Metagenome / Metatranscriptome Family F084276

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084276
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	64 residues
Representative Sequence	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKPKKYDLL
Number of Associated Samples	87
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	2.70 %
% of genes near scaffold ends (potentially truncated)	39.29 %
% of genes from short scaffolds (< 2000 bps)	88.39 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.17

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (61.607 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere (8.036 % of family members)
Environment Ontology (ENVO)	Unclassified (55.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (69.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 4.30% β-sheet: 0.00% Coil/Unstructured: 95.70%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.17
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.17
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00128	Alpha-amylase	20.54
PF01593	Amino_oxidase	1.79
PF07883	Cupin_2	0.89
PF13899	Thioredoxin_7	0.89
PF03740	PdxJ	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0296	1,4-alpha-glucan branching enzyme	Carbohydrate transport and metabolism [G]	20.54
COG0366	Glycosidase/amylase (phosphorylase)	Carbohydrate transport and metabolism [G]	20.54
COG1523	Pullulanase/glycogen debranching enzyme	Carbohydrate transport and metabolism [G]	20.54
COG3280	Maltooligosyltrehalose synthase	Carbohydrate transport and metabolism [G]	20.54
COG0854	Pyridoxine 5'-phosphate synthase PdxJ	Coenzyme transport and metabolism [H]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	52.68 %
Unclassified	root	N/A	38.39 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	4.46 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	52.68 %
Unclassified	root	N/A	38.39 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.68 %
Gammaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	52.68 %
Unclassified	root	N/A	38.39 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.68 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Chitinophagia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia	35.71 %
unclassified Bacteroidetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes	4.46 %
Sphingobacteriia	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia	2.68 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	2.68 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Chitinophagales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales	35.71 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.68 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.68 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Chitinophagaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	35.71 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.68 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.68 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Ilyomonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas	12.50 %
Pinibacter	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter	6.25 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.68 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.68 %
Terrimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas	0.89 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Ilyomonas limi	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	12.50 %
Pinibacter aurantiacus	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	6.25 %
Bacteroidetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	4.46 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	2.68 %
Sphingobacteriales	order	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	2.68 %
Terrimonas ferruginea	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	0.89 %
Enterobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000364\|INPhiseqgaiiFebDRAFT_105844557	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	880	Open in IMG/M
3300000559\|F14TC_108669977	Not Available	531	Open in IMG/M
3300000789\|JGI1027J11758_12900776	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	880	Open in IMG/M
3300002099\|JGI24808J26613_1004579	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	3738	Open in IMG/M
3300002100\|JGI24809J26612_1001438	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Terrimonas → Terrimonas ferruginea	8263	Open in IMG/M
3300003544\|Ga0007417J51691_1081924	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	830	Open in IMG/M
3300003579\|Ga0007429J51699_1088066	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1140	Open in IMG/M
3300004114\|Ga0062593_100042641	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2739	Open in IMG/M
3300004114\|Ga0062593_100090521	Not Available	2114	Open in IMG/M
3300004463\|Ga0063356_100182316	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2447	Open in IMG/M
3300005328\|Ga0070676_10085358	All Organisms → cellular organisms → Bacteria	1923	Open in IMG/M
3300005328\|Ga0070676_10103160	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1765	Open in IMG/M
3300005328\|Ga0070676_11068286	Not Available	609	Open in IMG/M
3300005330\|Ga0070690_101399210	Not Available	563	Open in IMG/M
3300005332\|Ga0066388_103398666	Not Available	813	Open in IMG/M
3300005335\|Ga0070666_11275437	Not Available	548	Open in IMG/M
3300005338\|Ga0068868_100767170	All Organisms → cellular organisms → Bacteria	868	Open in IMG/M
3300005340\|Ga0070689_101446329	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	622	Open in IMG/M
3300005355\|Ga0070671_100346874	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1267	Open in IMG/M
3300005366\|Ga0070659_100726788	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	860	Open in IMG/M
3300005455\|Ga0070663_100855556	Not Available	783	Open in IMG/M
3300005466\|Ga0070685_10823497	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	686	Open in IMG/M
3300005535\|Ga0070684_100546098	All Organisms → cellular organisms → Bacteria	1075	Open in IMG/M
3300005544\|Ga0070686_100507331	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	937	Open in IMG/M
3300005547\|Ga0070693_100898170	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	664	Open in IMG/M
3300005547\|Ga0070693_101045117	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	620	Open in IMG/M
3300005616\|Ga0068852_100025327	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	4806	Open in IMG/M
3300005617\|Ga0068859_100566082	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1230	Open in IMG/M
3300005843\|Ga0068860_100642485	Not Available	1069	Open in IMG/M
3300005844\|Ga0068862_101007466	Not Available	824	Open in IMG/M
3300006046\|Ga0066652_101517170	Not Available	621	Open in IMG/M
3300006358\|Ga0068871_102222222	Not Available	523	Open in IMG/M
3300006755\|Ga0079222_10207831	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Sphingobacteriia → Sphingobacteriales	1185	Open in IMG/M
3300006904\|Ga0075424_102713965	Not Available	517	Open in IMG/M
3300009148\|Ga0105243_12888852	Not Available	521	Open in IMG/M
3300009174\|Ga0105241_10419367	Not Available	1178	Open in IMG/M
3300009176\|Ga0105242_10885297	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	891	Open in IMG/M
3300009177\|Ga0105248_13076512	Not Available	531	Open in IMG/M
3300010146\|Ga0126320_1260916	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	705	Open in IMG/M
3300010154\|Ga0127503_10196002	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	664	Open in IMG/M
3300010154\|Ga0127503_10918908	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1126	Open in IMG/M
3300010358\|Ga0126370_11333237	Not Available	674	Open in IMG/M
3300010373\|Ga0134128_11247249	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	820	Open in IMG/M
3300010397\|Ga0134124_10722400	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	988	Open in IMG/M
3300010398\|Ga0126383_11670457	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	726	Open in IMG/M
3300010400\|Ga0134122_11557250	Not Available	683	Open in IMG/M
3300010400\|Ga0134122_11878568	Not Available	633	Open in IMG/M
3300012212\|Ga0150985_100344004	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1140	Open in IMG/M
3300012212\|Ga0150985_105575433	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1253	Open in IMG/M
3300012212\|Ga0150985_109610326	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1097	Open in IMG/M
3300012212\|Ga0150985_110439828	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1873	Open in IMG/M
3300012212\|Ga0150985_118067299	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	702	Open in IMG/M
3300012469\|Ga0150984_104543370	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	827	Open in IMG/M
3300012469\|Ga0150984_106832844	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1344	Open in IMG/M
3300012469\|Ga0150984_113058767	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1271	Open in IMG/M
3300012469\|Ga0150984_116314913	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1298	Open in IMG/M
3300012948\|Ga0126375_11465852	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	582	Open in IMG/M
3300012948\|Ga0126375_11590084	Not Available	562	Open in IMG/M
3300012958\|Ga0164299_10566573	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	770	Open in IMG/M
3300012961\|Ga0164302_10375723	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	960	Open in IMG/M
3300012987\|Ga0164307_10890476	Not Available	715	Open in IMG/M
3300012989\|Ga0164305_11845850	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	547	Open in IMG/M
3300013297\|Ga0157378_10488765	All Organisms → cellular organisms → Bacteria	1228	Open in IMG/M
3300013297\|Ga0157378_11125503	Not Available	823	Open in IMG/M
3300013306\|Ga0163162_10578944	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	1250	Open in IMG/M
3300013306\|Ga0163162_10828450	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	1041	Open in IMG/M
3300013306\|Ga0163162_11481805	All Organisms → cellular organisms → Bacteria → Proteobacteria	773	Open in IMG/M
3300013308\|Ga0157375_12376788	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	632	Open in IMG/M
3300014326\|Ga0157380_12023014	Not Available	638	Open in IMG/M
3300014969\|Ga0157376_10296119	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1530	Open in IMG/M
3300015371\|Ga0132258_10133330	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	5927	Open in IMG/M
3300015371\|Ga0132258_10550753	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2890	Open in IMG/M
3300015371\|Ga0132258_12753861	Not Available	1226	Open in IMG/M
3300015372\|Ga0132256_100160609	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2265	Open in IMG/M
3300015373\|Ga0132257_102089464	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	732	Open in IMG/M
3300015373\|Ga0132257_103929471	Not Available	541	Open in IMG/M
3300015374\|Ga0132255_101589348	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	991	Open in IMG/M
3300019888\|Ga0193751_1105015	All Organisms → cellular organisms → Bacteria	1080	Open in IMG/M
3300020070\|Ga0206356_11153219	Not Available	623	Open in IMG/M
3300020078\|Ga0206352_10596867	Not Available	500	Open in IMG/M
3300020078\|Ga0206352_11109755	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	707	Open in IMG/M
3300020080\|Ga0206350_11350638	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Pinibacter → Pinibacter aurantiacus	765	Open in IMG/M
3300021432\|Ga0210384_11116252	Not Available	692	Open in IMG/M
3300024055\|Ga0247794_10091255	Not Available	894	Open in IMG/M
3300025903\|Ga0207680_11271598	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → unclassified Bacteroidetes → Bacteroidetes bacterium	524	Open in IMG/M
3300025904\|Ga0207647_10145809	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	1385	Open in IMG/M
3300025918\|Ga0207662_11236964	Not Available	531	Open in IMG/M
3300025920\|Ga0207649_11195271	Not Available	601	Open in IMG/M
3300025932\|Ga0207690_11589636	Not Available	546	Open in IMG/M
3300025933\|Ga0207706_10607991	Not Available	939	Open in IMG/M
3300025934\|Ga0207686_10163381	Not Available	1563	Open in IMG/M
3300025940\|Ga0207691_10153106	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2027	Open in IMG/M
3300025945\|Ga0207679_10080384	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	2489	Open in IMG/M
3300025945\|Ga0207679_10503682	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	1081	Open in IMG/M
3300025960\|Ga0207651_11021534	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	739	Open in IMG/M
3300026041\|Ga0207639_10711020	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	933	Open in IMG/M
3300026075\|Ga0207708_11520913	Not Available	588	Open in IMG/M
3300026088\|Ga0207641_10094375	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	2624	Open in IMG/M
3300026088\|Ga0207641_10342877	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae	1422	Open in IMG/M
3300026089\|Ga0207648_10669101	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes → Chitinophagia → Chitinophagales → Chitinophagaceae → Ilyomonas → Ilyomonas limi	960	Open in IMG/M
3300027775\|Ga0209177_10105639	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Bacteroidetes	900	Open in IMG/M
3300028379\|Ga0268266_11396092	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	676	Open in IMG/M
3300028380\|Ga0268265_10333905	Not Available	1378	Open in IMG/M
3300028380\|Ga0268265_12276090	Not Available	549	Open in IMG/M
3300028381\|Ga0268264_10414773	Not Available	1297	Open in IMG/M
3300028381\|Ga0268264_12444204	Not Available	528	Open in IMG/M
3300031226\|Ga0307497_10781227	Not Available	500	Open in IMG/M
3300031538\|Ga0310888_10664455	Not Available	637	Open in IMG/M
3300031716\|Ga0310813_10210544	Not Available	1599	Open in IMG/M
3300032012\|Ga0310902_10957048	Not Available	592	Open in IMG/M
3300033412\|Ga0310810_10481761	All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Enterobacterales	1242	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Host-Associated	Host-Associated	58.04%
Environmental	Environmental	41.96%

Habitat	Taxonomy	Distribution
Plants	Host-Associated → Plants	58.04%
Terrestrial	Environmental → Terrestrial	39.29%
Aquatic	Environmental → Aquatic	2.68%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	39.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	29.46%
Rhizoplane	Host-Associated → Plants → Rhizoplane	27.68%
Freshwater	Environmental → Aquatic → Freshwater	2.68%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	29.46%
Soil	Host-Associated → Plants → Rhizosphere → Soil	19.64%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	16.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	11.61%
Loam	Environmental → Terrestrial → Soil → Loam	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	9.82%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	2.68%
Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	19.64%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	19.64%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	16.07%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	11.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	9.82%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	0.89%
Soil	Host-Associated → Plants → Roots → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	8.04%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	7.14%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere	6.25%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	6.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	5.36%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	5.36%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	3.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	3.57%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	2.68%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	0.89%
Arabidopsis Thaliana Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Thaliana Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000789	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300002099	Soil microbial communities from Manhattan, Kansas, USA - Sample 400um MDA	Environmental	Open in IMG/M
3300002100	Soil microbial communities from Manhattan, Kansas, USA - Sample 500um MDA	Environmental	Open in IMG/M
3300003544	Grassland soil microbial communities from Hopland, California, USA - Sample H2_Rhizo_33 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300003579	Grassland soil microbial communities from Hopland, California, USA - Sample H4_Rhizo_45 (Metagenome Metatranscriptome, Counting Only)	Host-Associated	Open in IMG/M
3300004114	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5	Environmental	Open in IMG/M
3300004463	Combined assembly of Arabidopsis thaliana microbial communities	Host-Associated	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005335	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG	Host-Associated	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005355	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005535	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaG	Environmental	Open in IMG/M
3300005544	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3L metaG	Environmental	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005616	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2	Host-Associated	Open in IMG/M
3300005617	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2	Host-Associated	Open in IMG/M
3300005843	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2	Host-Associated	Open in IMG/M
3300005844	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006358	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2	Host-Associated	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300009177	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG	Host-Associated	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010154	Soil microbial communities from Willow Creek, Wisconsin, USA - WC-WI-TBF metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010398	Tropical forest soil microbial communities from Panama - MetaG Plot_35	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300012212	Combined assembly of Hopland grassland soil	Host-Associated	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012961	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_202_MG	Environmental	Open in IMG/M
3300012987	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300013308	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014969	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300019888	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020078	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-5 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300020080	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-4 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300024055	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S046-202B-6	Environmental	Open in IMG/M
3300025903	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025918	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)	Environmental	Open in IMG/M
3300025920	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025932	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025940	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025960	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027775	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)	Environmental	Open in IMG/M
3300028379	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031538	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D1	Environmental	Open in IMG/M
3300031716	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3	Environmental	Open in IMG/M
3300032012	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C24D3	Environmental	Open in IMG/M
3300033412	Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - NC	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
INPhiseqgaiiFebDRAFT_1058445572	3300000364	Soil	MNSKSVPLQYTHDFTVPRLAPVIPLKPISKEVNKPKKKVLKPKTENELPQFYNKPIYKPKKYDLL*
F14TC_1086699771	3300000559	Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEINKQKRKTSKPKTESELPQFYNKPIYKSKKYDLL*
JGI1027J11758_129007761	3300000789	Soil	MNSKSVPLQYTHDFTVPRLAPVIPLKPISKEVNKPKKKVLKPKTENEVPQFYNKPIYKPKKYDLL*
JGI24808J26613_10045792	3300002099	Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKRTKRKVSKPKIENKLPQFYDKPIYKPKKYDLL*
JGI24809J26612_10014389	3300002100	Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEINKEIIRPKRKVSKPKTESQLPQFYDKPIYKSKKYDLL*
Ga0007417J51691_10819241	3300003544	Avena Fatua Rhizosphere	LQYTHDFTVPRLAPVISLKPILKDINKPKRKVSAPKPENELPQFYNKPIYKSKKYDLL*
Ga0007429J51699_10880661	3300003579	Avena Fatua Rhizosphere	DSFSMNNKSAPLQYTHDFTVPRLAPVISLKPILKGINKPKRKVSAPKPENELPQFYNKPIYKSKKI*
Ga0062593_1000426412	3300004114	Soil	MNNNSAPLQYSNDFTTPKLAPVISLKPISKAVIKPKRKVSKPKTENELPQFYTKPIYKSKKYDLL*
Ga0062593_1000905212	3300004114	Soil	MNNNSAPLQYSHDFTAPRLAPVISLKPISKAVSKPRRRVSKPKTENELPEFYTKPIYKSKKYDLL*
Ga0063356_1001823165	3300004463	Arabidopsis Thaliana Rhizosphere	MINNAPLQYSHDFTTPRLAPVISLKPISKTITKSKRKVSKQKEENELPQFYTKPIYKSKKYDLL*
Ga0070676_100853581	3300005328	Miscanthus Rhizosphere	MNNKSAPLQYTHDFTFPRLAPVISLKPISKEIYKEINKPKRKVSRPKTASELPQFYDKPIYKSKKYDLL*
Ga0070676_101031602	3300005328	Miscanthus Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0070676_110682861	3300005328	Miscanthus Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0070690_1013992101	3300005330	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0066388_1033986662	3300005332	Tropical Forest Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPISKGVKTTKRKISKPKIENNLPQFYDKPIYKPKKYDLL*
Ga0070666_112754371	3300005335	Switchgrass Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0068868_1007671703	3300005338	Miscanthus Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEINRPKRKVSKPKTQNELPQFYNKPIYKSKKYDLL*
Ga0070689_1014463291	3300005340	Switchgrass Rhizosphere	YTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0070669_1015017142	3300005353	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINRPKRKVLKPKTENQLPEF
Ga0070671_1003468741	3300005355	Switchgrass Rhizosphere	MNNKSASLQYARDFTVPRLAPVISLKPTVKEVNRPKKKVSKPKTEKELPHFYDKPIYKSKKYDLL*
Ga0070659_1007267882	3300005366	Corn Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKLENKLPQFYDKPIYKPKKYDLL*
Ga0070663_1008555561	3300005455	Corn Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0070685_108234972	3300005466	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKY
Ga0070684_1005460983	3300005535	Corn Rhizosphere	MNNKSAPLQYAHDFTVPRLAPVISLKPISKDIYKAKRKVSKPKTEDQENKLPEFYNKPIYRSKKYDLL*
Ga0070686_1005073311	3300005544	Switchgrass Rhizosphere	KSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0070693_1008981702	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	QLNDSFSMNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0070693_1010451171	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	IDSFSMNNNSAPLQYSHDFTTPRLAPVISLKPISKGVIKPKRKIQKPKTENELPEFYTKPIYKPKKYDLL*
Ga0068852_1000253271	3300005616	Corn Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIY
Ga0068859_1005660822	3300005617	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPIPKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0068860_1006424852	3300005843	Switchgrass Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIEYKLPQFYDKPIYKPKKYDLL*
Ga0068862_1010074661	3300005844	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLP
Ga0066652_1015171702	3300006046	Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPILKDINKPKRKVSAPKPENELPQFYNKPIYKSKKYDLL*
Ga0068871_1022222221	3300006358	Miscanthus Rhizosphere	THDFTFPRLAPVISLKAISKELNKPKRKVSKPRTENGAKELPEFYNKPIYKSKKYDLL*
Ga0079222_102078311	3300006755	Agricultural Soil	MNNNSAPLQYSHDFTTPRLAPVISLKPISKAIVKPKRKISKQKPENELPQFYTKPIYKSKKYDLL*
Ga0075424_1027139652	3300006904	Populus Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINRPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0105243_128888521	3300009148	Miscanthus Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKPKKY
Ga0105241_104193671	3300009174	Corn Rhizosphere	MNNNSAPLQYSHDFTAPRLAPVISLKPISKAVSKPRRRVSKPKTENELPEFYTKTIYKSKKYDLL*
Ga0105242_108852971	3300009176	Miscanthus Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEIIKPKRKVLKPKTENQLPQFYNKPIYKSKKYDLL*
Ga0105248_130765121	3300009177	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKY
Ga0126320_12609161	3300010146	Soil	KRFPSMTNKIAPLQYAHDFTVPRLAPVISLNPISKDTYKAKRKVSKPKIEDKENKLPEFYNKPIYRSKKYDLL*
Ga0127503_101960022	3300010154	Soil	NNKSAALQYTHDFTVPRLAPVISLKPISKEIIKPKRKVLKPKTENQLPQFYNKPIYKSKKYDLL*
Ga0127503_109189081	3300010154	Soil	FSMNSKSVPLQYTHEFTVPRLAPVISLKPISKEVNKPKRKVLKPKTENQLPQFYNKPIYKQKKYDLL*
Ga0126370_113332371	3300010358	Tropical Forest Soil	MNNKTAPLQYTHDYTVPRLAPVISLKPISKEPAKPKRKVSKPKIENELPQFYNKPIYKPKKYDLL*
Ga0134128_112472491	3300010373	Terrestrial Soil	SASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0134124_107224001	3300010397	Terrestrial Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0126383_116704571	3300010398	Tropical Forest Soil	MNNKSAPLQYTHDFTVPRLAPVISLKPIPKEINKPTRRISKPKTEKEERDLPEFYNKPIYRSKKYDLL*
Ga0134122_115572502	3300010400	Terrestrial Soil	MNNNSAPLQYSHDFTAPRLAPVISLKPISKAVSKPRKKVLKPKAENELPEFYTKPIYKSKKYDLL*
Ga0134122_118785681	3300010400	Terrestrial Soil	MNNNSAPLQYSHDFTTPRLAPVISLKPISKGVIKPKRKIQKPKTENELPEFYTKPIYKPKKYDLL*
Ga0150985_1003440043	3300012212	Avena Fatua Rhizosphere	FFSMNNKSAPLLYTHDFAVPRLAPVISLKPISKEIINRPKRKVSKPKTEIELPQFYDKPIYKSKKYDLL*
Ga0150985_1055754333	3300012212	Avena Fatua Rhizosphere	ALPISFTMNNKSASLQYIHDFTVPRVAPVIPLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0150985_1096103263	3300012212	Avena Fatua Rhizosphere	FSMNNKSAPLQYAHDFTAPRLAPVILLKPIPKEINKPKRKVLKPKTENQLPQFYDKPIYKSKKYDLL*
Ga0150985_1104398284	3300012212	Avena Fatua Rhizosphere	MNNKSASLQYTRDFTVARLAPVISLKPLSKEVINKPKRRVSKPKTENELPQFYNRPIYKSKKYDLL*
Ga0150985_1180672991	3300012212	Avena Fatua Rhizosphere	IDSFSMNNKSAPLQYTHDFTVPRLAPVISLKPILKGINKPKRKVSAPKPENELPQFYNKPIYKSKKYDLL*
Ga0150984_1045433701	3300012469	Avena Fatua Rhizosphere	NKGASLQYAHDFTVPRLAPVISLKPIAKEINKQKRKVLKPKTQDELPHFYTKPIYRPKKYDLL*
Ga0150984_1068328441	3300012469	Avena Fatua Rhizosphere	MNNKSAPLQYAHDFTAPRLAPVILLKPIPKEINKPKRKVLKPKTENQLPQFYDKPIYKSKKYDLL*
Ga0150984_1130587671	3300012469	Avena Fatua Rhizosphere	SFFSMNNKSAPLLYTHDFAVPRLAPVISLKPISKEIINRPKRKVSKPKTEIELPQFYDKPIYKSKKYDLL*
Ga0150984_1163149131	3300012469	Avena Fatua Rhizosphere	NNKSASLQYIHDFTVPRVAPVIPLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKI*
Ga0126375_114658521	3300012948	Tropical Forest Soil	NKSAPLQYTRDFTVHRLAPVFSLKPISKEINKQKRKISKPKAESEFPQFYNKPIYKPKKYDLL*
Ga0126375_115900841	3300012948	Tropical Forest Soil	MIPSMNNNGAPLQYTYDFTAPRLAPVISLKSVSKDVVKPRRKIQKPKTDGKPVSELPQFYNKPIYKSKKYDLL*
Ga0164299_105665731	3300012958	Soil	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKSKKYDLL*
Ga0164302_103757232	3300012961	Soil	MNNKSASLQYTHDFTVTRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL*
Ga0164307_108904761	3300012987	Soil	MDNKSVPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKLSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0164305_118458501	3300012989	Soil	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKSKKYDL
Ga0157378_104887652	3300013297	Miscanthus Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0157378_111255032	3300013297	Miscanthus Rhizosphere	MNNKSVTLQYTHDFTVPRLAPVISLKPILKEAHKPKRKILKPKTENQLPQFY
Ga0163162_105789443	3300013306	Switchgrass Rhizosphere	MNNKSVPLQYTHDFTVPRLAPVISLKPILKEAHKPKRKILKPKTENQLPQFYNKPIYKSKKYDLL*
Ga0163162_108284502	3300013306	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKQKKYDLL*
Ga0163162_114818052	3300013306	Switchgrass Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTIKRTVSKPKIENKLPQFYDKPIYKPKKY
Ga0157375_123767881	3300013308	Miscanthus Rhizosphere	DFTVPRLAPVISLKPISKDIYKAKRKVSKPKTEDQENKLPEFYNKPIYRSKKYDLL*
Ga0157380_120230141	3300014326	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKLEDKLPQFYDKPIYKPKKYDLL*
Ga0157376_102961191	3300014969	Miscanthus Rhizosphere	MNIKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0132258_101333301	3300015371	Arabidopsis Rhizosphere	MIPSMNNNNVPLQYSHDFTVPRLAPVISLKPVSKDLIKPRRKVQKPKTDGKPASELPEFYNKPIYKSKKYDLL*
Ga0132258_105507534	3300015371	Arabidopsis Rhizosphere	MNNKSAPLQYAHDFTVPRLAPVISLKPISKDVVKPKRKVLKPKTENEETKLPEFYNRPIYRSKKYDLL*
Ga0132258_127538611	3300015371	Arabidopsis Rhizosphere	MNNKTESLQYTHDFTLPRLAPVISLKPIAKEMNRPKKKVSKPKTEKELPHFYDKPIYKSK
Ga0132256_1001606094	3300015372	Arabidopsis Rhizosphere	MIPSMNNNNAPLQYSHDFTVPRLAPVISLKPVSKDLIKPRRKVQKPKTDGKPASELPEFYNKPIYKSKKYDLL*
Ga0132257_1020894641	3300015373	Arabidopsis Rhizosphere	MNNKSTPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKSKKYDLL*
Ga0132257_1039294711	3300015373	Arabidopsis Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPITKDINKPKRKVSKPKTENELPQFYNKPIYK
Ga0132255_1015893482	3300015374	Arabidopsis Rhizosphere	MNNKSTPLQYTHDFTVPRLAPVISLKPISKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL*
Ga0193751_11050151	3300019888	Soil	MNNSASLQHVKDITVRTLAPVIPLKPLPKEEVNKKRKVLNVKRENLPPQFYNKPIYKPKKYDLL
Ga0206356_111532192	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	DSFSMNNNSAPLQYSHDFTAPRLAPVISLKPISKAVSKPRRRVSKPKTENELPEFYTKPIYKSKKYDLL
Ga0206352_105968671	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0206352_111097552	3300020078	Corn, Switchgrass And Miscanthus Rhizosphere	SFSMNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL
Ga0206350_113506381	3300020080	Corn, Switchgrass And Miscanthus Rhizosphere	FFSMKNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0210384_111162522	3300021432	Soil	MNSSASLQHVKDITVRSLAPVIPLKPLPKEEVNKKRKVLNVKRENLPAQFYNKPIYKPKKYDLL
Ga0247794_100912552	3300024055	Soil	MNNNSAPLQYSHDFTAPRLAPVISLKPISKAVSKPRRRVSKPKTENELPEFYTKPIYKSKKYDLL
Ga0207680_112715981	3300025903	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTFPRLAPVISLKPISKEIYKEINKPKRKVSRPKTASELPQFYDKPIYKSKKYDLL
Ga0207647_101458092	3300025904	Corn Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKLENKLPQFYDKPIYKPKKYDLL
Ga0207662_112369641	3300025918	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPIPKEVKTTKSKVSKPKIENK
Ga0207649_111952712	3300025920	Corn Rhizosphere	MNNKSAPLQYAHDFTVPRLAPVISLKPISKDIYKAKRKVSKPKTEDQENKLPEFYNKPIYRSKKYDLL
Ga0207690_115896361	3300025932	Corn Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKLENKLPQFYDKPIYKPKKY
Ga0207706_106079912	3300025933	Corn Rhizosphere	MNNKSAPLQYTHDFTFPRLAPVISLKPISKEVKTTKRKVSKPKTENKLPQFYDKPIYKPKKYDLL
Ga0207686_101633811	3300025934	Miscanthus Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPK
Ga0207691_101531062	3300025940	Miscanthus Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0207679_100803842	3300025945	Corn Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0207679_105036821	3300025945	Corn Rhizosphere	SCQLNDSFSMNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDLL
Ga0207651_110215341	3300025960	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKP
Ga0207639_107110201	3300026041	Corn Rhizosphere	SASLQYAHDFTVPRLAPVISLKPISKEINKPKRKVLKPKTENQLPEFYNKPIYKPKKYDL
Ga0207708_115209131	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MNNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKIENKLPQFY
Ga0207641_100943752	3300026088	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPIPKEVKTTKSKVSKPKTENKLPQFYDKPIYKPKKYDLL
Ga0207641_103428771	3300026088	Switchgrass Rhizosphere	MNNKSASLQYTRDFTVPRLAPVISLKPIAKQVNRPKKKVSEPKTEKELPHFYDKPIYKSKKYDLL
Ga0207648_106691011	3300026089	Miscanthus Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTTKRKVSKPKLENKLPQFYDKPIYKPKKYDLL
Ga0209177_101056391	3300027775	Agricultural Soil	MNNNSAPLQYSHDFTTPRLAPVISLKPISKAIVKPKRKISKQKPENELPQFYTKPIYKSKKYDLL
Ga0268266_113960921	3300028379	Switchgrass Rhizosphere	MNNKSAPLQYTHDFTFPRLAPVISLKPISKEIYKEINKPKRKVSRPKTASELPQFYDKPIYKSK
Ga0268265_103339052	3300028380	Switchgrass Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKEVKTIKRTVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0268265_122760901	3300028380	Switchgrass Rhizosphere	MNNKSAPLQYAHDFTVPRLAPVISLKPISKDIYKAKRKVSKPKTEDQENKLPEFYNK
Ga0268264_104147731	3300028381	Switchgrass Rhizosphere	MKNKSAPLQYTHDFTVPRLAPVISLKPISKDVKTIKRTVSKPKIEYKLPQFYDKPIYKPKKYDLL
Ga0268264_124442042	3300028381	Switchgrass Rhizosphere	MNNKSASLQYTHDFTVPRLAPVISLKPIPKEVKTTKSKVSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0307497_107812271	3300031226	Soil	MNNKGAPLQYIHDFTVPRLAPVISLKPISKEINKPKRKVAKPQAENQLPQFYSKPIYKSKKYDLL
Ga0310888_106644552	3300031538	Soil	MNNKSVPLQYTHDFAVPRLAPVISLKPISKEIINRPKRKVSKPKTENELPQFYNKPIYKQKKYDLL
Ga0310813_102105441	3300031716	Soil	MNNNSAPLQYSNDFTTPKLAPVISLKPISKAVIKPKRKVSKPKTENELPQFYTKPIYKSKKYDLL
Ga0310902_109570481	3300032012	Soil	MDNKSVPLQYTHDFTVPRLAPVFSLKPISKEVKTTKRKLSKPKIENKLPQFYDKPIYKPKKYDLL
Ga0310810_104817612	3300033412	Soil	MNNNSAPLQYSNDFTTPKLAPVISLKPISKAVIKPRRKVSKPKTENELPQFYTKPIYKPKKYDLL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084276

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences