Metagenome Family F083909

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083909
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	54 residues
Representative Sequence	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESV
Number of Associated Samples	86
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	99.10 %
% of genes near scaffold ends (potentially truncated)	97.32 %
% of genes from short scaffolds (< 2000 bps)	87.50 %
Associated GOLD sequencing projects	80
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.43

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (88.393 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil (48.214 % of family members)
Environment Ontology (ENVO)	Unclassified (46.429 % of family members)
Earth Microbiome Project Ontology (EMPO)	Host-associated → Plant → Plant rhizosphere (50.000 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	Yes	Secondary Structure distribution:	α-helix: 47.56% β-sheet: 0.00% Coil/Unstructured: 52.44%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.43
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.43
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF12704	MacB_PCD	15.18
PF04773	FecR	4.46
PF14534	DUF4440	3.57
PF07676	PD40	2.68
PF14821	Thr_synth_N	1.79
PF03712	Cu2_monoox_C	0.89
PF13624	SurA_N_3	0.89
PF06723	MreB_Mbl	0.89
PF13616	Rotamase_3	0.89
PF00474	SSF	0.89
PF08327	AHSA1	0.89
PF09118	GO-like_E_set	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1077	Cell shape-determining ATPase MreB, actin-like superfamily	Cell cycle control, cell division, chromosome partitioning [D]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	88.39 %
Unclassified	root	N/A	11.61 %

Name	Rank	Taxonomy	Distribution
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	83.04 %
Unclassified	root	N/A	11.61 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	18.75 %
Unclassified	root	N/A	11.61 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	6.25 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	8.04 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	6.25 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.89 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	8.04 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6.25 %
unclassified Deltaproteobacteria	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria	0.89 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	8.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1.79 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	11.61 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Acidobacteria bacterium 13_1_40CM_4_58_4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	8.04 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	1.79 %
Edaphobacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	0.89 %
Deltaproteobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	0.89 %
Acidobacteria bacterium 13_1_40CM_4_57_6	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000893\|AP72_2010_repI_A001DRAFT_1058903	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Edaphobacter	603	Open in IMG/M
3300001593\|JGI12635J15846_10029901	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	4368	Open in IMG/M
3300002917\|JGI25616J43925_10028798	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2461	Open in IMG/M
3300005174\|Ga0066680_10488266	All Organisms → cellular organisms → Bacteria → Acidobacteria	775	Open in IMG/M
3300005179\|Ga0066684_10595480	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	742	Open in IMG/M
3300005184\|Ga0066671_10056530	All Organisms → cellular organisms → Bacteria → Acidobacteria	2011	Open in IMG/M
3300005437\|Ga0070710_10504203	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	829	Open in IMG/M
3300005545\|Ga0070695_101548199	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	552	Open in IMG/M
3300005554\|Ga0066661_10883876	All Organisms → cellular organisms → Bacteria → Acidobacteria	523	Open in IMG/M
3300006086\|Ga0075019_10431425	All Organisms → cellular organisms → Bacteria → Acidobacteria	810	Open in IMG/M
3300006804\|Ga0079221_10224261	All Organisms → cellular organisms → Bacteria → Acidobacteria	1048	Open in IMG/M
3300007258\|Ga0099793_10024615	All Organisms → cellular organisms → Bacteria → Acidobacteria	2506	Open in IMG/M
3300007258\|Ga0099793_10375738	All Organisms → cellular organisms → Bacteria	697	Open in IMG/M
3300007788\|Ga0099795_10179565	Not Available	883	Open in IMG/M
3300009088\|Ga0099830_11161868	All Organisms → cellular organisms → Bacteria → Acidobacteria	640	Open in IMG/M
3300009143\|Ga0099792_10402861	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	838	Open in IMG/M
3300010337\|Ga0134062_10137032	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300010358\|Ga0126370_10226639	All Organisms → cellular organisms → Bacteria → Acidobacteria	1432	Open in IMG/M
3300010358\|Ga0126370_10444557	All Organisms → cellular organisms → Bacteria → Acidobacteria	1079	Open in IMG/M
3300010358\|Ga0126370_10727171	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	876	Open in IMG/M
3300010360\|Ga0126372_12145146	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	607	Open in IMG/M
3300010361\|Ga0126378_11103669	All Organisms → cellular organisms → Bacteria → Acidobacteria	894	Open in IMG/M
3300010361\|Ga0126378_11668160	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	724	Open in IMG/M
3300010361\|Ga0126378_12465476	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	594	Open in IMG/M
3300010366\|Ga0126379_13065317	All Organisms → cellular organisms → Bacteria → Acidobacteria	559	Open in IMG/M
3300011269\|Ga0137392_10127275	All Organisms → cellular organisms → Bacteria → Acidobacteria	2038	Open in IMG/M
3300011269\|Ga0137392_10330604	All Organisms → cellular organisms → Bacteria → Acidobacteria	1262	Open in IMG/M
3300011269\|Ga0137392_10667180	All Organisms → cellular organisms → Bacteria → Acidobacteria	861	Open in IMG/M
3300011270\|Ga0137391_10204075	All Organisms → cellular organisms → Bacteria → Acidobacteria	1719	Open in IMG/M
3300011270\|Ga0137391_10700823	All Organisms → cellular organisms → Bacteria → Acidobacteria	841	Open in IMG/M
3300011271\|Ga0137393_10145954	All Organisms → cellular organisms → Bacteria → Acidobacteria	1971	Open in IMG/M
3300011271\|Ga0137393_10887647	All Organisms → cellular organisms → Bacteria → Acidobacteria	761	Open in IMG/M
3300012096\|Ga0137389_10002378	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	11431	Open in IMG/M
3300012096\|Ga0137389_10399782	All Organisms → cellular organisms → Bacteria → Acidobacteria	1173	Open in IMG/M
3300012096\|Ga0137389_11495550	Not Available	571	Open in IMG/M
3300012189\|Ga0137388_10152300	All Organisms → cellular organisms → Bacteria	2049	Open in IMG/M
3300012189\|Ga0137388_10432858	All Organisms → cellular organisms → Bacteria → Acidobacteria	1219	Open in IMG/M
3300012189\|Ga0137388_10479957	All Organisms → cellular organisms → Bacteria → Acidobacteria	1154	Open in IMG/M
3300012189\|Ga0137388_11569916	All Organisms → cellular organisms → Bacteria → Acidobacteria	594	Open in IMG/M
3300012198\|Ga0137364_10637691	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → unclassified Deltaproteobacteria → Deltaproteobacteria bacterium	803	Open in IMG/M
3300012202\|Ga0137363_10125154	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1988	Open in IMG/M
3300012202\|Ga0137363_10211250	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1561	Open in IMG/M
3300012202\|Ga0137363_10356647	All Organisms → cellular organisms → Bacteria → Acidobacteria	1211	Open in IMG/M
3300012205\|Ga0137362_10297456	All Organisms → cellular organisms → Bacteria → Acidobacteria	1397	Open in IMG/M
3300012206\|Ga0137380_10063683	All Organisms → cellular organisms → Bacteria → Acidobacteria	3374	Open in IMG/M
3300012207\|Ga0137381_11256250	All Organisms → cellular organisms → Bacteria → Acidobacteria	634	Open in IMG/M
3300012209\|Ga0137379_10364317	All Organisms → cellular organisms → Bacteria → Acidobacteria	1355	Open in IMG/M
3300012349\|Ga0137387_10511736	All Organisms → cellular organisms → Bacteria → Acidobacteria	871	Open in IMG/M
3300012351\|Ga0137386_11139684	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012357\|Ga0137384_11570118	All Organisms → cellular organisms → Bacteria → Acidobacteria	508	Open in IMG/M
3300012362\|Ga0137361_10949603	All Organisms → cellular organisms → Bacteria → Acidobacteria	778	Open in IMG/M
3300012362\|Ga0137361_11703541	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	550	Open in IMG/M
3300012363\|Ga0137390_10036638	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4708	Open in IMG/M
3300012363\|Ga0137390_11604372	All Organisms → cellular organisms → Bacteria → Acidobacteria	588	Open in IMG/M
3300012363\|Ga0137390_11773349	All Organisms → cellular organisms → Bacteria → Acidobacteria	549	Open in IMG/M
3300012683\|Ga0137398_10303222	All Organisms → cellular organisms → Bacteria → Acidobacteria	1074	Open in IMG/M
3300012685\|Ga0137397_10639082	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	791	Open in IMG/M
3300012922\|Ga0137394_11033746	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	682	Open in IMG/M
3300012923\|Ga0137359_10722834	Not Available	867	Open in IMG/M
3300012924\|Ga0137413_11027405	All Organisms → cellular organisms → Bacteria → Acidobacteria	648	Open in IMG/M
3300012927\|Ga0137416_10021046	All Organisms → cellular organisms → Bacteria	4171	Open in IMG/M
3300012927\|Ga0137416_11936997	Not Available	540	Open in IMG/M
3300012929\|Ga0137404_10818918	All Organisms → cellular organisms → Bacteria → Acidobacteria	846	Open in IMG/M
3300012944\|Ga0137410_10141802	All Organisms → cellular organisms → Bacteria → Acidobacteria	1822	Open in IMG/M
3300014154\|Ga0134075_10077779	All Organisms → cellular organisms → Bacteria → Acidobacteria	1391	Open in IMG/M
3300015359\|Ga0134085_10134368	All Organisms → cellular organisms → Bacteria → Acidobacteria	1043	Open in IMG/M
3300016445\|Ga0182038_11096868	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	707	Open in IMG/M
3300017924\|Ga0187820_1189275	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	637	Open in IMG/M
3300017955\|Ga0187817_11027371	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	528	Open in IMG/M
3300017972\|Ga0187781_10366323	All Organisms → cellular organisms → Bacteria → Acidobacteria	1027	Open in IMG/M
3300019887\|Ga0193729_1000162	All Organisms → cellular organisms → Bacteria → Acidobacteria	32383	Open in IMG/M
3300020170\|Ga0179594_10198633	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	751	Open in IMG/M
3300020199\|Ga0179592_10400326	Not Available	599	Open in IMG/M
3300020579\|Ga0210407_10191722	All Organisms → cellular organisms → Bacteria → Acidobacteria	1586	Open in IMG/M
3300020581\|Ga0210399_10881099	All Organisms → cellular organisms → Bacteria → Acidobacteria	727	Open in IMG/M
3300021046\|Ga0215015_11092196	All Organisms → cellular organisms → Bacteria → Acidobacteria	766	Open in IMG/M
3300021560\|Ga0126371_12223024	All Organisms → cellular organisms → Bacteria → Acidobacteria	662	Open in IMG/M
3300024330\|Ga0137417_1286938	All Organisms → cellular organisms → Bacteria → Acidobacteria	2717	Open in IMG/M
3300024330\|Ga0137417_1346897	All Organisms → cellular organisms → Bacteria → Acidobacteria	603	Open in IMG/M
3300024347\|Ga0179591_1090511	All Organisms → cellular organisms → Bacteria → Acidobacteria	1834	Open in IMG/M
3300025625\|Ga0208219_1127374	Not Available	565	Open in IMG/M
3300026296\|Ga0209235_1210209	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_58_4	649	Open in IMG/M
3300026310\|Ga0209239_1169847	All Organisms → cellular organisms → Bacteria → Acidobacteria	837	Open in IMG/M
3300026312\|Ga0209153_1284254	All Organisms → cellular organisms → Bacteria → Acidobacteria	528	Open in IMG/M
3300026331\|Ga0209267_1062310	All Organisms → cellular organisms → Bacteria → Acidobacteria	1651	Open in IMG/M
3300026361\|Ga0257176_1087409	Not Available	511	Open in IMG/M
3300026532\|Ga0209160_1263013	Not Available	586	Open in IMG/M
3300026538\|Ga0209056_10603009	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	554	Open in IMG/M
3300026538\|Ga0209056_10732675	All Organisms → cellular organisms → Bacteria → Acidobacteria	501	Open in IMG/M
3300026542\|Ga0209805_1219142	All Organisms → cellular organisms → Bacteria → Acidobacteria	800	Open in IMG/M
3300026552\|Ga0209577_10851484	All Organisms → cellular organisms → Bacteria → Acidobacteria	510	Open in IMG/M
3300026557\|Ga0179587_10288559	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium 13_1_40CM_4_57_6	1055	Open in IMG/M
3300027587\|Ga0209220_1008807	All Organisms → cellular organisms → Bacteria → Acidobacteria	2697	Open in IMG/M
3300027587\|Ga0209220_1097259	All Organisms → cellular organisms → Bacteria → Acidobacteria	773	Open in IMG/M
3300027643\|Ga0209076_1019679	All Organisms → cellular organisms → Bacteria → Acidobacteria	1825	Open in IMG/M
3300027667\|Ga0209009_1054556	All Organisms → cellular organisms → Bacteria → Acidobacteria	1000	Open in IMG/M
3300027748\|Ga0209689_1183011	All Organisms → cellular organisms → Bacteria → Acidobacteria	945	Open in IMG/M
3300027787\|Ga0209074_10484725	Not Available	534	Open in IMG/M
3300027862\|Ga0209701_10089002	All Organisms → cellular organisms → Bacteria	1939	Open in IMG/M
3300027862\|Ga0209701_10427613	All Organisms → cellular organisms → Bacteria → Acidobacteria	733	Open in IMG/M
3300027875\|Ga0209283_10627599	All Organisms → cellular organisms → Bacteria → Acidobacteria	678	Open in IMG/M
3300027898\|Ga0209067_10491537	Not Available	696	Open in IMG/M
3300031720\|Ga0307469_10254033	All Organisms → cellular organisms → Bacteria → Acidobacteria	1417	Open in IMG/M
3300031753\|Ga0307477_11058510	All Organisms → cellular organisms → Bacteria	530	Open in IMG/M
3300031754\|Ga0307475_10367319	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1156	Open in IMG/M
3300031754\|Ga0307475_11077537	All Organisms → cellular organisms → Bacteria → Acidobacteria	629	Open in IMG/M
3300031796\|Ga0318576_10155757	All Organisms → cellular organisms → Bacteria → Acidobacteria	1066	Open in IMG/M
3300031823\|Ga0307478_10714342	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	839	Open in IMG/M
3300031962\|Ga0307479_10605759	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1077	Open in IMG/M
3300031962\|Ga0307479_11896379	Not Available	546	Open in IMG/M
3300032205\|Ga0307472_100765523	Not Available	877	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	96.43%
Aquatic	Environmental → Aquatic	3.57%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	96.43%
Freshwater	Environmental → Aquatic → Freshwater	1.79%
Sediment	Environmental → Aquatic → Sediment	1.79%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	90.18%
Loam	Environmental → Terrestrial → Soil → Loam	5.36%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	1.79%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	61.61%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	13.39%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	12.50%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	3.57%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.79%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	1.79%
Agricultural Land	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	48.21%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	10.71%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	8.04%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	7.14%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	3.57%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	3.57%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	2.68%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	2.68%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.79%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	1.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000893	Forest soil microbial communities from Amazon forest - Pasture72 2010 replicate I A001	Environmental	Open in IMG/M
3300001593	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M2	Environmental	Open in IMG/M
3300002917	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 9_17_2013_100cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005184	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120	Environmental	Open in IMG/M
3300005437	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG	Environmental	Open in IMG/M
3300005545	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-2 metaG	Environmental	Open in IMG/M
3300005554	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006804	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007788	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_2	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009143	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2	Environmental	Open in IMG/M
3300010337	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09082015	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300011269	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4A metaG	Environmental	Open in IMG/M
3300011270	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4B metaG	Environmental	Open in IMG/M
3300011271	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h3.4B metaG	Environmental	Open in IMG/M
3300012096	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4B metaG	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012202	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_115_16 metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012206	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_100_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300012209	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_80_16 metaG	Environmental	Open in IMG/M
3300012349	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Sage2_R_115_16 metaG	Environmental	Open in IMG/M
3300012351	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_100_16 metaG	Environmental	Open in IMG/M
3300012357	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG	Environmental	Open in IMG/M
3300012362	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_80_16 metaG	Environmental	Open in IMG/M
3300012363	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaG	Environmental	Open in IMG/M
3300012683	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz2.16 metaG	Environmental	Open in IMG/M
3300012685	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czorhiz1.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012923	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_40_16 metaG	Environmental	Open in IMG/M
3300012924	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012929	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014154	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09212015	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017955	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_2	Environmental	Open in IMG/M
3300017972	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0715_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300019887	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? U1c2	Environmental	Open in IMG/M
3300020170	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad1_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020199	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020581	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-M	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300024330	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300024347	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16fungal (PacBio error correction)	Environmental	Open in IMG/M
3300025625	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-2 shallow-072012 (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026310	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_2_20cm (SPAdes)	Environmental	Open in IMG/M
3300026312	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_120 (SPAdes)	Environmental	Open in IMG/M
3300026331	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137 (SPAdes)	Environmental	Open in IMG/M
3300026361	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NL-03-B	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300026557	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug2_1_08_16fungal	Environmental	Open in IMG/M
3300027587	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M3 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027667	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM3_M2 (SPAdes)	Environmental	Open in IMG/M
3300027748	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_149 (SPAdes)	Environmental	Open in IMG/M
3300027787	Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Plitter (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027862	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027875	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027898	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013 (SPAdes)	Environmental	Open in IMG/M
3300031720	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031796	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24	Environmental	Open in IMG/M
3300031823	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_05	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
AP72_2010_repI_A001DRAFT_10589032	3300000893	Forest Soil	MAVLDNRKTGMRILLGIVVLLVGGSMLLYLVPQSPTTGEASSTDTVAKVGDETVSTAEVRQQMAEIQQ
JGI12635J15846_100299011	3300001593	Forest Soil	MAGDSDNRKLGYRIFLGVVVLVLGGSMLLYLVPQTPGTGEAATDTVAKVGD
JGI25616J43925_100287981	3300002917	Grasslands Soil	MAVAKDSRKTGLRIXLGAVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDETV
Ga0066680_104882662	3300005174	Soil	MAGSANEKSKLGYRIFLGAVVLALGGSMLLYLVPQGPATGSGALSSDTVAKIG
Ga0066684_105954801	3300005179	Soil	MAGSEKDRSKLGKRIFLGAAVLVLGGSMLLYLVPQGPATGEVSTDTVAKVG
Ga0066671_100565301	3300005184	Soil	MAGAKDTSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSVQD
Ga0070710_105042032	3300005437	Corn, Switchgrass And Miscanthus Rhizosphere	MAVAQDSRKTGVRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTDTLARVGDETVSTAE
Ga0070695_1015481991	3300005545	Corn, Switchgrass And Miscanthus Rhizosphere	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVG
Ga0066661_108838761	3300005554	Soil	MVGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTLAK
Ga0075019_104314251	3300006086	Watersheds	MAVAKDKTKRGYRILLGVFVLILGGSMLLYLVPQSTSTGEVSTDTVAKVGDTN
Ga0079221_102242612	3300006804	Agricultural Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSVQDVR
Ga0099793_100246151	3300007258	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESVSVQDVR
Ga0099793_103757381	3300007258	Vadose Zone Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDTVAKVGDETVSTAE
Ga0099795_101795651	3300007788	Vadose Zone Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDETVSAA
Ga0099830_111618682	3300009088	Vadose Zone Soil	MAVAKDSRKTGVRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTDIVAKVGS
Ga0099792_104028612	3300009143	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDSVAKIG
Ga0134062_101370322	3300010337	Grasslands Soil	MAGADKSKLGYRILLGVVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSV
Ga0126370_102266392	3300010358	Tropical Forest Soil	MAGSANNQKLGYRIFLGIAVLILGGSMLLYLVPQGPATGGGGLSSDTVAKIGDE
Ga0126370_104445571	3300010358	Tropical Forest Soil	MNGAKDKSKRGYRILLGAFMLVLGGSMLLYLVPQAPTTGEGSTDTVAKVGDESVTVQD
Ga0126370_107271713	3300010358	Tropical Forest Soil	MLSLSNDLGDHRMAGSASDKSKLGYRILLGAVVLALGGSMLLYLVPQGPATGSGALSSDTVAK
Ga0126372_121451461	3300010360	Tropical Forest Soil	MAGAKDNSTLMKRIMFGAAGVLLGGSMLLYLVPQGPATGEVSTDTVAK
Ga0126378_111036693	3300010361	Tropical Forest Soil	MAGAKDNSTLMKRIMFGAAGVLLGGSMLLYLVPQGPATGEVSTDTVAKVGDESITVND
Ga0126378_116681601	3300010361	Tropical Forest Soil	MAGAKDKSTLMKRILFGVAGVVLGGSMLLYLVPQGPATGEVSTDTVAK
Ga0126378_124654762	3300010361	Tropical Forest Soil	MAGARDRSTLTKRILFGVAGVVLGGSMLLYLVPQGPATGEVSTDTVAKVGDESITVND
Ga0126379_130653172	3300010366	Tropical Forest Soil	MAVAKDKTKLGYRILLGAVVLVLGGSMLLYLVPQAPTTGEVSTDTVA
Ga0137392_101272753	3300011269	Vadose Zone Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGETSTDTVAKIGDESVSVQDVK
Ga0137392_103306041	3300011269	Vadose Zone Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESVS
Ga0137392_106671801	3300011269	Vadose Zone Soil	MAVAKDSRKTGLRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTDIIAK
Ga0137391_102040751	3300011270	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDES
Ga0137391_107008231	3300011270	Vadose Zone Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDTIAKVG
Ga0137393_101459541	3300011271	Vadose Zone Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESV
Ga0137393_108876472	3300011271	Vadose Zone Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDTIAKVGDQTVS
Ga0137389_100023781	3300012096	Vadose Zone Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTLAKVGDESVSVQDVR
Ga0137389_103997822	3300012096	Vadose Zone Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDTVAKVGDETVS
Ga0137389_114955501	3300012096	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDTVAKIGDQS
Ga0137388_101523004	3300012189	Vadose Zone Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDTVAKVGDETVSTAEV
Ga0137388_104328581	3300012189	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDTVAKI
Ga0137388_104799572	3300012189	Vadose Zone Soil	MVGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTLAKIGDESVSVQDVR
Ga0137388_115699161	3300012189	Vadose Zone Soil	MVDAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTLAKIGDESVS
Ga0137364_106376912	3300012198	Vadose Zone Soil	MAGAKDKSKLGYRILLGVVVLVLGGSMLLYLVPQSPVSGEISTETVAKIGDESVSVQDV
Ga0137363_101251541	3300012202	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDTVAKIGDQSV
Ga0137363_102112501	3300012202	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDTVAKIGDQSVS
Ga0137363_103566471	3300012202	Vadose Zone Soil	MVDAKDKSKTGYRILLGAFVLVLGGSMLLYLVPQSPVSGEISNDTLAKIGDESVSV
Ga0137362_102974562	3300012205	Vadose Zone Soil	MAVAKDSRKTGMRILLGVVVLLLGGSILLYLVPQTPGTGEASSTDIVAKVGDETV
Ga0137380_100636833	3300012206	Vadose Zone Soil	MAGAKDTSKLGYRILLGAFVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGD*
Ga0137381_112562501	3300012207	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTLAKIGDESV
Ga0137379_103643172	3300012209	Vadose Zone Soil	MAGAKDKSKLGYRILLGVVVLVLGGSMLLYLVPQSPVSGEISTETVAKI
Ga0137387_105117363	3300012349	Vadose Zone Soil	MAGANDKSKRGYRILLGAFVVVLGGSMLLYLVPQSPTTGEVSTDTVAKVGDESVTLQDV
Ga0137386_111396841	3300012351	Vadose Zone Soil	MAGANDKSKRGYRILLGAFVVVLGGSMLLYLVPQSPTTGEVSTDTVAKV
Ga0137384_115701181	3300012357	Vadose Zone Soil	MAGANDKSKRGYRILLGAFVVVLGGSMLLYLVPQSPTTGEVSTDTVAKVGDESVSLQDV
Ga0137361_109496032	3300012362	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESVS
Ga0137361_117035411	3300012362	Vadose Zone Soil	MAGAKDTSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGD
Ga0137390_100366381	3300012363	Vadose Zone Soil	MVGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEIATDTVAK
Ga0137390_116043721	3300012363	Vadose Zone Soil	MVDAKDKSKTGYRILLGAFVLVLGGSMLLYLVPQSPVSGEISNDTLAKI
Ga0137390_117733492	3300012363	Vadose Zone Soil	MAVAKDSRKTGLRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTDIIAKVGDETVS
Ga0137398_103032221	3300012683	Vadose Zone Soil	MAADNRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDTLAKV
Ga0137397_106390822	3300012685	Vadose Zone Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDE
Ga0137394_110337461	3300012922	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTTPGTGEASTDTVAKIGD
Ga0137359_107228341	3300012923	Vadose Zone Soil	MAVAKDSRKTSMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDETVS
Ga0137413_110274052	3300012924	Vadose Zone Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDET
Ga0137416_100210464	3300012927	Vadose Zone Soil	MAVAKDSRKTGLRILLGAVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDE
Ga0137416_119369971	3300012927	Vadose Zone Soil	MAGAKDRSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAK
Ga0137404_108189182	3300012929	Vadose Zone Soil	MAGVLDNRKTGTRILLGAVVLLLGGSMLLYLVPTNPGTGEISTDTVARIGDQSVS
Ga0137410_101418023	3300012944	Vadose Zone Soil	MAGAKDKSKLGYRILLGVVVLVLGGSMLLYLVPQSQVNGEVSTDTVAKVGDDSV
Ga0134075_100777793	3300014154	Grasslands Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTLAKIGDE
Ga0134085_101343682	3300015359	Grasslands Soil	MAGSEKDRSKLGKRIFLGAAVLVLGGSMLLYLVPQGPATGEVSTDTVETSPVAGPC
Ga0182038_110968681	3300016445	Soil	MAGARDRSTLTKRILFGVAGVVLGGSMLLYLVPQGPATGEVSTDTVAK
Ga0187820_11892752	3300017924	Freshwater Sediment	MAGADKSKLGYRILLGAVVMVLGGSMLLYLVPQTPGTSEVSTDTVAKVGDET
Ga0187817_110273712	3300017955	Freshwater Sediment	MAGADKSKLGYRILLGAVVMVLGGSMLLYLVPQTPGTSEVSTDTVAKVGDE
Ga0187781_103663232	3300017972	Tropical Peatland	MAGANDKSKRGYRILLGAFVLVLGGSMLLYLVPQGTTSGEVSTDTVA
Ga0193729_10001621	3300019887	Soil	MAGAKDTSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSVQDVR
Ga0179594_101986331	3300020170	Vadose Zone Soil	MVGAKDKSKLGYRIFLAIVVLVLGGSMLMYLVPQSPVGSEVSTDTLAKVGDESVSVQ
Ga0179592_104003261	3300020199	Vadose Zone Soil	MAGANEKSKRGYRIFLGIVVVALGGSMLLYLVPQSPVSGEISTDTVAKIGDESVSVQ
Ga0210407_101917221	3300020579	Soil	MAVFDNRKTGMRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTDVVAKVGDQTVSTAAVR
Ga0210399_108810992	3300020581	Soil	MAGAEKNKLGVRILLGGVVMLLGGSMLLYLVPQSPVGSEVSTDTVAK
Ga0215015_110921961	3300021046	Soil	MAVLDNRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDTLAK
Ga0126371_122230242	3300021560	Tropical Forest Soil	MAGSANDKSKLGYRILLGAVVLLLGGSMLLYLVPQGPATGGGGLSSDTIAKIGDQ
Ga0137417_12869381	3300024330	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESVSVQDCK
Ga0137417_13468971	3300024330	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESVSVQ
Ga0179591_10905112	3300024347	Vadose Zone Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDGDR
Ga0208219_11273742	3300025625	Arctic Peat Soil	MAGDSDNRKLGYRIFLGVVVLVLGGSMLLYLVPQTPGTGEAATDTVAKVGDQTVTLG
Ga0209235_12102091	3300026296	Grasslands Soil	MNGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQAPTSGEVSTDTVAKVGDESVSVQDIRKQ
Ga0209239_11698472	3300026310	Grasslands Soil	MAGAKDHSTLMKRILFGVAGVVLGGSMLLYLVPQGPATGEVSTDTVAKVGDESV
Ga0209153_12842541	3300026312	Soil	MAGNEQDKAKMAKRIFLGAGVLVLGGSMLLYLVPQGPATGGVSTDTVAK
Ga0209267_10623102	3300026331	Soil	MAGPKDRSKLMKRIFFGAAGILLGAGMLLYLVPQGPTTGEVPTDTVAKVGDESVTVQ
Ga0257176_10874091	3300026361	Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAK
Ga0209160_12630131	3300026532	Soil	MAGGNDKSKLGVRILLGAVVLLLGGSMLLYLVPQSPLGGEIPTDTVAR
Ga0209056_106030091	3300026538	Soil	MAGAKDNSTLMKRIMFGAAGVVLGGSMLLYLVPQGPATGEVSTDTVAKVGDESITVNDIRQQ
Ga0209056_107326751	3300026538	Soil	MAGANDKSKRGYRILLGAFVVVLGGSMLLYLVPQSPTTGEVSTDTVAKVGDESVTLQD
Ga0209805_12191421	3300026542	Soil	MAGAKDHSTLMKRILFGVAGVVLGGSMLLYLVPQGPATGEVSTDTVAKVGDESVTVNDIRQQ
Ga0209577_108514841	3300026552	Soil	MAGAKDTSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSV
Ga0179587_102885593	3300026557	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVA
Ga0209220_10088071	3300027587	Forest Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGD
Ga0209220_10972591	3300027587	Forest Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDQTVSAS
Ga0209076_10196794	3300027643	Vadose Zone Soil	MAGAKDKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEISTDTVAKIGDESV
Ga0209009_10545561	3300027667	Forest Soil	MAVAKDSRKTGLRILLGAVVLVLGGSMLLYLVPQSPGTGEASSTGIVAKVGDETVSTAE
Ga0209689_11830111	3300027748	Soil	MAGADKSKLGYRILLGVVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKIGDESVSVQD
Ga0209074_104847251	3300027787	Agricultural Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDETVSAAEV
Ga0209580_101781131	3300027842	Surface Soil	MAVDNRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDT
Ga0209701_100890023	3300027862	Vadose Zone Soil	MAVAKDSRKTGLRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTDTIAKVGDETVSTAEVRQ
Ga0209701_104276131	3300027862	Vadose Zone Soil	MAVAKDSRKTSMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDET
Ga0209283_106275991	3300027875	Vadose Zone Soil	MAVLDNRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDTLAKVGDL
Ga0209067_104915372	3300027898	Watersheds	MSGSIGNQKLGYRVLLGAVVVVLGGSMLLYLVPQTPGTAEVSTDTVAKVGDKSITVADIRKQL
Ga0307469_102540331	3300031720	Hardwood Forest Soil	MAGNNRKLGYRILLGAVVAALGGSMLLYLVPQAPGTGQEATDTLARVGDQTVTVADVRQQ
Ga0307477_110585101	3300031753	Hardwood Forest Soil	MAVLDNRKTGLRILLGVVVLVLGGSMLLYLVPQTPATGEASSTDTIAKVGDETISTAEVRQQLA
Ga0307475_103673191	3300031754	Hardwood Forest Soil	MAVLDNRKTGLRILLGVVVLVLGGSMLLYLVPQTPGTGEASSTDTIAKVGDETVSTAEV
Ga0307475_110775372	3300031754	Hardwood Forest Soil	MADSRKTGLRILLGAVVLVLGGSMLLYLVPQTPGTGEASSTGIVAK
Ga0318576_101557572	3300031796	Soil	MAGAKDNSTLMKRIMFGAAGVLLGGSMLLYLVPQGPATGEVS
Ga0307478_107143422	3300031823	Hardwood Forest Soil	MAVAKDSRKTSMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGD
Ga0307479_106057592	3300031962	Hardwood Forest Soil	MAVAKDSRKTGMRILLGVVVLLLGGSMLLYLVPQTPGTGEASSTDIVAKVGDQTVS
Ga0307479_118963791	3300031962	Hardwood Forest Soil	MAGADKSKLGYRILLGAVVLVLGGSMLLYLVPQSPVSGEVSTDTVAKVGDESVTV
Ga0307472_1007655232	3300032205	Hardwood Forest Soil	MAGAKDKSKLGYRILLGVVVLVLGGSMLLYLVPQSPVSGEISTDTVAQIGDESVSVQDVR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083909

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences