Metagenome Family F084055

Basic Information
Family ID	F084055
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	45 residues
Representative Sequence	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGG
Number of Associated Samples	101
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	100.00 %
% of genes near scaffold ends (potentially truncated)	91.07 %
% of genes from short scaffolds (< 2000 bps)	91.96 %
Associated GOLD sequencing projects	97
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.40

Most Common Taxonomy
Group	Bacteria (51.786 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil (20.536 % of family members)
Environment Ontology (ENVO)	Unclassified (25.893 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (48.214 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 21.62% β-sheet: 0.00% Coil/Unstructured: 78.38%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00248	Aldo_ket_red	5.36
PF06803	DUF1232	4.46
PF00583	Acetyltransf_1	2.68
PF00903	Glyoxalase	1.79
PF00266	Aminotran_5	1.79
PF00211	Guanylate_cyc	1.79
PF03069	FmdA_AmdA	1.79
PF02803	Thiolase_C	1.79
PF03733	YccF	1.79
PF04191	PEMT	0.89
PF02129	Peptidase_S15	0.89
PF14681	UPRTase	0.89
PF00754	F5_F8_type_C	0.89
PF13560	HTH_31	0.89
PF11769	DUF3313	0.89
PF00990	GGDEF	0.89
PF03575	Peptidase_S51	0.89
PF01548	DEDD_Tnp_IS110	0.89
PF03193	RsgA_GTPase	0.89
PF07883	Cupin_2	0.89
PF12697	Abhydrolase_6	0.89
PF00216	Bac_DNA_binding	0.89
PF04892	VanZ	0.89
PF00561	Abhydrolase_1	0.89
PF00106	adh_short	0.89
PF05239	PRC	0.89
PF03551	PadR	0.89
PF00293	NUDIX	0.89
PF01979	Amidohydro_1	0.89
PF01243	Putative_PNPOx	0.89
PF10648	Gmad2	0.89
PF02311	AraC_binding	0.89
PF01609	DDE_Tnp_1	0.89
PF02371	Transposase_20	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG3339	Uncharacterized membrane protein YkvA, DUF1232 family	Function unknown [S]	4.46
COG0183	Acetyl-CoA acetyltransferase	Lipid transport and metabolism [I]	1.79
COG2114	Adenylate cyclase, class 3	Signal transduction mechanisms [T]	1.79
COG2421	Acetamidase/formamidase	Energy production and conversion [C]	1.79
COG3304	Uncharacterized membrane protein YccF, DUF307 family	Function unknown [S]	1.79
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.79
COG0776	Bacterial nucleoid DNA-binding protein IHF-alpha	Replication, recombination and repair [L]	0.89
COG1162	Ribosome biogenesis GTPase RsgA	Translation, ribosomal structure and biogenesis [J]	0.89
COG1695	DNA-binding transcriptional regulator, PadR family	Transcription [K]	0.89
COG1733	DNA-binding transcriptional regulator, HxlR family	Transcription [K]	0.89
COG1846	DNA-binding transcriptional regulator, MarR family	Transcription [K]	0.89
COG3039	Transposase and inactivated derivatives, IS5 family	Mobilome: prophages, transposons [X]	0.89
COG3293	Transposase	Mobilome: prophages, transposons [X]	0.89
COG3385	IS4 transposase InsG	Mobilome: prophages, transposons [X]	0.89
COG5421	Transposase	Mobilome: prophages, transposons [X]	0.89
COG5433	Predicted transposase YbfD/YdcC associated with H repeats	Mobilome: prophages, transposons [X]	0.89
COG5659	SRSO17 transposase	Mobilome: prophages, transposons [X]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.79 %
Unclassified	root	N/A	48.21 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	43.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	33.93 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	1.79 %
Alphaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria	0.89 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	24.11 %
Dehalococcoidia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia	0.89 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.89 %
Acidimicrobiia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia	0.89 %
Hyphomicrobiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	17.86 %
unclassified Dehalococcoidia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %
Phyllobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae	0.89 %
Acidimicrobiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	0.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.86 %
Acidimicrobiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	0.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.89 %
Intrasporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.86 %
unclassified Acidimicrobiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae	0.89 %
Lentzea	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Tetrasphaera	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.86 %
Lentzea jiangxiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea jiangxiensis	0.89 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.89 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	0.89 %
Tetrasphaera japonica	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.21 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	17.86 %
Tetrasphaera japonica T1-X7	strain	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	0.89 %
Streptomyces sp. KY75	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	0.89 %
Lentzea jiangxiensis	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea jiangxiensis	0.89 %
Acidimicrobiaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	0.89 %
Dehalococcoidia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	0.89 %
Mesorhizobium	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	0.89 %
Actinomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2189573002\|GZIGXIF02GKQIG	Not Available	501	Open in IMG/M
3300000890\|JGI11643J12802_12048440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	731	Open in IMG/M
3300000953\|JGI11615J12901_10615053	All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Phyllobacteriaceae → Mesorhizobium	508	Open in IMG/M
3300000955\|JGI1027J12803_104559177	Not Available	526	Open in IMG/M
3300000956\|JGI10216J12902_111598195	Not Available	606	Open in IMG/M
3300004156\|Ga0062589_100727539	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Actinomycetales	886	Open in IMG/M
3300004479\|Ga0062595_101676937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	597	Open in IMG/M
3300005177\|Ga0066690_11032153	Not Available	515	Open in IMG/M
3300005329\|Ga0070683_101566184	Not Available	633	Open in IMG/M
3300005332\|Ga0066388_102812792	Not Available	889	Open in IMG/M
3300005334\|Ga0068869_100751887	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	835	Open in IMG/M
3300005337\|Ga0070682_100013906	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	4641	Open in IMG/M
3300005343\|Ga0070687_100571691	All Organisms → cellular organisms → Bacteria	772	Open in IMG/M
3300005444\|Ga0070694_100898428	Not Available	731	Open in IMG/M
3300005446\|Ga0066686_10445309	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	884	Open in IMG/M
3300005455\|Ga0070663_100533905	Not Available	978	Open in IMG/M
3300005467\|Ga0070706_101561647	Not Available	602	Open in IMG/M
3300005468\|Ga0070707_100907010	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	846	Open in IMG/M
3300005546\|Ga0070696_101271996	Not Available	624	Open in IMG/M
3300005549\|Ga0070704_100385106	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1192	Open in IMG/M
3300005575\|Ga0066702_10820839	Not Available	554	Open in IMG/M
3300005764\|Ga0066903_100163221	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3236	Open in IMG/M
3300005764\|Ga0066903_107934453	Not Available	545	Open in IMG/M
3300005842\|Ga0068858_101214345	Not Available	741	Open in IMG/M
3300006038\|Ga0075365_10107095	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1919	Open in IMG/M
3300006046\|Ga0066652_101045444	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	774	Open in IMG/M
3300006755\|Ga0079222_12248588	Not Available	543	Open in IMG/M
3300006806\|Ga0079220_10684882	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300006852\|Ga0075433_10003255	All Organisms → cellular organisms → Bacteria	12540	Open in IMG/M
3300006871\|Ga0075434_101414104	Not Available	705	Open in IMG/M
3300006903\|Ga0075426_11252416	Not Available	563	Open in IMG/M
3300007076\|Ga0075435_101793681	All Organisms → cellular organisms → Bacteria → Terrabacteria group	539	Open in IMG/M
3300009147\|Ga0114129_10467305	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1652	Open in IMG/M
3300009148\|Ga0105243_12649266	Not Available	541	Open in IMG/M
3300009148\|Ga0105243_13081313	Not Available	505	Open in IMG/M
3300009162\|Ga0075423_10103288	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2983	Open in IMG/M
3300009162\|Ga0075423_12643672	All Organisms → cellular organisms → Bacteria → Terrabacteria group	549	Open in IMG/M
3300009176\|Ga0105242_10078069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2763	Open in IMG/M
3300010333\|Ga0134080_10380539	Not Available	649	Open in IMG/M
3300010366\|Ga0126379_12399323	Not Available	627	Open in IMG/M
3300010373\|Ga0134128_10077616	Not Available	3796	Open in IMG/M
3300010373\|Ga0134128_12333141	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	589	Open in IMG/M
3300010375\|Ga0105239_12689738	Not Available	580	Open in IMG/M
3300010401\|Ga0134121_12384961	Not Available	569	Open in IMG/M
3300011003\|Ga0138514_100004355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2028	Open in IMG/M
3300012008\|Ga0120174_1043761	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1267	Open in IMG/M
3300012199\|Ga0137383_11282344	Not Available	523	Open in IMG/M
3300012199\|Ga0137383_11283033	Not Available	523	Open in IMG/M
3300012204\|Ga0137374_10478997	Not Available	971	Open in IMG/M
3300012206\|Ga0137380_11298188	Not Available	613	Open in IMG/M
3300012207\|Ga0137381_11743848	Not Available	512	Open in IMG/M
3300012912\|Ga0157306_10073305	All Organisms → cellular organisms → Bacteria	926	Open in IMG/M
3300012951\|Ga0164300_10338711	Not Available	803	Open in IMG/M
3300012955\|Ga0164298_10703995	Not Available	709	Open in IMG/M
3300012958\|Ga0164299_10405246	All Organisms → cellular organisms → Bacteria → Terrabacteria group	878	Open in IMG/M
3300012960\|Ga0164301_10392069	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	969	Open in IMG/M
3300012985\|Ga0164308_12185837	All Organisms → cellular organisms → Bacteria → Terrabacteria group	515	Open in IMG/M
3300012988\|Ga0164306_11227005	Not Available	630	Open in IMG/M
3300012989\|Ga0164305_10317687	Not Available	1158	Open in IMG/M
3300013294\|Ga0120150_1023589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1247	Open in IMG/M
3300013306\|Ga0163162_11433664	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	786	Open in IMG/M
3300015261\|Ga0182006_1099959	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	1031	Open in IMG/M
3300015371\|Ga0132258_11920338	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Intrasporangiaceae → Tetrasphaera → Tetrasphaera japonica → Tetrasphaera japonica T1-X7	1490	Open in IMG/M
3300015374\|Ga0132255_100856282	All Organisms → cellular organisms → Bacteria	1357	Open in IMG/M
3300015374\|Ga0132255_105853027	All Organisms → cellular organisms → Bacteria → Terrabacteria group	520	Open in IMG/M
3300017974\|Ga0187777_11317001	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Acidimicrobiia → Acidimicrobiales → Acidimicrobiaceae → unclassified Acidimicrobiaceae → Acidimicrobiaceae bacterium	531	Open in IMG/M
3300018027\|Ga0184605_10323031	Not Available	698	Open in IMG/M
3300018027\|Ga0184605_10330082	Not Available	689	Open in IMG/M
3300018032\|Ga0187788_10033169	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1698	Open in IMG/M
3300018433\|Ga0066667_10914745	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	755	Open in IMG/M
3300018465\|Ga0190269_10044391	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2039	Open in IMG/M
3300019362\|Ga0173479_10777700	Not Available	527	Open in IMG/M
3300020002\|Ga0193730_1103705	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	790	Open in IMG/M
3300023064\|Ga0247801_1040314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Lentzea → Lentzea jiangxiensis	691	Open in IMG/M
3300025911\|Ga0207654_10647079	Not Available	757	Open in IMG/M
3300025922\|Ga0207646_10017709	All Organisms → cellular organisms → Bacteria	6658	Open in IMG/M
3300025934\|Ga0207686_10882408	All Organisms → cellular organisms → Bacteria → Terrabacteria group	721	Open in IMG/M
3300025935\|Ga0207709_11719843	Not Available	521	Open in IMG/M
3300025935\|Ga0207709_11860475	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	501	Open in IMG/M
3300025945\|Ga0207679_11826621	Not Available	555	Open in IMG/M
3300025981\|Ga0207640_11325327	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	643	Open in IMG/M
3300026312\|Ga0209153_1278876	Not Available	534	Open in IMG/M
3300026547\|Ga0209156_10160931	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1085	Open in IMG/M
3300026550\|Ga0209474_10539849	Not Available	592	Open in IMG/M
3300027857\|Ga0209166_10218341	Not Available	1020	Open in IMG/M
3300028380\|Ga0268265_12314593	Not Available	544	Open in IMG/M
3300028592\|Ga0247822_10495013	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300028716\|Ga0307311_10034584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1310	Open in IMG/M
3300028717\|Ga0307298_10027041	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1511	Open in IMG/M
3300028717\|Ga0307298_10183083	Not Available	614	Open in IMG/M
3300028778\|Ga0307288_10024547	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1957	Open in IMG/M
3300028784\|Ga0307282_10069193	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1601	Open in IMG/M
3300028796\|Ga0307287_10342232	Not Available	564	Open in IMG/M
3300028807\|Ga0307305_10112890	All Organisms → cellular organisms → Bacteria → Terrabacteria group	1255	Open in IMG/M
3300028807\|Ga0307305_10320353	Not Available	705	Open in IMG/M
3300028814\|Ga0307302_10239762	Not Available	888	Open in IMG/M
3300028819\|Ga0307296_10392321	Not Available	758	Open in IMG/M
3300028828\|Ga0307312_10176072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. KY75	1367	Open in IMG/M
3300028884\|Ga0307308_10145439	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1134	Open in IMG/M
3300031543\|Ga0318516_10305896	Not Available	919	Open in IMG/M
3300031680\|Ga0318574_10840254	Not Available	538	Open in IMG/M
3300031747\|Ga0318502_10698212	Not Available	613	Open in IMG/M
3300031859\|Ga0318527_10167048	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	927	Open in IMG/M
3300031893\|Ga0318536_10661305	All Organisms → cellular organisms → Bacteria → Terrabacteria group	521	Open in IMG/M
3300031896\|Ga0318551_10541667	Not Available	669	Open in IMG/M
3300031938\|Ga0308175_100767492	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → Dehalococcoidia → unclassified Dehalococcoidia → Dehalococcoidia bacterium	1052	Open in IMG/M
3300032001\|Ga0306922_12064601	Not Available	553	Open in IMG/M
3300032025\|Ga0318507_10430726	Not Available	574	Open in IMG/M
3300032075\|Ga0310890_10287743	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1175	Open in IMG/M
3300032180\|Ga0307471_101556341	Not Available	818	Open in IMG/M
3300032782\|Ga0335082_10571179	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	992	Open in IMG/M
3300032782\|Ga0335082_11101352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	660	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	75.89%
Host-Associated	Host-Associated	24.11%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	74.11%
Plants	Host-Associated → Plants	24.11%
Aquatic	Environmental → Aquatic	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	73.21%
Rhizosphere	Host-Associated → Plants → Rhizosphere	16.07%
Rhizoplane	Host-Associated → Plants → Rhizoplane	7.14%
Sediment	Environmental → Aquatic → Sediment	1.79%
Agricultural Field	Environmental → Terrestrial → Agricultural Field	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.93%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	14.29%
Loam	Environmental → Terrestrial → Soil → Loam	10.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	4.46%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	3.57%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Soil	Host-Associated → Plants → Rhizosphere → Soil	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified	0.89%
Bulk Soil	Host-Associated → Plants → Roots → Bulk Soil	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	31.25%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	14.29%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	10.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	8.04%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	8.04%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	4.46%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	4.46%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	3.57%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	1.79%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	1.79%
Unclassified	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Bulk Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	20.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	9.82%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	6.25%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	6.25%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	5.36%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	5.36%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	4.46%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	2.68%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	2.68%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Permafrost	1.79%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	1.79%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	1.79%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	1.79%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	0.89%
Grass Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grass Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	0.89%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Agricultural Field → Unclassified → Unclassified → Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Populus Endosphere	Host-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2189573002	Grass soil microbial communities from Rothamsted Park, UK - FE1 (NaCl 30g/L 5ml)	Environmental	Open in IMG/M
3300000890	Soil microbial communities from Great Prairies - Iowa, Continuous Corn soil	Environmental	Open in IMG/M
3300000953	Soil microbial communities from Great Prairies - Kansas Corn soil	Environmental	Open in IMG/M
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300004156	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Combined assembly of AARS Block 1	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005334	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M5-2	Host-Associated	Open in IMG/M
3300005337	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3L metaG	Environmental	Open in IMG/M
3300005343	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG	Environmental	Open in IMG/M
3300005444	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaG	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005455	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG	Host-Associated	Open in IMG/M
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005842	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2	Host-Associated	Open in IMG/M
3300006038	Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006755	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter	Environmental	Open in IMG/M
3300006806	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS100	Environmental	Open in IMG/M
3300006852	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300007076	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4	Host-Associated	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009176	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG	Host-Associated	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010375	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG	Host-Associated	Open in IMG/M
3300010401	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-1	Environmental	Open in IMG/M
3300011003	Agricultural soil microbial communities from Tamara ranch near Red Deer, Alberta, Canada - d1t9i015	Environmental	Open in IMG/M
3300012008	Permafrost microbial communities from Nunavut, Canada - A39_80cm_12M	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012912	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S163-409C-2	Environmental	Open in IMG/M
3300012951	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MG	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012958	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_221_MG	Environmental	Open in IMG/M
3300012960	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300012988	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_242_MG	Environmental	Open in IMG/M
3300012989	Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG	Environmental	Open in IMG/M
3300013294	Permafrost microbial communities from Nunavut, Canada - A3_65cm_0M	Environmental	Open in IMG/M
3300013306	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S5-5 metaG	Host-Associated	Open in IMG/M
3300015261	Rhizosphere microbial communities from Sorghum bicolor, Mead, Nebraska, USA - 072115-104_1 MetaG	Host-Associated	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015374	Col-0 rhizosphere combined assembly	Host-Associated	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018027	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_coex	Environmental	Open in IMG/M
3300018032	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_BV01_MP10_20_MG	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018465	Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 IS	Environmental	Open in IMG/M
3300019362	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2)	Environmental	Open in IMG/M
3300020002	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1a1	Environmental	Open in IMG/M
3300023064	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S001-104B-6	Environmental	Open in IMG/M
3300025911	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025935	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025945	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026547	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124 (SPAdes)	Environmental	Open in IMG/M
3300026550	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028592	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 13C_Cellulose_Day30	Environmental	Open in IMG/M
3300028716	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_198	Environmental	Open in IMG/M
3300028717	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158	Environmental	Open in IMG/M
3300028778	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_142	Environmental	Open in IMG/M
3300028784	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_121	Environmental	Open in IMG/M
3300028796	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_141	Environmental	Open in IMG/M
3300028807	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_186	Environmental	Open in IMG/M
3300028814	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300028884	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031859	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031938	Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.C.R1	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032075	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T20D3	Environmental	Open in IMG/M
3300032180	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_515	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.40
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.40
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084055

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
FE1_07126800	2189573002	Grass Soil	MYALVVRVTIHNVDRTRDVLNNQVVPQVSGAPGFKAGYWTWGTGGGVTNGL
JGI11643J12802_120484402	3300000890	Soil	MHALVVRATIHNADRTREVLKSQVVPQASGAPGFKAGYWTWPTGEGELNVL
JGI11615J12901_106150532	3300000953	Soil	MHAVVVRATIHNADRTREVLNSQVVPQASGAPGFKAGYWTWP
JGI1027J12803_1045591772	3300000955	Soil	MHALVVRVTIHNADRTREVLNSQVVPGVSGAPGFEAGYWTWSTG
JGI10216J12902_1115981952	3300000956	Soil	MHSLVVRAAIHNADRTRQVLNSQVVPQVSSAPGFKAGYWTWSTGEG
Ga0062589_1007275391	3300004156	Soil	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGEG
Ga0062595_1016769372	3300004479	Soil	MHALVVRVTIHNADRTRQVLNSQVVPRVSGAPGFKAGYWTWSTGG
Ga0066690_110321531	3300005177	Soil	MHALVVRVTINNADRTREVLNSQVVPQVSGAPGFKTGYWTWSAGGGE
Ga0070683_1015661842	3300005329	Corn Rhizosphere	MHAVVVRVTIHNADRTRQVLTGQVVPQVSGATGFKSGYWTWSTGSGDLNGLS
Ga0066388_1028127922	3300005332	Tropical Forest Soil	MHALVVHGSIHNADRAREILDSQVVSLASGAPGFSAGYWTWPTGEGELNV
Ga0068869_1007518872	3300005334	Miscanthus Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWSTGGGESNGL
Ga0070682_1000139064	3300005337	Corn Rhizosphere	MHALVVRLIIHDADRTREVLDSQVVPQVSGAPGFQTGYWTWSSGGGELKGSR*
Ga0070687_1005716912	3300005343	Switchgrass Rhizosphere	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFKTGYWTWSSGGELNGLSMIIF
Ga0070694_1008984281	3300005444	Corn, Switchgrass And Miscanthus Rhizosphere	MHALVVRVTIHNADRTRELLNSQVVPQVSGAPGFKTGYWTWPTGGGELNGL
Ga0066686_104453092	3300005446	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKAGYWTWATGGGET
Ga0070663_1005339053	3300005455	Corn Rhizosphere	MHALVVRLIIHDADRTREVLDSQVVPQVSGAPGFQTGYWRWSSGGGELKGSR*
Ga0070706_1015616471	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGGE
Ga0070707_1009070101	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWSTGGG
Ga0070696_1012719963	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	MHALVTRVTIHNADATREALNSQVVPGISGAPGFKTGYWTW
Ga0070704_1003851061	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGG
Ga0066702_108208391	3300005575	Soil	MHALVVRVNIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWSTGGGELNGLSMI
Ga0066903_1001632211	3300005764	Tropical Forest Soil	MHALVVRVTIHDADSTGEVLRSEVVPQVTAAPGFKAGYWTWSSGG
Ga0066903_1079344531	3300005764	Tropical Forest Soil	MHALVVRGTIHDAERTREVLNGQVVLLASGAPGFKAG
Ga0068858_1012143452	3300005842	Switchgrass Rhizosphere	MHAVVVRVTIHNADRTREVLTSQVVPQISAAPGFKSG
Ga0075365_101070954	3300006038	Populus Endosphere	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFKTGYWTWS
Ga0066652_1010454443	3300006046	Soil	MHACVVRVTIHNADRTREVLNSQVVPQVSGAPGFKA
Ga0079222_122485881	3300006755	Agricultural Soil	MHAVVVRVTIHNADRTREVLTGQVVPQVSGATGFKSGYWTWSTGSG
Ga0079220_106848821	3300006806	Agricultural Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWATGGGGLNGLSMIV
Ga0075433_100032558	3300006852	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGEGD*
Ga0075434_1014141044	3300006871	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGEGE
Ga0075426_112524162	3300006903	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVVPQASGAPGFKAGYWT
Ga0075435_1017936812	3300007076	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGEGEL
Ga0114129_104673052	3300009147	Populus Rhizosphere	MHALVVRVTIHDAHRTREVLNGQVVPQLSGAPGFKTGYWTWSTGGEL
Ga0105243_126492662	3300009148	Miscanthus Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYW
Ga0105243_130813131	3300009148	Miscanthus Rhizosphere	MHALVVRVTIHNADRTREMLTGQVVPQASGAPGFKTGYWTWPT
Ga0075423_101032881	3300009162	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGE
Ga0075423_126436721	3300009162	Populus Rhizosphere	MHALVVRATIHNADRTREVLNSQVLPQASGAPGFKAGYWTWPTGEGELN
Ga0105242_100780691	3300009176	Miscanthus Rhizosphere	MHALVVRLIIHDADRTREVLDSQVVPQVSGAPGFQTGYWRWSSGGGEL
Ga0134080_103805391	3300010333	Grasslands Soil	MYALVVRVTIHNADRTREVLNSQVVPQVSGAPGFTAGYWTWATGGGGDERSLDDHL*
Ga0126379_123993231	3300010366	Tropical Forest Soil	MHAVVVRVNIHNADRTREVLNSQVVPQVSGAPGFEAGY
Ga0134128_100776161	3300010373	Terrestrial Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGGETNGLSMV
Ga0134128_123331411	3300010373	Terrestrial Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGHWTWITGGGE
Ga0105239_126897381	3300010375	Corn Rhizosphere	MHAVVVRVTIHNADRTRQVLTGQVVPQVSGATGFK
Ga0134121_123849611	3300010401	Terrestrial Soil	MHALVVRLIIHDADRTREVLDSQVVPQVSGAPGFQTGYWTWASGGGELKGSR*
Ga0138514_1000043551	3300011003	Soil	MHALVVQVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGGETNGLS
Ga0120174_10437611	3300012008	Permafrost	MHALVVRVTIHDVDRTREVLNSQVVPQASGAPGFKAGYWTWSTGGGES
Ga0137383_112823441	3300012199	Vadose Zone Soil	MHALVVRVTIDDADRTREVLKTQVVPQASGAPGFKTGYWTW
Ga0137383_112830332	3300012199	Vadose Zone Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGE
Ga0137374_104789973	3300012204	Vadose Zone Soil	MHALVVHVTIHNADRTRELLNSQVVPQVSGAPGFK
Ga0137380_112981881	3300012206	Vadose Zone Soil	MHALVVRVTIHNADRTREVLNNQVVPQVSGAPGFKTGYWTWPTGGGELNGLS
Ga0137381_117438481	3300012207	Vadose Zone Soil	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKSGYWTWSTDGGQLNGLSMVI
Ga0157306_100733052	3300012912	Soil	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFKTGYWTW
Ga0164300_103387111	3300012951	Soil	MHAVVVRVTIHNADRTREVLNGRVVPQVSGAPGFKAGYWTWSTG
Ga0164298_107039951	3300012955	Soil	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWSTGDGQLNGLAMS
Ga0164299_104052464	3300012958	Soil	MHALVVRVTIHNADRTRRVLNSQVVPRVSAAPGFKAGYWTWAAGVG
Ga0164301_103920691	3300012960	Soil	MHALVVRVTIHNDDRTREVLNSQVVPQVSGAPGFKTGYWTWTTG
Ga0164308_121858372	3300012985	Soil	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKAGYWTWATGGGE
Ga0164306_112270053	3300012988	Soil	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWSTG
Ga0164305_103176871	3300012989	Soil	MHALVVRVTIHNVDRTREALNSRVVPQVSSAPGFKTGYWTWAT
Ga0120150_10235891	3300013294	Permafrost	MHAVVVRVTIHNADRTRDVLNDQVVPQVSGASGFKAGYWTWSTSGGGTNGLSM
Ga0163162_114336641	3300013306	Switchgrass Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGGET
Ga0182006_10999592	3300015261	Rhizosphere	MYALVVRVTIHNADRTREVLNNQVVPGISGAPGFKTGYWTWLTGGGG*
Ga0132258_119203384	3300015371	Arabidopsis Rhizosphere	MHAVAVRATIHNADRTREVLNSQVVPLASGAPGFKAGYWTWPTGEGS*
Ga0132255_1008562821	3300015374	Arabidopsis Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPGVSGAPGFE
Ga0132255_1058530271	3300015374	Arabidopsis Rhizosphere	MHAVVVRVTIHNADRTREVLNSQVVPQVSGAPGFKAGYWTW
Ga0187777_113170011	3300017974	Tropical Peatland	MHALVTHVTIHNADHTREMLTSRVVPGVSSAPGFKTGYWTWQTGGDGVNG
Ga0184605_103230312	3300018027	Groundwater Sediment	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTW
Ga0184605_103300821	3300018027	Groundwater Sediment	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGAETNGLSM
Ga0187788_100331691	3300018032	Tropical Peatland	MYALVVRVTIRNADRVRGTLNSQVVPQTSSAPGFKAGYWTWPTGGGALNGLAMIIF
Ga0066667_109147453	3300018433	Grasslands Soil	MHALVVRVTIHNADHTREVLNSQVVPQVSGAPGFKTGYWTWTTGGVETN
Ga0190269_100443913	3300018465	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWT
Ga0173479_107777002	3300019362	Soil	MHALVVRAAIHNADRTREVLKSRVVPLASGAPGFKA
Ga0193730_11037052	3300020002	Soil	MHALVVRVTIHNADRTRDVLNSQVVPQVSGAPGFKTGYWTWATGGGET
Ga0247801_10403141	3300023064	Soil	MHALVVRVTIHNADRTRELLNSQVVPQVSGAPGFKTGYWTWPTGGG
Ga0207654_106470791	3300025911	Corn Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGGE
Ga0207646_100177099	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	MHALVVRVTIHNPDRTREVLNSEVVPQVSGAPGFKTG
Ga0207686_108824081	3300025934	Miscanthus Rhizosphere	MHALVVRLIIHDADRTREVLDSQVVPQVSGAPGFQTGYWT
Ga0207709_117198431	3300025935	Miscanthus Rhizosphere	MHALVVRVTIHNADRTREMLTGQVVPQASGAPGFKTGYWTWPTGDGEL
Ga0207709_118604751	3300025935	Miscanthus Rhizosphere	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGGETNGLSMV
Ga0207679_118266211	3300025945	Corn Rhizosphere	MHALVVRLIIHDADRTREVLDGQVVPQVSGAPGFQTGYWTWSSGGGELKGSR
Ga0207640_113253271	3300025981	Corn Rhizosphere	MHALVVRVTIHNADRTREVLDSQVVPQVSGAPGFKAGYWTWATGGGETNGLSMIIFD
Ga0209153_12788761	3300026312	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGG
Ga0209156_101609311	3300026547	Soil	MYAVVIRVTIHNVDRTREVLNSQVVPQVSGAPGFKTGYWTWSTGGGESNGLSM
Ga0209474_105398492	3300026550	Soil	MHALVTHVTIHNADATREALNSQVVPGISGAPGFKTGYWTWPTGSGASNGLAMLIF
Ga0209166_102183411	3300027857	Surface Soil	MHAVVVRVTIHNADRTREMLNSQVVPQVSGAPGFK
Ga0268265_123145931	3300028380	Switchgrass Rhizosphere	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFKTGYWTWSSGGELNGLS
Ga0247822_104950132	3300028592	Soil	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFK
Ga0307311_100345843	3300028716	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGGPGFKTGYW
Ga0307298_100270411	3300028717	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKT
Ga0307298_101830831	3300028717	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWT
Ga0307288_100245471	3300028778	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWMTGGGETNGLS
Ga0307282_100691933	3300028784	Soil	MHALVVRVTIHNADRTRELLNSQVVPQVSGAPGFKTG
Ga0307287_103422321	3300028796	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKAGYWTWATGGGETNG
Ga0307305_101128901	3300028807	Soil	MHALVVRVTIHNADRTRELLNSQVVPQVSGAPGFKTGY
Ga0307305_103203531	3300028807	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTG
Ga0307302_102397621	3300028814	Soil	MHALVVRVTIHNADRTREMLNSQVVPQVSGAPGFKTGYWTWPTGGAAPNG
Ga0307296_103923212	3300028819	Soil	MHALVVRVTIHNADRTREMLNSRVVPQVSGAPGFKTGYWTWPTGGAAPN
Ga0307312_101760724	3300028828	Soil	MHALIVRVIIHNADRTREMLNSQVVPQVSGAPGFKTGYWTWSTGGGEL
Ga0307308_101454392	3300028884	Soil	MHALVVRVTIHNADRTREVLNSQVVPQVSGAPGFKTGYWTWTTGGAET
Ga0318516_103058963	3300031543	Soil	MHAVVVRVTIHDADRAREVLNSQVVQLASGAPGFKAGYWTWPTV
Ga0318574_108402542	3300031680	Soil	MYALVVRVTIHNADRTREVLNNQVVPQASGAPGFKAGYWTWPTGEGELNGL
Ga0318502_106982122	3300031747	Soil	MHALVVRVTIHNMDRTREVLNSQVVPKLSGAPGFKTGYWTWST
Ga0318527_101670483	3300031859	Soil	MYALVVRVTIHNADRVRGRLNSEVVPQTSSAPGFKAGYWTWPTGGEELN
Ga0318536_106613052	3300031893	Soil	MYALVVRVTIRDADRVRGRLNSEVVPQTSSAPGFKAGYWT
Ga0318551_105416673	3300031896	Soil	MHAVVVRVTIHDADRAREVLNSQVVQLASGAPGFK
Ga0308175_1007674922	3300031938	Soil	MHAVVIRVTINNPDRTREVLNSQVVPQVSGAPGFKTGYWTWAT
Ga0306922_120646013	3300032001	Soil	MHAVVVRVTIHDADRAREVLNSQVVQLASGAPGFKAGYWTWPTVEGQLNALT
Ga0318507_104307261	3300032025	Soil	MHAVVVRVTIHDADRAREVLNSQVVQLASGAPGFKAG
Ga0310890_102877433	3300032075	Soil	MHALVVRVTIHNADRTREVLNGQVVPGISGAPGFKTGY
Ga0307471_1015563413	3300032180	Hardwood Forest Soil	MHALIVRVTIHNADTTREVLNSQVVPQASSAPGFKTGY
Ga0335082_105711793	3300032782	Soil	MHALVTHVTIHDADRTRELLNSQVVPAVSGAPGFQTGHWAWSTGD
Ga0335082_111013522	3300032782	Soil	MHALVTRVTIHNADHTREMLTSQVVPQVSGAPGFKTGYWTWQTDEGELN

Hidden Markov Model


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