NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F083849

Metagenome Family F083849

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083849
Family Type Metagenome
Number of Sequences 112
Average Sequence Length 95 residues
Representative Sequence RKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPAIPDIDIAMPNIVIPSIPTINVQLPRIRVTPRVRVRGPQGPI
Number of Associated Samples 91
Number of Associated Scaffolds 112

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 0.00 %
% of genes near scaffold ends (potentially truncated) 98.21 %
% of genes from short scaffolds (< 2000 bps) 95.54 %
Associated GOLD sequencing projects 84
AlphaFold2 3D model prediction Yes
3D model pTM-score0.20

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (74.107 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere
(11.607 % of family members)
Environment Ontology (ENVO) Unclassified
(43.750 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(68.750 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 0.00%    β-sheet: 21.49%    Coil/Unstructured: 78.51%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.20
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 112 Family Scaffolds
PF02591zf-RING_7 16.07
PF01106NifU 0.89
PF01370Epimerase 0.89

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 112 Family Scaffolds
COG1579Predicted nucleic acid-binding protein DR0291, contains C4-type Zn-ribbon domainGeneral function prediction only [R] 16.07
COG0694Fe-S cluster biogenesis protein NfuA, 4Fe-4S-binding domainPosttranslational modification, protein turnover, chaperones [O] 0.89


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms75.00 %
UnclassifiedrootN/A25.00 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300000953|JGI11615J12901_10175091All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1459Open in IMG/M
3300004480|Ga0062592_102351034All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Planococcaceae → Kurthia → Kurthia huakuii534Open in IMG/M
3300005093|Ga0062594_103365953Not Available503Open in IMG/M
3300005290|Ga0065712_10643060All Organisms → cellular organisms → Bacteria → Acidobacteria571Open in IMG/M
3300005293|Ga0065715_10577150All Organisms → cellular organisms → Bacteria → Acidobacteria723Open in IMG/M
3300005294|Ga0065705_10660313All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium673Open in IMG/M
3300005333|Ga0070677_10186036All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium993Open in IMG/M
3300005336|Ga0070680_101420006All Organisms → cellular organisms → Bacteria → Acidobacteria601Open in IMG/M
3300005338|Ga0068868_101104760All Organisms → cellular organisms → Bacteria730Open in IMG/M
3300005343|Ga0070687_100263665All Organisms → cellular organisms → Bacteria → Acidobacteria1076Open in IMG/M
3300005344|Ga0070661_100399301All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1087Open in IMG/M
3300005345|Ga0070692_10468926All Organisms → cellular organisms → Bacteria → Acidobacteria809Open in IMG/M
3300005353|Ga0070669_100563827All Organisms → cellular organisms → Bacteria → Acidobacteria951Open in IMG/M
3300005355|Ga0070671_102069453Not Available507Open in IMG/M
3300005440|Ga0070705_100357877All Organisms → Viruses → Predicted Viral1066Open in IMG/M
3300005444|Ga0070694_100383606All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1096Open in IMG/M
3300005454|Ga0066687_10323485All Organisms → cellular organisms → Bacteria → Acidobacteria879Open in IMG/M
3300005458|Ga0070681_11481784All Organisms → cellular organisms → Bacteria → Acidobacteria603Open in IMG/M
3300005530|Ga0070679_102034594Not Available524Open in IMG/M
3300005539|Ga0068853_101466108All Organisms → cellular organisms → Bacteria → Acidobacteria660Open in IMG/M
3300005539|Ga0068853_102380492All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300005546|Ga0070696_100890860All Organisms → cellular organisms → Bacteria → Acidobacteria738Open in IMG/M
3300005549|Ga0070704_101986747All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium540Open in IMG/M
3300005549|Ga0070704_102253997Not Available507Open in IMG/M
3300005563|Ga0068855_100490217All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1337Open in IMG/M
3300005564|Ga0070664_101882239Not Available568Open in IMG/M
3300005578|Ga0068854_101007440All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium738Open in IMG/M
3300005618|Ga0068864_102211161All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium556Open in IMG/M
3300005719|Ga0068861_101091009All Organisms → cellular organisms → Bacteria → Acidobacteria767Open in IMG/M
3300005840|Ga0068870_11203752Not Available548Open in IMG/M
3300005841|Ga0068863_102277519Not Available551Open in IMG/M
3300005841|Ga0068863_102577776Not Available517Open in IMG/M
3300005842|Ga0068858_100826167All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium904Open in IMG/M
3300005843|Ga0068860_101618040All Organisms → cellular organisms → Bacteria → Acidobacteria670Open in IMG/M
3300005844|Ga0068862_101425195All Organisms → cellular organisms → Bacteria → Acidobacteria696Open in IMG/M
3300005844|Ga0068862_102717860Not Available506Open in IMG/M
3300006846|Ga0075430_101689950All Organisms → cellular organisms → Bacteria → Acidobacteria519Open in IMG/M
3300006852|Ga0075433_10922195All Organisms → cellular organisms → Bacteria → Acidobacteria762Open in IMG/M
3300006852|Ga0075433_11875609Not Available514Open in IMG/M
3300006854|Ga0075425_102705757All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium547Open in IMG/M
3300006871|Ga0075434_100596691All Organisms → cellular organisms → Bacteria → Acidobacteria1123Open in IMG/M
3300006880|Ga0075429_101542753All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium578Open in IMG/M
3300006894|Ga0079215_10434576All Organisms → cellular organisms → Bacteria → Acidobacteria790Open in IMG/M
3300006894|Ga0079215_10508012All Organisms → cellular organisms → Bacteria754Open in IMG/M
3300007004|Ga0079218_10467499All Organisms → cellular organisms → Bacteria1102Open in IMG/M
3300007004|Ga0079218_12940017All Organisms → cellular organisms → Bacteria → Acidobacteria573Open in IMG/M
3300007076|Ga0075435_101785118All Organisms → cellular organisms → Bacteria → Acidobacteria540Open in IMG/M
3300009101|Ga0105247_11606079Not Available534Open in IMG/M
3300009101|Ga0105247_11823056Not Available507Open in IMG/M
3300009147|Ga0114129_12083736All Organisms → cellular organisms → Bacteria → Acidobacteria685Open in IMG/M
3300009156|Ga0111538_14098802All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes503Open in IMG/M
3300009162|Ga0075423_11452054All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes735Open in IMG/M
3300009177|Ga0105248_13128968All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes527Open in IMG/M
3300009545|Ga0105237_10025541All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes6039Open in IMG/M
3300009553|Ga0105249_13515309Not Available505Open in IMG/M
3300010036|Ga0126305_10244130All Organisms → cellular organisms → Bacteria → Acidobacteria1152Open in IMG/M
3300010037|Ga0126304_10177474All Organisms → cellular organisms → Bacteria → Acidobacteria1387Open in IMG/M
3300010038|Ga0126315_10329796All Organisms → cellular organisms → Bacteria → Acidobacteria947Open in IMG/M
3300010041|Ga0126312_10788594All Organisms → cellular organisms → Bacteria → Acidobacteria689Open in IMG/M
3300010042|Ga0126314_10513386All Organisms → cellular organisms → Bacteria → Acidobacteria870Open in IMG/M
3300010042|Ga0126314_11420877Not Available521Open in IMG/M
3300010359|Ga0126376_10182361All Organisms → cellular organisms → Bacteria1720Open in IMG/M
3300010373|Ga0134128_11798246All Organisms → cellular organisms → Bacteria → Acidobacteria674Open in IMG/M
3300010373|Ga0134128_12587960All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium559Open in IMG/M
3300010375|Ga0105239_10656336All Organisms → cellular organisms → Bacteria → Acidobacteria1198Open in IMG/M
3300010375|Ga0105239_12642755Not Available586Open in IMG/M
3300010375|Ga0105239_13077969All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium543Open in IMG/M
3300010397|Ga0134124_11965823Not Available621Open in IMG/M
3300010397|Ga0134124_12726218Not Available538Open in IMG/M
3300010399|Ga0134127_10171710All Organisms → cellular organisms → Bacteria1991Open in IMG/M
3300010399|Ga0134127_10897217All Organisms → cellular organisms → Bacteria → Acidobacteria941Open in IMG/M
3300010399|Ga0134127_11513021All Organisms → cellular organisms → Bacteria → Acidobacteria744Open in IMG/M
3300010400|Ga0134122_10506349All Organisms → cellular organisms → Bacteria → Acidobacteria1094Open in IMG/M
3300010400|Ga0134122_13201841All Organisms → cellular organisms → Bacteria → Acidobacteria513Open in IMG/M
3300010403|Ga0134123_12421359All Organisms → cellular organisms → Bacteria → Acidobacteria590Open in IMG/M
3300012951|Ga0164300_10565752Not Available664Open in IMG/M
3300012957|Ga0164303_10720736All Organisms → cellular organisms → Bacteria675Open in IMG/M
3300012960|Ga0164301_11837023Not Available510Open in IMG/M
3300013297|Ga0157378_12809901All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium539Open in IMG/M
3300013307|Ga0157372_11043009All Organisms → cellular organisms → Bacteria → Acidobacteria946Open in IMG/M
3300013760|Ga0120188_1003314All Organisms → cellular organisms → Bacteria → Acidobacteria1169Open in IMG/M
3300014969|Ga0157376_10488032All Organisms → cellular organisms → Bacteria → Acidobacteria1208Open in IMG/M
3300015371|Ga0132258_10598940All Organisms → cellular organisms → Bacteria2766Open in IMG/M
3300015372|Ga0132256_100711648All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1120Open in IMG/M
3300015373|Ga0132257_104094163Not Available530Open in IMG/M
3300018422|Ga0190265_13777276Not Available505Open in IMG/M
3300018466|Ga0190268_10346422All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes922Open in IMG/M
3300019377|Ga0190264_12045492All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes527Open in IMG/M
3300021445|Ga0182009_10106354All Organisms → cellular organisms → Bacteria → Acidobacteria1286Open in IMG/M
3300025735|Ga0207713_1250637Not Available522Open in IMG/M
3300025908|Ga0207643_10369032All Organisms → cellular organisms → Bacteria → Acidobacteria903Open in IMG/M
3300025913|Ga0207695_10750595All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes856Open in IMG/M
3300025918|Ga0207662_11087636All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes568Open in IMG/M
3300025930|Ga0207701_11135956Not Available646Open in IMG/M
3300025934|Ga0207686_10035457All Organisms → cellular organisms → Bacteria2995Open in IMG/M
3300025941|Ga0207711_11464683All Organisms → cellular organisms → Bacteria → Acidobacteria626Open in IMG/M
3300025981|Ga0207640_11715108All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes567Open in IMG/M
3300026088|Ga0207641_11535967Not Available667Open in IMG/M
3300026088|Ga0207641_11592251All Organisms → cellular organisms → Bacteria → Acidobacteria655Open in IMG/M
3300026088|Ga0207641_12467446All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium518Open in IMG/M
3300026089|Ga0207648_10446087All Organisms → cellular organisms → Bacteria → Acidobacteria1178Open in IMG/M
3300026095|Ga0207676_11821100All Organisms → cellular organisms → Bacteria → Acidobacteria607Open in IMG/M
3300026118|Ga0207675_102549591Not Available522Open in IMG/M
3300026300|Ga0209027_1249732All Organisms → cellular organisms → Bacteria → Acidobacteria569Open in IMG/M
3300027775|Ga0209177_10468471Not Available519Open in IMG/M
3300027909|Ga0209382_11069454All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → Blastocatellales → Pyrinomonadaceae → Pyrinomonas → Pyrinomonas methylaliphatogenes835Open in IMG/M
3300031716|Ga0310813_10760720All Organisms → cellular organisms → Bacteria → Acidobacteria869Open in IMG/M
3300031731|Ga0307405_11800606All Organisms → cellular organisms → Bacteria → Acidobacteria544Open in IMG/M
3300031903|Ga0307407_10241287All Organisms → cellular organisms → Bacteria → Acidobacteria → Blastocatellia → unclassified Blastocatellia → Blastocatellia bacterium1233Open in IMG/M
3300031903|Ga0307407_11199077All Organisms → cellular organisms → Bacteria → Acidobacteria593Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere11.61%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere9.82%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil8.93%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil6.25%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil5.36%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere5.36%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere5.36%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere5.36%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil4.46%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere4.46%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere3.57%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere2.68%
RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Rhizosphere2.68%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere2.68%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.79%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere1.79%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere1.79%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere1.79%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil0.89%
TerrestrialEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial0.89%
Switchgrass RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Switchgrass Rhizosphere0.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.89%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300000953Soil microbial communities from Great Prairies - Kansas Corn soilEnvironmentalOpen in IMG/M
3300004480Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 4EnvironmentalOpen in IMG/M
3300005093Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of KBS All BlocksEnvironmentalOpen in IMG/M
3300005290Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Rhizosphere Soil Replicate 1: eDNA_1Host-AssociatedOpen in IMG/M
3300005293Miscanthus rhizosphere microbial communities from Kellogg Biological Station, MSU, sample Bulk Soil Replicate 1 : eDNA_1Host-AssociatedOpen in IMG/M
3300005294Switchgrass rhizosphere bacterial communities from Rose Lake, Michigan, USA - RL2 Bulk SoilEnvironmentalOpen in IMG/M
3300005333Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-3 metaGHost-AssociatedOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005338Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2Host-AssociatedOpen in IMG/M
3300005343Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaGEnvironmentalOpen in IMG/M
3300005344Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-3 metaGHost-AssociatedOpen in IMG/M
3300005345Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-2 metaGEnvironmentalOpen in IMG/M
3300005353Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S5-3 metaGHost-AssociatedOpen in IMG/M
3300005355Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S7-3 metaGHost-AssociatedOpen in IMG/M
3300005440Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-3 metaGEnvironmentalOpen in IMG/M
3300005444Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-1 metaGEnvironmentalOpen in IMG/M
3300005454Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136EnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005530Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaGEnvironmentalOpen in IMG/M
3300005539Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C3-2Host-AssociatedOpen in IMG/M
3300005546Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-25-3 metaGEnvironmentalOpen in IMG/M
3300005549Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-25-2 metaGEnvironmentalOpen in IMG/M
3300005563Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C5-2Host-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005618Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2Host-AssociatedOpen in IMG/M
3300005719Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2Host-AssociatedOpen in IMG/M
3300005840Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2Host-AssociatedOpen in IMG/M
3300005841Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2Host-AssociatedOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300005843Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2Host-AssociatedOpen in IMG/M
3300005844Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2Host-AssociatedOpen in IMG/M
3300006846Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD4Host-AssociatedOpen in IMG/M
3300006852Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD2Host-AssociatedOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006880Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD3Host-AssociatedOpen in IMG/M
3300006894Agricultural soil microbial communities from Utah to study Nitrogen management - NC ControlEnvironmentalOpen in IMG/M
3300007004Agricultural soil microbial communities from Utah to study Nitrogen management - NC CompostEnvironmentalOpen in IMG/M
3300007076Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD4Host-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009147Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD1 (version 2)Host-AssociatedOpen in IMG/M
3300009156Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009162Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD2Host-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009545Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010036Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot26EnvironmentalOpen in IMG/M
3300010037Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot25EnvironmentalOpen in IMG/M
3300010038Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot106EnvironmentalOpen in IMG/M
3300010041Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot104AEnvironmentalOpen in IMG/M
3300010042Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105BEnvironmentalOpen in IMG/M
3300010359Tropical forest soil microbial communities from Panama - MetaG Plot_15EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010399Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-3EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300012951Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_226_MGEnvironmentalOpen in IMG/M
3300012957Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_207_MGEnvironmentalOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300013297Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaGHost-AssociatedOpen in IMG/M
3300013307Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C5-5 metaGHost-AssociatedOpen in IMG/M
3300013760Terrestrial microbial communites from a soil warming plot in Okalahoma, USA - C3.rep2EnvironmentalOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300018422Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 124 TEnvironmentalOpen in IMG/M
3300018466Populus adjacent soil microbial communities from riparian zone of Blue River, Arizona, USA - 249 TEnvironmentalOpen in IMG/M
3300019377Populus adjacent soil microbial communities from riparian zone of Indian Creek, Utah, USA - 112 TEnvironmentalOpen in IMG/M
3300021445Bulk soil microbial communities from the field in Mead, Nebraska, USA - 072115-187_1 MetaGEnvironmentalOpen in IMG/M
3300025735Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025908Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025913Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025918Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025930Switchgrass rhizosphere bulk soil microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025941Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026088Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026089Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M3-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026095Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026118Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026300Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027775Agricultural soil microbial communities from Georgia to study Nitrogen management - GA Control (SPAdes)EnvironmentalOpen in IMG/M
3300027909Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD5 (SPAdes)Host-AssociatedOpen in IMG/M
3300031716Soil microbial communities from experimental microcosm in Duke University, North Carolina, United States - YN3EnvironmentalOpen in IMG/M
3300031731Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-C-1Host-AssociatedOpen in IMG/M
3300031903Maize rhizosphere microbial communities from greenhouse at UC Davis, California, United States - 322HYB-O-1Host-AssociatedOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
JGI11615J12901_1017509133300000953SoilEAVDSPGDLSRVINRKKDGNVTLTVIRNKSQQTFTVTPGEGGFSGSVGRPQIGRRIVIPRIEIPTIPDIDIEMPAIQIQGTPAINVRMPPIRVRGPRVRITRGERGPI*
Ga0062592_10235103413300004480SoilVITAIDGEEVDSSGDISRVINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSGRLGQPQIGRQIVIPRIEIPMPDIDIAMPRIVIPSVPSINIEMPRVRVTPGARVRTVRGPI*
Ga0062594_10336595313300005093SoilPGDISRVINRKKEGDITLTVIRNKSQQTIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMPDIEIAMPTINIPSVPAVNVKMPPIRVTMPRVRVIRSERGPI*
Ga0065712_1064306013300005290Miscanthus RhizosphereDVTLTIIRNKSQQTIHVTPREGGGGFPGTMGNPQVGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0065715_1057715023300005293Miscanthus RhizosphereEGDVTLTIIRNKSQQTIHVTPREGGGFPGTINNPQTGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0065705_1066031313300005294Switchgrass RhizosphereNKSQQTIQVTPREGGGFSGTMDQPQVGRRIVIPRVEFPDIDVAMPRIVIPSFPSININLPRVRVTPARVRIRNVQAPI*
Ga0070677_1018603623300005333Miscanthus RhizosphereAVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIRVTPSEARGLGTLDRPQVGRRIVIPRIDFPDIDIAMPRVVVPAVSIPSININMPRIRVTPRARIRTVNGPI*
Ga0070680_10142000613300005336Corn RhizosphereNRKKEGDVTLTVIRNKSQQTIRVTPREGNVSGTLGRPTVGRRIVIPRIEIPTPEIDIAMPSIVIPSIPSVNINMPRIRVMPRIRARGVMGPI*
Ga0068868_10110476013300005338Miscanthus RhizosphereNRKKDGDITLTVIRNKSQQTFHVTPKEGGGFSGTPDEPQVGRRIVIPRIDFPSIDIAMPQIAVPAININLPRVRVTPRVRVRTVQGPI*
Ga0070687_10026366513300005343Switchgrass RhizosphereVINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSGRLGQPEIGRQIVIPRIEFPMPEIDIAMPRIVIPSVPSINIEMPRVRVTPGARVRTVRGPI*
Ga0070661_10039930113300005344Corn RhizosphereSRVINRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0070692_1046892613300005345Corn, Switchgrass And Miscanthus RhizosphereAVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIHVTPREGVGYSGTMGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI*
Ga0070669_10056382713300005353Switchgrass RhizosphereIRNKSQQTIRVTPREGVGMGTSGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0070671_10070683613300005355Switchgrass RhizosphereAIEGEEVDSPGDLSRVMNRKKEGDVTLTIIRNKSQQTIRVTPSEARGVGTLDRPQVGRRIVIPRIDFPDIEIAMPRVVVPAVSIPSININMPRIRVTPRARIRTTQGPI*
Ga0070671_10206945313300005355Switchgrass RhizosphereDSPGDISRVINRKKEGDVTLTIIRNKSQQTIHVTPREGVGYSGTMGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI*
Ga0070705_10035787723300005440Corn, Switchgrass And Miscanthus RhizosphereEAVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIRVTPREGVGMGTLSNPQIGRRIVIPRIEIPTIPDIEIAMPDIVVPSTPTINVRMPQIRVPMPRIRVTPRVRGPQGPI*
Ga0070694_10038360623300005444Corn, Switchgrass And Miscanthus RhizosphereDGEKVDSPGDLSRVINRKKEGDVTLTVIRNKSQQTFRVTPKEGGGFSGTMDEPQVGRRIVIPRIEFPNIDIAMPQIVIPSIPSININLPRIRVTPRVRVRTVQGPI*
Ga0066687_1032348533300005454SoilDGDVTLTIIRNKAQQTIRVTPREGGGFSGTMGQPQVGRRIVIPRIQIPTIPDIDIAMPEIVIPSIPSIDIQLPRVRVVKTGQDPI*
Ga0070681_1148178423300005458Corn RhizosphereEGDVTLTIIRNRAQQTIRVTPKQGGGFSGTVSPPEIGRRIVIPRIEIPTPEIEVSMPRIVIPSIPSINIELPRVRVTPRVRVVRTSQGPI*
Ga0070679_10203459413300005530Corn RhizosphereKKEGDVTLTIIRNKSQQTIRVTPREGVGMRTMGNPQIGRRIVIPRIEIPTIPDININVAMPRIRVTPRIRIRGSQGPI*
Ga0068853_10146610813300005539Corn RhizosphereISRVINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSRTLGQPQIGRQIVIPRIEIPMPEIDVAMPRIVIPSVPSINIEMPRIRVTPRIRARGVQGPI*
Ga0068853_10238049213300005539Corn RhizosphereSGDVSRVINNKKEGDVTLTIIRNRAQQTIRVTPKQGGGFSGTVSPPEIGRRIVIPRIEIPTPEIEVSMPRIVIPSIPSINIELPRVRVTPRVRVVRTSQGPI*
Ga0070696_10089086023300005546Corn, Switchgrass And Miscanthus RhizosphereKKEGDVTLTIIRNKSQQTIRVTPREGVGMGTMGNPQIGRRIVIPRIEIPTIPDIDIAMPNIVIPSMPTINIQMPHIRVTPRVRVRGPQGPI*
Ga0070704_10198674713300005549Corn, Switchgrass And Miscanthus RhizosphereAVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIRVTPKEGGGFSGAPGRPQVGRRIVIPRIEIPTIPDIDIAMPRIVIPAMPSINIEMPRIRVSPRVVRTSQGPI*
Ga0070704_10225399713300005549Corn, Switchgrass And Miscanthus RhizosphereTIIRNKSQQTIHVTPREGGGFSGTIGNPQIGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0068855_10049021713300005563Corn RhizospherePGDLSRAINRKKEGEVTLTVIRNKSQQTFRVTPKEGGGFSGTMDQPEVGRRIVIPRIDFPDIDIAMPQIVIPSIPSININLPRVRVTPRARVRTVQGPI*
Ga0070664_10188223913300005564Corn RhizosphereVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIHVTPREGVGYSGTMGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI*
Ga0068854_10027468423300005578Corn RhizosphereAIEGEEVDSPGDLSRVMNRKKEGDVTLTIIRNKSQQTIRVTPSEARGVGTLDRPQVGRRIVIPRIDFPDIEIAMPRVVVPAVSIPSININMPRIRVTPRRIRTVNGPI*
Ga0068854_10100744013300005578Corn RhizosphereTAIDGEAVDSPGDLARAINRKKEGDVTLTVIRNRSQQTFRVTPVAGEGFTGTMGRPQIGRRIVIPRIEIPDVPEIDIETPRIRTPRIQVPAVDIRMPRIRVTPRLRVLRGERGPI*
Ga0068864_10221116123300005618Switchgrass RhizosphereDISRVINRKKEGDVTLTIIRNKSQQTIHVSPREGGGFSGTLGNPQVGRRIVIPRIEIPSIPDIDIAMPNIVIPSIPTINVQLPRIRVTPRVRVRGPQGPI*
Ga0068861_10109100923300005719Switchgrass RhizosphereTVIRNKSQQTIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMDIDIAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI*
Ga0068870_1120375213300005840Miscanthus RhizosphereIRNKSQQTIHVTPREGVGTGTMGNPQIGRRIVIPRIVIPTIPDIDVVMPNIVIPSIPAINVQMPRIRVMPRVRSRGPQGPI*
Ga0068863_10227751923300005841Switchgrass RhizosphereGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0068863_10257777623300005841Switchgrass RhizosphereTLTIIRNKSQQTIHVTPREGGGFSGTIGNPQIGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0068858_10082616713300005842Switchgrass RhizosphereDVSLTIIRNKSQQTIRVTPREGGGFSGRLGQPQIGRQIVIPRIEFPMPEIDIAMPRIVIPSMPSINIEMPRVRVTPGARVRTVRGPI*
Ga0068860_10161804023300005843Switchgrass RhizosphereTLTIVRNKSQQTIHVTPREGGVSGGMGQPQSGRRIVIPRIEIPMPDINITVPAVNIKMPPIRVIRSERGPI*
Ga0068862_10142519513300005844Switchgrass RhizosphereKKEGDVTLTIIRNKSQQTIHVTPREGVGSGTFGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0068862_10271786013300005844Switchgrass RhizosphereVINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSRTLGQPQIGRQIVIPRIEIPMPEIDVAMPRIVIPSVPSINIEMPRIRVTPRIRARGVQGPI*
Ga0075430_10168995013300006846Populus RhizosphereRKKEGEVTLTIIRNKSQQTIRVTPKEGGGFSGTTTEPELGRRIVIPRIEIPMPEIDIAMPRIVIPSIPSININLPRVRVTPRVRVVRTGQGPI*
Ga0075433_1092219513300006852Populus RhizosphereIRNKSQQTIRVTPRDGGFSGTPGQPQIGRRIVIPRIEIQTIPDIDISMPDIVIPSMPTINVQMPRIRVTRPIRVRVRGTQGPI*
Ga0075433_1187560923300006852Populus RhizosphereINRKKEGDVTLTIIRNKTQQTIHVTPKEGGGFSGTMGEPQVGRRIVIPRIEIPEIEVEMPGINIPSININLPRARVPRVRIVRTGQGPI*
Ga0075425_10270575723300006854Populus RhizosphereAINRKKEGDVTLTVIRNKAQQTIRVTPNEGAFSGTMGQPQIGRRIVIPRIEIPTIPDIDIEMPRIVIPSIPAINIDMPRIRVAPRARVRNVNGPI*
Ga0075434_10059669123300006871Populus RhizosphereTLTVVRNKSQQTIQVTPSEGGFSGGMGRPTVGRRIVVPRIEIPTMDIDVAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI*
Ga0075429_10154275313300006880Populus RhizosphereDSPGGLSRVINRKKEGDVTLTVIRNKSQQTFRVTPKEGGGFSGTMDEPQVGRRIVIPRIEFPDIDIAMPQIVMPQIVVPAIPSININLPRVRVTPRVRIRAVQGPI*
Ga0079215_1043457613300006894Agricultural SoilKEGDVTLTIIRNRQQQTIRVTPREGGFSGVVGQPQIGRRILIPRIEIPVMPEININVPTIDVRMPRIRVRTPRVRVFRTERGPI*
Ga0079215_1050801213300006894Agricultural SoilTAIDGEAVDSPGDIARAINRKKEGVVTLTVIRNKSQQTIQVTPAEGGFSGTMGGPQIGRRIVIPRIVVPSIPDIDIEMPRIRVPAMPAININMPRVRVRTPRLRVLRTERGPI*
Ga0079218_1046749913300007004Agricultural SoilVITAIDGEAVDSPGDIARAINRKKEGAVTLTVIRNRSQQTFQVTPAEGGGFSGSVDQPQIGRRIVIPRIEIPAIPDIDIQLPAIRTPRVRVPAIDVQMPRIRVTPARVRLSRGERGPI*
Ga0079218_1294001713300007004Agricultural SoilKTQQTIRVTPRDGSGVSGTTTQPQLGRRIVIPRIEIPTPEIDIEMPRIVIPAIPSININLPRIRVTPRARVRTAQGPI*
Ga0075435_10178511823300007076Populus RhizosphereLTVIRNKAQQTIHVTPREGGFSGAMGQPQIGRRIVIPRIEIPTMPDIEIAMPRISIPSIPAIDIRMPPIRVSPRIRVIRSERGPI*
Ga0105247_1160607913300009101Switchgrass RhizosphereKKEGDVTLTIIRNKSQQTIHVSPREGGGFSGTLGNPQVGRRIVIPRIEIPSIPDIDIAMPNIVIPSIPTINVQLPRIRVTPRVRVRGPQGPI*
Ga0105247_1182305623300009101Switchgrass RhizosphereVSLTIVRNKSQQTINVTPRQGGFTGGADGPAVGRRIVIPRIEIPTMPDIQIAMPRISIPSIPAINIEMPPIRVSPRVRVIRSERGPI*
Ga0114129_1208373623300009147Populus RhizosphereIRNKSQQTIQVTPAEGGGFSGTTGRPQIGRRIVIPRIEIPTIPDIDIEMRTIQVPAVPTIDVKLPRVRVRTPRVRVLRGERGPI*
Ga0111538_1409880213300009156Populus RhizosphereDGEAIDSPGDISRAINRKKDGDVTLTIIRNKSQQTIHVTPREGSGFSRTVGQPDLGRRIVIPRIEIPDVDIVMPRIVIPSIPSINVNLPRVRVNIPRVRVRSAQGPI*
Ga0075423_1145205423300009162Populus RhizosphereSRAINRKKDGDVSLTIIRNKSQQTIRVTPREGGGFSGTMGEPQIGRQIVIPRIEIPTVPDIDISMPRIEIPSIPSINIEMPRVRVRPGARIRTVQGPI*
Ga0105248_1312896813300009177Switchgrass RhizosphereTAVDGEAVDSPGDISRSINRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTTGNPQIGRRIVIPRIEIPTIPDIEIAMPDIVVPSTPTINVRMPQIRVPMPRIRVTPRVRGSQGPI*
Ga0105237_1002554173300009545Corn RhizosphereRVINRKKEGDVTLTVVRNKTQQTIHVTPREGGFSGTMGQPQVGRRIVIPRIEIPTIPDIDIVVPAIDIQMPRVRVNVPRVRVIRSERGPI*
Ga0105249_1351530913300009553Switchgrass RhizosphereVINRKKEGDITLTVIRNKSQQMIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMDIDIAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI*
Ga0126305_1024413023300010036Serpentine SoilGEAVDSPGDISRVINRKKDGDIMLTIIRNKSQQTIRVTPREGGGFPGTLGQPQVGRRIVIPRVVIPDIEIMMPRIVIPAIPAINIEMPRVRVRPRARVLRTERGPI*
Ga0126304_1017747433300010037Serpentine SoilLTIIRNKSQQTIRVTPREGGGFPGTWGQSQIGRRIVIPRVVIPDIEIMMPRIVIPAIPAINIDMPRVRVRPRARVLRTERGPI*
Ga0126315_1032979623300010038Serpentine SoilGDVTLTVIRNKSQQTIRVTPREGGFSGADDRPQVGRRIVIPRIEIPTMPDIEIAMPTITFPSIPAVNIKMPPIRVTTPRVRVIRSERGPI*
Ga0126312_1078859413300010041Serpentine SoilRNKAQQTIRVTPREGGFSGIFGQPQIGRRIVIPRVEIPDIDIAMPRIVIPSIPAINIEMPRVRVTPRARVLRTERGPI*
Ga0126314_1051338623300010042Serpentine SoilSQQTIRVTPREGGGFPGALGQPQVGRRIVIPRVVIPDIEIMMPRIVIPAIPAINIDMPRVRVRPRARVLRTERGPI*
Ga0126314_1142087713300010042Serpentine SoilDVTLTIIRNKSQQTIRVTPGEARLRGTLDGAQIGRRIVIPRIEIPVIPEIDIAMPNIIIPSIPNVNVRMPRIRVTPRIRVRGPQGPI*
Ga0126376_1018236133300010359Tropical Forest SoilNRKKEGDVTLTVVRNKAQQTIHVTPREGGLSGTMGQPQIGRRIVIPRIEIPTMPDIDIAVPAIDIQMPRVRVNVPRVRVIRSERGPI*
Ga0134128_1179824613300010373Terrestrial SoilKKEGDITLTVIRNKSQQMIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMDIDIAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI*
Ga0134128_1258796013300010373Terrestrial SoilSPGDISRAINRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPAIDIDVAMPNIVIPTIPTINIQMPRIRVTPRVRVRGPQGPI*
Ga0105239_1065633623300010375Corn RhizosphereAIDSPGDISRVINRKKEGDITLTVIRNKSQQTIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMPDIEIAMPTINIPSVPAVNVKMPPIRVTMPRVRVIRSERGPI*
Ga0105239_1264275523300010375Corn RhizosphereGDISRAINRKKEGDVALTVIRNKAQQTIRVMPRDGGFSGGMGQPQIGRRIVIPRIEIPNIPDVEVAMPRIVIPAIPTININLPRVRVMPRLRIRNEQGPI*
Ga0105239_1307796913300010375Corn RhizosphereDGEAVDSPGDISRVINRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTTGNPQVGRRIVIPRIEIPTIPDIEIAMPDIVVPSTPTINVRMPQIRVPMPRIRVTPRVRGPQGPI*
Ga0134124_1196582313300010397Terrestrial SoilVITAIDGEEVDSSGDISRVINSKKDGDVSLTIIRNKSQQTIRVTPREGGGFSRTLGQPQIGRQIVIPRIEIPMPEIDVAMPRIVIPSVPSINIEMPRIRVTPRIRARGVQGPI*
Ga0134124_1272621813300010397Terrestrial SoilKKEGDVTLTVVRNKTQQTIHVTPREGGFSGTMGQPQVGRRIVIPRIEIPTIPDIDIVVPAIDIQMPRVRVNVPRVRVIRSERGPI*
Ga0134127_1017171013300010399Terrestrial SoilAVDSPGDISRAINSKKEGNVTLTVIRNKSQQTFSVTPIEGGGLSGPAGRPQIGRRIVIPRIEIPTMPDIDIEMPRITIPSIPAVNIRMPPIRVRMPRVRVSPSERGPI*
Ga0134127_1089721713300010399Terrestrial SoilVITAVDGEAVDSPGDISRVINRKKEGDVTLTIVRNKSQQTIHVTPREGVGYSGTMGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI*
Ga0134127_1151302113300010399Terrestrial SoilINRKKEGDITLTVIRNKSQQTIHVTPREGGFSGAADRPQVGRRIVVPRIVIPTMPDIEIAMPTIDIPSVPAVNVKMPPIRVTMPRVRVIRSERGPI*
Ga0134122_1050634923300010400Terrestrial SoilITLTVIRNKSQQTIQVTPREGGFSGGMGQPQVGRRIVIPRIEIPTLPDIEIAMPTINIPSVPAVNVKMPPIRVTMPRVRVIRSERGPI*
Ga0134122_1320184113300010400Terrestrial SoilKKEGDVTLTIIRNRAQLTIRVTPKQVGGFSGTVSPPEIGRRIVIPRIEIPTPEIEVSMPRIVIPSIPSINIELPRVRVTPRVRVVRTSQGPI*
Ga0134123_1242135913300010403Terrestrial SoilTLTVIRNKSQQTIHVTPREGGFSGGMGQPQVGRRIVVPRIEIPTMDIDIAMPRIVIPTIPTINVEMPRIRVTPRVRVIRSERGPI*
Ga0164300_1056575223300012951SoilDSPGDISRVINRKKEGDVTLTIVRNKSQQTIHVTPREGGVSGGMGQPQSGRRIVIPRIEIPMPDINITVPAVNIKMPPIRVIRSERGPI*
Ga0164303_1072073613300012957SoilGDISHVINRKKEGEVTLTVIRNKSQQSIRVMPREGGASVTMGNPQVGRRIVIPRIEIPTIPDIDISLPNIVVPAINVQMPRIRVTPRIRTRGVMGPI*
Ga0164301_1183702323300012960SoilSRVINRKKEGDVTLTIVRNKSQQTIHVTPREGGVSGGMGQPQSGRRIVIPRIEIPMPDINITVPAVNIKMPPIRVIRSERGPI*
Ga0157378_1280990113300013297Miscanthus RhizosphereRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPAIPDIDIAMPNIVIPSIPTINVQLPRIRVTPRVRVRGPQGPI*
Ga0157372_1104300923300013307Corn RhizosphereIDSPGDISRVINRKKEGDITLTVTRNKSQQTIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMPDIEIAMPTINIPSVPAVNVKMPPIRVTMPRVRVIRSERGPI*
Ga0120188_100331413300013760TerrestrialKAQQTIRVTPKEGGGFSGTMSQPEIGRRIVIPRIEIPMPEIDIEMPRITIPTIPSVNITLPRVRVTRPRLRTVNGPI*
Ga0157376_1048803213300014969Miscanthus RhizosphereRVINRKKEGDVTLTIIRNKSQQTIHVTPREGVGYSGTMGNPQIGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI*
Ga0132258_1059894043300015371Arabidopsis RhizosphereGDVTLTIIRNKSQQTIHVTPREGGGFSGTPGNPQIGRRIVIPRIEIPTIPDIDIAMPNIVIPSIPTINVQLPRIRVTPRVRVRGPQGPI*
Ga0132256_10071164813300015372Arabidopsis RhizosphereEPVDSPGDISRVINRKKEGDVTLTIIRNKSQQTIHVTPREGGGGFPGTMGNPQIGRRIVIPRIEIPTVDIDIAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI*
Ga0132257_10409416313300015373Arabidopsis RhizosphereINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSRTLGQPQIGRQIVIPRIEIPMPEIDVAMPRIVIPSVPSINIEMPRIRVTPRIRARGVQGPI*
Ga0190265_1377727623300018422SoilIRNKAQQTIRVAPRDGSGVSGTTTQPQMGRRIVIPRIEIPTPEIYIAMPRIVIPAIPSINIDLPRVRVTPRARVRTTQGPI
Ga0190268_1034642213300018466SoilETVDSSGDLSRVINRKKEGDVTLTIIRNKSQQTIRVTPKEGGGFSGTITQPQIGRRIVIPRIEIPMPEIDIAMPSIVVPSIPSVNINLPRVRVTPRVMVIRRGQGPI
Ga0190264_1204549213300019377SoilITAIDGEAVDSTGDISRIVNRKKEGDVSLTVIRNKSQQTIRVTPKEGGGFTGTFGQPTIGRRIVIPRVEIPMPEVNISMPRIVIPTVPTIDIQMPRVRVRTPRVRVVRGEQGPI
Ga0182009_1010635433300021445SoilMINRKKEGDVTLTVVRNKAQQTIHVTPREGGLSGMGQPQTGRRIVIPRIEIPTMPDIDIAVPAIDIQMPRVRVNVPRVRVVRSERGPI
Ga0207713_125063713300025735Switchgrass RhizosphereVINRKKEGDVTLTIIRNKSQQTIHVTPREGVGYSGTMGNPQTGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI
Ga0207643_1036903213300025908Miscanthus RhizosphereTIIRNKSQQTIHVTPREGVGTGTMGNPQIGRRIVIPRIVIPTIPDIDVVMPNIVIPSIPAINVQMPRIRVMPRVRSRGPQGPI
Ga0207695_1075059523300025913Corn RhizosphereEAVDSSGDVSRVINNKKEGDVTLTIIRNRAQQTIRVTPKQGGGFSGTVSPPEIGRRIVIPRIEIPTPEIEVSMPRIVIPSIPSINIELPRVRVTPRVRVVRTSQGPI
Ga0207662_1108763613300025918Switchgrass RhizosphereGITAIDGEEVDSSGDISRVINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSRTLGQPQIGRQIVIPRIEIPMPEIDVAMPRIVIPSVPSINIEMPRIRVTPRIRARGVQGPI
Ga0207701_1113595613300025930Corn, Switchgrass And Miscanthus RhizosphereRAINRKKEGDVTLTVIRNKSQQTIRVTPREGRVSGTLGRPTVGRRIVIPRIEIPTPEIDIAMPSIVIPSIPSVNINMPRIRVMPRIRARGVMGPI
Ga0207686_1003545743300025934Miscanthus RhizospherePREGGGFGGSMGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRITPRVRVRGPQGPI
Ga0207711_1146468313300025941Switchgrass RhizosphereINRKKEGDVTLTVIRNKSQQTIRVTPREGGVSRTLGRPTVGRRIVIPRIEIPTPEIDIAMPSIVIPSIPSVNINMPRIRVMPRIRARGVMGPI
Ga0207640_1171510813300025981Corn RhizosphereAVDGEAIDSPGDIARAINRKKEGEVTLTIIRNKSQQTIHVTPREGGFSGTMGQPQVGRRIVIPRIEIPTIPDIDIVVPAIDIQMPRVRVNVPRVRVIRSERGPI
Ga0207641_1153596723300026088Switchgrass RhizosphereINRKKEGDVTLTIIRNKSQQTIHVTPREGGGFPGTINNPQTGRRIVIPRIEIPTVDIDIAMPNIVIPSIPTINIQMPRIRVMPRVRVRGPQGPI
Ga0207641_1159225113300026088Switchgrass RhizosphereDISRAINRKKEGDITLTVIRNKSQQTIRVTPREGGFSGTTDRPQVGRRIVVPRIEIPIMPDIEIAMPRITIPSIPAVDIRMPPIRVSPRVRVIRSERGPI
Ga0207641_1246744613300026088Switchgrass RhizosphereDISRVINRKKEGDVTLTIVRNKSQQTIHVTPREGGGFSGTLGNPQIGRRIVIPRIEIPTIDIDVAMPNIVIPTIPTINVQMPRIRVTPRVRVRGPQGPI
Ga0207648_1044608713300026089Miscanthus RhizosphereINSKKEGDVSLTIIRNKSQQTIRVTPREGGGFSGRLGQPQIGRQIVIPRIEIPDINIAMPKVVVPAMTIPSININMPRIRVMPRARIRTVNGPI
Ga0207676_1182110013300026095Switchgrass RhizosphereINRKKEGDVTLTVIRNKSQQAIRVTPREGNFSRTLGRPTVGRQIVIPRIEIPTPEIDIAMPSIVIPSIPSVNINMPHIRITPRVIRTAQGPI
Ga0207675_10254959123300026118Switchgrass RhizosphereTVIRNKSQQMIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMDIDIAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI
Ga0209027_124973213300026300Grasslands SoilINHKKDGDVTLTIVRNKAQQTIRVTPREGGFSGTMGQPQIGRRIVIPRIVIPTIPDIDIAMPDIVIPSINIEMPRVRVTPRARVVRTDQGPI
Ga0209177_1046847113300027775Agricultural SoilIDSPGDIARVINRKKEGDVALTVVRNKTQQTIQVTPRQGGSRGTMDQPQVGRRIVIPRIEIPTMPDIDIAVPAIDIQMPRVRVNVPRVRVITAERGPI
Ga0209382_1106945413300027909Populus RhizosphereELARVINRKKEGEVTLTIIRNKSQQTIRVTPKEGGGFSGTTTEPELGRRIVIPRIEIPMPEIDIAMPRIVIPSIPSININLPRVRVTPRVRVVRTGQGPI
Ga0310813_1076072023300031716SoilLTVIRNKSQQMIHVTPREGGFSGGMGQPQVGRRIVIPRIEIPTMDIDIAMPRIVIPTIPAINVEMPRIRVTPRVRTIRSERGPI
Ga0307405_1180060613300031731RhizosphereQQTIRVTPKQGGGFSGTVSPPEIGRRIVIPRIEIPTPEIEVSMPRIVIPSIPSINIELPRVRVTPRVRVVRTSQGPI
Ga0307407_1024128723300031903RhizosphereKKDGDVTLTVIRNKSQQTIRVTPSEGSGFPGTLGRPQVGRRIVIPRIEIPTPEIDITMPSIVIPSIPSVNVNLPRIRVTPRIRTRGVMGPI
Ga0307407_1119907723300031903RhizosphereIIRNKSQQTIRVTPREGGFSGTLGHPQTGRRIVIPRVEIPDIDIAMPRIVIPSIPAINIDLPRVRVRPRARVLRTERGPI


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.