Metagenome / Metatranscriptome Family F083878

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083878
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	42 residues
Representative Sequence	MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY
Number of Associated Samples	70
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Viruses
% of genes with valid RBS motifs	7.14 %
% of genes near scaffold ends (potentially truncated)	33.93 %
% of genes from short scaffolds (< 2000 bps)	66.07 %
Associated GOLD sequencing projects	57
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.48

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Predicted Viral (45.536 % of family members)
NCBI Taxonomy ID	10239 (predicted)
Taxonomy	All Organisms → Viruses → Predicted Viral

Most Common Ecosystem
GOLD Ecosystem	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous (41.071 % of family members)
Environment Ontology (ENVO)	Unclassified (49.107 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Saline → Water (saline) (83.929 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 43.06% β-sheet: 0.00% Coil/Unstructured: 56.94%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.48
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.48
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08534	Redoxin	29.46
PF00504	Chloroa_b-bind	16.96
PF00111	Fer2	13.39
PF00124	Photo_RC	6.25
PF13098	Thioredoxin_2	6.25
PF00127	Copper-bind	5.36
PF03641	Lysine_decarbox	1.79
PF13529	Peptidase_C39_2	0.89
PF00535	Glycos_transf_2	0.89
PF00596	Aldolase_II	0.89
PF01755	Glyco_transf_25	0.89
PF04966	OprB	0.89
PF12322	T4_baseplate	0.89
PF13385	Laminin_G_3	0.89
PF00565	SNase	0.89
PF02709	Glyco_transf_7C	0.89
PF04820	Trp_halogenase	0.89
PF05996	Fe_bilin_red	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1611	Nucleotide monophosphate nucleosidase PpnN/YdgH, Lonely Guy (LOG) family	Nucleotide transport and metabolism [F]	1.79
COG3306	Glycosyltransferase involved in LPS biosynthesis, GR25 family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG3659	Carbohydrate-selective porin OprB	Cell wall/membrane/envelope biogenesis [M]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	73.21 %
Unclassified	root	N/A	26.79 %

Name	Rank	Taxonomy	Distribution
Viruses	superkingdom	All Organisms → Viruses	73.21 %
Unclassified	root	N/A	26.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Duplodnaviria	clade	All Organisms → Viruses → Duplodnaviria	15.18 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Heunggongvirae	kingdom	All Organisms → Viruses → Duplodnaviria → Heunggongvirae	15.18 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Uroviricota	phylum	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota	15.18 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Caudoviricetes	class	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes	15.18 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Caudovirales	order	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales	13.39 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Myoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	13.39 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.79 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Tevenvirinae	subfamily	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae	2.68 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.79 %
unclassified Myoviridae	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae	0.89 %
Cymopoleiavirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Cymopoleiavirus	0.89 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Tequatrovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	2.68 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.79 %
Synechococcus phage S-CBM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CBM2	0.89 %
unclassified Cymopoleiavirus	no rank	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Cymopoleiavirus → unclassified Cymopoleiavirus	0.89 %

Name	Rank	Taxonomy	Distribution
Predicted Viral	clade	All Organisms → Viruses → Predicted Viral	45.54 %
Unclassified	root	N/A	26.79 %
Tequatrovirus	genus	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	2.68 %
Kyanoviridae	family	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	1.79 %
Synechococcus phage S-RSM4	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Cymopoleiavirus → unclassified Cymopoleiavirus → Synechococcus phage S-RSM4	0.89 %
Synechococcus phage S-CBM2	species	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CBM2	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300000116\|DelMOSpr2010_c10000737	Not Available	20503	Open in IMG/M
3300000116\|DelMOSpr2010_c10264701	Not Available	517	Open in IMG/M
3300001213\|JGIcombinedJ13530_106688005	Not Available	506	Open in IMG/M
3300001830\|ACM40_1030902	Not Available	534	Open in IMG/M
3300005805\|Ga0079957_1085588	All Organisms → Viruses → Predicted Viral	1766	Open in IMG/M
3300005805\|Ga0079957_1241697	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	843	Open in IMG/M
3300006025\|Ga0075474_10017372	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	2650	Open in IMG/M
3300006026\|Ga0075478_10218674	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	578	Open in IMG/M
3300006810\|Ga0070754_10009740	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	6123	Open in IMG/M
3300006810\|Ga0070754_10138222	All Organisms → Viruses	1174	Open in IMG/M
3300006810\|Ga0070754_10152190	All Organisms → Viruses → Predicted Viral	1105	Open in IMG/M
3300006810\|Ga0070754_10156702	All Organisms → Viruses → Predicted Viral	1084	Open in IMG/M
3300006868\|Ga0075481_10218889	Not Available	677	Open in IMG/M
3300006869\|Ga0075477_10314880	Not Available	620	Open in IMG/M
3300006870\|Ga0075479_10172444	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	876	Open in IMG/M
3300006870\|Ga0075479_10382453	Not Available	545	Open in IMG/M
3300006874\|Ga0075475_10018822	All Organisms → Viruses → Predicted Viral	3410	Open in IMG/M
3300006916\|Ga0070750_10233081	All Organisms → Viruses	804	Open in IMG/M
3300006916\|Ga0070750_10434047	Not Available	545	Open in IMG/M
3300007538\|Ga0099851_1000173	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	25980	Open in IMG/M
3300007538\|Ga0099851_1009988	Not Available	3900	Open in IMG/M
3300007538\|Ga0099851_1017840	All Organisms → Viruses → Predicted Viral	2881	Open in IMG/M
3300007538\|Ga0099851_1269031	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	606	Open in IMG/M
3300007539\|Ga0099849_1078811	All Organisms → Viruses → Predicted Viral	1335	Open in IMG/M
3300007541\|Ga0099848_1009657	All Organisms → Viruses → Predicted Viral	4281	Open in IMG/M
3300007541\|Ga0099848_1010513	All Organisms → Viruses → Predicted Viral	4086	Open in IMG/M
3300007960\|Ga0099850_1121727	All Organisms → Viruses → Predicted Viral	1065	Open in IMG/M
3300009000\|Ga0102960_1011525	All Organisms → Viruses → Predicted Viral	3339	Open in IMG/M
3300009000\|Ga0102960_1015496	All Organisms → Viruses → Predicted Viral	2869	Open in IMG/M
3300009001\|Ga0102963_1012426	All Organisms → Viruses → Predicted Viral	3625	Open in IMG/M
3300009001\|Ga0102963_1019353	All Organisms → Viruses → Predicted Viral	2874	Open in IMG/M
3300009124\|Ga0118687_10003259	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Cymopoleiavirus → unclassified Cymopoleiavirus → Synechococcus phage S-RSM4	5728	Open in IMG/M
3300009124\|Ga0118687_10038285	All Organisms → Viruses → Predicted Viral	1587	Open in IMG/M
3300010296\|Ga0129348_1006884	All Organisms → Viruses → Predicted Viral	4150	Open in IMG/M
3300010296\|Ga0129348_1042315	All Organisms → Viruses → Predicted Viral	1650	Open in IMG/M
3300010296\|Ga0129348_1084800	All Organisms → Viruses	1124	Open in IMG/M
3300010296\|Ga0129348_1121955	Not Available	911	Open in IMG/M
3300010297\|Ga0129345_1008064	All Organisms → Viruses → Predicted Viral	4108	Open in IMG/M
3300010297\|Ga0129345_1062445	All Organisms → Viruses → Predicted Viral	1413	Open in IMG/M
3300010297\|Ga0129345_1343166	Not Available	514	Open in IMG/M
3300010299\|Ga0129342_1042631	All Organisms → Viruses → Predicted Viral	1799	Open in IMG/M
3300010299\|Ga0129342_1049895	All Organisms → Viruses	1644	Open in IMG/M
3300010299\|Ga0129342_1064913	All Organisms → Viruses → Predicted Viral	1408	Open in IMG/M
3300010299\|Ga0129342_1173934	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	775	Open in IMG/M
3300010300\|Ga0129351_1041663	All Organisms → Viruses → Predicted Viral	1890	Open in IMG/M
3300010318\|Ga0136656_1000442	All Organisms → Viruses	14457	Open in IMG/M
3300010354\|Ga0129333_10286553	All Organisms → Viruses → Predicted Viral	1476	Open in IMG/M
3300010354\|Ga0129333_10355803	All Organisms → Viruses → Predicted Viral	1302	Open in IMG/M
3300010354\|Ga0129333_11207380	Not Available	628	Open in IMG/M
3300010389\|Ga0136549_10011112	Not Available	6003	Open in IMG/M
3300011268\|Ga0151620_1006304	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	4352	Open in IMG/M
3300011268\|Ga0151620_1008358	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → unclassified Myoviridae → Synechococcus phage S-CBM2	3741	Open in IMG/M
3300012504\|Ga0129347_1019075	Not Available	890	Open in IMG/M
3300012504\|Ga0129347_1069133	All Organisms → Viruses	945	Open in IMG/M
3300012520\|Ga0129344_1024085	All Organisms → Viruses → Predicted Viral	1401	Open in IMG/M
3300012520\|Ga0129344_1257212	Not Available	626	Open in IMG/M
3300012528\|Ga0129352_10441880	All Organisms → Viruses	770	Open in IMG/M
3300012965\|Ga0129346_1060174	Not Available	992	Open in IMG/M
3300012966\|Ga0129341_1082164	Not Available	612	Open in IMG/M
3300012967\|Ga0129343_1036228	All Organisms → Viruses → Predicted Viral	2909	Open in IMG/M
3300012967\|Ga0129343_1114736	All Organisms → Viruses → Predicted Viral	1128	Open in IMG/M
3300012967\|Ga0129343_1164535	All Organisms → Viruses → Predicted Viral	1172	Open in IMG/M
3300017949\|Ga0181584_10218612	All Organisms → Viruses → Predicted Viral	1246	Open in IMG/M
3300017949\|Ga0181584_10309058	All Organisms → Viruses → Predicted Viral	1009	Open in IMG/M
3300017949\|Ga0181584_10454933	Not Available	794	Open in IMG/M
3300017952\|Ga0181583_10102127	All Organisms → Viruses → Predicted Viral	1960	Open in IMG/M
3300017952\|Ga0181583_10473329	All Organisms → Viruses	769	Open in IMG/M
3300017952\|Ga0181583_10838895	Not Available	538	Open in IMG/M
3300017956\|Ga0181580_10074708	All Organisms → Viruses → Predicted Viral	2520	Open in IMG/M
3300017958\|Ga0181582_10077952	All Organisms → Viruses → Predicted Viral	2433	Open in IMG/M
3300017962\|Ga0181581_10496331	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	755	Open in IMG/M
3300017964\|Ga0181589_10485440	Not Available	801	Open in IMG/M
3300017964\|Ga0181589_10938032	Not Available	529	Open in IMG/M
3300017967\|Ga0181590_10061856	All Organisms → Viruses → Predicted Viral	2975	Open in IMG/M
3300018421\|Ga0181592_10138762	All Organisms → Viruses → Predicted Viral	1863	Open in IMG/M
3300021335\|Ga0213867_1048442	All Organisms → Viruses → Predicted Viral	1632	Open in IMG/M
3300021425\|Ga0213866_10022982	Not Available	3689	Open in IMG/M
3300021958\|Ga0222718_10097910	All Organisms → Viruses → Predicted Viral	1735	Open in IMG/M
3300021959\|Ga0222716_10026257	All Organisms → Viruses → Predicted Viral	4285	Open in IMG/M
3300021959\|Ga0222716_10042730	All Organisms → Viruses → Predicted Viral	3248	Open in IMG/M
3300021959\|Ga0222716_10074659	All Organisms → Viruses → Predicted Viral	2344	Open in IMG/M
3300021960\|Ga0222715_10004036	All Organisms → Viruses	12922	Open in IMG/M
3300021960\|Ga0222715_10052496	All Organisms → Viruses → Predicted Viral	2805	Open in IMG/M
3300021960\|Ga0222715_10246358	All Organisms → Viruses → Predicted Viral	1042	Open in IMG/M
3300021961\|Ga0222714_10000512	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae → Tevenvirinae → Tequatrovirus	44119	Open in IMG/M
3300021961\|Ga0222714_10029346	All Organisms → Viruses → Predicted Viral	4123	Open in IMG/M
3300021964\|Ga0222719_10247493	All Organisms → Viruses → Predicted Viral	1187	Open in IMG/M
3300022057\|Ga0212025_1029821	Not Available	915	Open in IMG/M
3300022069\|Ga0212026_1056560	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	593	Open in IMG/M
3300022071\|Ga0212028_1067765	Not Available	668	Open in IMG/M
3300022187\|Ga0196899_1041932	All Organisms → Viruses → Predicted Viral	1544	Open in IMG/M
3300022187\|Ga0196899_1100034	Not Available	860	Open in IMG/M
3300022198\|Ga0196905_1003749	Not Available	5517	Open in IMG/M
3300022200\|Ga0196901_1058812	All Organisms → Viruses	1417	Open in IMG/M
3300022935\|Ga0255780_10010060	All Organisms → Viruses	7507	Open in IMG/M
3300022937\|Ga0255770_10043946	All Organisms → Viruses → Predicted Viral	2910	Open in IMG/M
3300023116\|Ga0255751_10326687	All Organisms → Viruses	789	Open in IMG/M
3300024289\|Ga0255147_1000224	Not Available	21089	Open in IMG/M
3300024570\|Ga0255276_1165707	All Organisms → Viruses	573	Open in IMG/M
3300025646\|Ga0208161_1009637	All Organisms → Viruses → Predicted Viral	4099	Open in IMG/M
3300025647\|Ga0208160_1023655	All Organisms → Viruses → Predicted Viral	1918	Open in IMG/M
3300025653\|Ga0208428_1001383	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	10222	Open in IMG/M
3300025653\|Ga0208428_1176077	Not Available	559	Open in IMG/M
3300025674\|Ga0208162_1043135	All Organisms → Viruses → Predicted Viral	1559	Open in IMG/M
3300025674\|Ga0208162_1071168	All Organisms → Viruses	1100	Open in IMG/M
3300025751\|Ga0208150_1113550	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Kyanoviridae	878	Open in IMG/M
3300025815\|Ga0208785_1033034	All Organisms → Viruses → Predicted Viral	1570	Open in IMG/M
3300026085\|Ga0208880_1048010	All Organisms → Viruses → Duplodnaviria → Heunggongvirae → Uroviricota → Caudoviricetes → Caudovirales → Myoviridae	923	Open in IMG/M
3300026138\|Ga0209951_1013883	All Organisms → Viruses → Predicted Viral	1784	Open in IMG/M
3300026183\|Ga0209932_1019839	All Organisms → Viruses → Predicted Viral	1767	Open in IMG/M
3300027917\|Ga0209536_101218583	Not Available	923	Open in IMG/M
3300031565\|Ga0307379_11097059	Not Available	669	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Aquatic	Environmental → Aquatic	99.11%
Terrestrial	Environmental → Terrestrial	0.89%

Habitat	Taxonomy	Distribution
Marine	Environmental → Aquatic → Marine	85.71%
Freshwater	Environmental → Aquatic → Freshwater	5.36%
Non-Marine Saline And Alkaline	Environmental → Aquatic → Non-Marine Saline And Alkaline	5.36%
Sediment	Environmental → Aquatic → Sediment	2.68%
Soil	Environmental → Terrestrial → Soil	0.89%

Habitat	Taxonomy	Distribution
Coastal	Environmental → Aquatic → Marine → Coastal	57.14%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified	8.93%
Saline	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline	5.36%
Oceanic	Environmental → Aquatic → Marine → Oceanic	2.68%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	2.68%
Lake	Environmental → Aquatic → Freshwater → Lake	1.79%
Lotic	Environmental → Aquatic → Freshwater → Lotic	1.79%
River	Environmental → Aquatic → Freshwater → River	1.79%
Neritic Zone	Environmental → Aquatic → Marine → Neritic Zone	1.79%
Wetlands	Environmental → Aquatic → Marine → Wetlands	0.89%
Clay	Environmental → Terrestrial → Soil → Clay	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Aquatic → Marine → Coastal → Unclassified	57.14%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh	14.29%
Unclassified	Environmental → Aquatic → Marine → Unclassified → Unclassified	8.93%
Unclassified	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified	5.36%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Lotic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → River → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Oceanic → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Marine → Neritic Zone → Unclassified	1.79%
Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment	0.89%
Sediment	Environmental → Aquatic → Marine → Wetlands → Sediment	0.89%
Unclassified	Environmental → Terrestrial → Soil → Clay → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Aqueous	Environmental → Aquatic → Marine → Coastal → Unclassified → Aqueous	41.07%
Freshwater To Marine Saline Gradient	Environmental → Aquatic → Marine → Coastal → Unclassified → Freshwater To Marine Saline Gradient	14.29%
Salt Marsh	Environmental → Aquatic → Marine → Intertidal Zone → Salt Marsh → Salt Marsh	14.29%
Estuarine Water	Environmental → Aquatic → Marine → Unclassified → Unclassified → Estuarine Water	8.93%
Pond Water	Environmental → Aquatic → Non-Marine Saline And Alkaline → Saline → Unclassified → Pond Water	5.36%
Lake	Environmental → Aquatic → Freshwater → Lake → Unclassified → Lake	1.79%
Freshwater	Environmental → Aquatic → Freshwater → Lotic → Unclassified → Freshwater	1.79%
Freshwater	Environmental → Aquatic → Freshwater → River → Unclassified → Freshwater	1.79%
Seawater	Environmental → Aquatic → Marine → Coastal → Unclassified → Seawater	1.79%
Marine	Environmental → Aquatic → Marine → Neritic Zone → Unclassified → Marine	1.79%
Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment	1.79%
Marine	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine	0.89%
Marine Plankton	Environmental → Aquatic → Marine → Oceanic → Unclassified → Marine Plankton	0.89%
Marine Sediment	Environmental → Aquatic → Marine → Oceanic → Sediment → Marine Sediment	0.89%
Wetland	Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland	0.89%
Marine Methane Seep Sediment	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Marine Methane Seep Sediment	0.89%
Soil	Environmental → Terrestrial → Soil → Clay → Unclassified → Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300000116	Marine microbial communities from Delaware Coast, sample from Delaware MO Spring March 2010	Environmental	Open in IMG/M
3300001213	Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly)	Environmental	Open in IMG/M
3300001830	Marine plankton microbial communities from the Amazon River plume, Atlantic Ocean - ACM40, ROCA_DNA028_0.2um_3l	Environmental	Open in IMG/M
3300005805	Microbial and algae communities from Cheney Reservoir in Wichita, Kansas, USA	Environmental	Open in IMG/M
3300006025	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA	Environmental	Open in IMG/M
3300006026	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_<0.8_DNA	Environmental	Open in IMG/M
3300006810	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01	Environmental	Open in IMG/M
3300006868	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA	Environmental	Open in IMG/M
3300006869	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_N_>0.8_DNA	Environmental	Open in IMG/M
3300006870	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA	Environmental	Open in IMG/M
3300006874	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_>0.8_DNA	Environmental	Open in IMG/M
3300006916	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Nov_24	Environmental	Open in IMG/M
3300007538	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_2 Viral MetaG	Environmental	Open in IMG/M
3300007539	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG	Environmental	Open in IMG/M
3300007541	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG	Environmental	Open in IMG/M
3300007960	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1D Viral MetaG	Environmental	Open in IMG/M
3300009000	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG	Environmental	Open in IMG/M
3300009001	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_C_H2O_MG	Environmental	Open in IMG/M
3300009124	Marine sediment microbial communities from methane seeps within Hudson Canyon, US Atlantic Margin - Hudson Canyon PC-16 72 cmbsf	Environmental	Open in IMG/M
3300010296	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.8_DNA	Environmental	Open in IMG/M
3300010297	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_DNA	Environmental	Open in IMG/M
3300010299	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_DNA	Environmental	Open in IMG/M
3300010300	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_DNA	Environmental	Open in IMG/M
3300010318	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_DNA	Environmental	Open in IMG/M
3300010354	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_0.6_0.8_DNA	Environmental	Open in IMG/M
3300010389	Marine sediment microbial communities from methane seeps within Baltimore Canyon, US Atlantic Margin - Baltimore Canyon MUC-11 12-14 cmbsf	Environmental	Open in IMG/M
3300011268	Sub-surface freshwater microbial communities from San Francisco Estuary Delta, California, USA . Combined Assembly of Gp0173482, Gp0175554, Gp0175555	Environmental	Open in IMG/M
3300012504	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012520	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012528	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_27_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012965	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_20_0.8_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012966	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.8_RNA2 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012967	Freshwater to marine salinity gradient microbial communities from Chesapeake Bay, USA - CPBay_Sum_15_0.2_RNA1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017949	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071406AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017952	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405CT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017956	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071403BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017958	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017962	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017964	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071410BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300017967	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071411BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300018421	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG (megahit assembly)	Environmental	Open in IMG/M
3300021335	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO540	Environmental	Open in IMG/M
3300021425	Coastal seawater microbial communities near Pivers Island, North Carolina, United States - PICO284	Environmental	Open in IMG/M
3300021958	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_27D	Environmental	Open in IMG/M
3300021959	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_13D	Environmental	Open in IMG/M
3300021960	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_9D	Environmental	Open in IMG/M
3300021961	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_3D	Environmental	Open in IMG/M
3300021964	Estuarine water microbial communities from San Francisco Bay, California, United States - C33_34D	Environmental	Open in IMG/M
3300022057	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_28 (v2)	Environmental	Open in IMG/M
3300022069	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Aug_30 (v2)	Environmental	Open in IMG/M
3300022071	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v2)	Environmental	Open in IMG/M
3300022187	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - Viral MetaG DEL_Sep_01 (v3)	Environmental	Open in IMG/M
3300022198	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (v3)	Environmental	Open in IMG/M
3300022200	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (v3)	Environmental	Open in IMG/M
3300022935	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071405AT metaG	Environmental	Open in IMG/M
3300022937	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071404AT metaG	Environmental	Open in IMG/M
3300023116	Coastal salt marsh microbial communities from the Groves Creek Marsh, Skidaway Island, Georgia - 071412BT metaG	Environmental	Open in IMG/M
3300024289	Freshwater microbial communities from Altamaha River, Georgia, United States - Atl_Miss_RepA_8h	Environmental	Open in IMG/M
3300024570	Metatranscriptome of freshwater microbial communities from Altamaha River, Georgia, United States - Atl_UVDOM_RepB_8h (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300025646	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1S Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025647	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1504_1 Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025653	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_N_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025674	Freshwater to marine saline gradient viral communities from Chesapeake Bay - CB_1508_1M Viral MetaG (SPAdes)	Environmental	Open in IMG/M
3300025751	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_29_D_>0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300025815	Aqueous microbial communities from the Delaware River and Bay under freshwater to marine salinity gradient to study organic matter cycling in a time-series - DEBay_Sum_22_D_<0.8_DNA (SPAdes)	Environmental	Open in IMG/M
3300026085	Seawater microbial communities from Saanich Inlet, British Columbia, Canada - Knorr_S23_td_SurfaceB_ad_5m_LV_B (SPAdes)	Environmental	Open in IMG/M
3300026138	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_A_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300026183	Salt pond water microbial communities from South San Francisco under conditions of wetland restoration - Salt Pond MetaG SF2_B_H2O_MG (SPAdes)	Environmental	Open in IMG/M
3300027917	Marine sediment microbial communities from White Oak River estuary, North Carolina - WOR-2-8_12 (SPAdes)	Environmental	Open in IMG/M
3300031565	Soil microbial communities from Risofladan, Vaasa, Finland - UN-2	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
DelMOSpr2010_1000073736	3300000116	Marine	MLKYIIARLRWGKLSQEDKEILKTMPVSQVFSRPYLNPKLYTQY*
DelMOSpr2010_102647011	3300000116	Marine	WGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW*
JGIcombinedJ13530_1066880052	3300001213	Wetland	MLKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLI
ACM40_10309021	3300001830	Marine Plankton	LARLRWGSLSPEQKEQLKTLPFRQVFFRPYLSPKLHKNYEKTLYS*
Ga0079957_10855884	3300005805	Lake	MLKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLIRKY*
Ga0079957_12416974	3300005805	Lake	ALARLRWGSLSPEQKEKLKLLSFRDVLKTPYLIRRF*
Ga0075474_100173724	3300006025	Aqueous	MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRKYYG*
Ga0075478_102186742	3300006026	Aqueous	MLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG*
Ga0070754_1000974014	3300006810	Aqueous	MVKYIFAQIRWGSLSPEQKEKVKALSFKELFSIPYLTPKFYINY*
Ga0070754_101382223	3300006810	Aqueous	MLKYILARLRWGSLSLQQKEILKDMSFIQVFKRPYLDPKLVKHY*
Ga0070754_101521904	3300006810	Aqueous	MLKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW*
Ga0070754_101567021	3300006810	Aqueous	MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY*
Ga0075481_102188892	3300006868	Aqueous	MLKYILARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY*
Ga0075477_103148801	3300006869	Aqueous	HIMLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG*
Ga0075479_101724441	3300006870	Aqueous	YILARLRWGSLSPEQKEKLKTLSFLEVFTLPYLVPKLYKHY*
Ga0075479_103824532	3300006870	Aqueous	MLKNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY*
Ga0075475_100188227	3300006874	Aqueous	MLKNILATLRWGSLSPEQKEELKTMSLRQVLNRPYLAPKLHKHY*
Ga0070750_102330811	3300006916	Aqueous	LKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW*
Ga0070750_104340472	3300006916	Aqueous	MLKNIIAFLRWGNLNKEQKEELKSLSIKEVFGRPYLAPKLHKHY*
Ga0099851_100017343	3300007538	Aqueous	MLKKIIATLRWGKLSKEQKEELKTLTLKQVFSRPYLAPKLYHHW*
Ga0099851_100998811	3300007538	Aqueous	MLKYILASLRWGNLSNEEREVLKTLPLSQVLKRPYLAPKLQKHC*
Ga0099851_10178407	3300007538	Aqueous	MLKYIFARLRWGSLSPEQKEKLKTLSLKEVFDTPYLIRKY*
Ga0099851_12690313	3300007538	Aqueous	RHTLLKMLKNILARLRWGSLSPQQKEQLETISLGQVIKRPYLCPKLHKHY*
Ga0099849_10788111	3300007539	Aqueous	LLKMLKNFLARLRWGSLSPEQKEELQTLPISAVFTRPYLAPKLYKHY*
Ga0099848_10096574	3300007541	Aqueous	MKYFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY*
Ga0099848_10105134	3300007541	Aqueous	MLKYFLAEIRWGSLSPEQKEELKTLPLSEVFKRPYLAPKLQKHY*
Ga0099850_11217274	3300007960	Aqueous	MLKNIIAFLRWGNLNKEQKEELKTLSIREVFGRPYLAPKLHKHY*
Ga0102960_10115255	3300009000	Pond Water	MLKTIIAMLRWGNLSPEQKQKLETLSLKEVLNTPYLIRKY*
Ga0102960_101549612	3300009000	Pond Water	MLKYIIARLRWGSLSPEHKERLKTLSLKEVFNTPYLIRKY*
Ga0102963_10124268	3300009001	Pond Water	MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNAPYLIRKY*
Ga0102963_10193532	3300009001	Pond Water	MLKYIIARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY*
Ga0118687_100032597	3300009124	Sediment	MLKNLLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY*
Ga0118687_100382851	3300009124	Sediment	YIIARLRWGSLSPEHKERLKTLSLKEVFDTPYLIRKY*
Ga0129348_10068844	3300010296	Freshwater To Marine Saline Gradient	MKYFLARLRWGSLSPEQKEQLKTLPLSAVFTRPYLAPKLYKHY*
Ga0129348_10423153	3300010296	Freshwater To Marine Saline Gradient	MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLYKHY*
Ga0129348_10848003	3300010296	Freshwater To Marine Saline Gradient	MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY*
Ga0129348_11219552	3300010296	Freshwater To Marine Saline Gradient	MKYIFARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY*
Ga0129345_10080643	3300010297	Freshwater To Marine Saline Gradient	MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY*
Ga0129345_10624454	3300010297	Freshwater To Marine Saline Gradient	MIKNILASIRWGSLSPEQKEELKTMPLLEVFTRPYLIPKLHKHY*
Ga0129345_13431662	3300010297	Freshwater To Marine Saline Gradient	MLKNLLARLRWGSLSPEQKEELKTLSFRQVLNRPYLR
Ga0129342_10426314	3300010299	Freshwater To Marine Saline Gradient	YMIKKFLARLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY*
Ga0129342_10498951	3300010299	Freshwater To Marine Saline Gradient	MLKQLLAHLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY
Ga0129342_10649131	3300010299	Freshwater To Marine Saline Gradient	LARLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY*
Ga0129342_11739343	3300010299	Freshwater To Marine Saline Gradient	MLKNILARLRWGSLSPEQKEELKTMSLKQVFSRPYLVPKLH
Ga0129351_10416632	3300010300	Freshwater To Marine Saline Gradient	MLKSILASLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY*
Ga0136656_100044225	3300010318	Freshwater To Marine Saline Gradient	MIKNILASIRWGSLSPEQKEELKTMPLSEVFTRPYLIPKLHKHY*
Ga0129333_102865535	3300010354	Freshwater To Marine Saline Gradient	MFKNIISYLRWGSLSSEQKEKLKSLSLKKVFTTPYLIRRY*
Ga0129333_103558034	3300010354	Freshwater To Marine Saline Gradient	MLKYFLAEIRWGSLSPEQKEELKTLSLSEVFKRPYLTPKLQKHY*
Ga0129333_112073801	3300010354	Freshwater To Marine Saline Gradient	MLKNLLAELRWGPLTPEQQKELDTLPIKEVLRRPYL
Ga0136549_100111128	3300010389	Marine Methane Seep Sediment	MLKLIFARLRWGKLSQEQKEELKTLSLGQTLARPYLVPKLFKHY*
Ga0151620_10063046	3300011268	Freshwater	MFKYILAYIRWGDLTPEQENKLETLSLKEVLNTPYLIRRY*
Ga0151620_10083587	3300011268	Freshwater	MPAKMFKYILARLRWGSLSLQQKEKLQSLSFKEVLNVPYLIRKY*
Ga0129347_10190753	3300012504	Aqueous	MKYFLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHK
Ga0129347_10691331	3300012504	Aqueous	MIKNILASIRWGSLSPEQKEELKTMPLSEVFTRPYLIPK
Ga0129344_10240852	3300012520	Aqueous	MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLYKHY*
Ga0129344_12572121	3300012520	Aqueous	MLKNLLARLRWGSLSPEQKEELKTMSLRQVLNRPYLCPKLHTHY*
Ga0129352_104418801	3300012528	Aqueous	RWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY*
Ga0129346_10601744	3300012965	Aqueous	MLKNLLARLRWGSLSPEQKEELKTLSFRQVLNRTYL
Ga0129341_10821644	3300012966	Aqueous	KKIIATLRWGKLSKEQKEELKTHTLKQVLSRPYLAPKLYHHW*
Ga0129343_10362286	3300012967	Aqueous	MKYFLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY*
Ga0129343_11147363	3300012967	Aqueous	MIKKFLARLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY*
Ga0129343_11645352	3300012967	Aqueous	MLKQLLAHLRWGSLTLEQKEELKTLSFKEVFTRPYLDPKLHKHY*
Ga0181584_102186122	3300017949	Salt Marsh	MLKKIIATLRWGKLSKEQKEELKTLTLKQVLSRPYLAPKLYHHW
Ga0181584_103090584	3300017949	Salt Marsh	MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY
Ga0181584_104549332	3300017949	Salt Marsh	MFKNFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY
Ga0181583_101021271	3300017952	Salt Marsh	MLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKL
Ga0181583_104733292	3300017952	Salt Marsh	MLKNIIASLRWGKLNQEEKDELKKISLKEVLDRPYLVPKLHKHY
Ga0181583_108388951	3300017952	Salt Marsh	MFKNFLARLRWGSLSPKQKEELKTLPLSAVFSRPYLAPK
Ga0181580_100747085	3300017956	Salt Marsh	MLKNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY
Ga0181582_1007795211	3300017958	Salt Marsh	MIKYILARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY
Ga0181581_104963313	3300017962	Salt Marsh	MLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY
Ga0181589_104854403	3300017964	Salt Marsh	MKYFLARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY
Ga0181589_109380321	3300017964	Salt Marsh	LKKFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY
Ga0181590_100618564	3300017967	Salt Marsh	MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNATYLIRKY
Ga0181592_101387624	3300018421	Salt Marsh	MLKVLIAKLRWGKLSPEQKQKLEILSLKEVFNATYLIRKY
Ga0213867_10484424	3300021335	Seawater	MLKYIIARLRWGKLSQEDKEILKTMPVSQVFSRPYLNPKLYTQY
Ga0213866_1002298215	3300021425	Seawater	MIKYLLAFIRWGSLSPEQKEKVKALSLKELFSTPYLTPKLYINY
Ga0222718_100979103	3300021958	Estuarine Water	MLKYIIARLRWGSLSPEHKEKLKTLSLKEVFDTPYLIRKY
Ga0222716_100262577	3300021959	Estuarine Water	MLKNIIASLRWGKLNNEQKEELKKLSFKQVLGRPYLVPKLHKHYE
Ga0222716_100427302	3300021959	Estuarine Water	MLKNILARLRWGSLSPEQKEELKTMSLKQVFSRPYLVPKLHKHYEKTLYS
Ga0222716_100746593	3300021959	Estuarine Water	MKYILARLRWGSLSPEQKEKLKTMSFAEVFNRPYLTPKLHKHY
Ga0222715_1000403616	3300021960	Estuarine Water	MPAKMFKYILARLRWGSLSLQQKEKLQSLSFKEVLNVPYLIRKY
Ga0222715_100524961	3300021960	Estuarine Water	NFFARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY
Ga0222715_102463582	3300021960	Estuarine Water	MLKNLLAELRWGPLTPEQQKELDTLPIKEVLRRPYLAPKLHKHY
Ga0222714_1000051223	3300021961	Estuarine Water	MLKYILAYIRWGDLTSAQEDKLETLSLKEVLLTPYLIRKY
Ga0222714_100293462	3300021961	Estuarine Water	MLKNFFARLRWGSLSPEQKEELKTLPLSAVFTRPYLAPKLHKHY
Ga0222719_102474933	3300021964	Estuarine Water	MLKNLLARLRWGSLSPEQKEQLKTMSLRQVLNRPYLCPKLHKHY
Ga0212025_10298214	3300022057	Aqueous	MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRN
Ga0212026_10565601	3300022069	Aqueous	MVKYILAEIRWGSLSPQQKEKLSTLSLVETLRSPYL
Ga0212028_10677652	3300022071	Aqueous	MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIRKYYG
Ga0196899_10419322	3300022187	Aqueous	MLKYILARLRWGSLSPEQKEKLKTLSIKEVFNSPYLIRKYYG
Ga0196899_11000342	3300022187	Aqueous	MLKKIIATLRWGKLSKEQKEELKTLTLKQVFSRPYLAPKLYHHW
Ga0196905_100374912	3300022198	Aqueous	MLKYILASLRWGNLSNEEREVLKTLPLSQVLKRPYLAPKLQKHC
Ga0196901_10588123	3300022200	Aqueous	MLKYFLAEIRWGSLSPEQKEELKTLPLSEVFKRPYLTPKLQKHY
Ga0255780_100100601	3300022935	Salt Marsh	RLMLKYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLHKHY
Ga0255770_1004394610	3300022937	Salt Marsh	KNFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY
Ga0255751_103266873	3300023116	Salt Marsh	MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNATYL
Ga0255147_100022415	3300024289	Freshwater	MLKYIFAYLRWGSLSPEQKEELKTMSFKQVFTQPYLAPKLYKHW
Ga0255276_11657073	3300024570	Freshwater	KNIHIMLKYIFAYLRWGSLSPEQKEELKTMSFKQVFTQPYLAPKLYKHW
Ga0208161_10096374	3300025646	Aqueous	MKYFLARLRWGSLSPEQKEELKTLPISAVFTRPYLAPKLHKHY
Ga0208160_10236555	3300025647	Aqueous	MLKYIFARLRWGSLSPEQKEKLKTLSLKEVFDTPYLIRKY
Ga0208428_100138316	3300025653	Aqueous	MVKYIFAQIRWGSLSPEQKEKVKALSFKELFSIPYLTPKFYINY
Ga0208428_11760773	3300025653	Aqueous	KYILAKLRWGSLSPEQKEELKTLPISEVFSRPYLAPKLYKHY
Ga0208162_10431352	3300025674	Aqueous	MLKSILASLRWGSLSPEQKEELKTLPLLKVFTRPYLAPKLYKNY
Ga0208162_10711684	3300025674	Aqueous	KNMLKNFLARLRWGSLSPEQKEELKTLPLSAVFSRPYLAPKLHKHY
Ga0208150_11135502	3300025751	Aqueous	LARLRWGSLSPEQKEKLKTLSFLEVFTLPYLVPKLYKHY
Ga0208785_10330345	3300025815	Aqueous	MFKYIIARLRWGSLSPEKIEKLNTMTFSQVFTSPYLIR
Ga0208880_10480101	3300026085	Marine	LPKMLKYFLARLRWGSLSPEQKEELKTLPLSEVFSLPYLAPKLHKHY
Ga0209951_10138836	3300026138	Pond Water	MLKVLIAKLRWGKLSPEQKQKLETLSLKEVFNAPYLIRKY
Ga0209932_10198394	3300026183	Pond Water	MLKTIIAMLRWGNLSPEQKQKLETLSLKEVLNTPYLIRKY
Ga0209536_1012185832	3300027917	Marine Sediment	MIKYFFARIRWGSLSPEQKEKVKALSFKELFSTPYLTPKLYINY
Ga0307379_110970593	3300031565	Soil	IMLKYILARLRWGSLSPEHKEKLKTLSLKEVFNTPYLIRKY

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083878

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences