Metagenome / Metatranscriptome Family F083964

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083964
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	82 residues
Representative Sequence	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKQSALTWRVRKIGELRSEQETA
Number of Associated Samples	75
Number of Associated Scaffolds	110

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	70.54 %
% of genes near scaffold ends (potentially truncated)	33.93 %
% of genes from short scaffolds (< 2000 bps)	94.64 %
Associated GOLD sequencing projects	69
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (96.429 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (66.071 % of family members)
Environment Ontology (ENVO)	Unclassified (67.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (70.536 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 9.21% β-sheet: 26.32% Coil/Unstructured: 64.47%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 110 Family Scaffolds
PF01435	Peptidase_M48	6.36
PF06167	Peptidase_M90	2.73
PF08445	FR47	1.82
PF08448	PAS_4	1.82
PF06574	FAD_syn	1.82
PF01904	DUF72	1.82
PF16980	CitMHS_2	1.82
PF10458	Val_tRNA-synt_C	1.82
PF13411	MerR_1	1.82
PF00072	Response_reg	0.91
PF03693	ParD_antitoxin	0.91
PF00201	UDPGT	0.91
PF00400	WD40	0.91
PF04820	Trp_halogenase	0.91
PF13302	Acetyltransf_3	0.91
PF06745	ATPase	0.91
PF09995	MPAB_Lcp_cat	0.91
PF00291	PALP	0.91
PF00171	Aldedh	0.91
PF00709	Adenylsucc_synt	0.91
PF12715	Abhydrolase_7	0.91

COG ID	Name	Functional Category	% Frequency in 110 Family Scaffolds
COG3228	Mlc titration factor MtfA, regulates ptsG expression	Signal transduction mechanisms [T]	2.73
COG0196	FAD synthase	Coenzyme transport and metabolism [H]	1.82
COG1801	Sugar isomerase-related protein YecE, UPF0759/DUF72 family	General function prediction only [R]	1.82
COG1819	UDP:flavonoid glycosyltransferase YjiC, YdhE family	Carbohydrate transport and metabolism [G]	1.82
COG0014	Gamma-glutamyl phosphate reductase	Amino acid transport and metabolism [E]	0.91
COG0104	Adenylosuccinate synthase	Nucleotide transport and metabolism [F]	0.91
COG1012	Acyl-CoA reductase or other NAD-dependent aldehyde dehydrogenase	Lipid transport and metabolism [I]	0.91
COG3609	Transcriptional regulator, contains Arc/MetJ-type RHH (ribbon-helix-helix) DNA-binding domain	Transcription [K]	0.91
COG4230	Delta 1-pyrroline-5-carboxylate dehydrogenase	Amino acid transport and metabolism [E]	0.91

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	96.43 %
Unclassified	root	N/A	3.57 %

Name	Rank	Taxonomy	Distribution
FCB group	clade	All Organisms → cellular organisms → Bacteria → FCB group	68.75 %
PVC group	clade	All Organisms → cellular organisms → Bacteria → PVC group	17.86 %
Unclassified	root	N/A	3.57 %
Bacteria incertae sedis	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis	0.89 %

Name	Rank	Taxonomy	Distribution
Bacteroidetes/Chlorobi group	clade	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group	68.75 %
Verrucomicrobia	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia	15.18 %
Unclassified	root	N/A	3.57 %
Planctomycetes	phylum	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes	2.68 %
Bacteria candidate phyla	clade	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla	0.89 %

Name	Rank	Taxonomy	Distribution
Ignavibacteriae	phylum	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae	68.75 %
unclassified Verrucomicrobia	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia	13.39 %
Unclassified	root	N/A	3.57 %
Planctomycetia	class	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia	2.68 %
Verrucomicrobiae	class	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae	1.79 %
Candidatus Rokubacteria	phylum	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Ignavibacteria	class	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria	68.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.39 %
Unclassified	root	N/A	3.57 %
Verrucomicrobiales	order	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales	1.79 %
Gemmatales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales	1.79 %
Planctomycetales	order	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales	0.89 %
unclassified Candidatus Rokubacteria	no rank	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Ignavibacteria	no rank	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria	68.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.39 %
Unclassified	root	N/A	3.57 %
Gemmataceae	family	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae	1.79 %
unclassified Verrucomicrobiales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales	1.79 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %
unclassified Planctomycetales	no rank	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales	0.89 %

Name	Rank	Taxonomy	Distribution
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	68.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.39 %
Unclassified	root	N/A	3.57 %
Limnoglobus	genus	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus	1.79 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.79 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Ignavibacteria bacterium 13_1_40CM_2_61_4	species	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	68.75 %
Verrucomicrobia bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	13.39 %
Unclassified	root	N/A	3.57 %
Limnoglobus roseus	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	1.79 %
Verrucomicrobiales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1.79 %
Planctomycetales bacterium	species	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	0.89 %
Candidatus Rokubacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001213\|JGIcombinedJ13530_101350488	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	613	Open in IMG/M
3300002561\|JGI25384J37096_10126474	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	849	Open in IMG/M
3300005180\|Ga0066685_10589119	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	766	Open in IMG/M
3300005330\|Ga0070690_100337399	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1091	Open in IMG/M
3300005451\|Ga0066681_10238214	All Organisms → cellular organisms → Bacteria	1100	Open in IMG/M
3300005466\|Ga0070685_10160355	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → Verrucomicrobiae → Verrucomicrobiales → unclassified Verrucomicrobiales → Verrucomicrobiales bacterium	1433	Open in IMG/M
3300005537\|Ga0070730_10084051	All Organisms → cellular organisms → Bacteria	2225	Open in IMG/M
3300005540\|Ga0066697_10382455	Not Available	818	Open in IMG/M
3300005540\|Ga0066697_10780463	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	520	Open in IMG/M
3300005541\|Ga0070733_10678741	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	691	Open in IMG/M
3300005586\|Ga0066691_10755983	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	574	Open in IMG/M
3300005598\|Ga0066706_10685556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	814	Open in IMG/M
3300005841\|Ga0068863_101677093	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	645	Open in IMG/M
3300006031\|Ga0066651_10496949	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	646	Open in IMG/M
3300006034\|Ga0066656_10225677	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1198	Open in IMG/M
3300006034\|Ga0066656_11128829	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	504	Open in IMG/M
3300006797\|Ga0066659_11003599	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	698	Open in IMG/M
3300007258\|Ga0099793_10694378	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	513	Open in IMG/M
3300007265\|Ga0099794_10476840	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	655	Open in IMG/M
3300009012\|Ga0066710_100945949	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1328	Open in IMG/M
3300009012\|Ga0066710_102630041	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	722	Open in IMG/M
3300009012\|Ga0066710_104851762	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	503	Open in IMG/M
3300009038\|Ga0099829_11304177	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	600	Open in IMG/M
3300009090\|Ga0099827_11049996	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	707	Open in IMG/M
3300009090\|Ga0099827_11772475	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	538	Open in IMG/M
3300009137\|Ga0066709_100341009	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	2055	Open in IMG/M
3300009137\|Ga0066709_101369827	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1031	Open in IMG/M
3300009137\|Ga0066709_104605858	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	504	Open in IMG/M
3300009143\|Ga0099792_10609213	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	697	Open in IMG/M
3300010124\|Ga0127498_1085876	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	508	Open in IMG/M
3300010329\|Ga0134111_10221743	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	769	Open in IMG/M
3300010397\|Ga0134124_10918268	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	883	Open in IMG/M
3300010403\|Ga0134123_11710415	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	680	Open in IMG/M
3300011269\|Ga0137392_11577881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	515	Open in IMG/M
3300011270\|Ga0137391_10528181	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	996	Open in IMG/M
3300011270\|Ga0137391_11010317	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	676	Open in IMG/M
3300011271\|Ga0137393_10663194	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	894	Open in IMG/M
3300011271\|Ga0137393_10768132	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	824	Open in IMG/M
3300012096\|Ga0137389_10285932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300012096\|Ga0137389_10285932	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1393	Open in IMG/M
3300012189\|Ga0137388_10529900	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1094	Open in IMG/M
3300012189\|Ga0137388_11556502	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	597	Open in IMG/M
3300012199\|Ga0137383_10401293	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1004	Open in IMG/M
3300012199\|Ga0137383_10847449	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	667	Open in IMG/M
3300012200\|Ga0137382_10432828	Not Available	930	Open in IMG/M
3300012201\|Ga0137365_10245301	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	1333	Open in IMG/M
3300012201\|Ga0137365_10307385	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300012202\|Ga0137363_10532699	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	988	Open in IMG/M
3300012202\|Ga0137363_10773709	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	814	Open in IMG/M
3300012202\|Ga0137363_10974994	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	720	Open in IMG/M
3300012202\|Ga0137363_11355468	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	601	Open in IMG/M
3300012204\|Ga0137374_11099161	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	566	Open in IMG/M
3300012205\|Ga0137362_10189328	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1770	Open in IMG/M
3300012205\|Ga0137362_10206815	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1690	Open in IMG/M
3300012206\|Ga0137380_10346881	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1325	Open in IMG/M
3300012206\|Ga0137380_11397074	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	585	Open in IMG/M
3300012206\|Ga0137380_11718059	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	511	Open in IMG/M
3300012208\|Ga0137376_10222550	Not Available	1635	Open in IMG/M
3300012208\|Ga0137376_10258069	All Organisms → cellular organisms → Bacteria	1512	Open in IMG/M
3300012208\|Ga0137376_10272538	All Organisms → cellular organisms → Bacteria	1468	Open in IMG/M
3300012209\|Ga0137379_10204323	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1889	Open in IMG/M
3300012209\|Ga0137379_10485313	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1144	Open in IMG/M
3300012209\|Ga0137379_10795959	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	850	Open in IMG/M
3300012210\|Ga0137378_10170702	All Organisms → cellular organisms → Bacteria	2020	Open in IMG/M
3300012210\|Ga0137378_11328914	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	634	Open in IMG/M
3300012349\|Ga0137387_10072064	All Organisms → cellular organisms → Bacteria	2356	Open in IMG/M
3300012349\|Ga0137387_10930337	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	627	Open in IMG/M
3300012350\|Ga0137372_10728833	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	716	Open in IMG/M
3300012350\|Ga0137372_10941966	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	608	Open in IMG/M
3300012351\|Ga0137386_10049378	Not Available	2904	Open in IMG/M
3300012354\|Ga0137366_10508123	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Gemmatales → Gemmataceae → Limnoglobus → Limnoglobus roseus	870	Open in IMG/M
3300012354\|Ga0137366_10527869	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	851	Open in IMG/M
3300012357\|Ga0137384_11434367	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	539	Open in IMG/M
3300012359\|Ga0137385_11004540	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	688	Open in IMG/M
3300012361\|Ga0137360_10248280	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1460	Open in IMG/M
3300012361\|Ga0137360_11003556	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	720	Open in IMG/M
3300012361\|Ga0137360_11790425	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	520	Open in IMG/M
3300012362\|Ga0137361_10739377	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	897	Open in IMG/M
3300012362\|Ga0137361_11141991	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	701	Open in IMG/M
3300012362\|Ga0137361_11185120	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	686	Open in IMG/M
3300012362\|Ga0137361_11241423	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	669	Open in IMG/M
3300012362\|Ga0137361_11695269	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	552	Open in IMG/M
3300012363\|Ga0137390_10727693	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	953	Open in IMG/M
3300012398\|Ga0134051_1212749	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	513	Open in IMG/M
3300012582\|Ga0137358_10481931	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	836	Open in IMG/M
3300012582\|Ga0137358_10519184	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	802	Open in IMG/M
3300012683\|Ga0137398_10567464	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	783	Open in IMG/M
3300012917\|Ga0137395_10460889	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	913	Open in IMG/M
3300012923\|Ga0137359_10277611	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1494	Open in IMG/M
3300012923\|Ga0137359_10277611	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1494	Open in IMG/M
3300012923\|Ga0137359_10665991	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	909	Open in IMG/M
3300012929\|Ga0137404_11941014	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	548	Open in IMG/M
3300012930\|Ga0137407_11971071	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	557	Open in IMG/M
3300012944\|Ga0137410_10897201	All Organisms → cellular organisms → Bacteria	749	Open in IMG/M
3300015053\|Ga0137405_1072199	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	627	Open in IMG/M
3300015241\|Ga0137418_10466656	All Organisms → cellular organisms → Bacteria	1016	Open in IMG/M
3300015245\|Ga0137409_10416866	All Organisms → cellular organisms → Bacteria	1160	Open in IMG/M
3300016319\|Ga0182033_10312790	All Organisms → cellular organisms → Bacteria → Bacteria incertae sedis → Bacteria candidate phyla → Candidatus Rokubacteria → unclassified Candidatus Rokubacteria → Candidatus Rokubacteria bacterium	1301	Open in IMG/M
3300018071\|Ga0184618_10350669	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	629	Open in IMG/M
3300018468\|Ga0066662_10828395	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	901	Open in IMG/M
3300018482\|Ga0066669_10378859	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	1188	Open in IMG/M
3300019789\|Ga0137408_1283724	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	543	Open in IMG/M
3300020199\|Ga0179592_10229599	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	837	Open in IMG/M
3300020199\|Ga0179592_10357568	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	642	Open in IMG/M
3300021344\|Ga0193719_10400641	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	565	Open in IMG/M
3300021363\|Ga0193699_10489398	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	503	Open in IMG/M
3300025936\|Ga0207670_10034282	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	3279	Open in IMG/M
3300026088\|Ga0207641_10495292	All Organisms → cellular organisms → Bacteria → PVC group → Planctomycetes → Planctomycetia → Planctomycetales → unclassified Planctomycetales → Planctomycetales bacterium	1186	Open in IMG/M
3300026551\|Ga0209648_10509245	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	693	Open in IMG/M
3300026557\|Ga0179587_10265034	All Organisms → cellular organisms → Bacteria → PVC group → Verrucomicrobia → unclassified Verrucomicrobia → Verrucomicrobia bacterium	1102	Open in IMG/M
3300027857\|Ga0209166_10237416	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	971	Open in IMG/M
3300027862\|Ga0209701_10408653	All Organisms → cellular organisms → Bacteria → FCB group → Bacteroidetes/Chlorobi group → Ignavibacteriae → Ignavibacteria → unclassified Ignavibacteria → Ignavibacteria bacterium 13_1_40CM_2_61_4	755	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.21%
Host-Associated	Host-Associated	1.79%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	1.79%
Plants	Host-Associated → Plants	1.79%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Rhizoplane	Host-Associated → Plants → Rhizoplane	1.79%
Marine	Environmental → Aquatic → Marine	0.89%
Sediment	Environmental → Aquatic → Sediment	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.75%
Loam	Environmental → Terrestrial → Soil → Loam	2.68%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	75.00%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	17.86%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	2.68%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.89%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	66.07%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	8.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	8.93%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	2.68%
Switchgrass Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	1.79%
Switchgrass Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere	1.79%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.89%
Groundwater Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300002561	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005330	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3H metaG	Environmental	Open in IMG/M
3300005451	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_130	Environmental	Open in IMG/M
3300005466	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3L metaG	Environmental	Open in IMG/M
3300005537	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005586	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_140	Environmental	Open in IMG/M
3300005598	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_155	Environmental	Open in IMG/M
3300005841	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2	Host-Associated	Open in IMG/M
3300006031	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100	Environmental	Open in IMG/M
3300006034	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_105	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009137	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_11112015	Environmental	Open in IMG/M
3300010397	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4	Environmental	Open in IMG/M
3300010403	Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012200	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaG	Environmental	Open in IMG/M
3300012201	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_40_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012204	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_100_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012350	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_60_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012354	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_60_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012359	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_80_16 metaG	Environmental	Open in IMG/M
3300012361	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012398	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_2_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012582	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_20_16 metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012917	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk2.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300015053	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300015241	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_2_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300015245	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300018071	Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300019789	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300021344	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U2a2	Environmental	Open in IMG/M
3300021363	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L3c2	Environmental	Open in IMG/M
3300025936	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3H metaG (SPAdes)	Environmental	Open in IMG/M
3300026088	Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026551	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_115cm (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGIcombinedJ13530_1013504882	3300001213	Wetland	GYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPIGEFRKQAAQTWRVRKIGELRSEQETT*
JGI25384J37096_101264741	3300002561	Grasslands Soil	MLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSIRKGSAQTWRVRKIGELRSEQETA*
Ga0066685_105891191	3300005180	Soil	LLGSKDSHKQVNHGGRNWGRKLVSQMLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0070690_1003373993	3300005330	Switchgrass Rhizosphere	MLKVNETVTGYDLGELLHGEAGLFEAITPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVREI
Ga0066681_102382141	3300005451	Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPISESRKQNNQTWRVRKIGELRSEQDTA*
Ga0070685_101603552	3300005466	Switchgrass Rhizosphere	MLKVNETVTGYDLGELLHGEAGLFEAVTPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVRKIGELRSEQDTA*
Ga0070730_100840512	3300005537	Surface Soil	MVRKMLKVNETITGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESKKTANQTWRVRKIGELRSEQDTA*
Ga0066697_103824552	3300005540	Soil	FAKKLFALRRVVWKISLLGSSCLYTQNSLGGEIWGRKLVSEMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPISETRKPSAQTWRVRKIGELRSEQDTA*
Ga0066697_107804631	3300005540	Soil	MLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0070733_106787412	3300005541	Surface Soil	VNEMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARTGHSITNLRPIGESRKHTNQTWRVRKIGELRSEQDTA*
Ga0066691_107559832	3300005586	Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPISETRKPSAQTWRVRK
Ga0066706_106855562	3300005598	Soil	GRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA*
Ga0068863_1016770932	3300005841	Switchgrass Rhizosphere	MLKVNETVTGYDLGELLHGEAGLFEAITPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVREIGELRSEQDTA*
Ga0066651_104969491	3300006031	Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPISESRKQNNQTWRVRKIGELRSEQETA*
Ga0066656_102256772	3300006034	Soil	MEGTKLGKKVGESNVEVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSIRKGSAQTWRVRKIGELRSEQETA*
Ga0066656_111288292	3300006034	Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCISRAGHSITNLRPISESKKQNNQTWRVRKIGELRSE
Ga0066659_110035991	3300006797	Soil	ISLLGSSCLYTQNSLGGEIWGRKLVSEMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPISETRKPSAQTWRVRKIGELRSEQDTA*
Ga0099793_106943781	3300007258	Vadose Zone Soil	MEARNWGRKLVSKMLRVNETITGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA*
Ga0099794_104768401	3300007265	Vadose Zone Soil	MLKVNETVTGYDLGEILHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGESRKANALTWRVRKIGELRSEQETA*
Ga0066710_1009459492	3300009012	Grasslands Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLGEFKKAAALTWRVRKIGELRSEQDTA
Ga0066710_1026300412	3300009012	Grasslands Soil	MLKVNETVTGFDLGELLHGEAGLFEAIAPSGDKFQCVARAGHSITNLRPLGEYSSRKGLAQTWRVRKIGELRSEQDTA
Ga0066710_1048517621	3300009012	Grasslands Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGNSITNLRPLGGSRKANTLTWRVRKIGELSAEQDTD
Ga0099829_113041771	3300009038	Vadose Zone Soil	VLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDTA*
Ga0099827_110499961	3300009090	Vadose Zone Soil	MLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA*
Ga0099827_117724751	3300009090	Vadose Zone Soil	MLRVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGEYSNRKASAQTWRVRKIGELRSEQETA*
Ga0066709_1003410092	3300009137	Grasslands Soil	MLGSSCLYTQNSLGGEIWGRKLVSEMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPISETRKPSAQTWRVRKIGELRSEQETA*
Ga0066709_1013698271	3300009137	Grasslands Soil	MRNILEAKIWGGKMVSEMLQVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSESRKTNALTWRVRKIGELRSEQDTA*
Ga0066709_1046058582	3300009137	Grasslands Soil	MLKVNETVTGYDLGEILHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGEYSSRKGLAQTWRVRKIGELRSEQDTA*
Ga0099792_106092131	3300009143	Vadose Zone Soil	IVESRLWKLFLEAKNWGRKKVSEMLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGETRKSNALTWRVRKIGELRSEQDTA*
Ga0127498_10858761	3300010124	Grasslands Soil	MLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQE
Ga0134111_102217432	3300010329	Grasslands Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCISRAGHSITNLRPIGESKKQNNQIWRVRKIGELRSEQDTA*
Ga0134124_109182682	3300010397	Terrestrial Soil	MLKVNETVTGYDLGELLHGEAGLFEAITPGGDKFQCVARAGHSITNLRPISESRKQNNQTWRVRKIGELRSEQDTA*
Ga0134123_117104151	3300010403	Terrestrial Soil	GYDLGELLHGEAGLFEAVTPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVRKIGELRSEQDTA*
Ga0137392_115778812	3300011269	Vadose Zone Soil	FSGVTQLINKLLTEGRNWGRKQVSKMLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPLSEYSTRKGAAHTWRVRKIGELRSEQETA*
Ga0137391_105281811	3300011270	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYSGRKGQAQTWRVRKIGELRAEQETA*
Ga0137391_110103171	3300011270	Vadose Zone Soil	MLVIRIFLEVRNWGGKLVSEMLKVNETVTGYDLGEILHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGESRKANALTWRVRKIGELRSEQDTA*
Ga0137393_106631942	3300011271	Vadose Zone Soil	MEARNWGRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA*
Ga0137393_107681323	3300011271	Vadose Zone Soil	MLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPFSEFSTRKGAAHTWRVRKIGELRSEQETA*
Ga0137389_102859322	3300012096	Vadose Zone Soil	MLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPLSEYSTRKGAAHTWRVRKIGELRSEQETA*
Ga0137389_102859324	3300012096	Vadose Zone Soil	LGVITLINRLLEEGGNWGRKQVSNMLKVNETVTGYELGELLNGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYSGRKGQAQTWRVRKIGELRAEQETA*
Ga0137388_105299001	3300012189	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYGGRKGQAQTWRVRKIGELRAEQETA*
Ga0137388_115565021	3300012189	Vadose Zone Soil	GRKLVSEMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKANALTWRVRKIGELRSEQDTA*
Ga0137383_104012932	3300012199	Vadose Zone Soil	MLRVNETITGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137383_108474491	3300012199	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGVDKFQCVARSGHSITNLRPINESRKQNNQTWRVRKI
Ga0137382_104328282	3300012200	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPINESKKQNVQTWRVRKIGELR
Ga0137365_102453011	3300012201	Vadose Zone Soil	GRKQVREMLKVNETVTGYDLGELLNGEAGLFEAIAPGGDKFQCVARAGHSITNLRPINESKKQNNQTWRVRKIGELRSEQDTA*
Ga0137365_103073851	3300012201	Vadose Zone Soil	MKSGGRKQVREMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPINESRKQSNQTWRVRKIGELRSEQETA*
Ga0137363_105326991	3300012202	Vadose Zone Soil	LINKWLTEGRNWGRKQVSKMLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPLSEYSTRKGAAHTWRVRKIGELRSEQETA*
Ga0137363_107737092	3300012202	Vadose Zone Soil	MLKVNESVTGYDLGEILHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKANAQTWRVRKIG
Ga0137363_109749941	3300012202	Vadose Zone Soil	MENFLEVRNWGRKWVSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDTA*
Ga0137363_113554681	3300012202	Vadose Zone Soil	NFLEVKNWGRKQVNKMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0137374_110991612	3300012204	Vadose Zone Soil	MLKVNETITGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPISESRKQNNQTWRVRKIGELRSEQDTA*
Ga0137362_101893281	3300012205	Vadose Zone Soil	MEARNWGRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137362_102068152	3300012205	Vadose Zone Soil	MLINRLLMEGRNWGRKQVSNMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYSGRKGQAQTWRVRKIGELRAEQETA*
Ga0137380_103468811	3300012206	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKAIALTWRVRKIGELRSEQDTA*
Ga0137380_113970741	3300012206	Vadose Zone Soil	MEARNWGRKKVSQMLRVNETITGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137380_117180591	3300012206	Vadose Zone Soil	LEGRNWGRKWVSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDTA*
Ga0137376_102225503	3300012208	Vadose Zone Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCVARSGHSITNLRPISESRKQNNQTWRVRKIGELRSEQETA*
Ga0137376_102580692	3300012208	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPINESRKQNNQTWRVRKIGELRSEQDTA*
Ga0137376_102725383	3300012208	Vadose Zone Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPSGDKFQCVARAGHSITNLRPISESKKQNNPTWRVRKIGELRSEQDTA*
Ga0137379_102043232	3300012209	Vadose Zone Soil	KVSQMLRVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137379_104853131	3300012209	Vadose Zone Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESKKQNNPTWRVRKIGELRSEQETA*
Ga0137379_107959592	3300012209	Vadose Zone Soil	MEARNWGRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA
Ga0137378_101707023	3300012210	Vadose Zone Soil	MLKVNETVTGYDLGEILHGEAGLFEAVSPGGDKFQCVARAGHSITNLRPLGESRKANALTWRVRKIGELRSEQDTA*
Ga0137378_113289141	3300012210	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGEFRKSNALTWRVRKIGELRSEQDTA*
Ga0137387_100720642	3300012349	Vadose Zone Soil	MNPVGESQVSQMLKVNETVSGYDLGELLHGEAVLFEAVAPGGDKFQCVARAGHSITNLRPISETRKQGNQTWRVRKIGELRSEQDTA*
Ga0137387_109303372	3300012349	Vadose Zone Soil	VSQMLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137372_107288332	3300012350	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKQSALTWRVRKIGELRSEQETA*
Ga0137372_109419662	3300012350	Vadose Zone Soil	MKSGGRKQVREMLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNNQTWRVRKIGELRSEQETA
Ga0137386_100493785	3300012351	Vadose Zone Soil	VSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDTA*
Ga0137366_105081232	3300012354	Vadose Zone Soil	VRKMLKVNETVTGYDLGELLNGEAGLFEAVAPSGDKFQCISRAGHSITNLRPIGESKKQNTQTWRVRKIGELRSEQDTA*
Ga0137366_105278691	3300012354	Vadose Zone Soil	KMLKVNETVTGYDLGELLNGEAGLFEAIAPSGDKFQCVARAGHSITNLRPISESKKQNNPTWRVRKIGELRSEQDTA*
Ga0137384_114343671	3300012357	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGETRKSNALTWRVRKI
Ga0137385_110045401	3300012359	Vadose Zone Soil	GEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGEYSNRKGSAQTWRVLKIGELRSEQETA
Ga0137360_102482802	3300012361	Vadose Zone Soil	MLGSSDSHERLTMEARNWGRKLVSQMLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137360_110035561	3300012361	Vadose Zone Soil	MEVFLEVRNWGRKWVSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDTA*
Ga0137360_117904252	3300012361	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQDTA*
Ga0137361_107393771	3300012362	Vadose Zone Soil	MLKVNETVTGYDLGEILHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGESRKANALTWRVRKIGELRSEQDTA*
Ga0137361_111419911	3300012362	Vadose Zone Soil	VSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESMKQNAHTLRVRKICELCSEQYTA*
Ga0137361_111851201	3300012362	Vadose Zone Soil	MEVFLEVRNWGRKWVSNVLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESRKQNAQTWRVRKIGELRSEQDT
Ga0137361_112414231	3300012362	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARTGHSITNLRPLGESRKANALTWRVRKIGELRSEQDTA*
Ga0137361_116952691	3300012362	Vadose Zone Soil	VEAFFPPSENVREVNETRGRKQVREMLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCVARAGHSITNLRPISESKKQNNPTWRVRKIGELRSEQDTA*
Ga0137390_107276932	3300012363	Vadose Zone Soil	LGVITLINRLLEEGGNWGRKQVSNMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPLSEYSTRKGAA
Ga0134051_12127492	3300012398	Grasslands Soil	ETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137358_104819312	3300012582	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFLCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0137358_105191841	3300012582	Vadose Zone Soil	MLKVNESVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLSEYSNRKGAAQTWRVRKIGELRSEQDTA*
Ga0137398_105674642	3300012683	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLGETRKSNALTWRVRKIGELRSEQDTA*
Ga0137395_104608891	3300012917	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGETRKSNALTWRVRKIGELRSEQDTA*
Ga0137359_102776111	3300012923	Vadose Zone Soil	MEGRNWGRKQVSNMLKVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYSGRKGQAQTWRVRKIGELRAEQETA*
Ga0137359_102776113	3300012923	Vadose Zone Soil	MLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITKLRPVSEYSTRKGAAHTWRVRKIGELRSEQETA*
Ga0137359_106659912	3300012923	Vadose Zone Soil	WGRKLVSQMLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137404_119410141	3300012929	Vadose Zone Soil	GRKQVNKMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0137407_119710711	3300012930	Vadose Zone Soil	ARNWGRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSNRKGSAQTWRVRKIGELRSEQETA*
Ga0137410_108972011	3300012944	Vadose Zone Soil	KTGGRKQVNKMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0137405_10721991	3300015053	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0137418_104666561	3300015241	Vadose Zone Soil	SEVVTLINKLTMEARNWGRKLVSQMLRVNETVSGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPIGEFSSRKGSAQTWRVRKIGELRSEQETA*
Ga0137409_104168661	3300015245	Vadose Zone Soil	VNEMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA*
Ga0182033_103127901	3300016319	Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPISESRKQNSQTWRVRKIGELRSEQDTA
Ga0184618_103506691	3300018071	Groundwater Sediment	MLKVNETVTGYDLGELLNGEAGLFEAVAPSGDKFQCVARAGHSITNLRPISESKKQNIQTWRVRKIGELRSEQDTA
Ga0066662_108283952	3300018468	Grasslands Soil	MLRVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPLGEYSNRKGSAQTWRVRKIGELRSEQETA
Ga0066669_103788592	3300018482	Grasslands Soil	MLRVNETVTGYDLGELLHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPVGEYSNRKGSAQTWRVRKIGELRSEQETA
Ga0137408_12837241	3300019789	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEASLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA
Ga0179592_102295991	3300020199	Vadose Zone Soil	MLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESRKQANQTWRVRKIGELRSEQETA
Ga0179592_103575681	3300020199	Vadose Zone Soil	VNEMLKVNETVTGYDLGELLHGEAGLFEAVAPGGDKFQCVARAGHSITNLRPIGESRKQSTQTWRVRKIGELRSEQETA
Ga0193719_104006412	3300021344	Soil	MLKVNETVTGYDLGELLNGEAGLFEAVAPGGDKFQCVARAGHSITNLRPINESKKQNNQTWRVRKIGELRSEQDTA
Ga0193699_104893981	3300021363	Soil	LSWEVNETRGRKQVKEMLKVNETVTGYDLGELLNGEAGLFEAVAPSGDKFQCVARAGHSITNLRPISESKKQNIQTWRVRKIGELRSEQDTA
Ga0207670_100342822	3300025936	Switchgrass Rhizosphere	MLKVNETVTGYDLGELLHGEAGLFEAVTPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVRKIGELRSEQDTA
Ga0207641_104952922	3300026088	Switchgrass Rhizosphere	MLKVNETVTGYDLGELLHGEAGLFEAITPGGDKFQCVARAGHSITNLRPINESRKQSNQTWRVREIGELRSEQDTA
Ga0209648_105092451	3300026551	Grasslands Soil	LGELLSGEAGLFEAIAPGGDKFQCVARSGHSITNLRPLSEYSGRKGQAQTWRVRKIGELRAEQETA
Ga0179587_102650342	3300026557	Vadose Zone Soil	MLKVNESVTGYDLGEILHGEAGLFEAIAPGGDKFQCVARAGHSITNLRPLGESRKANAQTWRVRKIGELRSEQDTA
Ga0209166_102374162	3300027857	Surface Soil	MVRKMLKVNETITGYDLGELLHGEAGLFEAVAPGGDKFQCVARSGHSITNLRPIGESKKTANQTWRVRKIGELRSEQDTA
Ga0209701_104086532	3300027862	Vadose Zone Soil	MLRVNESVTGFDLGELLHGEAGLFEAIAPGGDKFQCVARAGQSITNLRPLSEYSTRKGAAHTWRVRKIGELRAEQETA

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083964

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences