Metagenome / Metatranscriptome Family F084202

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084202
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	117 residues
Representative Sequence	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPTGETRPRSGFERGSASDPGADSER
Number of Associated Samples	95
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	9.82 %
% of genes near scaffold ends (potentially truncated)	40.18 %
% of genes from short scaffolds (< 2000 bps)	80.36 %
Associated GOLD sequencing projects	90
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Unclassified (58.036 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (11.607 % of family members)
Environment Ontology (ENVO)	Unclassified (30.357 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (44.643 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.09% β-sheet: 3.94% Coil/Unstructured: 51.97%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08241	Methyltransf_11	4.46
PF00753	Lactamase_B	2.68
PF00486	Trans_reg_C	1.79
PF03352	Adenine_glyco	1.79
PF13649	Methyltransf_25	1.79
PF01592	NifU_N	1.79
PF01329	Pterin_4a	0.89
PF13474	SnoaL_3	0.89
PF13466	STAS_2	0.89
PF04191	PEMT	0.89
PF03018	Dirigent	0.89
PF00266	Aminotran_5	0.89
PF05163	DinB	0.89
PF08450	SGL	0.89
PF13581	HATPase_c_2	0.89
PF01521	Fe-S_biosyn	0.89
PF12734	CYSTM	0.89
PF13541	ChlI	0.89
PF12085	DUF3562	0.89
PF12681	Glyoxalase_2	0.89
PF01613	Flavin_Reduct	0.89
PF07883	Cupin_2	0.89
PF01458	SUFBD	0.89
PF05437	AzlD	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0822	Fe-S cluster assembly scaffold protein IscU, NifU family	Posttranslational modification, protein turnover, chaperones [O]	1.79
COG2818	3-methyladenine DNA glycosylase Tag	Replication, recombination and repair [L]	1.79
COG0316	Fe-S cluster assembly iron-binding protein IscA	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG0719	Fe-S cluster assembly scaffold protein SufB	Posttranslational modification, protein turnover, chaperones [O]	0.89
COG1853	FMN reductase RutF, DIM6/NTAB family	Energy production and conversion [C]	0.89
COG2154	Pterin-4a-carbinolamine dehydratase	Coenzyme transport and metabolism [H]	0.89
COG2318	Bacillithiol/mycothiol S-transferase BstA/DinB, DinB/YfiT family (unrelated to E. coli DinB)	Secondary metabolites biosynthesis, transport and catabolism [Q]	0.89
COG3386	Sugar lactone lactonase YvrE	Carbohydrate transport and metabolism [G]	0.89
COG3391	DNA-binding beta-propeller fold protein YncE	General function prediction only [R]	0.89
COG4841	Uncharacterized conserved protein YneR, related to HesB/YadR/YfhF family	Function unknown [S]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
All Organisms	root	All Organisms	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
cellular organisms	root	All Organisms → cellular organisms	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	41.96 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	30.36 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	30.36 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	19.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Rubrobacteria	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	8.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Jiangellales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales	1.79 %
Rubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales	1.79 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	1.79 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Jiangellaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae	1.79 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	1.79 %
Rubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae	1.79 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.89 %
Cellulomonadaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Jiangella	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella	1.79 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1.79 %
Rubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter	1.79 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.89 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Jiangella muralis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1.79 %
Rubrobacter marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	1.79 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.89 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.89 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	58.04 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	8.04 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2.68 %
Jiangella muralis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1.79 %
Rubrobacter marinus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	1.79 %
Streptomyces sp. 1-11	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 1-11	0.89 %
Cellulomonas	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	0.89 %
Dermacoccaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908045\|KansclcFeb2_ConsensusfromContig664852	Not Available	539	Open in IMG/M
2199352025\|deepsgr__Contig_33432	Not Available	523	Open in IMG/M
3300000364\|INPhiseqgaiiFebDRAFT_101946601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1782	Open in IMG/M
3300000550\|F24TB_13502880	Not Available	531	Open in IMG/M
3300000559\|F14TC_103490459	Not Available	708	Open in IMG/M
3300000891\|JGI10214J12806_12666662	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	951	Open in IMG/M
3300000956\|JGI10216J12902_101216428	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1510	Open in IMG/M
3300000956\|JGI10216J12902_101290498	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	875	Open in IMG/M
3300000956\|JGI10216J12902_101612732	Not Available	858	Open in IMG/M
3300000956\|JGI10216J12902_110894728	All Organisms → cellular organisms → Bacteria	2863	Open in IMG/M
3300003911\|JGI25405J52794_10032272	Not Available	1090	Open in IMG/M
3300004479\|Ga0062595_100275566	Not Available	1113	Open in IMG/M
3300005331\|Ga0070670_100040189	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4022	Open in IMG/M
3300005332\|Ga0066388_107805790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Dermacoccaceae	536	Open in IMG/M
3300005341\|Ga0070691_10562493	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	668	Open in IMG/M
3300005345\|Ga0070692_10074133	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1820	Open in IMG/M
3300005354\|Ga0070675_100436550	Not Available	1173	Open in IMG/M
3300005366\|Ga0070659_100086293	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2511	Open in IMG/M
3300005366\|Ga0070659_101805169	Not Available	548	Open in IMG/M
3300005441\|Ga0070700_100239609	Not Available	1295	Open in IMG/M
3300005459\|Ga0068867_100868858	All Organisms → cellular organisms → Bacteria	809	Open in IMG/M
3300005518\|Ga0070699_100795285	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	865	Open in IMG/M
3300005615\|Ga0070702_101323675	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	586	Open in IMG/M
3300005713\|Ga0066905_101019136	Not Available	731	Open in IMG/M
3300005937\|Ga0081455_10238461	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	1338	Open in IMG/M
3300006576\|Ga0074047_11237610	Not Available	574	Open in IMG/M
3300006844\|Ga0075428_101192925	Not Available	802	Open in IMG/M
3300006846\|Ga0075430_100084727	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2654	Open in IMG/M
3300006852\|Ga0075433_10059128	All Organisms → cellular organisms → Bacteria	3353	Open in IMG/M
3300006852\|Ga0075433_11149902	Not Available	674	Open in IMG/M
3300006871\|Ga0075434_100543313	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1182	Open in IMG/M
3300006871\|Ga0075434_101994758	Not Available	586	Open in IMG/M
3300007076\|Ga0075435_100340603	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1285	Open in IMG/M
3300007076\|Ga0075435_101971499	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	513	Open in IMG/M
3300009094\|Ga0111539_11089264	Not Available	928	Open in IMG/M
3300009094\|Ga0111539_12562665	Not Available	591	Open in IMG/M
3300009147\|Ga0114129_10082708	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4461	Open in IMG/M
3300009156\|Ga0111538_11003261	Not Available	1056	Open in IMG/M
3300009157\|Ga0105092_10012519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	4455	Open in IMG/M
3300009168\|Ga0105104_10878641	Not Available	525	Open in IMG/M
3300009678\|Ga0105252_10443852	Not Available	596	Open in IMG/M
3300009811\|Ga0105084_1092687	Not Available	565	Open in IMG/M
3300009818\|Ga0105072_1070784	Not Available	678	Open in IMG/M
3300010029\|Ga0105074_1081234	Not Available	597	Open in IMG/M
3300010400\|Ga0134122_10303538	Not Available	1371	Open in IMG/M
3300011412\|Ga0137424_1010123	Not Available	1243	Open in IMG/M
3300011423\|Ga0137436_1138458	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	651	Open in IMG/M
3300011439\|Ga0137432_1288280	Not Available	525	Open in IMG/M
3300011440\|Ga0137433_1011431	All Organisms → cellular organisms → Bacteria	2635	Open in IMG/M
3300012904\|Ga0157282_10410197	Not Available	510	Open in IMG/M
3300012948\|Ga0126375_11265222	Not Available	618	Open in IMG/M
3300012948\|Ga0126375_11560624	Not Available	567	Open in IMG/M
3300012958\|Ga0164299_11315787	Not Available	554	Open in IMG/M
3300013306\|Ga0163162_12147643	Not Available	641	Open in IMG/M
3300014326\|Ga0157380_10299494	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1480	Open in IMG/M
3300014326\|Ga0157380_13415669	Not Available	508	Open in IMG/M
3300014968\|Ga0157379_12304534	Not Available	536	Open in IMG/M
3300015371\|Ga0132258_10756299	All Organisms → cellular organisms → Bacteria	2448	Open in IMG/M
3300015371\|Ga0132258_11252528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1875	Open in IMG/M
3300015371\|Ga0132258_12244546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1370	Open in IMG/M
3300015372\|Ga0132256_100207300	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2010	Open in IMG/M
3300015373\|Ga0132257_101153582	Not Available	980	Open in IMG/M
3300015373\|Ga0132257_102979957	Not Available	617	Open in IMG/M
3300015374\|Ga0132255_100214601	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2729	Open in IMG/M
3300015374\|Ga0132255_103815503	Not Available	640	Open in IMG/M
3300018055\|Ga0184616_10161763	All Organisms → cellular organisms → Bacteria	831	Open in IMG/M
3300018073\|Ga0184624_10471501	Not Available	549	Open in IMG/M
3300018081\|Ga0184625_10030318	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2642	Open in IMG/M
3300018083\|Ga0184628_10359537	Not Available	763	Open in IMG/M
3300018469\|Ga0190270_10030950	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3479	Open in IMG/M
3300019767\|Ga0190267_11689958	Not Available	501	Open in IMG/M
3300020005\|Ga0193697_1035554	Not Available	1246	Open in IMG/M
3300020016\|Ga0193696_1013968	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2174	Open in IMG/M
3300022534\|Ga0224452_1019526	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1876	Open in IMG/M
3300022756\|Ga0222622_10064798	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2125	Open in IMG/M
3300025735\|Ga0207713_1224013	Not Available	565	Open in IMG/M
3300025904\|Ga0207647_10002808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	13132	Open in IMG/M
3300025926\|Ga0207659_10755696	Not Available	834	Open in IMG/M
3300025926\|Ga0207659_11176285	Not Available	659	Open in IMG/M
3300025933\|Ga0207706_11152281	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Cellulomonadaceae → Cellulomonas	646	Open in IMG/M
3300025972\|Ga0207668_11688028	Not Available	572	Open in IMG/M
3300026075\|Ga0207708_10009900	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	7077	Open in IMG/M
3300026075\|Ga0207708_10094131	Not Available	2312	Open in IMG/M
3300026075\|Ga0207708_10359044	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Jiangellales → Jiangellaceae → Jiangella → Jiangella muralis	1197	Open in IMG/M
3300026089\|Ga0207648_12088334	Not Available	528	Open in IMG/M
3300027873\|Ga0209814_10000920	All Organisms → cellular organisms → Bacteria	10142	Open in IMG/M
3300028381\|Ga0268264_10244871	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1662	Open in IMG/M
3300028596\|Ga0247821_10922899	Not Available	582	Open in IMG/M
3300028719\|Ga0307301_10018946	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	2002	Open in IMG/M
3300028755\|Ga0307316_10346600	Not Available	546	Open in IMG/M
3300028771\|Ga0307320_10207495	Not Available	767	Open in IMG/M
3300028803\|Ga0307281_10439712	Not Available	503	Open in IMG/M
3300030336\|Ga0247826_10645296	Not Available	816	Open in IMG/M
3300031226\|Ga0307497_10495178	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Rubrobacteria → Rubrobacterales → Rubrobacteraceae → Rubrobacter → Rubrobacter marinus	602	Open in IMG/M
3300031562\|Ga0310886_10061797	All Organisms → cellular organisms → Bacteria	1741	Open in IMG/M
3300031740\|Ga0307468_100041227	Not Available	2319	Open in IMG/M
3300031820\|Ga0307473_11306895	Not Available	543	Open in IMG/M
3300031854\|Ga0310904_10422586	Not Available	878	Open in IMG/M
3300031858\|Ga0310892_10508808	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. 1-11	803	Open in IMG/M
3300031913\|Ga0310891_10082457	Not Available	961	Open in IMG/M
3300031943\|Ga0310885_10029140	All Organisms → cellular organisms → Bacteria	2139	Open in IMG/M
3300032003\|Ga0310897_10551326	Not Available	565	Open in IMG/M
3300032017\|Ga0310899_10107346	Not Available	1137	Open in IMG/M
3300032075\|Ga0310890_10751773	All Organisms → cellular organisms → Bacteria	768	Open in IMG/M
3300032122\|Ga0310895_10286247	Not Available	774	Open in IMG/M
3300032174\|Ga0307470_10395692	Not Available	975	Open in IMG/M
3300032179\|Ga0310889_10760106	Not Available	509	Open in IMG/M
3300032180\|Ga0307471_101334327	Not Available	879	Open in IMG/M
3300033550\|Ga0247829_10342522	Not Available	1221	Open in IMG/M
3300034113\|Ga0364937_037975	Not Available	864	Open in IMG/M
3300034115\|Ga0364945_0229083	Not Available	571	Open in IMG/M
3300034176\|Ga0364931_0333101	Not Available	506	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	64.29%
Host-Associated	Host-Associated	35.71%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	52.68%
Plants	Host-Associated → Plants	35.71%
Aquatic	Environmental → Aquatic	11.61%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	50.00%
Rhizosphere	Host-Associated → Plants → Rhizosphere	23.21%
Rhizoplane	Host-Associated → Plants → Rhizoplane	12.50%
Sediment	Environmental → Aquatic → Sediment	9.82%
Floodplain	Environmental → Terrestrial → Floodplain	2.68%
Freshwater	Environmental → Aquatic → Freshwater	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	36.61%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	15.18%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	9.82%
Soil	Host-Associated → Plants → Rhizosphere → Soil	8.04%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	6.25%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	6.25%
Sand	Environmental → Terrestrial → Soil → Sand	2.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	2.68%
Sediment	Environmental → Aquatic → Freshwater → Sediment	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	15.18%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.29%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	11.61%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	9.82%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.14%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	6.25%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	6.25%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	3.57%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	2.68%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	11.61%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	11.61%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	9.82%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	6.25%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	6.25%
Soil	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Soil	4.46%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	3.57%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	3.57%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	2.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	2.68%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Freshwater Sediment	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Tabebuia Heterophylla Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere	1.79%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908045	Soil microbial communities from Great Prairies - Kansas assembly 1 01_01_2011	Environmental	Open in IMG/M
2199352025	Soil microbial communities from Rothamsted, UK, for project Deep Soil - DEEP SOIL	Environmental	Open in IMG/M
3300000364	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000550	Amended soil microbial communities from Kansas Great Prairies, USA - BrdU amended with acetate total DNA F2.4 TB clc assemly	Environmental	Open in IMG/M
3300000559	Amended soil microbial communities from Kansas Great Prairies, USA - control no BrdU total DNA F1.4 TC clc assemly	Environmental	Open in IMG/M
3300000891	Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300003911	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005331	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-3 metaG	Host-Associated	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005341	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-1 metaG	Environmental	Open in IMG/M
3300005345	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaG	Environmental	Open in IMG/M
3300005354	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG	Host-Associated	Open in IMG/M
3300005366	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-3 metaG	Host-Associated	Open in IMG/M
3300005441	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG	Environmental	Open in IMG/M
3300005459	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2	Host-Associated	Open in IMG/M
3300005518	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaG	Environmental	Open in IMG/M
3300005615	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG	Environmental	Open in IMG/M
3300005713	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)	Environmental	Open in IMG/M
3300005937	Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1	Host-Associated	Open in IMG/M
3300006576	Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPA (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006846	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4	Host-Associated	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009157	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (1) Depth 19-21cm March2015	Environmental	Open in IMG/M
3300009168	Freshwater sediment microbial communities from Prairie Pothole Lake near Jamestown, North Dakota, USA - PPLs Lake P7 Core (6) Depth 19-21cm September2015	Environmental	Open in IMG/M
3300009678	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT100	Environmental	Open in IMG/M
3300009811	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N3_20_30	Environmental	Open in IMG/M
3300009818	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW N1_30_40	Environmental	Open in IMG/M
3300010029	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_10_20	Environmental	Open in IMG/M
3300010400	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2	Environmental	Open in IMG/M
3300011412	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT620_2	Environmental	Open in IMG/M
3300011423	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMGT119_2	Environmental	Open in IMG/M
3300011439	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT820_2	Environmental	Open in IMG/M
3300011440	Soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River MetaG ERMZT840_2	Environmental	Open in IMG/M
3300012904	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S029-104C-1	Environmental	Open in IMG/M
3300012948	Tropical forest soil microbial communities from Panama - MetaG Plot_14	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300014326	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S3-5 metaG	Host-Associated	Open in IMG/M
3300014968	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300018055	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_90_coex	Environmental	Open in IMG/M
3300018073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_5_b1	Environmental	Open in IMG/M
3300018081	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1	Environmental	Open in IMG/M
3300018083	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM4_5_b1	Environmental	Open in IMG/M
3300018469	Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 320 T	Environmental	Open in IMG/M
3300019767	Populus adjacent soil microbial communities from riparian zone of Oak Creek, Arizona, USA - 239 T	Environmental	Open in IMG/M
3300020005	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m2	Environmental	Open in IMG/M
3300020016	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3m1	Environmental	Open in IMG/M
3300022534	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_30_b1	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025735	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025904	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2 (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025972	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027873	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028596	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Glycerol_Day14	Environmental	Open in IMG/M
3300028719	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_182	Environmental	Open in IMG/M
3300028755	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356	Environmental	Open in IMG/M
3300028771	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_369	Environmental	Open in IMG/M
3300028803	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_120	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300031562	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D3	Environmental	Open in IMG/M
3300031740	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300031854	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C48D1	Environmental	Open in IMG/M
3300031858	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D2	Environmental	Open in IMG/M
3300031913	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D4	Environmental	Open in IMG/M
3300031943	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60D2	Environmental	Open in IMG/M
3300032003	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D1	Environmental	Open in IMG/M
3300032017	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D4	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032122	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C0D4	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032179	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D2	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300033550	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day4	Environmental	Open in IMG/M
3300034113	Sediment microbial communities from East River floodplain, Colorado, United States - 7_s17	Environmental	Open in IMG/M
3300034115	Sediment microbial communities from East River floodplain, Colorado, United States - 29_s17	Environmental	Open in IMG/M
3300034176	Sediment microbial communities from East River floodplain, Colorado, United States - 21_j17	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
KansclcFeb2_13919290	2124908045	Soil	LPALDHVFGGGATTEVSTSGPYHLWRLTDTLQAPTMLEAAEAVIRMAREARDFAGIHPGQAVGFSSQLRDLTHPVELVLPPESSPG
deepsgr_00190120	2199352025	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ
INPhiseqgaiiFebDRAFT_1019466012	3300000364	Soil	VPVYGLVITLSDVELTADQSERMRPALDRVFGSDATTEVSSSGPYHLWRLTHTIDAPTMLDAAETVIRMAREAREEAGIDPGQAVGFSSQLRDLTHPIEMVLPPETGRG*
F24TB_135028801	3300000550	Soil	MPVYGLVITLSDVQLSAEQSERVRPALDRVFGSDATTEVSTSGPYHLWRLAHTIEAPTMLQAAEAVIRMAREAREAAGIRPGQAVGFSSQLRDLTHPVEQVLPPEPPPRWT*
F14TC_1034904592	3300000559	Soil	MPVYGLVITLSDVQLSAEQSERVRPALDRVFGXXATTEVSTSGPYHLWRLAHTIEAPTMLQAAEAVIRMAREAREAAGIRPGQAVGFSSQLRDLTHPVEQVLPPEPPPRWT*
JGI10214J12806_126666622	3300000891	Soil	MPIYGLAITLSDAELSTEQSERVLPALASVFGTDDITEVATWGRYHVWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQAVGFSSQLRDLTHPHELVFPMGETRPRSGFERGSASDPEADFER*
JGI10216J12902_1012164284	3300000956	Soil	MPIYGLVITLSDLELTGEQSERVRPALDHVFGSDATTEVSSSGPYHLWRLTHTIDAPTMLDAAETVIRMAREAREEAGIAPGQAVGFSSQLRDLTHPIEMVLPPE
JGI10216J12902_1012904982	3300000956	Soil	MPVYGLVITLSDAQLSREQSERVLPALDRVFGSDATTELSTSGPYHLWRLTDTIEAPTMLEAAETVIRMAREAREAAGIHAGQGVAFSSQLRDLTHPVELVLPPETPPT*
JGI10216J12902_1016127321	3300000956	Soil	VPVYGLVITLSDVELSAEQSERVLPALDHVFGGGATTEVSTSGPYHLWRLTDTLQASTMLEAAEAVIRMAREARDFAGIHPGQAVGFSSQLRDLTHPVELVLPPELSSG*
JGI10216J12902_1108947284	3300000956	Soil	MPVYGLIITLSDVELTAEQSERVLPAIDRVFGSDVTTEVSTSGPYHLWRLTDTIQAPTMLEAAEAVIRMAREARDVAGIHPGQAVGFSSQLRDLTHPVELVLPPETRPR*
JGI25405J52794_100322721	3300003911	Tabebuia Heterophylla Rhizosphere	MPIYGLAITLSDVELSDEQSQRVLPALARVFGTDATTEVAATGRYHVWRVTHTIDAPTMLQAAEDVLRMAREAREAAGIHPGQAVGFSSQLRDLTHPHLSDGGTPEIRVERGSASDPGASPER*
Ga0062595_1002755662	3300004479	Soil	MPIYGLVITLSDLELTGEQSERVRPALDHVFGSDATTEVSSSGPYHLWRLTHTIDAPTMLDAAETVIRMAREAREEAGIAPGQAVGFSSQLRDLTHPIEMVLPPETDRG*
Ga0070670_1000401898	3300005331	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDPGADSER*
Ga0066388_1078057901	3300005332	Tropical Forest Soil	VELSAEQSERLLPALNSAFGSHSTSEVSTSGPYHLWRLTDVIQAPTMLEAAETVIRMARPARNAAGIDPAQAVGFSSQLRDLTHPVELVWPTETPPR*
Ga0070691_105624932	3300005341	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLAITLSDAELSTEQSERVLPALASVFGTDDITEVATWGRYHVWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQAVGFSSQLRD
Ga0070692_100741332	3300005345	Corn, Switchgrass And Miscanthus Rhizosphere	LVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER*
Ga0070675_1004365502	3300005354	Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER*
Ga0070659_1000862934	3300005366	Corn Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER*
Ga0070659_1018051692	3300005366	Corn Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIPMAREARDTAGIHPGQAVGFSSQLR
Ga0070700_1002396091	3300005441	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDSGADSER*
Ga0068867_1008688582	3300005459	Miscanthus Rhizosphere	MPIYGLVITLSDAELSSQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEDVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER*
Ga0070699_1007952851	3300005518	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFEGGSASDPGADSER*
Ga0070702_1013236751	3300005615	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLAITLSDAELSTEQSERVLPALASVFGTDDITEVATWGRYHVWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQAVGFSSQLRDLTHPHELVFPMGETRPRSEFERGSPFDPGADSER*
Ga0066905_1010191361	3300005713	Tropical Forest Soil	MPIYGLAITLSDVELSAEQSERVLPVLARVFGAEAMTEVASGRYHIWRLTHTIEASTMHEAAEDVIRKAREVRDAAGIHPGQAVGFSCQLKDLTHPHDLDVPAETRPS*
Ga0081455_102384613	3300005937	Tabebuia Heterophylla Rhizosphere	MPIYGLAVTLSDIELTAEESERVLPAVSSVFGTDAMTEVATSGRYHFCRLIHTIEAPTMHDAAEDVIRMAQEARDAAGIHPEQAVGFSAQLRDLTHPHEPVFPSETPPST*
Ga0074047_112376101	3300006576	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERESASDPGADSEQ*
Ga0075428_1011929252	3300006844	Populus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLR
Ga0075430_1000847272	3300006846	Populus Rhizosphere	VEMPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER*
Ga0075433_100591282	3300006852	Populus Rhizosphere	MPVYGLVITLSDVQLTAEQSERVLPSLDRVFGPDATAEVATTGPYHLWRLTDTIQAPTMLEAAEAVIQKAREAREVAGIRPGQGVGFSYQLRDLTHPVELLLPAETSLG*
Ga0075433_111499021	3300006852	Populus Rhizosphere	MPIYGLVITLSDVELTADQSERMRPALDRVFGSDATTEVSSSGPYHLWRLTWTIDAPTMLDAAETVIRMAREAREEAGIDPGQAVGFSSQLRDLTHPIEMVLPPETGRG*
Ga0075434_1005433132	3300006871	Populus Rhizosphere	MPIYGLVITLSDVELTADQSERMRPALDRVFGSDATTEVSSSGPYHLWRLTWTIDAPTMLDAAETVIRMAREARGEAGIDPGQAVGFSSQLRDLTHPIEMVLPPETGRG*
Ga0075434_1019947581	3300006871	Populus Rhizosphere	MPFYGLVITLSDVQLTAEQSERVRPALDRVFGSDATTEVSSSGPYHLWRLTHTIEAPTMLDAAEAVIRMAREAREEAGIAPGQAVGFSSQLRDLTHPVEMVLPPQTRSG*
Ga0075435_1003406031	3300007076	Populus Rhizosphere	RMRPALDRVFGSDATTEVSSSGPYHLWRLTWTIDAPTMLDAAETVIRMAREAREEAGIDPGQAVGFSSQLRDLTHPIEMVLPPETGRG*
Ga0075435_1019714992	3300007076	Populus Rhizosphere	VPVYGLVITLSDVELTPDQSERMRPALDRVFGSDATTEVSSSGSYHLWRLTWTIDAPTMLDAAETVIRMAREARGEAGIDPGQAVGFSSQLRDLTHP
Ga0111539_110892642	3300009094	Populus Rhizosphere	MLEMPVYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGET
Ga0111539_125626651	3300009094	Populus Rhizosphere	MPIYGLAITLSDAQLSTEQSERLLPALVSVFGTDDITEVANTGNYHVWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPIGETRPRSGSERGSPFDPGAGSER*
Ga0114129_100827085	3300009147	Populus Rhizosphere	MPVYGLVITLSDVQLTAEQSERVLPALDRVFGPDATAEVATTGPYHLWRLTDTIQAPTMLEAAEAVIQKAREAREVAGIRPGQGVGFSYQLRDLTHPVELLLPAETSLG*
Ga0111538_110032612	3300009156	Populus Rhizosphere	MLEMPVYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFEQGSASDPGA
Ga0105092_100125193	3300009157	Freshwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGTIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADPEQ*
Ga0105104_108786411	3300009168	Freshwater Sediment	TQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAAGTIRLALEARDAAGIHPGQAVGFSSQLRDLSHPHELVLPMGETRPGSGFERGSASDPGADSEQ*
Ga0105252_104438521	3300009678	Soil	HVEMPIYGLAITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ*
Ga0105084_10926871	3300009811	Groundwater Sand	MPICGLAITLSDAELSTQQSERVLPALASVFGTDAMTEVATWGGRYHMWRLTHTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPRELVFPMGETRPRSGFERGSASDPGADSEQ*
Ga0105072_10707841	3300009818	Groundwater Sand	MPIYGLVITLSDAELSTQQSERVLPALASVFGTGAMTEVATWGGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMG
Ga0105074_10812341	3300010029	Groundwater Sand	MPIYGLVITLSDAELSTQQSERVLPALASVFGTDAMTEVATWGGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGAVSEQ*
Ga0134122_103035381	3300010400	Terrestrial Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGDTRPRSGFERGSASDPGADSEQ*
Ga0137424_10101232	3300011412	Soil	MPIYGLAITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEAMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSLFDPGSASDPGADSEE*
Ga0137436_11384581	3300011423	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQTVGFSSQ
Ga0137432_12882801	3300011439	Soil	QQSERVLPALAGAFGTDAITEVATWGRYHVWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADPER*
Ga0137433_10114313	3300011440	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ*
Ga0157282_104101971	3300012904	Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPGSLFDPGSASDPGPDSE
Ga0126375_112652221	3300012948	Tropical Forest Soil	MPAYGLVITLSDVELTAEQSERLLPALDSAFGSHSTSEVSTSGPYHLWRVTDVIQAASMLEAAETVIRMAREVRAAAGIDPAQAVGFSSQLRDLTHPIESVLPPETRPR
Ga0126375_115606241	3300012948	Tropical Forest Soil	MPIYGLAITLSDVELSAEQSQRVPPAVARVFGTEAMTEVSSGRYHIWRLTHTIEAPSMHEAAEDVIRKAREVRDTAGIHPGQAVGFSCQLRDL
Ga0164299_113157871	3300012958	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGAISEQ*
Ga0163162_121476431	3300013306	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREAREAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER*
Ga0157380_102994944	3300014326	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHE
Ga0157380_134156691	3300014326	Switchgrass Rhizosphere	SERVLPALAGAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER*
Ga0157379_123045341	3300014968	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVV
Ga0132258_107562992	3300015371	Arabidopsis Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ*
Ga0132258_112525284	3300015371	Arabidopsis Rhizosphere	MLRMPIYGLAITLSDAQLSTEQSERVLPALVSVFGTDDITEVANTGSYHVWRLTHTIEAPTMLDAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDL
Ga0132258_122445462	3300015371	Arabidopsis Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAATEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER*
Ga0132256_1002073003	3300015372	Arabidopsis Rhizosphere	MPIYGLAITLSDAQLSTEQSERLLPALVSVFGTDDITEVANTGNYHVWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPIGETRPRSGSERGSPSDPGAGSER*
Ga0132257_1011535821	3300015373	Arabidopsis Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDSGADSER*
Ga0132257_1029799571	3300015373	Arabidopsis Rhizosphere	DMPIYGLVITLSDAELSTQQSDRVLPALASAFGTDAATDVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER*
Ga0132255_1002146014	3300015374	Arabidopsis Rhizosphere	MPIYGLAITLSDAQLSTEQSERLLPALVSVFGTDDITEVANTGNYHVWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPIGETRPRSGSERGSPSDPGADSER*
Ga0132255_1038155031	3300015374	Arabidopsis Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAD
Ga0184616_101617632	3300018055	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHDLVFPMGETRPRSGFERGSASDPGADSER
Ga0184624_104715011	3300018073	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQTVGFSSQLRDLSHPHEVVFPMGETRPRSGF
Ga0184625_100303184	3300018081	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEDMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPIGETRPRSGFERGSAPDPGADSEQ
Ga0184628_103595372	3300018083	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWDRYHMWRLTHTIEAPTMLEAAEAMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGAISEQ
Ga0190270_100309502	3300018469	Soil	MPIYGLAITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPIGETRPRSGFERGSASDPGADSEQ
Ga0190267_116899581	3300019767	Soil	MPIYGLAITLSDAELSTQQSERVLPALASAFGTDAMTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMG
Ga0193697_10355541	3300020005	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAESMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPTSGFERGSASDPGADSEQ
Ga0193696_10139682	3300020016	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAESMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPTSGFERGPASDPGADSEQ
Ga0224452_10195263	3300022534	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLAHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQTVGFSFQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ
Ga0222622_100647984	3300022756	Groundwater Sediment	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQTVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDPGADSEQ
Ga0207713_12240131	3300025735	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDPGADSER
Ga0207647_100028082	3300025904	Corn Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER
Ga0207659_107556962	3300025926	Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGF
Ga0207659_111762851	3300025926	Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGISSQLRDLSHP
Ga0207706_111522811	3300025933	Corn Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDPGADSER
Ga0207668_116880281	3300025972	Switchgrass Rhizosphere	MSIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPGSLFDPGSASDPGADSER
Ga0207708_1000990010	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPRSGFERGSASDSGADSER
Ga0207708_100941312	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MPIYGLAITLSDAELSTEQSERVLPALASVFGTDDITEVATWGRYHVWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ
Ga0207708_103590442	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	DAELSTQQSERVLPALSSAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER
Ga0207648_120883341	3300026089	Miscanthus Rhizosphere	LSDAELSTEQSERVLPALASVFGTDDITEVATWGRYHVWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFEQGSASDPGADSER
Ga0209814_100009209	3300027873	Populus Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMEETRPRSGFERGSASDPGADSER
Ga0268264_102448713	3300028381	Switchgrass Rhizosphere	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQRSGSRRS
Ga0247821_109228991	3300028596	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPTGETRPRSGFERGSASDPGADSER
Ga0307301_100189462	3300028719	Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLAHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQTVGFSFQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ
Ga0307316_103466001	3300028755	Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQTVGFSFQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSEQ
Ga0307320_102074952	3300028771	Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHEVVFPMGETRPGSLFDPGP
Ga0307281_104397121	3300028803	Soil	LSDAELSTQQSERVLPALASAFGTDAIAEVATWGRYHMWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQTVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGAGSEQ
Ga0247826_106452962	3300030336	Soil	MPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDTAGIHPGQAVGFSSQLRDLSHPHELVFPTGETRPRSGFERGSASDPGADSER
Ga0307497_104951782	3300031226	Soil	LSDAELSTQQSEHVLPALASAFGTDAITEVATWDRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIRPGQAVGFSSQLRDLSHPHELVFPSGETRPKSGFERGSASDPGADSER
Ga0310886_100617972	3300031562	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ
Ga0307468_1000412271	3300031740	Hardwood Forest Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRLRSGFERGSASDPGADSE
Ga0307473_113068952	3300031820	Hardwood Forest Soil	MPIYGLAITLSDAELSPQQSERVLPALASAFGTDDIAEVATSGRYHVWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSH
Ga0310904_104225862	3300031854	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ
Ga0310892_105088081	3300031858	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAV
Ga0310891_100824571	3300031913	Soil	MPIYGLAITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ
Ga0310885_100291404	3300031943	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGAISEQ
Ga0310897_105513261	3300032003	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRP
Ga0310899_101073461	3300032017	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGF
Ga0310890_107517731	3300032075	Soil	HVEMPIYGLVITLSDAELSTQQSERVLPALAGAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASDPGADSER
Ga0310895_102862471	3300032122	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPR
Ga0307470_103956921	3300032174	Hardwood Forest Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRS
Ga0310889_107601061	3300032179	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGRYHMWRLTHTIEAPTMLEAAEGVLRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPKGETRPRSGFERGSASDPGAISEQ
Ga0307471_1013343271	3300032180	Hardwood Forest Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGFERESASDPGADSEQ
Ga0247829_103425221	3300033550	Soil	MPIYGLVITLSDAELSTQQSERVLPALASAFGTDAVTEVATWGGRYHMWRLTNTIEAPTMLEAAEGVIRMARQARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGE
Ga0364937_037975_9_392	3300034113	Sediment	MPIYGLAITLSDAELSTQQSERVLPALAGAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEGVIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMVETRPRSGFERGSASDPGADSER
Ga0364945_0229083_231_569	3300034115	Sediment	MPIYGLVITLSDAELSTKQSERVLPALASAFGTDAIAEVATWGRYHMWRLTHTIEAPTMLEAAEGMIRMAREARDAAGIHPGQAVGFSSQLRDLSHPHELVFPMGETRPRSGF
Ga0364931_0333101_1_363	3300034176	Sediment	MPIYGLVITLSDAELSTKQSERVLPALASAFGTDAITEVATWGRYHMWRLTHTIEAPTMLEAAEDVIRMAREARDAAGIHPGQTVGFSSQLRDLSHPHELVFPMGETRPRSGFERGSASD

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084202

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences