NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome / Metatranscriptome Family F084293

Metagenome / Metatranscriptome Family F084293

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F084293
Family Type Metagenome / Metatranscriptome
Number of Sequences 112
Average Sequence Length 98 residues
Representative Sequence MADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGTAPTSIPT
Number of Associated Samples 109
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Unclassified
% of genes with valid RBS motifs 95.60 %
% of genes near scaffold ends (potentially truncated) 80.36 %
% of genes from short scaffolds (< 2000 bps) 81.25 %
Associated GOLD sequencing projects 103
AlphaFold2 3D model prediction Yes
3D model pTM-score0.44

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Unclassified (94.643 % of family members)
NCBI Taxonomy ID N/A
Taxonomy N/A

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil
(23.214 % of family members)
Environment Ontology (ENVO) Unclassified
(26.786 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(54.464 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: Yes Secondary Structure distribution: α-helix: 19.67%    β-sheet: 11.48%    Coil/Unstructured: 68.85%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.44
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF13641Glyco_tranf_2_3 0.89



 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
UnclassifiedrootN/A94.64 %
All OrganismsrootAll Organisms5.36 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300002873|Ga0006865J43189_105360All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus644Open in IMG/M
3300003570|Ga0007418J51697_1022208All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus660Open in IMG/M
3300004104|Ga0058891_1022933Not Available593Open in IMG/M
3300004134|Ga0058906_1346786Not Available646Open in IMG/M
3300004136|Ga0058889_1435424Not Available544Open in IMG/M
3300004138|Ga0058905_1022390Not Available599Open in IMG/M
3300004140|Ga0058894_1441593Not Available611Open in IMG/M
3300004294|Ga0068945_1184901Not Available692Open in IMG/M
3300004467|Ga0068978_1223366Not Available668Open in IMG/M
3300004470|Ga0068967_1002425Not Available555Open in IMG/M
3300004471|Ga0068965_1332150Not Available597Open in IMG/M
3300004471|Ga0068965_1335425Not Available554Open in IMG/M
3300004506|Ga0068973_1145615Not Available580Open in IMG/M
3300004558|Ga0068979_1196809Not Available590Open in IMG/M
3300004593|Ga0068946_1228347Not Available618Open in IMG/M
3300004599|Ga0068933_1267748Not Available604Open in IMG/M
3300004600|Ga0068964_1002803Not Available640Open in IMG/M
3300004607|Ga0068948_1000307Not Available525Open in IMG/M
3300004612|Ga0068961_1373693Not Available746Open in IMG/M
3300004785|Ga0058858_1422422Not Available571Open in IMG/M
3300004800|Ga0058861_10041026Not Available568Open in IMG/M
3300005329|Ga0070683_102363522Not Available510Open in IMG/M
3300005337|Ga0070682_100898259Not Available728Open in IMG/M
3300005533|Ga0070734_10879713Not Available508Open in IMG/M
3300005538|Ga0070731_10415385All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300005650|Ga0075038_11041315Not Available628Open in IMG/M
3300006028|Ga0070717_11030318Not Available750Open in IMG/M
3300006050|Ga0075028_100995667Not Available521Open in IMG/M
3300006358|Ga0068871_100918346Not Available812Open in IMG/M
3300006881|Ga0068865_101223001Not Available665Open in IMG/M
3300007526|Ga0075022_1708990Not Available628Open in IMG/M
3300009098|Ga0105245_11066837Not Available853Open in IMG/M
3300010077|Ga0127437_153309Not Available609Open in IMG/M
3300010113|Ga0127444_1077909Not Available575Open in IMG/M
3300010141|Ga0127499_1185179Not Available501Open in IMG/M
3300010866|Ga0126344_1357374Not Available679Open in IMG/M
3300011027|Ga0138580_122710Not Available522Open in IMG/M
3300011042|Ga0138586_100222Not Available660Open in IMG/M
3300011050|Ga0138571_115377Not Available529Open in IMG/M
3300011051|Ga0138540_101351Not Available655Open in IMG/M
3300011060|Ga0138583_1110332Not Available618Open in IMG/M
3300011069|Ga0138592_1098778Not Available548Open in IMG/M
3300011070|Ga0138567_1026499Not Available508Open in IMG/M
3300011080|Ga0138568_1165902Not Available793Open in IMG/M
3300012374|Ga0134039_1037138Not Available500Open in IMG/M
3300013100|Ga0157373_11232986Not Available564Open in IMG/M
3300014501|Ga0182024_11014961All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales988Open in IMG/M
3300014969|Ga0157376_11414843Not Available727Open in IMG/M
3300019165|Ga0184589_116626Not Available602Open in IMG/M
3300019190|Ga0184600_118521Not Available692Open in IMG/M
3300019194|Ga0184586_146392Not Available677Open in IMG/M
3300019258|Ga0181504_1176056Not Available637Open in IMG/M
3300019273|Ga0187794_1163515Not Available600Open in IMG/M
3300020075|Ga0206349_1255516Not Available573Open in IMG/M
3300020076|Ga0206355_1377577Not Available522Open in IMG/M
3300020081|Ga0206354_11297930Not Available632Open in IMG/M
3300021474|Ga0210390_11055587Not Available662Open in IMG/M
3300021909|Ga0213846_1111203Not Available626Open in IMG/M
3300021951|Ga0222624_1399800Not Available623Open in IMG/M
3300021967|Ga0213848_1097380Not Available629Open in IMG/M
3300022499|Ga0242641_1047366Not Available513Open in IMG/M
3300022500|Ga0242643_107683Not Available739Open in IMG/M
3300022501|Ga0242645_1010951Not Available718Open in IMG/M
3300022508|Ga0222728_1106625Not Available537Open in IMG/M
3300022708|Ga0242670_1044130Not Available617Open in IMG/M
3300022714|Ga0242671_1030088Not Available815Open in IMG/M
3300023551|Ga0247546_103258Not Available629Open in IMG/M
3300025907|Ga0207645_10668197Not Available706Open in IMG/M
3300025914|Ga0207671_11248244Not Available580Open in IMG/M
3300025927|Ga0207687_10892401Not Available761Open in IMG/M
3300026023|Ga0207677_12163366Not Available517Open in IMG/M
3300026142|Ga0207698_11355831Not Available726Open in IMG/M
3300030545|Ga0210271_10905906Not Available740Open in IMG/M
3300030738|Ga0265462_12099499Not Available553Open in IMG/M
3300030740|Ga0265460_11885598Not Available617Open in IMG/M
3300030741|Ga0265459_11989733Not Available695Open in IMG/M
3300030743|Ga0265461_11528091Not Available724Open in IMG/M
3300030805|Ga0265756_109607Not Available613Open in IMG/M
3300030813|Ga0265750_1049648Not Available632Open in IMG/M
3300030846|Ga0075403_11545388Not Available571Open in IMG/M
3300030905|Ga0308200_1153635Not Available534Open in IMG/M
3300030923|Ga0138296_1850641Not Available625Open in IMG/M
3300031057|Ga0170834_102328782Not Available500Open in IMG/M
3300031421|Ga0308194_10357157Not Available522Open in IMG/M
3300031525|Ga0302326_11183208All Organisms → cellular organisms → Bacteria → Acidobacteria1054Open in IMG/M
3300031910|Ga0306923_12522201Not Available506Open in IMG/M
3300031938|Ga0308175_100837902All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia1008Open in IMG/M
3300031955|Ga0316035_109642Not Available716Open in IMG/M
3300031996|Ga0308176_11914338Not Available633Open in IMG/M
3300032119|Ga0316051_1016732Not Available649Open in IMG/M
3300032120|Ga0316053_115046Not Available573Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil23.21%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil17.86%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil15.18%
Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil4.46%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil3.57%
WatershedsEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Watersheds2.68%
PeatlandEnvironmental → Aquatic → Freshwater → Wetlands → Bog → Peatland2.68%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere2.68%
PalsaEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa2.68%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.79%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere1.79%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Groundwater SedimentEnvironmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment0.89%
WatershedsEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil0.89%
PeatlandEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland0.89%
Permafrost SoilEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost Soil0.89%
PermafrostEnvironmental → Terrestrial → Soil → Wetlands → Permafrost → Permafrost0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Boreal Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300002873Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome, Counting Only)EnvironmentalOpen in IMG/M
3300003570Grassland soil microbial communities from Hopland, California, USA - Sample H2_Bulk_34 (Metagenome Metatranscriptome, Counting Only)Host-AssociatedOpen in IMG/M
3300004104Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF218 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004134Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF248 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004136Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF214 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004138Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF246 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004140Forest soil microbial communities from Harvard Forest Long Term Ecological Research site in Petersham, Massachusetts, USA - MetaT HF224 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004294Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 33 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004467Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 75 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004470Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 59 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004471Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 57 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004473Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004476Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 58 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004478Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 69 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004506Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 70 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004558Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004592Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 26 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004593Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 34 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004598Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 72 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004599Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004600Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004607Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 36 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004612Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300004785Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - roots SR-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300004800Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-1 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005337Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaGEnvironmentalOpen in IMG/M
3300005533Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1EnvironmentalOpen in IMG/M
3300005538Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1EnvironmentalOpen in IMG/M
3300005650Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Organic soil replicate RNA 2013_055 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300006028Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaGEnvironmentalOpen in IMG/M
3300006050Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014EnvironmentalOpen in IMG/M
3300006358Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300007526Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaT_CSR_2012 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300010077Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010113Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_24_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010141Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010866Boreal forest soil eukaryotic communities from Alaska, USA - C1-3 Metatranscriptome (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300011027Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 70 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011042Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 76 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011050Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 56 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011051Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 21 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011060Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 73 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011069Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 19 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011070Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 52 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300011080Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 53 (Metagenome Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300012374Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_8_2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300013100Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C6-5 metaGHost-AssociatedOpen in IMG/M
3300014501Permafrost microbial communities from Stordalen Mire, Sweden - P3-2 metaG (Illumina Assembly)EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300018034Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_10EnvironmentalOpen in IMG/M
3300019164Soil microbial communities from Bohemian Forest, Czech Republic ? CSI3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019165Soil microbial communities from Bohemian Forest, Czech Republic ? CSA1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019185Soil microbial communities from Bohemian Forest, Czech Republic ? CSE2 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019190Spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic ? CZE3 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019194Soil microbial communities from Bohemian Forest, Czech Republic ? CSE1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019230Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin01_30_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019258Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin05_10_metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300019273Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300020075Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020076Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-2 (Metagenome Metatranscriptome) (v3)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021474Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-OEnvironmentalOpen in IMG/M
3300021909Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - NH:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021951Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300021967Metatranscriptome of freshwater microbial communities from post-fracked creek in Pennsylvania, United States - AB:C (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022499Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-14-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022500Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022501Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-7-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022508Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-19-M (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300022523Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-17-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022708Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022714Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-O (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023551Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300025907Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025914Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300030545Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO142-VCO033SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030605Metatranscriptome of forest soil microbial communities from Boreal Montmorency Forest, Quebec, Canada - FO144-ARE042SO (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030738Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VDE Co-assemblyEnvironmentalOpen in IMG/M
3300030740Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ARE Co-assemblyEnvironmentalOpen in IMG/M
3300030741Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada ANR Co-assemblyEnvironmentalOpen in IMG/M
3300030743Forest Soil Metatranscriptomes Boreal Montmorency Forest, Quebec, Canada VCO Co-assemblyEnvironmentalOpen in IMG/M
3300030805Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030813Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030824Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030835Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLU1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030846Forest soil microbial communities from France for metatranscriptomics studies - Site 11 - Champenoux / Amance forest - FB5 EcM (Eukaryote Community Metatranscriptome)EnvironmentalOpen in IMG/M
3300030877Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030905Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_204 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030923Forest soil microbial communities from Spain - ITS-tags Site 9-Mixed-thinned forest site A3_MS_autumn Metatranscriptome (Eukaryote Community Metatranscriptome) (version 2)EnvironmentalOpen in IMG/M
3300030941Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA4 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300030976Metatranscriptome of plant litter microbial communities from Maridalen valley, Oslo, Norway - NLA6 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031010Metatranscriptome of rhizosphere microbial communities from Maridalen valley, Oslo, Norway - NZE2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031057Oak Coassembly Site 11 - Champenoux / Amance forestEnvironmentalOpen in IMG/M
3300031236Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_1EnvironmentalOpen in IMG/M
3300031421Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031525Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3EnvironmentalOpen in IMG/M
3300031868Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLA1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031938Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1EnvironmentalOpen in IMG/M
3300031955Spruce litter microbial communities from Bohemian Forest, Czech Republic ? CLE1 metaT (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300031996Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R2EnvironmentalOpen in IMG/M
3300032119Metatranscriptome of soil microbial communities from Bohemian Forest, Czech Republic ? CSE5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300032120Metatranscriptome of spruce rhizosphere microbial communities from Bohemian Forest, Czech Republic - CZA5 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Ga0006865J43189_10536013300002873Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDCVTTSG
Ga0007418J51697_102220813300003570Avena Fatua RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGTAPTSIPTEASLLVNDCT
Ga0058891_102293313300004104Forest SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVQGAAITSRQLYTGTAPTSLPTEA
Ga0058906_134678613300004134Forest SoilMADFRKMLFVLAGLMILFIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILINCAGTLFGAQTGSQTLSLYVSGAAITSRQLYTGTAPTSIPTEAALLVN
Ga0058889_143542413300004136Forest SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLLGAQTGPQTLTVYPNGTT
Ga0058905_102239013300004138Forest SoilMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLLGAQTGPQTLSLFVNGAAITSRQLYSGTSVPSSIPT
Ga0058894_144159313300004140Forest SoilMADFRKMLFVLAGLLIIIGTASAQTTCIAFVANQPIMRQEGAAEPAGDIVINCSGTPSAIQQATNQTVTLYASATITSRLLVSSSSTI
Ga0068945_118490113300004294Peatlands SoilMADFRKMLFVLVGLLIVISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYTG
Ga0068978_122336613300004467Peatlands SoilLKKNFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDCVTTS
Ga0068967_100242513300004470Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPILRQEGATEPAGDIQITCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGS
Ga0068965_133215013300004471Peatlands SoilMADFRKMLFVLVGLLIVISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYTGTQPSSIPTEAALLVNDCTSNSGTSSSG
Ga0068965_133542513300004471Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGS
Ga0068919_103820813300004473Peatlands SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGITEPAGDVILTCTGVPLGAQLQSQTLTLYVQGTTITSRQLYSGTSAPASI
Ga0068966_100124213300004476Peatlands SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGITEPAGDVILTCSGTPLGAQLQSQTITLYVQGTSITSRQLYSGTSAPNSSSIPTEAALLVNDCTSNT
Ga0068972_101756413300004478Peatlands SoilMADFRKMLFVLAGLMILIGTASAQNGVTCTAFVANQPTLRQEGVTEPAGDIIIQCSGALVGAQTGSQTLSLYVNGTSITSRQLYSGSTVPT
Ga0068973_114561513300004506Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTE
Ga0068979_119680913300004558Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDCV
Ga0068938_122449313300004592Peatlands SoilMADFRKMLFVLAGLMILIGTASAQNGVTCTAFVANQPTLRQEGVTEPAGDIIIQCSGALVGAQLGSQTLSLYVNGTT
Ga0068946_122834713300004593Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPT
Ga0068975_100104713300004598Peatlands SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGITEPAGDVILTCSGVPLGAQLLSQTLTFYVQGTTITSRQLY
Ga0068933_126774813300004599Peatlands SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDC
Ga0068964_100280323300004600Peatlands SoilMADFRKMLFVLVGLLILISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYT
Ga0068948_100030713300004607Peatlands SoilMADFRKMLFVLAGLMILIGTASAQNGVTCTSFVANQPTLRQEGVTEPAGDIIIQCQGALVGAQTGSQTLSLYINGAAITSRQLY
Ga0068961_137369313300004612Peatlands SoilMADFRKMLFVLVGLLIVISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYTGTQPSSIPTEAA
Ga0058858_142242213300004785Host-AssociatedMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQTGPQTLSLYVNGASITSRQLYT
Ga0058861_1004102613300004800Host-AssociatedMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQL
Ga0070683_10236352213300005329Corn RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCQGTLIGAQTGPQTLSLYVNGASITSRQLY
Ga0070682_10089825913300005337Corn RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQTGPQTLSLYVNGASITSRQLFTGSAPTSIPTEAALLVN
Ga0070734_1087971313300005533Surface SoilMADFRKMLFVLAGLLILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGPQTLSLYVSGAAITSRQLYTGSAPTSIPTEAALLVNDCTTNSG
Ga0070731_1041538523300005538Surface SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPILRQEGVTEPAGDIQITCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGTAPTSIPTEAALLVN
Ga0075038_1104131513300005650Permafrost SoilMADFRKMLFAFAGLVTLISSASAQSTSPLTCTAFVANQPIMRQEGQTEPAGDIIIQCSGILVGAQTGAQTLSLYVAGAAITSRQLFTGTAPASIPTEAALLVNDVATTATQGFLQNGALVFS
Ga0070717_1103031813300006028Corn, Switchgrass And Miscanthus RhizosphereMADFRKMLFVLAGLLIIIGTASAQTTCIAFVANQPIMRQEGGTEPAGDIVINCTGTPSAIQQAGNQTVTLYASAAITSRALVTSGLAWTDAALFINDTGTP
Ga0075028_10099566713300006050WatershedsMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVQGAAITSRQLYTGSAPTSI
Ga0068871_10091834613300006358Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGSAPTSIPTEAALLVNDCT
Ga0068865_10122300113300006881Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGTAPTSIPTEASLL
Ga0075022_170899013300007526WatershedsLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGQLVGAQTGPQTLSLYVQGAAITSRQLYTGSAPTSIPTEAALLVNDCTTNSGVSSSGGSCAPS
Ga0105245_1106683713300009098Miscanthus RhizosphereLTRNSFKFGALLSTLIQIAPVALAETGVTCVAFVANQPTLRQEGMAEAAPDVLISCSGTLSSSQTGPQTLTLSVNNAAITSRQLYSGTRPSSIPTEAAL
Ga0127437_15330913300010077Grasslands SoilLEENFDRFTHDNFKEKEMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILITCSGTLIGAQTGSQTLSLYVNGAPITSRQLFTGTAPNGGASLP
Ga0127444_107790913300010113Grasslands SoilLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQLGAQTLSLYVNGAAITSRQLYTGTAP
Ga0127499_118517913300010141Grasslands SoilLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGVLQGAQTGPQTLSLYVNGAAIT
Ga0126344_135737413300010866Boreal Forest SoilLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQLGPQTLSLYVNGASITSRQLYTGTAPTSIPTEAALLVNDCTSTSGLTSGGASCAAISN
Ga0138580_12271013300011027Peatlands SoilLKKNFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTE
Ga0138586_10022213300011042Peatlands SoilLKKNFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDCV
Ga0138571_11537713300011050Peatlands SoilMADFRKMLFVLVGLLIVISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYT
Ga0138540_10135113300011051Peatlands SoilMRLRLKENFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDC
Ga0138583_111033213300011060Peatlands SoilMRLRLKENFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIQISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPTEAALLVNDCTTT
Ga0138592_109877813300011069Peatlands SoilMRLRLKENFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPILRQEGATEPAGDIQITCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSSAPSSNPT
Ga0138567_102649913300011070Peatlands SoilLKENFDRFTHDNFKEKEMADFRKMLFVLVGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPGGDILITCTGTLVGAQTGPQTLTLYVSGAQITSR
Ga0138568_116590213300011080Peatlands SoilLKENFDRFTHDNFKEKEMADFRKMLFVLVGLLIVISTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLIGAQTGQQTLTLYVSGAAITSRQLYTGTQPSSIPTEAAFLVNDCTSNSGTSSSG
Ga0134039_103713813300012374Grasslands SoilLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLIGAQTGPQTLSLYVSGAAITSRQLF
Ga0157373_1123298613300013100Corn RhizosphereLKENFDRFTHDNFKEKEMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCMGTLIGAQTGPQTLSLYVSGAAITSR
Ga0182024_1101496113300014501PermafrostLKENFDRFTHDNFKEKEMADFRKMLFVLAGLMILIGTASAQTGLTCTAFVANQPTLRQEGVTEPAGDTLINCSGTLVGAQFGSQTLSLYVNGAAITSRQLYTGSAPSSIPTEAAVLINDCTTTTVGPSPTPGGTCGP
Ga0157376_1141484313300014969Miscanthus RhizosphereLKKNFDRFTHDNFKEKEMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGAQTLSLYVNGASITSRQLYTGSAP
Ga0187863_1026333423300018034PeatlandMADFRKMFFVLAALVMIIGVAVPASAQVQCTAFVANQPTLRQEGITEPAGDVILTCSGVPLGAQLLSQTLTLYVQGTTITSRQLYSGT
Ga0184582_10415113300019164SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGLTEPAGDVIITCTGTPIGAQTGSQTLSLYVNGTSITSRQLYSGTSAPTSIP
Ga0184589_11662613300019165SoilMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGAQTLSLYVNGAAITSRQTYTGTAPSSIPTEAA
Ga0184587_13656013300019185SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGLTEPAGDVIITCTGTPIGAQTGSQTLSLYVNGTSIT
Ga0184600_11852113300019190SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGLTEPAGDVIITCTGTPIGAQTGSQTLSLYVNGTSITSRQLYSGTSAPTSIPTEAALLVNDCVTNGIASSSFPTFV
Ga0184586_14639213300019194SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGVTEPAGDVIITCTGALVGAQTGSQTLSLYVNGTTITSRQLYSGTSAPTSIPTEAALLVNDNVTGAAVN
Ga0181501_114309413300019230PeatlandMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGITEPAGDVILTCTGVPIGAQTGSQTLSLYVNGTTITS
Ga0181504_117605613300019258PeatlandMADFRKMFFVFAALVMIMAIPASAQVTCVAFVANQPTLRQEGLTEPAGDIILTCTGNPIGAQLQSQTLSLYVQGTAITSRQLYTGTAPSSIPTEAALLVEDCVSPSSN
Ga0187794_116351513300019273PeatlandMADFRKMLFVLVGLLVVIGTASAQTGVTCTAFVANQPTLRQEGITEPAGDILISCSGTLIGAQTGPQTLTLYVSGAAITSRQLYT
Ga0206349_125551613300020075Corn, Switchgrass And Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGTAPT
Ga0206355_137757713300020076Corn, Switchgrass And Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLHGTGTT
Ga0206354_1129793013300020081Corn, Switchgrass And Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTGTAPTSIPT
Ga0210390_1105558713300021474SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGQLVGAQTGSQTLSLYVNGAAITSRQLYTGTTVPSSIPTEAALLVND
Ga0213846_111120313300021909WatershedsMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVQGAAITSRQLYTGTAPTS
Ga0222624_139980013300021951Groundwater SedimentMADFRKMLFVLAGLLILISTASAQTGVTCTGFVANQPTLRQEGTTEPGGDILINCAGTLLGAQTGSQTLSLYVNGAAITSRQLYTGTAPT
Ga0213848_109738013300021967WatershedsMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVQGAAITSRQLYTGTAPTSLP
Ga0242641_102180413300022499SoilMADFRKMFFVFAALVMIMAIPASAQITCVAFVANQPTLRQEGATEPAGDILISCSGTLIGAQLGPQTLSLYVNGAAVTSRQLYTSSSAPSSIPTEAAILVNDNTSTGVQGFLQN
Ga0242641_104736613300022499SoilMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLVGAQTGPQTLSLYVSGAAITSRQLYTGSAPTSIPTEAALLVNDCTTNTGVSSSGGSCVPAGTFTGGVP
Ga0242643_10768313300022500SoilMADFRKMLFVLAGLLILIGTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLLGAQTGPQTLSLFVNGAAITSRQLYSGTSAPSSIPTEAAVLINDCTTNSGPSPNGSGFICSQGPTQGFLQN
Ga0242645_101095113300022501SoilMADFRKVLFVLAGLVILISTASAQTPILTCTAFVANQPTLRQEGTTEPAGDILISCSATSLPLAGAQAQAQTLSLYVNGAAITSRQLYSGTTVPSSIPTEAALLVNDNATAAPINGASPPTQGF
Ga0222728_110662513300022508SoilMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLLGAQTGPQTLSLFVNGAAITSRQLYSGTSVPSSIPTEA
Ga0242663_110449823300022523SoilFDRFTHDNFKEKEMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSQPTSSPT
Ga0242670_104413013300022708SoilMADFRKMLFVLAGLLILIGTASAQTGVTCTAFVANQPLLRQEGTTEPAGDIIIQCSGVPVGAQTQSQTLSLYVNGTTITSRQLYTGTAPTSIPTEAAVLVN
Ga0242671_103008813300022714SoilMADFRKVLFVLAGLVILISTASAQTPILTCTAFVANQPTLRQEGTTEPAGDILISCSATSLPLSGAAAGPQTLSLYVNGAAITSRQLYSGTTVPSSIP
Ga0247546_10325813300023551SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTG
Ga0207645_1066819713300025907Miscanthus RhizosphereMADIRKMLFVLAGLLIIISTASAQTGVTCTGFVANQPTLRQEGTTEPGGDILINCAGTLLGAQTGSQTLSLYVNGAAITSRQLF
Ga0207671_1124824413300025914Corn RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLQGAQTGPQTLSLYVNGAAITSRQLYTG
Ga0207687_1089240113300025927Miscanthus RhizosphereMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLSLYVSGAAITSRQLFTG
Ga0207677_1216336613300026023Miscanthus RhizosphereMADIRKMLFVLAGLLIIISTASAQTGVTCTGFVANQPTLRQEGTTEPGGDILINCAGTLLGAQTGSQTLSLYVNGAAITSRQLFT
Ga0207698_1135583113300026142Corn RhizosphereMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILITCNGTLQGAQLGPQTLSLYVNGAAITSRQLYSGSAPTSIPTEAALLVND
Ga0210271_1090590613300030545SoilMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLLGAQTGPQTLTLYVSGAAIT
Ga0210265_115717613300030605SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGLTEPAGDVINTCTGTPIGAQTGSQTLSLYVNGTSITSRQLYSGTSAPTSIPTEAALLVN
Ga0265462_1209949913300030738SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDIIIQCSGALVGAQLGSQTLSLYVNGTTIT
Ga0265460_1188559813300030740SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGTAPSS
Ga0265459_1198973313300030741SoilMADFRKMLFVLVGLMILIGTASAQTGVTCTAFVANQPILRQEGVTEPAGDILITCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGSAPTSIPTEAALLVNDCLTNSGKSSSGGA
Ga0265461_1152809113300030743SoilMADFRKMLFVLAGLLIIISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLLGAQTGPQTLSLFVNGAAITSRQLYSGTSAPSSIP
Ga0265756_10960713300030805SoilMADFRKMLFVLVGLMILIGTASAQTGVTCTAFVANQPILRQEGVTEPAGDILISCSGTLVGAQTGQQTLSLYVNGAAITSRQLYTGTAP
Ga0265750_104964813300030813SoilMADFRKMLFVLAGLMILIGTASAQNGVTCTAFVANQPTLRQEGVTEPAGDILISCSGQLVGAQTGSQTLSLYVNGAAITSRQLYTGTTVPSSIP
Ga0265726_10571213300030824SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSQPTSS
Ga0265725_10371013300030835SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSQP
Ga0075403_1154538813300030846SoilMADFRKMLFVLAGLMIMFIGTASAQTGVTCTAFVANQPLLRQEGTTEPAGDIIIQCSGVPVGAQTQSQTLSLYVNGTTITSRQLYT
Ga0265777_11435313300030877SoilMADFRKMFFVFAALVMIIGVAVPASAQVQCTAFVANQPTLRQEGITEPAGDIILSCTGNPVGSQTTAQTISLYVSGTSITSRQLYSGTSA
Ga0308200_115363513300030905SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCTGTLVGAQTGPQTLSLYVSGAAITSRQLFTGTAP
Ga0138296_185064113300030923SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQTGAQTLSLYVNGA
Ga0265737_10382113300030941SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSQPTSSPTEAALLVND
Ga0265739_10671013300030976SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYT
Ga0265771_102461913300031010SoilMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSQPTSSP
Ga0170834_10232878213300031057Forest SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGTLIGAQTGAHTLSLYVNGASITSRQLYTGTAPTSIPTEAALLVNDCTTNSGVSSSGGSCV
Ga0302324_10360890613300031236PalsaMADFRKMFFVLAAFVMIMAIPASAQISCIAFVANQPTLRQEGITEPAGDVVITCTGTPIGAQTGSQTLSLYVNGTSITSRQLYS
Ga0308194_1035715713300031421SoilMADFRKMLFVLAGLLILISTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILITCSGTLIGAQTGPQTLSLYVSGAAITSRQLFTGTAP
Ga0302326_1118320823300031525PalsaMGSWVKLPRFSQLGILFTLLLSVLSPALAQVSCTAFVANQPTLRQEGTTEAAGDIILSCVGTPVGAQTSSQTLTLYVSGTTISSRQLYTGTAPTSIPTEAALL
Ga0302326_1235846413300031525PalsaMADFRKMFFVFAALVMIMAIPASAQISCVAFVANQPTLRQEGLTEPAGDVILTCTGTPIGAQTGSQTLSLYVNGTSISSRQLYTATSAPTSSPTE
Ga0316038_10875713300031868SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGLTEPAGDVIITCTGTPIGAQTGSQTLSLYVN
Ga0306923_1252220113300031910SoilMADFRKIFFVLAGLLLVISSASAQTTNLACTAFVANQPIMRQEGATEPAGDIIIQCQGTPQGAQTGPQTLSLYTSAAITSRVEVSSTTGLL
Ga0308175_10083790213300031938SoilMADFRKMLFVLVGLLILISSTASAQTGVTCTAFVANQPTLRQEGATEPAGDILISCSGQLVGAQTGAQTLSLYVNGAAITSRQLYTGTAPSSIPTEAALLV
Ga0316035_10964213300031955SoilMADFRKMFFVLAAFVMVMAIPASAQISCIAFVANQPTLRQEGITEPAGDVIITCTGTPIGAQTGSQTLSLYVNGTSITSRQLYSGTSAPTSIPTEAALLVNDCVTNGIASSSF
Ga0308176_1191433813300031996SoilMADFRKMLFVLVGLLILISSTASAQTGVTCTAFVANQPTLRQEGATEPAGDILITCSGQLVGAQTGAQTLSLYVNGAAITSRQLYTGSAPSSIPTEAALLVNDCVTNTGVSQS
Ga0316051_101673213300032119SoilMADFRKMLFVLAGLLIIIGTASAQTGVTCTAFVANQPTLRQEGTTEPAGDILISCSGTLIGAQTGPQTLTLFVNGANVTSRQLWSGTAPTTNIPTEAALLVN
Ga0316053_11504613300032120SoilMADFRKMLFVLAGLMILIGTASAQTGVTCTAFVANQPTLRQEGVTEPAGDILISCSGTLVGAQTGSQTLSLYVNGAAITSRQLYTGS


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.