Metagenome / Metatranscriptome Family F084040

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F084040
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	92 residues
Representative Sequence	MWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Number of Associated Samples	104
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	77.68 %
% of genes near scaffold ends (potentially truncated)	27.68 %
% of genes from short scaffolds (< 2000 bps)	83.04 %
Associated GOLD sequencing projects	98
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (60.714 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere (21.429 % of family members)
Environment Ontology (ENVO)	Unclassified (27.679 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (63.393 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 55.96% β-sheet: 0.00% Coil/Unstructured: 44.04%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF00196	GerE	8.04
PF13412	HTH_24	7.14
PF13581	HATPase_c_2	3.57
PF04545	Sigma70_r4	2.68
PF07883	Cupin_2	0.89
PF07992	Pyr_redox_2	0.89
PF12697	Abhydrolase_6	0.89
PF00619	CARD	0.89
PF00561	Abhydrolase_1	0.89
PF01507	PAPS_reduct	0.89
PF00589	Phage_integrase	0.89
PF03061	4HBT	0.89
PF10057	MpsC	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	61.61 %
Unclassified	root	N/A	38.39 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	60.71 %
Unclassified	root	N/A	38.39 %
Viruses	superkingdom	All Organisms → Viruses	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	60.71 %
Unclassified	root	N/A	38.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	60.71 %
Unclassified	root	N/A	38.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	60.71 %
Unclassified	root	N/A	38.39 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	11.61 %
Thermoleophilia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia	10.71 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	11.61 %
Solirubrobacterales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	9.82 %
Thermoleophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.61 %
Conexibacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae	1.79 %
Thermoleophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae	0.89 %
Solirubrobacteraceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.61 %
Conexibacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter	1.79 %
unclassified Thermoleophilaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae	0.89 %
Solirubrobacter	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.61 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.79 %
unclassified Solirubrobacter	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter	0.89 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	38.39 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	11.61 %
Conexibacter woesei	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	1.79 %
Solirubrobacter sp. URHD0082	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	0.89 %
Thermoleophilaceae bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	0.89 %
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000955\|JGI1027J12803_105899198	Not Available	1058	Open in IMG/M
3300000956\|JGI10216J12902_103681374	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1453	Open in IMG/M
3300001305\|C688J14111_10308640	Not Available	502	Open in IMG/M
3300004081\|Ga0063454_100513369	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	847	Open in IMG/M
3300004479\|Ga0062595_101003651	Not Available	717	Open in IMG/M
3300004479\|Ga0062595_102449575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	519	Open in IMG/M
3300005328\|Ga0070676_10983725	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	632	Open in IMG/M
3300005329\|Ga0070683_100004035	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	12018	Open in IMG/M
3300005338\|Ga0068868_100182109	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1743	Open in IMG/M
3300005340\|Ga0070689_100056786	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3036	Open in IMG/M
3300005344\|Ga0070661_100321999	Not Available	1208	Open in IMG/M
3300005347\|Ga0070668_100141553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1939	Open in IMG/M
3300005353\|Ga0070669_101815656	Not Available	532	Open in IMG/M
3300005365\|Ga0070688_101047790	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Conexibacteraceae → Conexibacter → Conexibacter woesei	650	Open in IMG/M
3300005406\|Ga0070703_10339630	Not Available	638	Open in IMG/M
3300005435\|Ga0070714_100944233	Not Available	838	Open in IMG/M
3300005437\|Ga0070710_10483508	Not Available	845	Open in IMG/M
3300005466\|Ga0070685_10051100	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	2390	Open in IMG/M
3300005530\|Ga0070679_100397574	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1324	Open in IMG/M
3300005543\|Ga0070672_100478343	Not Available	1075	Open in IMG/M
3300005547\|Ga0070693_100389434	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	963	Open in IMG/M
3300005549\|Ga0070704_100512693	Not Available	1043	Open in IMG/M
3300005564\|Ga0070664_100049347	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	3559	Open in IMG/M
3300005578\|Ga0068854_100417477	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1114	Open in IMG/M
3300006046\|Ga0066652_100097702	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	2361	Open in IMG/M
3300006058\|Ga0075432_10092455	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1109	Open in IMG/M
3300006791\|Ga0066653_10074205	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1481	Open in IMG/M
3300006844\|Ga0075428_100887333	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	946	Open in IMG/M
3300006844\|Ga0075428_101112457	Not Available	834	Open in IMG/M
3300006845\|Ga0075421_100813613	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales	1074	Open in IMG/M
3300006847\|Ga0075431_100201101	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2038	Open in IMG/M
3300006854\|Ga0075425_100150124	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2669	Open in IMG/M
3300006854\|Ga0075425_100885357	All Organisms → Viruses → Predicted Viral	1021	Open in IMG/M
3300006871\|Ga0075434_100601519	Not Available	1119	Open in IMG/M
3300006903\|Ga0075426_11510042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	511	Open in IMG/M
3300006904\|Ga0075424_100296254	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1722	Open in IMG/M
3300006914\|Ga0075436_101369327	Not Available	536	Open in IMG/M
3300006969\|Ga0075419_10136340	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1598	Open in IMG/M
3300009094\|Ga0111539_11267348	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	856	Open in IMG/M
3300009094\|Ga0111539_12202776	Not Available	639	Open in IMG/M
3300009098\|Ga0105245_10036597	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4361	Open in IMG/M
3300009100\|Ga0075418_11617484	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	704	Open in IMG/M
3300009137\|Ga0066709_100652042	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1507	Open in IMG/M
3300009147\|Ga0114129_10113849	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3730	Open in IMG/M
3300009148\|Ga0105243_10056528	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3121	Open in IMG/M
3300009156\|Ga0111538_10689451	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1294	Open in IMG/M
3300009162\|Ga0075423_10927701	Not Available	923	Open in IMG/M
3300009162\|Ga0075423_13065928	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	512	Open in IMG/M
3300009174\|Ga0105241_10206118	Not Available	1645	Open in IMG/M
3300010040\|Ga0126308_10400908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	915	Open in IMG/M
3300010041\|Ga0126312_10024286	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082	4044	Open in IMG/M
3300010044\|Ga0126310_10831279	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	713	Open in IMG/M
3300010301\|Ga0134070_10193560	Not Available	743	Open in IMG/M
3300010322\|Ga0134084_10210284	Not Available	685	Open in IMG/M
3300010325\|Ga0134064_10101945	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	946	Open in IMG/M
3300010326\|Ga0134065_10099553	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	964	Open in IMG/M
3300010333\|Ga0134080_10046529	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1697	Open in IMG/M
3300010337\|Ga0134062_10297334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	764	Open in IMG/M
3300010364\|Ga0134066_10026497	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1334	Open in IMG/M
3300010373\|Ga0134128_10042877	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Thermoleophilales → Thermoleophilaceae → unclassified Thermoleophilaceae → Thermoleophilaceae bacterium	5266	Open in IMG/M
3300010396\|Ga0134126_10087823	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3837	Open in IMG/M
3300010399\|Ga0134127_10038734	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	3869	Open in IMG/M
3300011119\|Ga0105246_10014589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	4944	Open in IMG/M
3300012204\|Ga0137374_10592334	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	847	Open in IMG/M
3300012208\|Ga0137376_10843111	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	788	Open in IMG/M
3300012362\|Ga0137361_11819639	Not Available	527	Open in IMG/M
3300012376\|Ga0134032_1080837	Not Available	536	Open in IMG/M
3300012407\|Ga0134050_1045877	Not Available	507	Open in IMG/M
3300012469\|Ga0150984_105502570	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	620	Open in IMG/M
3300012915\|Ga0157302_10135569	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	820	Open in IMG/M
3300012955\|Ga0164298_10151440	Not Available	1303	Open in IMG/M
3300012975\|Ga0134110_10141246	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	991	Open in IMG/M
3300012976\|Ga0134076_10377781	Not Available	628	Open in IMG/M
3300012977\|Ga0134087_10095045	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1241	Open in IMG/M
3300012984\|Ga0164309_10310994	Not Available	1140	Open in IMG/M
3300012985\|Ga0164308_10194249	Not Available	1541	Open in IMG/M
3300013297\|Ga0157378_10717876	Not Available	1020	Open in IMG/M
3300014157\|Ga0134078_10216076	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	789	Open in IMG/M
3300015077\|Ga0173483_10514696	Not Available	641	Open in IMG/M
3300015357\|Ga0134072_10284414	Not Available	610	Open in IMG/M
3300015358\|Ga0134089_10245346	Not Available	731	Open in IMG/M
3300015358\|Ga0134089_10510072	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	528	Open in IMG/M
3300015371\|Ga0132258_10138151	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5825	Open in IMG/M
3300015373\|Ga0132257_101752948	Not Available	797	Open in IMG/M
3300017792\|Ga0163161_10711064	Not Available	837	Open in IMG/M
3300018433\|Ga0066667_10344666	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1181	Open in IMG/M
3300018482\|Ga0066669_10171852	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1623	Open in IMG/M
3300020070\|Ga0206356_11662374	Not Available	597	Open in IMG/M
3300022756\|Ga0222622_10606243	Not Available	791	Open in IMG/M
3300025901\|Ga0207688_10010214	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	5111	Open in IMG/M
3300025906\|Ga0207699_10364584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1022	Open in IMG/M
3300025917\|Ga0207660_10255220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1385	Open in IMG/M
3300025923\|Ga0207681_10428667	Not Available	1073	Open in IMG/M
3300025926\|Ga0207659_10268514	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1391	Open in IMG/M
3300025931\|Ga0207644_11213242	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	634	Open in IMG/M
3300025933\|Ga0207706_10024775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	5377	Open in IMG/M
3300025937\|Ga0207669_10144015	Not Available	1659	Open in IMG/M
3300025938\|Ga0207704_11665609	Not Available	548	Open in IMG/M
3300025939\|Ga0207665_10196077	Not Available	1469	Open in IMG/M
3300025981\|Ga0207640_10128225	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1829	Open in IMG/M
3300026041\|Ga0207639_10510371	Not Available	1100	Open in IMG/M
3300026075\|Ga0207708_10002213	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	14372	Open in IMG/M
3300026089\|Ga0207648_12086264	Not Available	528	Open in IMG/M
3300027880\|Ga0209481_10425485	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	682	Open in IMG/M
3300027907\|Ga0207428_10755575	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	693	Open in IMG/M
3300027907\|Ga0207428_10938812	Not Available	610	Open in IMG/M
3300027909\|Ga0209382_10378944	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1579	Open in IMG/M
3300027909\|Ga0209382_10382534	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1570	Open in IMG/M
3300028380\|Ga0268265_11605519	Not Available	655	Open in IMG/M
3300028381\|Ga0268264_11114682	Not Available	798	Open in IMG/M
3300028828\|Ga0307312_10515528	Not Available	789	Open in IMG/M
3300030336\|Ga0247826_11303921	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	585	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	52.68%
Host-Associated	Host-Associated	47.32%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	51.79%
Plants	Host-Associated → Plants	47.32%
Aquatic	Environmental → Aquatic	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	51.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	36.61%
Rhizoplane	Host-Associated → Plants → Rhizoplane	10.71%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	37.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	25.89%
Loam	Environmental → Terrestrial → Soil → Loam	14.29%
Soil	Host-Associated → Plants → Rhizosphere → Soil	10.71%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	8.93%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	28.57%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	25.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	12.50%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	10.71%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	8.93%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	6.25%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Unclassified	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%

Habitat	Taxonomy	Distribution
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	21.43%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.29%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	5.36%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.57%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere	3.57%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere	3.57%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.68%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	2.68%
Serpentine Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Corn Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere	2.68%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	2.68%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000955	Soil microbial communities from Great Prairies - Iowa, Native Prairie soil	Environmental	Open in IMG/M
3300000956	Soil microbial communities from Great Prairies - Kansas, Native Prairie soil	Environmental	Open in IMG/M
3300001305	Grasslands soil microbial communities from Hopland, California, USA	Environmental	Open in IMG/M
3300004081	Grasslands soil microbial communities from Hopland, California, USA - 2 (version 2)	Environmental	Open in IMG/M
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005328	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG	Host-Associated	Open in IMG/M
3300005329	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG	Environmental	Open in IMG/M
3300005338	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2	Host-Associated	Open in IMG/M
3300005340	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG	Environmental	Open in IMG/M
3300005344	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaG	Host-Associated	Open in IMG/M
3300005347	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG	Host-Associated	Open in IMG/M
3300005353	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG	Host-Associated	Open in IMG/M
3300005365	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3H metaG	Environmental	Open in IMG/M
3300005406	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005530	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG	Environmental	Open in IMG/M
3300005543	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG	Host-Associated	Open in IMG/M
3300005547	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaG	Environmental	Open in IMG/M
3300005549	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005578	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2	Host-Associated	Open in IMG/M
3300006046	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101	Environmental	Open in IMG/M
3300006058	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1	Host-Associated	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006844	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2	Host-Associated	Open in IMG/M
3300006845	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5	Host-Associated	Open in IMG/M
3300006847	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD5	Host-Associated	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006871	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006904	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3	Host-Associated	Open in IMG/M
3300006914	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5	Host-Associated	Open in IMG/M
3300006969	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3	Host-Associated	Open in IMG/M
3300009094	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)	Host-Associated	Open in IMG/M
3300009098	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG	Host-Associated	Open in IMG/M
3300009100	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD2	Host-Associated	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009148	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-4 metaG	Host-Associated	Open in IMG/M
3300009156	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)	Host-Associated	Open in IMG/M
3300009162	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2	Host-Associated	Open in IMG/M
3300009174	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG	Host-Associated	Open in IMG/M
3300010040	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55	Environmental	Open in IMG/M
3300010041	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104A	Environmental	Open in IMG/M
3300010044	Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot60	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010325	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_0_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010333	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010364	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300010399	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3	Environmental	Open in IMG/M
3300011119	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaG	Host-Associated	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012407	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012915	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S103-311B-2	Environmental	Open in IMG/M
3300012955	Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_216_MG	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300012976	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaG	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300012984	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_247_MG	Environmental	Open in IMG/M
3300012985	Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_246_MG	Environmental	Open in IMG/M
3300013297	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG	Host-Associated	Open in IMG/M
3300014157	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300015077	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S178-409R-2 (version 2)	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015358	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015371	Combined assembly of cpr5 and col0 rhizosphere and soil	Host-Associated	Open in IMG/M
3300015373	Combined assembly of cpr5 rhizosphere	Host-Associated	Open in IMG/M
3300017792	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4-5 metaG	Host-Associated	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300020070	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022756	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5_b1	Environmental	Open in IMG/M
3300025901	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4 (SPAdes)	Host-Associated	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025917	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)	Environmental	Open in IMG/M
3300025923	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025926	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M4-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025931	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025933	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025937	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300025938	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes)	Host-Associated	Open in IMG/M
3300025939	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025981	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026041	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026075	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300026089	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300027880	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD3 (SPAdes)	Host-Associated	Open in IMG/M
3300027907	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (SPAdes)	Host-Associated	Open in IMG/M
3300027909	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)	Host-Associated	Open in IMG/M
3300028380	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028381	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 (SPAdes)	Host-Associated	Open in IMG/M
3300028828	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_202	Environmental	Open in IMG/M
3300030336	Soil microbial communities from agricultural site in Penn Yan, New York, United States - 12C_Control_Day1	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI1027J12803_1058991981	3300000955	Soil	MHGRTGAAAIESSSPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPEQIARDLSQDARRRGL*
JGI10216J12902_1036813743	3300000956	Soil	VWRRRSSGAALETAAAEVDGDRRLKTVEARIEHLEAALEGLQDALYRHEVLDEESIGELRRRTDPEQMARDLSDDARRRGL*
C688J14111_103086402	3300001305	Soil	VRRLWRRRSSGAGVEPPAAGVGWEQRFETCEARIEHLETALEGLQDALYRHEILDKESLAELRRRTDPDQIARDLSEDARRRGL*
Ga0063454_1005133691	3300004081	Soil	RLWRRRSSGAGVEPPAAGVGWEQRFETCEARIEHLETALEGLQDALYRHEILDKESLAELRRRTDPDQIARDLSEDARRRGL*
Ga0062595_1010036511	3300004479	Soil	MTERVTRRWRRRTSRAGTEPLVAEVGWEQRFERCEARTEHLETMLEGLQDALYRHEILDNENIADLRRRTDPEQMARDLSQDARKRRL*
Ga0062595_1024495751	3300004479	Soil	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSRAAFETAVVEADGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0070676_109837251	3300005328	Miscanthus Rhizosphere	MAARRTGQQVPTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070683_1000040355	3300005329	Corn Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0068868_1001821095	3300005338	Miscanthus Rhizosphere	HVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070689_1000567861	3300005340	Switchgrass Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070661_1003219992	3300005344	Corn Rhizosphere	MWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070668_1001415534	3300005347	Switchgrass Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070669_1018156562	3300005353	Switchgrass Rhizosphere	EGCEDSAMAARRTDQHVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070688_1010477901	3300005365	Switchgrass Rhizosphere	MWRRRSGGAALETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARA
Ga0070703_103396303	3300005406	Corn, Switchgrass And Miscanthus Rhizosphere	DPRVAAVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070714_1009442331	3300005435	Agricultural Soil	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070710_104835083	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASPETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070685_100511003	3300005466	Switchgrass Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070679_1003975744	3300005530	Corn Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQNALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070672_1004783431	3300005543	Miscanthus Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070693_1003894343	3300005547	Corn, Switchgrass And Miscanthus Rhizosphere	ETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0070704_1005126933	3300005549	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDP
Ga0070664_1000493479	3300005564	Corn Rhizosphere	MAARQTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0068854_1004174771	3300005578	Corn Rhizosphere	RSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0066652_1000977022	3300006046	Soil	MHGRIGAAAIESSSPDVGWGRRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPGQIARDLSQDARRRGL*
Ga0075432_100924551	3300006058	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSRAAFETAVVEADGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQIARDLSDDARRRGL*
Ga0066653_100742051	3300006791	Soil	PDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPERIARDLSQDARRRGL*
Ga0075428_1008873333	3300006844	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSKAAFETAVVEVDWDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0075428_1011124571	3300006844	Populus Rhizosphere	RTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075421_1008136133	3300006845	Populus Rhizosphere	MAAQRTGQRAPSSRSVDPRVADRVGQVSGRPSSGAASETAAAAVDGDRRFEALEARIEHLETALEGLQDALYRHEVLDEESIGELRRRTDPQQMARDLSDDARRRGL*
Ga0075431_1002011014	3300006847	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSKAAFETAVVEGDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0075425_1001501244	3300006854	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVLRLRHSRAAFETAVAEEVDGDRRFKALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0075425_1008853571	3300006854	Populus Rhizosphere	ARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075434_1006015193	3300006871	Populus Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075426_115100421	3300006903	Populus Rhizosphere	LPLARYLPEGCEDSAMAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAEAGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075424_1002962543	3300006904	Populus Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAEAGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075436_1013693272	3300006914	Populus Rhizosphere	TSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075419_101363403	3300006969	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSRAAFETAVVEVDWDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0111539_112673481	3300009094	Populus Rhizosphere	VWRRRSSRAAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0111539_122027762	3300009094	Populus Rhizosphere	MWRRRSGGAAVETASAETGGDPRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQM
Ga0105245_100365972	3300009098	Miscanthus Rhizosphere	MWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075418_116174841	3300009100	Populus Rhizosphere	AAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDTEQMARDLSADARRRGL*
Ga0066709_1006520423	3300009137	Grasslands Soil	MHGRIGAAAIESSSPDVGWEQRLERVEARIEHLETALEGLQDALYRHEVLDEENISKLHRRMDPEQIARDLSQDARRRGL*
Ga0114129_101138492	3300009147	Populus Rhizosphere	VWRRRSSRAAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQIARDLSDDARRRGL*
Ga0105243_100565281	3300009148	Miscanthus Rhizosphere	MWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0111538_106894513	3300009156	Populus Rhizosphere	VWRRRSSKAAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQIARDLSDDARRRGL*
Ga0075423_109277012	3300009162	Populus Rhizosphere	MWRRRSGGAAVETASAEAGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0075423_130659281	3300009162	Populus Rhizosphere	VWRRRSSKAAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0105241_102061183	3300009174	Corn Rhizosphere	MWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRTRTDPEQMARALSDDARRRGL*
Ga0126308_104009081	3300010040	Serpentine Soil	MHGRIGAAAIESSSPDVGWEQRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPERIARELSQDARRRGL*
Ga0126312_100242863	3300010041	Serpentine Soil	MHGRIGAAAIESSSPDVGWERRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPERIARDLSQDARRRGL*
Ga0126310_108312791	3300010044	Serpentine Soil	VATIAERVSRLWRRRSSEAAIEPPVADVGWEQRFEAFEARIEHLETALEGVQDALYRHEILDKETIAELRRRTDPEQMARDLSQDARRRGL*
Ga0134070_101935601	3300010301	Grasslands Soil	MHGRIGAAAIESSSPDVGWGRRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPEQIARDVSQDARRRGL*
Ga0134084_102102841	3300010322	Grasslands Soil	MHGRIGAAAIESSSPDVGWGRRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPERIARDLSQDARRRGL*
Ga0134064_101019453	3300010325	Grasslands Soil	MHGRIGAAAIESSSPDVGWEQRLERVEARIEHLETALEGLQDALYRHEVLDEEHISELHRRMDPGQIARNLSQDARRRGL*
Ga0134065_100995532	3300010326	Grasslands Soil	LHGRIGAAAIESSSPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDEENIGELHRRMDPEQIARDLSQDARRRGL*
Ga0134080_100465291	3300010333	Grasslands Soil	MHGRIGAAAIESSSPDVGCEHRLERVEARIEHLETALEGLQDALYRHEVLDKDNISELHRRMDPGQIARNLSQDARRRGL*
Ga0134062_102973342	3300010337	Grasslands Soil	VSRLTHGQIGAGAIESASPDVGWEQRLERVEARIEHLETALEGLQDALYRHEVLDEENISESHRRMDPEQIARDLSQDARRRGL*
Ga0134066_100264973	3300010364	Grasslands Soil	MHGRSSAAAIESSSPDVGWEHRLARVEARVEHLETALEGLQDALYRHEVLDEENISELYRRMDPEQIARDLSQDARRRGL*
Ga0134128_100428775	3300010373	Terrestrial Soil	MWRRRSRGAAVETASAETGGDRLLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0134126_100878234	3300010396	Terrestrial Soil	MWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0134127_100387349	3300010399	Terrestrial Soil	MWRRRSRGAAVETASAETGGDRRLEALEAQIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0105246_100145892	3300011119	Miscanthus Rhizosphere	MWRRRSGGAAVETASPETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0137374_105923342	3300012204	Vadose Zone Soil	MHGRSGPAAIESWSPEVGWENRLERVEARIEHLETALEGLRDALFRHEVLDKEHIGELHRRMDPEQIARDLSRDARRRGL*
Ga0137376_108431112	3300012208	Vadose Zone Soil	MHGRGGAAAIESSSPDVGWERRLERVEARIEHLETALEGLQDALYRHEVLDKENIGELHRRMDPEQIARVLSQDARSRGL*
Ga0137361_118196391	3300012362	Vadose Zone Soil	MHGRGGAAAIESSSPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDEDNISELQRRMDPERIARDLSQDARRRGL*
Ga0134032_10808371	3300012376	Grasslands Soil	MHGRIGAAAIESSSPDVGWGRRLERVEARIEHLETALEGLQDALYRHEVLDKDNISELHRRMDPERIARDLSQDARRRGL*
Ga0134050_10458771	3300012407	Grasslands Soil	MHGRSGAAAIESSPPDVGWEHRLERVEARIEHLETALEGLQDALYRQVLDEENISELHRRMDPEQIARDLSQDARRRGL*
Ga0150984_1055025702	3300012469	Avena Fatua Rhizosphere	VRRLWRRRSSGAGVEPPAAGVGWEQRFETCEARIEHLETVLEGLQDALYRHEILDKESLAELRRRTDPDQIARDLSEDARRRGL*
Ga0157302_101355691	3300012915	Soil	AQRTGQQAPSSRSADPRVTAIAEQVSRVWRRRSSGAALETAAAEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL*
Ga0164298_101514403	3300012955	Soil	MWRRRSRGAAVETASAETGGDRRLEALEARMGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL*
Ga0134110_101412461	3300012975	Grasslands Soil	MHGRIGAAAIESSSPDVGWERRLERVEARIEHLETALEGLQDALYRHEVLDEENIGELHRRMDPERIARDLSQDARRRGL*
Ga0134076_103777811	3300012976	Grasslands Soil	MHGRIGAAAIESSSRDVGWERRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPGQIARNLSQDARRRGL*
Ga0134087_100950453	3300012977	Grasslands Soil	MHGRSSAAAIESSSPDVGWEQRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPERIARDLSQDARRRGL*
Ga0164309_103109942	3300012984	Soil	MWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGV*
Ga0164308_101942492	3300012985	Soil	MWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGDLRRRTDPEQMARALSDDARRRGL*
Ga0157378_107178763	3300013297	Miscanthus Rhizosphere	MWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDP
Ga0134078_102160763	3300014157	Grasslands Soil	MHGRIGAAAIESSSPDVGWGHRLETGEARIKHLEMALEGLQDALCRHEVLDEENISELHRRMDPERIARDLSQDARRRGL*
Ga0173483_105146961	3300015077	Soil	VWPRRSSRAAFETAVVEVDGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARD
Ga0134072_102844141	3300015357	Grasslands Soil	LHGRIGAAAIESSSPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDKDNISELHRRMDPGQIARNLSQDARRRGL*
Ga0134089_102453461	3300015358	Grasslands Soil	MHGRIGAAAIDSSSPDVGWEQRLERVEARIEHLETALEGLQDAAYRQAVLQDENIDELRARTEPEQLARDLSQDARQRGL*
Ga0134089_105100722	3300015358	Grasslands Soil	IESSSPDVGLEHRLERVEARIEHLETALEGLQDALYRHEVLNEETISELQRRMDPEQIARDLSQDARRRGL*
Ga0132258_101381513	3300015371	Arabidopsis Rhizosphere	VWRRPSSGAAFETAVVKADGDRRFEALEARIEHLEAALEGLQDALYRHEVLDEESVGELRRRTDPEQMARDLSDDARRRGL*
Ga0132257_1017529481	3300015373	Arabidopsis Rhizosphere	MAAQGTGQQAPSSRSVDPRVAAIAERASRVWRRPSSGAAFETAVVKADGDRRFEALEARIGHLETALEGLQDALYRHEVSDKESMGELRRRTDPEQMARALSDDARRRGL*
Ga0163161_107110641	3300017792	Switchgrass Rhizosphere	MAARRTDQHVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASAEVGADRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0066667_103446662	3300018433	Grasslands Soil	MHGRIGAAAIESSSPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDKDNISELHRRMDPGQIARNLSQDARRRGL
Ga0066669_101718523	3300018482	Grasslands Soil	MHGRSGAAAIESSPPDVGWEHRLERVEARIEHLETALEGLQDALYRHEVLDEENISELHRRMDPEQIARDLSQDARRRGL
Ga0206356_116623742	3300020070	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL
Ga0222622_106062431	3300022756	Groundwater Sediment	MAAQRTGQQAPGLRSVDPRVAAVAERVSRVWRRRSSGAAFETAVAEVDGDRRFEALEARIEHLETALEGLQDARYRHEVSDRESIGELRRRTDPEQMARDLSDDARRRGL
Ga0207688_100102148	3300025901	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRTDQHVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207699_103645842	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207660_102552202	3300025917	Corn Rhizosphere	MAARRTGQQVPTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207681_104286672	3300025923	Switchgrass Rhizosphere	MAARRTDQHVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207659_102685145	3300025926	Miscanthus Rhizosphere	VTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207644_112132422	3300025931	Switchgrass Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207706_100247754	3300025933	Corn Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207669_101440155	3300025937	Miscanthus Rhizosphere	ERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207704_116656092	3300025938	Miscanthus Rhizosphere	AMAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207665_101960772	3300025939	Corn, Switchgrass And Miscanthus Rhizosphere	MWRRRSGGAAVETASPETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207640_101282251	3300025981	Corn Rhizosphere	MAARRTGQQVPTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207639_105103711	3300026041	Corn Rhizosphere	MAARRTDQQVTTSRSKDPRVAAVAERVSRMWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARR
Ga0207708_1000221314	3300026075	Corn, Switchgrass And Miscanthus Rhizosphere	MWRRRSRGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARALSDDARRRGL
Ga0207648_120862642	3300026089	Miscanthus Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRQAILADEKISDLRKRTAPEQLARDLSDDARRRGL
Ga0209481_104254851	3300027880	Populus Rhizosphere	TAVVEVDWDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL
Ga0207428_107555752	3300027907	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSRAAFETAVVEADGDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQIARDLSDDARRRGL
Ga0207428_109388121	3300027907	Populus Rhizosphere	TGPTFETPAADVDRDGRLKTVEARLEYLETALEGLQDALYRHQVLDEENLGELRRRTDPEQIARALSDDARRRGL
Ga0209382_103789442	3300027909	Populus Rhizosphere	MAAQRTGQQAPSSRSVDPRVAAIADQVSRVWRRRSSKAAFETAVVEVDWDRRFEALEDRIEHLETALEGLQDALYRHEVLDEQSIGELRRRTDPEQMARDLSDDARRRGL
Ga0209382_103825343	3300027909	Populus Rhizosphere	MAAQRTGQRAPSSRSVDPRVADRVGQVSGRPSSGAASETAAAAVDGDRRFEALEARIEHLETALEGLQDALYRHEVLDEESIGELRRRTDPQQMARDLSDDARRRGL
Ga0268265_116055191	3300028380	Switchgrass Rhizosphere	MAARRTGQQVPTSRSKDPRVATVAERVSRMWRRRSGGAAVETASAETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEAMAGSRSPRWRPSSASPGP
Ga0268264_111146823	3300028381	Switchgrass Rhizosphere	AAVAERVSRMWRRRSGGAAVETASPETGGDRRLEALEARIGHLETALEGLQDALYRHEVADKESIGELRRRTDPEQMARALSDDARRRGL
Ga0307312_105155282	3300028828	Soil	MAARRTGQQVPTSRSKDPRVATVAERVSRVWRRRSGGAAVETASAEVGGDRRLEALEVRIAHLETALEGLQDALYRHEVSDKESIGELRRRTDPEQMARAL
Ga0247826_113039213	3300030336	Soil	VAERVGRVSGRPSSGAASETAAAAVDGDRRFEALEARIEHLETALEGLQDALYRHEVLDEESIGELRRRTDPQQMARDLSDDARRRGL

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F084040

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences