organisms → cellular organisms → Archaea	1593	Open in IMG/M
3300015371\|Ga0132258_13678732	All Organisms → cellular organisms → Archaea	1047	Open in IMG/M
3300015372\|Ga0132256_100379754	All Organisms → cellular organisms → Archaea	1512	Open in IMG/M
3300015373\|Ga0132257_101457892	All Organisms → cellular organisms → Archaea	872	Open in IMG/M
3300015373\|Ga0132257_102688590	All Organisms → cellular organisms → Archaea	648	Open in IMG/M
3300015374\|Ga0132255_103751015	All Organisms → cellular organisms → Archaea	646	Open in IMG/M
3300018027\|Ga0184605_10364759	All Organisms → cellular organisms → Archaea	652	Open in IMG/M
3300018027\|Ga0184605_10397516	Not Available	616	Open in IMG/M
3300018028\|Ga0184608_10100569	All Organisms → cellular organisms → Archaea	1207	Open in IMG/M
3300018031\|Ga0184634_10088011	All Organisms → cellular organisms → Archaea	1342	Open in IMG/M
3300018052\|Ga0184638_1007677	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	3585	Open in IMG/M
3300018052\|Ga0184638_1025949	All Organisms → cellular organisms → Archaea	2095	Open in IMG/M
3300018053\|Ga0184626_10020991	All Organisms → cellular organisms → Archaea	2650	Open in IMG/M
3300018061\|Ga0184619_10128695	All Organisms → cellular organisms → Archaea	1149	Open in IMG/M
3300018071\|Ga0184618_10060404	All Organisms → cellular organisms → Archaea	1402	Open in IMG/M
3300018072\|Ga0184635_10041174	All Organisms → cellular organisms → Archaea	1765	Open in IMG/M
3300018072\|Ga0184635_10049163	All Organisms → cellular organisms → Archaea	1625	Open in IMG/M
3300018072\|Ga0184635_10052471	All Organisms → cellular organisms → Archaea	1576	Open in IMG/M
3300018072\|Ga0184635_10400019	Not Available	520	Open in IMG/M
3300018073\|Ga0184624_10107560	All Organisms → cellular organisms → Archaea	1198	Open in IMG/M
3300018074\|Ga0184640_10343011	Not Available	677	Open in IMG/M
3300018075\|Ga0184632_10052945	All Organisms → cellular organisms → Archaea	1754	Open in IMG/M
3300018075\|Ga0184632_10270889	Not Available	739	Open in IMG/M
3300018076\|Ga0184609_10028690	All Organisms → cellular organisms → Archaea	2271	Open in IMG/M
3300018076\|Ga0184609_10047482	All Organisms → cellular organisms → Archaea	1823	Open in IMG/M
3300018076\|Ga0184609_10535058	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300018077\|Ga0184633_10526567	Not Available	569	Open in IMG/M
3300018081\|Ga0184625_10064516	All Organisms → cellular organisms → Archaea	1852	Open in IMG/M
3300018081\|Ga0184625_10129339	All Organisms → cellular organisms → Archaea	1315	Open in IMG/M
3300018081\|Ga0184625_10282993	Not Available	868	Open in IMG/M
3300018081\|Ga0184625_10304388	All Organisms → cellular organisms → Archaea	832	Open in IMG/M
3300019867\|Ga0193704_1013142	All Organisms → cellular organisms → Archaea	1674	Open in IMG/M
3300022534\|Ga0224452_1035410	All Organisms → cellular organisms → Archaea	1453	Open in IMG/M
3300022694\|Ga0222623_10031483	All Organisms → cellular organisms → Archaea	2013	Open in IMG/M
3300022694\|Ga0222623_10098850	All Organisms → cellular organisms → Archaea	1135	Open in IMG/M
3300022756\|Ga0222622_10966930	Not Available	625	Open in IMG/M
3300022756\|Ga0222622_11341376	Not Available	526	Open in IMG/M
3300025315\|Ga0207697_10007594	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota → Nitrososphaeria → Nitrososphaerales → Nitrososphaeraceae	4815	Open in IMG/M
3300025926\|Ga0207659_11119237	All Organisms → cellular organisms → Archaea	677	Open in IMG/M
3300025940\|Ga0207691_10086291	All Organisms → cellular organisms → Archaea	2816	Open in IMG/M
3300025960\|Ga0207651_11894350	Not Available	536	Open in IMG/M
3300025986\|Ga0207658_10832892	All Organisms → cellular organisms → Archaea	838	Open in IMG/M
3300026973\|Ga0207479_100526	All Organisms → cellular organisms → Archaea	1396	Open in IMG/M
3300027013\|Ga0209884_1003620	All Organisms → cellular organisms → Archaea	1336	Open in IMG/M
3300027523\|Ga0208890_1002401	All Organisms → cellular organisms → Archaea	2013	Open in IMG/M
3300027560\|Ga0207981_1004152	All Organisms → cellular organisms → Archaea	2570	Open in IMG/M
3300027873\|Ga0209814_10015962	All Organisms → cellular organisms → Archaea	3010	Open in IMG/M
3300028884\|Ga0307308_10581535	Not Available	537	Open in IMG/M
3300031082\|Ga0308192_1094595	Not Available	502	Open in IMG/M
3300031092\|Ga0308204_10315737	Not Available	528	Open in IMG/M
3300031421\|Ga0308194_10212073	Not Available	632	Open in IMG/M
3300031720\|Ga0307469_12087027	Not Available	551	Open in IMG/M
3300033412\|Ga0310810_10032209	All Organisms → cellular organisms → Archaea → TACK group → Thaumarchaeota	6395	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	58.93%
Host-Associated	Host-Associated	41.07%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	41.07%
Terrestrial	Environmental → Terrestrial	32.14%
Aquatic	Environmental → Aquatic	26.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	32.14%
Sediment	Environmental → Aquatic → Sediment	26.79%
Rhizoplane	Host-Associated → Plants → Rhizoplane	22.32%
Rhizosphere	Host-Associated → Plants → Rhizosphere	17.86%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified	26.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified	26.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	11.61%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.04%
Soil	Host-Associated → Plants → Rhizosphere → Soil	6.25%
Loam	Environmental → Terrestrial → Soil → Loam	3.57%
Sand	Environmental → Terrestrial → Soil → Sand	1.79%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	26.79%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	22.32%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	14.29%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	11.61%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.04%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	6.25%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	22.32%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	9.82%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	8.93%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere	5.36%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	4.46%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Switchgrass Rhizosphere	4.46%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	1.79%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Unplanted Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2162886007	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
2209111006	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300000041	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample from Arabidopsis cpr5 old rhizosphere	Host-Associated	Open in IMG/M
3300000787	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300001431	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU F1.4TB clc assemly	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300002899	Soil microbial communities from Manhattan, Kansas, USA - Combined assembly of Kansas soil 100-500um Nextera (ASSEMBLY_DATE=20140607)	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005168	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC	Environmental	Open in IMG/M
3300005169	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA	Environmental	Open in IMG/M
3300005269	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3 Bulk Soil	Environmental	Open in IMG/M
3300005277	Arabidopsis rhizosphere microbial communities from the University of North Carolina - sample Wild type Col-0	Host-Associated	Open in IMG/M
3300005289	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2	Host-Associated	Open in IMG/M
3300005294	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk Soil	Environmental	Open in IMG/M
3300005295	Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL3	Environmental	Open in IMG/M
3300005367	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005457	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG	Host-Associated	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005563	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2	Host-Associated	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009795	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_40_50	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010362	Tropical forest soil microbial communities from Panama - MetaG Plot_22	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300012477	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.3.yng.040610	Host-Associated	Open in IMG/M
3300012479	Unplanted soil (control) microbial communities from North Carolina - M.Soil.1.yng.030610	Environmental	Open in IMG/M
3300012483	Arabidopsis rhizosphere microbial communities from North Carolina - M.Col.4.yng.040610	Host-Associated	Open in IMG/M
3300012495	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.5.old.040610	Host-Associated	Open in IMG/M
3300012498	Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.3.yng.090410	Host-Associated	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300013296	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018031	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b1	Environmental	Open in IMG/M
3300018052	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b2	Environmental	Open in IMG/M
3300018053	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_60_b1	Environmental	Open in IMG/M
3300018061	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_60_b1	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018072	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018074	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_200_b2	Environmental	Open in IMG/M
3300018075	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_50_b1	Environmental	Open in IMG/M
3300018076	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_coex	Environmental	Open in IMG/M
3300018077	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3-1_170_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300019867	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U3m1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022694	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_coex	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025315	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025986	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026973	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-BECK01-C (SPAdes)	Environmental	Open in IMG/M
3300027013	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027523	Soil and rhizosphere microbial communities from Laval, Canada - mgHPA (SPAdes)	Environmental	Open in IMG/M
3300027560	Soil and rhizosphere microbial communities from Laval, Canada - mgLPC (SPAdes)	Environmental	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031082	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_193 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
SwRhRL2b_0206.00006880	2162886007	Switchgrass Rhizosphere	MLQTKTLIALSIVAALFFLTGVQVFSYAQMSNETSMAGNMTNATTANATSAGNMTGNISGFGPT
SwRhRL2b_0888.00003710	2162886007	Switchgrass Rhizosphere	MLKSRTLIALSIVAALFFMTGVQVFTYAQMSNETSMGGNMTNATMGNATGDANMTGNISGVGGGVG
2213892978	2209111006	Arabidopsis Rhizosphere	MQHTKTLIALSIVAALFFLMGAQVFTYTMPNATSMAGNMTNATMGNATMAGNMTGKVSGCTGGDRGC
ARcpr5oldR_0009883	3300000041	Arabidopsis Rhizosphere	MQHTKTLIALSIVAALFFLMGAQVFTYAMPNATSMAGNMTNATMGNATMAGNMTGKVSGCTGGDRGC*
ARcpr5oldR_0019022	3300000041	Arabidopsis Rhizosphere	MTMLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGNMTNATMANATSNDVNRTGNVSGLGIH*
JGI11643J11755_117363982	3300000787	Soil	MLKTTALIAISIVAVLFFLTGVQVFTYAQMSNDTSMGGNMTNATGANATSAGNMTGNVSGLGF*
JGI11643J12802_104815742	3300000890	Soil	MLKTTALIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAANATSGVNMTGNISGLGP*
F14TB_1010095432	3300001431	Soil	SIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAANATSGVNMTGNISGLGF*
JGI24808J26613_10039334	3300002099	Soil	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATAAGNMTGNISGFGPGH*
JGI24809J26612_10702091	3300002100	Soil	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNASSGVNMTGNVSGLGF*
JGIcombinedJ43975_100414382	3300002899	Soil	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATAANASSGVNMTGNISGVGPP*
Ga0063356_1001772922	3300004463	Arabidopsis Thaliana Rhizosphere	MLKTTALIAISIVAALFFLTGVQVFTYAQMSNDASMGGNMTNATAANATSGVNMTGNISGLGP*
Ga0062595_1000134472	3300004479	Soil	MNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0066809_100287191	3300005168	Soil	MLQTKTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATSAGNETGNISGLG
Ga0066810_100004534	3300005169	Soil	MLQTKTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATSAGNETGNISGLGAGTG*
Ga0065706_10007361	3300005269	Switchgrass Rhizosphere	MLKSRTLIALSIVAALFFMTGVQVFTYAQMSNETSMGGNMTNATMGNATGDANMTGNISGVGGGVG*
Ga0065706_10018761	3300005269	Switchgrass Rhizosphere	MLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATTANATSDVNMTGNVSGLGF*
Ga0065716_10122862	3300005277	Arabidopsis Rhizosphere	MQHTKTLIALSIVAALFFLMGAQVFTYTMPNATSMAGNMTNATMGNATMAGNMTGKVSGCTGGDRGC*
Ga0065704_100953582	3300005289	Switchgrass Rhizosphere	MLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSLGGNMTNATAGNATSGVNMTGNVSGLGF*
Ga0065704_101289612	3300005289	Switchgrass Rhizosphere	MLQTKTLIALSIVAALFFLTGVQVFSYAQMSNETSMAGNMTNATTANATSAGNMTGNISGFGPT*
Ga0065704_103935152	3300005289	Switchgrass Rhizosphere	SIVAALFFLTGVQVFSYAQMSNETSMGGNMTNATMGNATSGANMTGNISGLGGNAGT*
Ga0065705_100008621	3300005294	Switchgrass Rhizosphere	KSIHMLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATSGVNMTGNVSGLGF*
Ga0065705_101251553	3300005294	Switchgrass Rhizosphere	MLQTKTLIALSIVAALFFLTGVQVFSYAQMSNETSMAGNMTNATTANATSAGNITGNISGFGPT*
Ga0065705_110479761	3300005294	Switchgrass Rhizosphere	MLKTTTLMALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATSGANMTGNISGVGPTVG*
Ga0065707_108954461	3300005295	Switchgrass Rhizosphere	MLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSLGGNMTNATAGNATSGVNMTGNVSGLG
Ga0070667_1000181666	3300005367	Switchgrass Rhizosphere	MLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0070700_1001161391	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	NKSMNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0070700_1010028442	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MLNTRTLIALSIVAVLFFLTGAQVFTYAQMPNATSMAGNMTNATMANATSAGN
Ga0070662_1001948801	3300005457	Corn Rhizosphere	MNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGSMTNATIANATSAGNMSGNISGCDTRC*
Ga0070704_1002203202	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	LNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0068855_1025817161	3300005563	Corn Rhizosphere	MLNTRTLIALSIVAALFFLTGTQVFTYAQMPNATSMAGNMTNATMANATSAGNM
Ga0081455_100267995	3300005937	Tabebuia Heterophylla Rhizosphere	MLQTKTLIALSIVTALFFLTGVQVFSYAQMSNETSMGGNMTNATMGNATSAGNMTGNISGVGPIGG*
Ga0081455_104974171	3300005937	Tabebuia Heterophylla Rhizosphere	MLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATTANATSGVNMTGNVSGLGF*
Ga0068871_1004844981	3300006358	Miscanthus Rhizosphere	MLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGNMTNATMANATSNDVNRTGN
Ga0075428_1000802673	3300006844	Populus Rhizosphere	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATGAGNMTGNISGLGAGTG*
Ga0075428_1001418184	3300006844	Populus Rhizosphere	MLQTKTLIALTIVAALFFLTGVQVFSYAQMSNETSMAGNMTNATTANATSGANMTGNISGFGPT*
Ga0075428_1008503162	3300006844	Populus Rhizosphere	MLKTTTLIALSIVAALFFMTGVQVFTYAQMSNETSMGGNMTNATMGNATGDANMTGNISGVGGGVG*
Ga0075431_1003865752	3300006847	Populus Rhizosphere	MLKTSTLIALTIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATGAGNMTGNISGLGAGTG*
Ga0075433_106206142	3300006852	Populus Rhizosphere	MLQTKTLFALSVVAALFFLTGVQVFSYAQMSNETSMIGNMTNATMTNATSDMNMTGNISGHGGR*
Ga0075418_102037483	3300009100	Populus Rhizosphere	MLQTKTLIALTIVAALFFLIGVQVFSYAQMSNETSMAGNMTNATTANATSGANMTGNISGFGPT*
Ga0114129_111272992	3300009147	Populus Rhizosphere	MLQTKTLIALGVVAALFFLTGVQVFSYAQMSNETSMIGNMTNATMTNATSDMNMTGNISGHGGR*
Ga0114129_112482282	3300009147	Populus Rhizosphere	MLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATSGVNMTGNVSGLGF*
Ga0105243_111879821	3300009148	Miscanthus Rhizosphere	MNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATMANATSAGNMSGNISGCDTRC*
Ga0111538_117110442	3300009156	Populus Rhizosphere	YYKNKSMNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0105059_10014872	3300009795	Groundwater Sand	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATSGVNMTGNVSGLGF*
Ga0134080_105137481	3300010333	Grasslands Soil	MLQTRTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATSVGNM
Ga0134071_104967161	3300010336	Grasslands Soil	IHMLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATSGVNMTGNISGLGP*
Ga0126377_100491733	3300010362	Tropical Forest Soil	MWIALSIVVALFFLTGVQVFTYAQAPNMTSMAGNMTNATMANATSAGNMSGNISGCDTRC
Ga0134127_124917892	3300010399	Terrestrial Soil	MLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGN
Ga0157336_10006932	3300012477	Arabidopsis Rhizosphere	MNMLNTRTLIALSIVAALFFLTGAQVFTYAMPNATSMVGNMTNATMANATSAGNMSGNISGCDTRC*
Ga0157348_10090742	3300012479	Unplanted Soil	MLNTRTLIALSIVAALFFLTGAQVFTYAMPNATSMVGNMTNATMANATSAGNMSGNISGCDTRC*
Ga0157337_10029692	3300012483	Arabidopsis Rhizosphere	MNILNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATMGNATMAGNMTGKVSGCTGGDRGC*
Ga0157323_10002432	3300012495	Arabidopsis Rhizosphere	MLNTRTLIALSIVAALFFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC*
Ga0157345_10537671	3300012498	Arabidopsis Rhizosphere	SISMQHTKTLIALSIVAALFFLMGAQVFTYAMPNATSMAGNMTNATMGNATMAGNMTGKVSGCTGGDRGC*
Ga0164302_100534313	3300012961	Soil	MNMLNTRTLIALSIVAVLFFLTGAQVFTYVKMPNATSMAGNMTNATMANATSAGNMSGNISGCDTRC*
Ga0157374_118860441	3300013296	Miscanthus Rhizosphere	TLIALSIVAVLFFLTGAQVFTYAQMPNATSMAGNMTNATMANATSAGNMSGNISGCDTRC
Ga0157376_114991651	3300014969	Miscanthus Rhizosphere	MLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGNMTNATMANATSNDVNRTGNVSGLGIH*
Ga0132258_107823301	3300015371	Arabidopsis Rhizosphere	MLDTRTLIALSIVAALFFLTGAQVFTYAQMPNATSMAGNMTNATMANSTREGNMTGNISGLGIG*
Ga0132258_110752222	3300015371	Arabidopsis Rhizosphere	MLNTRALIALTIVAALFFLMGAQVFTYAMPNATSMAGNMTNATMANATSADVNRTGNVSGLTP*
Ga0132258_116967591	3300015371	Arabidopsis Rhizosphere	MLNTRTLIALSIVAALFFLTGAQVFTYAMPNSTSMAGNMTNATMANATSNDVNRTGNVSGLTP*
Ga0132258_136787321	3300015371	Arabidopsis Rhizosphere	MLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGNMTNATMANATSNDVNGTGNVSGLGIH*
Ga0132256_1003797543	3300015372	Arabidopsis Rhizosphere	MLNTRTLIALSIVAALFFLTGAQVFTYAMPNATSMVGNMTNATMANATSAGNMSGNISGCDT
Ga0132257_1014578921	3300015373	Arabidopsis Rhizosphere	NMLDTRTLIALSIVAALFFLTGAQVFTYAQMPNATSMAGNMTNATMANSTREGNMTGNISGLGIG*
Ga0132257_1026885901	3300015373	Arabidopsis Rhizosphere	MLNTRTLIALSIVAALLFLTGAQVFTYAQMPNATSMAGNMTNATMANATSDVNRTGNVSGLTP*
Ga0132255_1037510152	3300015374	Arabidopsis Rhizosphere	MLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGKMTNATMANATSNDVNRTGNVSGLGIH*
Ga0184605_103647591	3300018027	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVQVFSYAQMSNETSMGGNMTNATMANATSGVNMTGNISGLAP
Ga0184605_103975161	3300018027	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATSGANMTGNISGLGSPGT
Ga0184608_101005692	3300018028	Groundwater Sediment	MLKTTTLIALTIVAALFFLTGVQVFTYAQMPNDTSTGGNMTNATAGNATSGVNMTGNVSGLGF
Ga0184634_100880111	3300018031	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGVTPQ
Ga0184638_10076774	3300018052	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVQVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGLPDR
Ga0184638_10259493	3300018052	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATMAGNMTGNISGFGPGH
Ga0184626_100209913	3300018053	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGIEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGFGGGPE
Ga0184619_101286951	3300018061	Groundwater Sediment	MLKTTALIAISIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMANATSGVNMTGNISGLAP
Ga0184618_100604041	3300018071	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATSDVNMTGNISGISPQ
Ga0184635_100411741	3300018072	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGIEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGLAP
Ga0184635_100491631	3300018072	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATSGANMTGNISGYTPGQGGG
Ga0184635_100524712	3300018072	Groundwater Sediment	MLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATAGNATSGVNMTGNVSGLGF
Ga0184635_104000192	3300018072	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMAGNMTNATTANATSAGNMTGNISGFGPT
Ga0184624_101075602	3300018073	Groundwater Sediment	MLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAANATSAGNMTGNVSGLGF
Ga0184640_103430112	3300018074	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGVTPN
Ga0184632_100529451	3300018075	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGIEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGFGGGPGG
Ga0184632_102708892	3300018075	Groundwater Sediment	LGIVAALFFLTGVEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGLNPGVN
Ga0184609_100286902	3300018076	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATMAGNMTGNISGLGPGH
Ga0184609_100474822	3300018076	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGVQVFSYAQMSNESSMAGNMTNATIANPTIVANISCNISGAWPPTGTG
Ga0184609_105350581	3300018076	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVQVFSYAQMSNETSMGGNMTNATMGNATSGANMTGNISGYTPGQGGG
Ga0184633_105265672	3300018077	Groundwater Sediment	NMLQTKTLIALSIVAALFFLTGVEVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGLAP
Ga0184625_100645162	3300018081	Groundwater Sediment	MLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSTGGNMTNATAGNATSGVNMTGNVSGLGF
Ga0184625_101293392	3300018081	Groundwater Sediment	MLQTKTLIALSIVAALFFLTGVQVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGVTPQ
Ga0184625_102829931	3300018081	Groundwater Sediment	MLQTKTLITLSIVAALFFLTGVQVFSYAQMSNETSMGGNMTNATMGNATSGANMTGNISGYTPGQGGG
Ga0184625_103043881	3300018081	Groundwater Sediment	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATMAGNVTGNISGLGLGH
Ga0193704_10131422	3300019867	Soil	MQNTRTLIALSIVAALFFLTGVEVFSYAQMSNETSMGGNMTNATMGNATSAGNMTGNISGMGAGTG
Ga0224452_10354102	3300022534	Groundwater Sediment	MLKTTTLIALTIVAALFFLTGVQVFTYAQMSNDTSTGGNMTNATAGNATSGVNMTGNVSGLGF
Ga0222623_100314831	3300022694	Groundwater Sediment	LKTRTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATMAGNMTGNISGFGPGH
Ga0222623_100988501	3300022694	Groundwater Sediment	MLQTKTLIALGIVAALFFLTGVQVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGVGPGIN
Ga0222622_109669302	3300022756	Groundwater Sediment	TNMLQTKTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATSDVNMTGNISGISPQ
Ga0222622_113413761	3300022756	Groundwater Sediment	QTKTLIALSIVAALFFLIGVQVFSYAQMSNETSMAGNMTNATTANATSAGNMTGNISGFGPT
Ga0207697_100075945	3300025315	Corn, Switchgrass And Miscanthus Rhizosphere	MNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC
Ga0207659_111192372	3300025926	Miscanthus Rhizosphere	MLNTRTLIALSIVAALFFLTGTQVFTYAQMPNATSMAGNMTNATMANATSAGNMSGNISG
Ga0207691_100862913	3300025940	Miscanthus Rhizosphere	MTMLNTKALIALTIVAALFFLTGVQVFSYAQMPNATSMAGNMTNATMANATSNDVNRTGNVSGLGIH
Ga0207651_118943501	3300025960	Switchgrass Rhizosphere	FIYYKNKSMNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC
Ga0207658_108328921	3300025986	Switchgrass Rhizosphere	YYKNKSMNMLNTRTFIALSIVAALLFLTGAQVFTYAMPNATSMVGNMTNATIANATSAGNMSGNISGCDTRC
Ga0207479_1005263	3300026973	Soil	MLKTTALIAISIVAALFFLTGVQVFTYAQMSNDASMGGNMTNATAANATSGVNMTGNISGLGPXYG
Ga0209884_10036201	3300027013	Groundwater Sand	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATAGNATSGVNMTGNVSGLGF
Ga0208890_10024013	3300027523	Soil	MLKTRTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATSAGNETGNISGLGAGTG
Ga0207981_10041522	3300027560	Soil	MLQTKTLIALSIVAALFFLTGIQVFTYAQMSNETSMGGNMTNATMGNATSAGNETGNISGLGAGTG
Ga0209814_100159622	3300027873	Populus Rhizosphere	MLKTTTLIALSIVAALFFLTGVQVFTYAQMSNETSMGGNMTNATMGNATGAGNMTGNISGLGAGTG
Ga0307308_105815352	3300028884	Soil	HMQNTRTLIALSIVAALFFLTGVEVFSYAQMSNETSMGGNMTNATMGNATSAGNMTGNISGMGAGTG
Ga0308192_10945952	3300031082	Soil	LIALSIVAALFFLTGVEVFSYAQMSNETSMGGNMTNATMGNATSAGNMTGNISGMGAGTG
Ga0308204_103157371	3300031092	Soil	KTLIALSIVAALFFLTGVQVFTFAQMPNDTSMAGNMTNATMANATSGVNMTGNISGVGPGIN
Ga0308194_102120732	3300031421	Soil	QNTRTLIALSIVAALFFLTGVEVFSYAQMSNETSMGGNMTNATMGNATSAGNMTGNISGMGAGTG
Ga0307469_120870271	3300031720	Hardwood Forest Soil	MLKTTTLIAISIVAALFFLTGVQVFTYAQMSNDTSMGGNMTNATTANATSDVNMTGNVSGLGF
Ga0310810_100322094	3300033412	Soil	MLNTRTLIALSIVAALLFLTGAQVFTYAMPNATSMAGNMTNATMANATSDVNRTGNVSGLTP

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.34
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.34
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084297

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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