Metagenome Family F084024

Basic Information
Family ID	F084024
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	41 residues
Representative Sequence	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDA
Number of Associated Samples	89
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	65.18 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	83.93 %
Associated GOLD sequencing projects	87
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.51

Most Common Taxonomy
Group	Bacteria (99.107 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (27.679 % of family members)
Environment Ontology (ENVO)	Unclassified (45.536 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (52.679 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 44.29% β-sheet: 0.00% Coil/Unstructured: 55.71%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF09180	ProRS-C_1	57.14
PF08241	Methyltransf_11	8.04
PF00589	Phage_integrase	5.36
PF13505	OMP_b-brl	3.57
PF13620	CarboxypepD_reg	1.79
PF03129	HGTP_anticodon	1.79
PF13393	tRNA-synt_His	1.79
PF01435	Peptidase_M48	0.89
PF03928	HbpS-like	0.89
PF01039	Carboxyl_trans	0.89
PF01098	FTSW_RODA_SPOVE	0.89
PF06723	MreB_Mbl	0.89
PF13649	Methyltransf_25	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0442	Prolyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	58.93
COG0124	Histidyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.79
COG0423	Glycyl-tRNA synthetase, class II	Translation, ribosomal structure and biogenesis [J]	1.79
COG0441	Threonyl-tRNA synthetase	Translation, ribosomal structure and biogenesis [J]	1.79
COG0772	Peptodoglycan polymerase FtsW/RodA/SpoVE	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG0777	Acetyl-CoA carboxylase beta subunit	Lipid transport and metabolism [I]	0.89
COG0825	Acetyl-CoA carboxylase alpha subunit	Lipid transport and metabolism [I]	0.89
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.89
COG4799	Acetyl-CoA carboxylase, carboxyltransferase component	Lipid transport and metabolism [I]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	99.11 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	61.61 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	0.89 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	61.61 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Gemmatimonadetes	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes	41.96 %
Gemmatimonadetes	class	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes	9.82 %
candidate division TA06	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06	0.89 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.96 %
Gemmatimonadales	order	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales	9.82 %
Verrucomicrobia bacterium ADurb.Bin474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	0.89 %
candidate division TA06 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.96 %
Gemmatimonadaceae	family	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	9.82 %
Verrucomicrobia bacterium ADurb.Bin474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	0.89 %
candidate division TA06 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.96 %
Gemmatirosa	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa	7.14 %
Gemmatimonas	genus	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas	0.89 %
Verrucomicrobia bacterium ADurb.Bin474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	0.89 %
candidate division TA06 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.96 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7.14 %
unclassified Gemmatimonas	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas	0.89 %
Verrucomicrobia bacterium ADurb.Bin474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	0.89 %
candidate division TA06 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	0.89 %
Unclassified	root	N/A	0.89 %

Name	Rank	Taxonomy	Distribution
Gemmatimonadetes bacterium	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	41.96 %
Gemmatirosa kalamazoonesis	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	7.14 %
Gemmatimonas sp.	species	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	0.89 %
Verrucomicrobia bacterium ADurb.Bin474	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	0.89 %
candidate division TA06 bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	0.89 %
Unclassified	root	N/A	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300004479\|Ga0062595_100422243	All Organisms → cellular organisms → Bacteria	966	Open in IMG/M
3300005171\|Ga0066677_10653371	All Organisms → cellular organisms → Bacteria	592	Open in IMG/M
3300005187\|Ga0066675_10059444	All Organisms → cellular organisms → Bacteria	2388	Open in IMG/M
3300005446\|Ga0066686_10769687	All Organisms → cellular organisms → Bacteria	643	Open in IMG/M
3300005446\|Ga0066686_10858295	All Organisms → cellular organisms → Bacteria	599	Open in IMG/M
3300005446\|Ga0066686_10987159	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	548	Open in IMG/M
3300005447\|Ga0066689_10085271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1781	Open in IMG/M
3300005540\|Ga0066697_10021383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3507	Open in IMG/M
3300005540\|Ga0066697_10260638	All Organisms → cellular organisms → Bacteria	1026	Open in IMG/M
3300005546\|Ga0070696_100368494	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1116	Open in IMG/M
3300005552\|Ga0066701_10478568	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	773	Open in IMG/M
3300005556\|Ga0066707_10699271	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatimonas → unclassified Gemmatimonas → Gemmatimonas sp.	636	Open in IMG/M
3300005556\|Ga0066707_10825961	All Organisms → cellular organisms → Bacteria	571	Open in IMG/M
3300005557\|Ga0066704_10164639	All Organisms → cellular organisms → Bacteria	1491	Open in IMG/M
3300005557\|Ga0066704_10175844	All Organisms → cellular organisms → Bacteria	1442	Open in IMG/M
3300005557\|Ga0066704_10290530	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1106	Open in IMG/M
3300005557\|Ga0066704_10874392	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	556	Open in IMG/M
3300005561\|Ga0066699_10180685	All Organisms → cellular organisms → Bacteria	1459	Open in IMG/M
3300005561\|Ga0066699_10293295	All Organisms → cellular organisms → Bacteria	1157	Open in IMG/M
3300005576\|Ga0066708_10775274	All Organisms → cellular organisms → Bacteria	603	Open in IMG/M
3300006031\|Ga0066651_10390506	All Organisms → cellular organisms → Bacteria	743	Open in IMG/M
3300006034\|Ga0066656_10429765	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	857	Open in IMG/M
3300006791\|Ga0066653_10674794	All Organisms → cellular organisms → Bacteria	531	Open in IMG/M
3300006797\|Ga0066659_11415032	All Organisms → cellular organisms → Bacteria	581	Open in IMG/M
3300006854\|Ga0075425_102755657	All Organisms → cellular organisms → Bacteria	541	Open in IMG/M
3300006903\|Ga0075426_11493773	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	514	Open in IMG/M
3300006954\|Ga0079219_10628337	All Organisms → cellular organisms → Bacteria	795	Open in IMG/M
3300007004\|Ga0079218_10393284	All Organisms → cellular organisms → Bacteria	1177	Open in IMG/M
3300007255\|Ga0099791_10184947	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	980	Open in IMG/M
3300007258\|Ga0099793_10244026	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	866	Open in IMG/M
3300007258\|Ga0099793_10629110	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	539	Open in IMG/M
3300009012\|Ga0066710_101894161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	893	Open in IMG/M
3300009038\|Ga0099829_10021618	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4430	Open in IMG/M
3300009088\|Ga0099830_10227264	All Organisms → cellular organisms → Bacteria	1470	Open in IMG/M
3300009088\|Ga0099830_10403758	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1105	Open in IMG/M
3300009089\|Ga0099828_11715091	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	552	Open in IMG/M
3300009137\|Ga0066709_100758170	All Organisms → cellular organisms → Bacteria	1402	Open in IMG/M
3300009137\|Ga0066709_103373742	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	580	Open in IMG/M
3300009147\|Ga0114129_11080867	All Organisms → cellular organisms → Bacteria	1005	Open in IMG/M
3300009553\|Ga0105249_13044563	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	538	Open in IMG/M
3300009821\|Ga0105064_1040755	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	883	Open in IMG/M
3300010301\|Ga0134070_10068313	All Organisms → cellular organisms → Bacteria	1211	Open in IMG/M
3300010321\|Ga0134067_10201481	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	731	Open in IMG/M
3300010322\|Ga0134084_10082879	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	999	Open in IMG/M
3300010323\|Ga0134086_10507054	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300010326\|Ga0134065_10010286	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	2481	Open in IMG/M
3300010329\|Ga0134111_10116230	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1037	Open in IMG/M
3300010337\|Ga0134062_10230619	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	854	Open in IMG/M
3300011271\|Ga0137393_11172076	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	652	Open in IMG/M
3300012096\|Ga0137389_10654021	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	903	Open in IMG/M
3300012198\|Ga0137364_10111151	All Organisms → cellular organisms → Bacteria	1942	Open in IMG/M
3300012198\|Ga0137364_10623904	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	813	Open in IMG/M
3300012206\|Ga0137380_10288100	All Organisms → cellular organisms → Bacteria	1473	Open in IMG/M
3300012207\|Ga0137381_11111870	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	680	Open in IMG/M
3300012208\|Ga0137376_10055198	All Organisms → cellular organisms → Bacteria	3262	Open in IMG/M
3300012208\|Ga0137376_11112311	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → candidate division TA06 → candidate division TA06 bacterium	676	Open in IMG/M
3300012208\|Ga0137376_11181044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	654	Open in IMG/M
3300012209\|Ga0137379_10463044	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1176	Open in IMG/M
3300012209\|Ga0137379_11219091	All Organisms → cellular organisms → Bacteria	659	Open in IMG/M
3300012210\|Ga0137378_10314359	All Organisms → cellular organisms → Bacteria	1457	Open in IMG/M
3300012211\|Ga0137377_10096584	Not Available	2795	Open in IMG/M
3300012285\|Ga0137370_10626720	All Organisms → cellular organisms → Bacteria	666	Open in IMG/M
3300012354\|Ga0137366_10135134	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1859	Open in IMG/M
3300012357\|Ga0137384_10046298	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3594	Open in IMG/M
3300012357\|Ga0137384_10984578	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	678	Open in IMG/M
3300012359\|Ga0137385_10005161	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	11449	Open in IMG/M
3300012359\|Ga0137385_10467267	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1070	Open in IMG/M
3300012918\|Ga0137396_10368383	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1064	Open in IMG/M
3300012922\|Ga0137394_10848863	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	764	Open in IMG/M
3300012929\|Ga0137404_12208906	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	515	Open in IMG/M
3300012977\|Ga0134087_10846322	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	500	Open in IMG/M
3300015356\|Ga0134073_10140203	All Organisms → cellular organisms → Bacteria	755	Open in IMG/M
3300017966\|Ga0187776_10103657	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium ADurb.Bin474	1698	Open in IMG/M
3300017997\|Ga0184610_1008757	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2485	Open in IMG/M
3300018028\|Ga0184608_10021210	All Organisms → cellular organisms → Bacteria	2360	Open in IMG/M
3300018071\|Ga0184618_10021210	All Organisms → cellular organisms → Bacteria	2130	Open in IMG/M
3300018468\|Ga0066662_11695379	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	661	Open in IMG/M
3300018482\|Ga0066669_11020194	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	747	Open in IMG/M
3300021073\|Ga0210378_10221407	All Organisms → cellular organisms → Bacteria	720	Open in IMG/M
3300025885\|Ga0207653_10022646	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1996	Open in IMG/M
3300025910\|Ga0207684_10921626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	734	Open in IMG/M
3300025922\|Ga0207646_10045793	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	3925	Open in IMG/M
3300025934\|Ga0207686_10265274	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1261	Open in IMG/M
3300026296\|Ga0209235_1027656	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	2957	Open in IMG/M
3300026296\|Ga0209235_1073269	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1554	Open in IMG/M
3300026298\|Ga0209236_1104107	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1273	Open in IMG/M
3300026301\|Ga0209238_1007954	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4204	Open in IMG/M
3300026307\|Ga0209469_1037476	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1589	Open in IMG/M
3300026307\|Ga0209469_1143551	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	531	Open in IMG/M
3300026310\|Ga0209239_1061627	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1661	Open in IMG/M
3300026310\|Ga0209239_1096056	All Organisms → cellular organisms → Bacteria	1263	Open in IMG/M
3300026316\|Ga0209155_1001626	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae	10550	Open in IMG/M
3300026328\|Ga0209802_1058937	All Organisms → cellular organisms → Bacteria	1863	Open in IMG/M
3300026332\|Ga0209803_1272877	All Organisms → cellular organisms → Bacteria	580	Open in IMG/M
3300026335\|Ga0209804_1117689	All Organisms → cellular organisms → Bacteria	1208	Open in IMG/M
3300026523\|Ga0209808_1152312	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	886	Open in IMG/M
3300026523\|Ga0209808_1321320	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	502	Open in IMG/M
3300026527\|Ga0209059_1105822	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	1123	Open in IMG/M
3300026527\|Ga0209059_1269213	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	573	Open in IMG/M
3300026529\|Ga0209806_1158616	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	853	Open in IMG/M
3300027787\|Ga0209074_10565015	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	503	Open in IMG/M
3300028536\|Ga0137415_10402989	All Organisms → cellular organisms → Bacteria	1172	Open in IMG/M
3300028819\|Ga0307296_10813408	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	509	Open in IMG/M
3300031226\|Ga0307497_10507490	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	596	Open in IMG/M
3300032211\|Ga0310896_10585210	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	621	Open in IMG/M
3300032770\|Ga0335085_10246902	All Organisms → cellular organisms → Bacteria	2148	Open in IMG/M
3300032770\|Ga0335085_10380602	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	1644	Open in IMG/M
3300032828\|Ga0335080_10474179	All Organisms → cellular organisms → Bacteria	1332	Open in IMG/M
3300032897\|Ga0335071_10041477	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → Gemmatimonadetes → Gemmatimonadales → Gemmatimonadaceae → Gemmatirosa → Gemmatirosa kalamazoonesis	4549	Open in IMG/M
3300033433\|Ga0326726_10167253	All Organisms → cellular organisms → Bacteria	2014	Open in IMG/M
3300034164\|Ga0364940_0072554	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes → unclassified Gemmatimonadetes → Gemmatimonadetes bacterium	948	Open in IMG/M
3300034178\|Ga0364934_0315038	All Organisms → cellular organisms → Bacteria → FCB group → Gemmatimonadetes	593	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.54%
Host-Associated	Host-Associated	4.46%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	91.96%
Plants	Host-Associated → Plants	4.46%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	89.29%
Rhizosphere	Host-Associated → Plants → Rhizosphere	4.46%
Sediment	Environmental → Aquatic → Sediment	2.68%
Floodplain	Environmental → Terrestrial → Floodplain	1.79%
Freshwater	Environmental → Aquatic → Freshwater	0.89%
Peat	Environmental → Terrestrial → Peat	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	78.57%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	4.46%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Sediment	Environmental → Terrestrial → Floodplain → Sediment	1.79%
Sediment	Environmental → Aquatic → Freshwater → Sediment	0.89%
Sand	Environmental → Terrestrial → Soil → Sand	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	37.50%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	36.61%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	4.46%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	4.46%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	3.57%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	3.57%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Grasslands	Environmental → Terrestrial → Soil → Loam → Grasslands	1.79%
Unclassified	Environmental → Terrestrial → Floodplain → Sediment → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	0.89%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	0.89%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	27.68%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	26.79%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	9.82%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	8.04%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	3.57%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.57%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	2.68%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	2.68%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Soil	Environmental → Terrestrial → Soil → Loam → Grasslands → Soil	1.79%
Sediment	Environmental → Terrestrial → Floodplain → Sediment → Unclassified → Sediment	1.79%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	0.89%
Peat Soil	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil	0.89%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere	0.89%
Miscanthus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300004479	Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of All WPAs	Environmental	Open in IMG/M
3300005171	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_126	Environmental	Open in IMG/M
3300005187	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_124	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005546	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaG	Environmental	Open in IMG/M
3300005552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150	Environmental	Open in IMG/M
3300005556	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_156	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148	Environmental	Open in IMG/M
3300005576	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157	Environmental	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300006854	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4	Host-Associated	Open in IMG/M
3300006903	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD5	Host-Associated	Open in IMG/M
3300006954	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control	Environmental	Open in IMG/M
3300007004	Agricultural soil microbial communities from Utah to study Nitrogen management - NC Compost	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009147	Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)	Host-Associated	Open in IMG/M
3300009553	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG	Host-Associated	Open in IMG/M
3300009821	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_20_30	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010321	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010323	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010326	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012211	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_40_16 metaG	Environmental	Open in IMG/M
3300012285	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_20_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012977	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300015356	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_24_1 metaG	Environmental	Open in IMG/M
3300017966	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MG	Environmental	Open in IMG/M
3300017997	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_coex	Environmental	Open in IMG/M
3300018028	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_30_coex	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021073	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60_b1 redo	Environmental	Open in IMG/M
3300025885	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025910	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300025934	Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)	Host-Associated	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026307	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123 (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026316	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_122 (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139 (SPAdes)	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300028819	Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_153	Environmental	Open in IMG/M
3300031226	Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_S	Environmental	Open in IMG/M
3300032211	Lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8D1	Environmental	Open in IMG/M
3300032770	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5	Environmental	Open in IMG/M
3300032828	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.4	Environmental	Open in IMG/M
3300032897	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_1.5	Environmental	Open in IMG/M
3300033433	Lab enriched peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF15MN	Environmental	Open in IMG/M
3300034164	Sediment microbial communities from East River floodplain, Colorado, United States - 14_s17	Environmental	Open in IMG/M
3300034178	Sediment microbial communities from East River floodplain, Colorado, United States - 27_j17	Environmental	Open in IMG/M

Geographical Distribution

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Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.51
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.51
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F084024

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0062595_1004222432	3300004479	Soil	VGTGVLGFDPGLLQAIADRVGTPAYVYSTHLIRAQYNALDDALHGIK
Ga0066677_106533711	3300005171	Soil	VGAAALGFDPALLRGIAERVGTPAYVYSSNLIRAQYHALHDAL
Ga0066675_100594443	3300005187	Soil	MGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDAL
Ga0066686_107696871	3300005446	Soil	VGPGVLGFDPALLRSIAERVGTPVYVYGANLIRAQYHALHDALQ
Ga0066686_108582951	3300005446	Soil	VQQVGTALGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDALK
Ga0066686_109871592	3300005446	Soil	VGAGALGFDPALLRSIADRVGTPAYVYSANLIRAQYHALQDALKDV
Ga0066689_100852711	3300005447	Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQ
Ga0066697_100213831	3300005540	Soil	VGAGVLGFDPALLRGIAERVGTPAYVYSANLMRAQYHALH
Ga0066697_102606382	3300005540	Soil	VGAGVLGRSPLGFDPALLRAIGERVGTPTYVYSANLIRAQYHALDDALKDI
Ga0070696_1003684941	3300005546	Corn, Switchgrass And Miscanthus Rhizosphere	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDAL
Ga0066701_104785681	3300005552	Soil	VGAGALGFDPALLRCIAERVGTPAYVYSANLIRAQYHALQDALKDV
Ga0066707_106992711	3300005556	Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALH
Ga0066707_108259611	3300005556	Soil	VQQVGTALGFDPALLRSIAERVGTPTYVYSANLIRAQ
Ga0066704_101646391	3300005557	Soil	VGAAALGFDPALLRGIAERVGTPAYVYSANLIRAQYH
Ga0066704_101758443	3300005557	Soil	VGAGVLGFDPALLRGIAERVGTPAYVYSANLIRAQYHALHDAL
Ga0066704_102905301	3300005557	Soil	MGTGVLGFDPALLRAIAERVGTPTYVYSANLIRAQYHALHDAL
Ga0066704_108743923	3300005557	Soil	MVGTALGFDPALLRSIAERVGTPAYVYSANLIRAQYHALQD
Ga0066699_101806851	3300005561	Soil	VGAGVLGFDPALLRGIAQRVGTPAYVYSANLIRAQYH
Ga0066699_102932951	3300005561	Soil	VGASVLAFDPALLRSIAERVGTPTYVYSANLIRAQY
Ga0066708_107752742	3300005576	Soil	VGAAALGFDPALLRGIAERVGTPAYVYSSNLIRAQYHALQDALKDVP
Ga0066651_103905062	3300006031	Soil	VGAGVLGFDPGLLQAIADRIGTPAYVYSANLIRAQYNALADALH
Ga0066656_104297654	3300006034	Soil	MGASVLGFDPALLRGIAERVGTPAYVYSANLIRAQYHALHDAL
Ga0066653_106747942	3300006791	Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQYHAL
Ga0066659_114150321	3300006797	Soil	MGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDA
Ga0075425_1027556572	3300006854	Populus Rhizosphere	VGTGVLGFDPGLLQAIADRVGTPAYVYSTNLIRAQYNALHDALHGIKH
Ga0075426_114937732	3300006903	Populus Rhizosphere	VGAGVLTPRPVGLDPALLRSIAVRVGTPAYVYSAGLIRAQY
Ga0079219_106283371	3300006954	Agricultural Soil	VGAGVLGFDPALLRSVAERVGTPVYVYSANLIRAQYHALHDA
Ga0079218_103932842	3300007004	Agricultural Soil	LGSGVLGFDPALLQSIADRIGTPAYVYSTNLIRAQYHALDDALKSI
Ga0099791_101849472	3300007255	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQYHALHDA
Ga0099793_102440262	3300007258	Vadose Zone Soil	VGAGVLAFDPALLRSIAERVGTPTYVYSGNLIRAQYHALHDAL
Ga0099793_106291101	3300007258	Vadose Zone Soil	VGAGVLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHALDDA
Ga0066710_1018941612	3300009012	Grasslands Soil	VGAGVLGFDPALLRAIAQRVGTPVYVYSANLIRAQYHALHDAL
Ga0099829_100216185	3300009038	Vadose Zone Soil	MGTGVLGFDPALLRAVAERVGTPTYVYSANLIRAQYHALHDALHD
Ga0099830_102272642	3300009088	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQYH
Ga0099830_104037582	3300009088	Vadose Zone Soil	MGTGVLGFDPALLRAVAERVGTPTYVYSANLIRAQY
Ga0099828_117150911	3300009089	Vadose Zone Soil	MGTGLLGFDPALLRAVAERVGTPTYVYSANLIRAQYHA
Ga0066709_1007581702	3300009137	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDALK
Ga0066709_1033737422	3300009137	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQYHALH
Ga0114129_110808671	3300009147	Populus Rhizosphere	MMGTGILGFDPALLTAIATRVGTPAYVYGANLIRAQYHALDD
Ga0105249_130445632	3300009553	Switchgrass Rhizosphere	VGAGVLGFDPGLLQAIADRIGTPAYVYSANLIRAQYNA
Ga0105064_10407551	3300009821	Groundwater Sand	VGAGVLGFDPALLRSIAERVGTPVYVYSANLIRAQYHALSDALQAV
Ga0134070_100683132	3300010301	Grasslands Soil	VGAGVLGFDPALLRAIGERVGTPAYVYSANLIRAQYHA
Ga0134067_102014812	3300010321	Grasslands Soil	VGAGVLGFDPGLLQAIADRIGTPAYVYSTNLIRAQY
Ga0134084_100828792	3300010322	Grasslands Soil	VGAGVLGFDPALLRSIAERIGTPTYVYSANLIRAQYHALH
Ga0134086_105070542	3300010323	Grasslands Soil	MGTGVLGFDPALLRSIAERVGTPAYVYSANLIRAQYHALQDA
Ga0134065_100102864	3300010326	Grasslands Soil	VGAAVLGFDPALLRGIAERVGTPAYVYSSNLIRAQYHAL
Ga0134111_101162301	3300010329	Grasslands Soil	VGAGVLGFDPALLRGIAERVGTPAYVYSANLIRAQYHALHDALKD
Ga0134062_102306192	3300010337	Grasslands Soil	VGAGVLGFDPALLRAIGERVGTPTYVYSANLIRAQ
Ga0137393_111720761	3300011271	Vadose Zone Soil	MGTGLLGFDPALLRAVAERVGTPTYVYSANLIRAQYHALHDA
Ga0137389_106540211	3300012096	Vadose Zone Soil	MGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHAL
Ga0137364_101111513	3300012198	Vadose Zone Soil	VQQVGTALGFDPALLRSIAERVGTPTYVYSGNLIRAQYHALHDAL
Ga0137364_106239042	3300012198	Vadose Zone Soil	LRGDDDVQQVGTALAFDPALLRSIAERVGTPTYVYSANLI
Ga0137380_102881001	3300012206	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQD
Ga0137381_111118702	3300012207	Vadose Zone Soil	MGPVVLGFDPALLRSIAERVGTPVYVYGANLIRAQYHALHDALQ
Ga0137376_100551987	3300012208	Vadose Zone Soil	MNVGTGVLGFDPGLLQAIADRIGTPAYVYSANLIRAQYNALDD
Ga0137376_111123112	3300012208	Vadose Zone Soil	VGAAALGFDPALLRGIAERVGTPAYVYSSNLIRAQYHALHDALK
Ga0137376_111810441	3300012208	Vadose Zone Soil	VGAGVLAFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDALKDV
Ga0137379_104630441	3300012209	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDALKD
Ga0137379_112190911	3300012209	Vadose Zone Soil	VTQHVGTALGFDPALLRSIADRVGTPAYIYSANLI
Ga0137378_103143591	3300012210	Vadose Zone Soil	VGAGVLGFDPALLSSIAQRLGTPVYVYGANLIRAQYHALQDA
Ga0137377_100965847	3300012211	Vadose Zone Soil	MGPVVLGFDPALLRSIAERVGTPVYVYGANLIRAQYH
Ga0137370_106267201	3300012285	Vadose Zone Soil	MGAGALGFDPALLRSIAERIGTPTYVYSANLIRAQYHALHDALKD
Ga0137366_101351343	3300012354	Vadose Zone Soil	VGAGVLGFDPALLRGIAERVGTPAYVYSANLIRAQYH
Ga0137384_100462984	3300012357	Vadose Zone Soil	VGAGVLAFDPALLRSIAERVGTPTYVYSGNLIRAQYHA
Ga0137384_109845782	3300012357	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPAYVYSANLIRAQYHALHDALKD
Ga0137385_100051611	3300012359	Vadose Zone Soil	VGTSVLGRSPLGFDPALLRAIGERVGTPTYVYSANLIRAQYHALDDAL
Ga0137385_104672672	3300012359	Vadose Zone Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQYHALQDALKD
Ga0137396_103683832	3300012918	Vadose Zone Soil	VGAGVLGFDPGLLQAIADRIGTPAYVYSTNLIRAQYNA
Ga0137394_108488631	3300012922	Vadose Zone Soil	VGAGVLAFDPALLRSIAERVGTPTYVYSGNLIRAQYH
Ga0137404_122089062	3300012929	Vadose Zone Soil	VGAGVLGFDPSLLRSIAERVGTPTYVYSGNLIRAQYHA
Ga0134087_108463222	3300012977	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSGNLIRAQY
Ga0134073_101402033	3300015356	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHAL
Ga0187776_101036571	3300017966	Tropical Peatland	MTERATAVLGFDPALLTAIAERTGTPVYVYSANLIRAQYHALHDALQ
Ga0184610_10087571	3300017997	Groundwater Sediment	VGAGVLGFDPGLLQAIADRIGTPAYVYSTNLIRAQYHAL
Ga0184608_100212104	3300018028	Groundwater Sediment	MGAGVLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHAL
Ga0184618_100212101	3300018071	Groundwater Sediment	MGAGVLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHALDD
Ga0066662_116953792	3300018468	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPVYVYSANLIRAQYHALHDALHD
Ga0066669_110201942	3300018482	Grasslands Soil	VQQVGTALGFDPALLRSIAERVGTPTYVYSANLIRAQYH
Ga0210378_102214072	3300021073	Groundwater Sediment	MGAGVLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHA
Ga0207653_100226463	3300025885	Corn, Switchgrass And Miscanthus Rhizosphere	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDALK
Ga0207684_109216261	3300025910	Corn, Switchgrass And Miscanthus Rhizosphere	VGAGVLGIDPALLQAIADRVGTPAYVYSANLIRAQYHALDDALQ
Ga0207646_100457934	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	VGAGVLGFDPGLLQAIADRVRTPAYVYSTNLIRAQYHALDDA
Ga0207686_102652743	3300025934	Miscanthus Rhizosphere	VGAGVLGFDPGLLQAIADRIGTPAYVYSTNLIRAQYNALDDAL
Ga0209235_10276561	3300026296	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDA
Ga0209235_10732692	3300026296	Grasslands Soil	MGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALQDA
Ga0209236_11041073	3300026298	Grasslands Soil	LTARVGTALGFDPALLRSIAERVGTPAYVYSANLIRAQYHALQDA
Ga0209238_10079545	3300026301	Grasslands Soil	VGAGVLGFDPALLRSIGERVGTPTYVYSANLIRAQYHALDD
Ga0209469_10374762	3300026307	Soil	VGAGVLGFDPALLRSIAERVGTPVYVYSANLIRAQYHALHDALHDV
Ga0209469_11435512	3300026307	Soil	VGAGVLGFDPALLRAIGERVGTPAYVYSANLIRAQYHALDDALKDI
Ga0209239_10616271	3300026310	Grasslands Soil	VGAGVLEFDPALLRSIAERVGTPTYVYSGNLIRAQYHALH
Ga0209239_10960562	3300026310	Grasslands Soil	VGAGVLGFDPALLRSIAERVGTPAYVYSANLIRAQY
Ga0209155_10016261	3300026316	Soil	VGAGVLGLDPALLRSIAERVGTPTYVYSANLIRAPYHALQDALKDV
Ga0209802_10589371	3300026328	Soil	VGPGVLGFDPALLRSIAERVGTPVYVYGANLIRAQYHALHDA
Ga0209803_12728771	3300026332	Soil	VGAAALGFDPALLRGIAERVGTPAYVYSANLIRAQYHAP
Ga0209804_11176892	3300026335	Soil	VGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDA
Ga0209808_11523122	3300026523	Soil	VSAGVLGFDPALLRGIAERVGTPAYVYSANLIRAQYHALHDAL
Ga0209808_13213202	3300026523	Soil	MGAGVLGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDALK
Ga0209059_11058221	3300026527	Soil	VGAGVLGFDPALLRGIAQRVGTPAYVYSANLIRAQYHA
Ga0209059_12692132	3300026527	Soil	VGAGVLGFDPALLRSIAERVGTPAYVYSANLIRGQYHALHDALK
Ga0209806_11586162	3300026529	Soil	MGAALGFDPALLRSIAERVGTPTYVYSANLIRAQYHALHDALK
Ga0209074_105650151	3300027787	Agricultural Soil	VGAGVLGFDPALLRAIAERVGTPAYVYSANLIRAHYN
Ga0137415_104029892	3300028536	Vadose Zone Soil	VGTGVLGFDPGLLQAIADRIGTPAYVYSANLIRAQYNA
Ga0307296_108134082	3300028819	Soil	VGAGVLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHALDD
Ga0307497_105074901	3300031226	Soil	MTAVLGFDPALLTAIADRTGTPVYVYSANLIRAQYHAL
Ga0310896_105852101	3300032211	Soil	VGAGVLGFDPGLLQAIADRIGTPAYVYSTNLIRAQYNALSDALH
Ga0335085_102469021	3300032770	Soil	VTVATKHAKAGAGVLGFDPALLQAIADREGTPAYVYGVNLIRAQFHALDDALQ
Ga0335085_103806023	3300032770	Soil	VTVATKHAKVGAGVLGFDPALLQAVADRVGTPAYVYGANLIRAQFHALDDA
Ga0335080_104741791	3300032828	Soil	VGTGVLGLDPALLTAIARRVGTPAYVYGANLIRAQFHALEDALRSAGV
Ga0335071_100414771	3300032897	Soil	VGTGVLGLDPALLTAVARRVGTPTYVYSANLIRAQFHALEDALRSAGV
Ga0326726_101672533	3300033433	Peat Soil	VGAGVLGFDPALLEGIVSRVGTPVYVYGANLIRAQFHALDDALQAI
Ga0364940_0072554_1_117	3300034164	Sediment	MGAGVLGIDPGLLQTIADRVGTPAYVYSANLIRAQYHAL
Ga0364934_0315038_2_124	3300034178	Sediment	MGAGLLGIDPGLLQAIADRVGTPAYVYSANLIRAQYHALDD

Hidden Markov Model


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