Metagenome / Metatranscriptome Family F083839

Basic Information
Family ID	F083839
Family Type	Metagenome / Metatranscriptome
Number of Sequences	112
Average Sequence Length	40 residues
Representative Sequence	MSVERRGQAIRVMINLANWQQEEPTGCGGGRQLSMDGTSRV
Number of Associated Samples	105
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	91.07 %
% of genes near scaffold ends (potentially truncated)	93.75 %
% of genes from short scaffolds (< 2000 bps)	95.54 %
Associated GOLD sequencing projects	104
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.38

Most Common Taxonomy
Group	Unclassified (66.071 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil (14.286 % of family members)
Environment Ontology (ENVO)	Unclassified (19.643 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (56.250 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 28.99% β-sheet: 0.00% Coil/Unstructured: 71.01%
Feature Viewer

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Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF08388	GIIM	1.79
PF01139	RtcB	0.89
PF12543	DUF3738	0.89
PF01695	IstB_IS21	0.89
PF13701	DDE_Tnp_1_4	0.89
PF14559	TPR_19	0.89
PF00078	RVT_1	0.89
PF13751	DDE_Tnp_1_6	0.89
PF01526	DDE_Tnp_Tn3	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG1484	DNA replication protein DnaC	Replication, recombination and repair [L]	0.89
COG1690	RNA-splicing ligase RtcB, repairs tRNA damage	Translation, ribosomal structure and biogenesis [J]	0.89
COG4644	Transposase and inactivated derivatives, TnpA family	Mobilome: prophages, transposons [X]	0.89

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
All Organisms	root	All Organisms	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
cellular organisms	root	All Organisms → cellular organisms	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	33.93 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	13.39 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	10.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	9.82 %
delta/epsilon subdivisions	subphylum	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Deltaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	2.68 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Desulfobacterales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Desulfobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
unclassified Desulfobacteraceae	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae	1.79 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	66.07 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	9.82 %
Desulfobacteraceae bacterium	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1.79 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005332\|Ga0066388_108819348	Not Available	500	Open in IMG/M
3300005436\|Ga0070713_100745788	All Organisms → cellular organisms → Bacteria	937	Open in IMG/M
3300005587\|Ga0066654_10845924	Not Available	522	Open in IMG/M
3300005607\|Ga0070740_10110142	All Organisms → cellular organisms → Bacteria → Proteobacteria	1237	Open in IMG/M
3300005610\|Ga0070763_10282526	All Organisms → cellular organisms → Bacteria	908	Open in IMG/M
3300005764\|Ga0066903_109148637	All Organisms → cellular organisms → Bacteria	500	Open in IMG/M
3300005938\|Ga0066795_10006981	All Organisms → cellular organisms → Bacteria	2980	Open in IMG/M
3300006853\|Ga0075420_100544933	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1002	Open in IMG/M
3300006860\|Ga0063829_1447573	Not Available	548	Open in IMG/M
3300009522\|Ga0116218_1554387	Not Available	511	Open in IMG/M
3300009581\|Ga0115600_1026904	Not Available	542	Open in IMG/M
3300009638\|Ga0116113_1115372	Not Available	655	Open in IMG/M
3300009645\|Ga0116106_1211400	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300010043\|Ga0126380_10168279	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1428	Open in IMG/M
3300010043\|Ga0126380_10541917	Not Available	903	Open in IMG/M
3300010081\|Ga0127457_1059118	Not Available	574	Open in IMG/M
3300010088\|Ga0127476_1109615	Not Available	546	Open in IMG/M
3300010097\|Ga0127501_1011918	Not Available	503	Open in IMG/M
3300010097\|Ga0127501_1097928	Not Available	566	Open in IMG/M
3300010107\|Ga0127494_1070565	Not Available	549	Open in IMG/M
3300010108\|Ga0127474_1036587	Not Available	535	Open in IMG/M
3300010109\|Ga0127497_1109369	Not Available	508	Open in IMG/M
3300010124\|Ga0127498_1022599	Not Available	550	Open in IMG/M
3300010141\|Ga0127499_1107273	Not Available	596	Open in IMG/M
3300010146\|Ga0126320_1251358	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	570	Open in IMG/M
3300010336\|Ga0134071_10444593	Not Available	664	Open in IMG/M
3300010360\|Ga0126372_10455574	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1187	Open in IMG/M
3300010360\|Ga0126372_11338725	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	746	Open in IMG/M
3300010366\|Ga0126379_13329063	Not Available	538	Open in IMG/M
3300010859\|Ga0126352_1262465	Not Available	554	Open in IMG/M
3300010860\|Ga0126351_1167558	Not Available	552	Open in IMG/M
3300010862\|Ga0126348_1326406	Not Available	534	Open in IMG/M
3300010863\|Ga0124850_1127178	Not Available	636	Open in IMG/M
3300011039\|Ga0138593_120859	Not Available	573	Open in IMG/M
3300011045\|Ga0138598_124656	Not Available	552	Open in IMG/M
3300011082\|Ga0138526_1043104	Not Available	573	Open in IMG/M
3300011120\|Ga0150983_10647236	Not Available	552	Open in IMG/M
3300011120\|Ga0150983_15203139	Not Available	521	Open in IMG/M
3300012376\|Ga0134032_1261348	Not Available	534	Open in IMG/M
3300012393\|Ga0134052_1230605	Not Available	581	Open in IMG/M
3300012396\|Ga0134057_1018779	Not Available	585	Open in IMG/M
3300012402\|Ga0134059_1304891	Not Available	606	Open in IMG/M
3300012405\|Ga0134041_1104828	Not Available	541	Open in IMG/M
3300012410\|Ga0134060_1050329	Not Available	559	Open in IMG/M
3300012469\|Ga0150984_110087417	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	548	Open in IMG/M
3300012533\|Ga0138256_10718593	Not Available	778	Open in IMG/M
3300014839\|Ga0182027_11360532	Not Available	705	Open in IMG/M
3300015360\|Ga0163144_10080681	All Organisms → cellular organisms → Bacteria	5362	Open in IMG/M
3300015360\|Ga0163144_10314957	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1973	Open in IMG/M
3300016387\|Ga0182040_11743431	All Organisms → cellular organisms → Bacteria	532	Open in IMG/M
3300016698\|Ga0181503_1302636	Not Available	544	Open in IMG/M
3300016701\|Ga0181509_1351706	Not Available	565	Open in IMG/M
3300016702\|Ga0181511_1289894	Not Available	595	Open in IMG/M
3300017940\|Ga0187853_10305148	Not Available	719	Open in IMG/M
3300018009\|Ga0187884_10391662	Not Available	559	Open in IMG/M
3300018043\|Ga0187887_10264605	All Organisms → cellular organisms → Bacteria → Acidobacteria	1017	Open in IMG/M
3300019233\|Ga0184645_1080853	Not Available	548	Open in IMG/M
3300019254\|Ga0184641_1040510	Not Available	562	Open in IMG/M
3300019257\|Ga0180115_1172158	All Organisms → cellular organisms → Bacteria → Proteobacteria	606	Open in IMG/M
3300019259\|Ga0184646_1380538	All Organisms → cellular organisms → Bacteria → Proteobacteria	566	Open in IMG/M
3300019270\|Ga0181512_1511655	Not Available	623	Open in IMG/M
3300019278\|Ga0187800_1224163	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	549	Open in IMG/M
3300019279\|Ga0184642_1687403	Not Available	583	Open in IMG/M
3300020057\|Ga0163151_10012930	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria	8235	Open in IMG/M
3300020057\|Ga0163151_10486790	Not Available	600	Open in IMG/M
3300020063\|Ga0180118_1036116	Not Available	566	Open in IMG/M
3300020180\|Ga0163155_10285237	Not Available	782	Open in IMG/M
3300020186\|Ga0163153_10319720	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	700	Open in IMG/M
3300020195\|Ga0163150_10322743	Not Available	744	Open in IMG/M
3300020579\|Ga0210407_10886141	Not Available	685	Open in IMG/M
3300021286\|Ga0179583_1032605	All Organisms → cellular organisms → Bacteria → Proteobacteria	555	Open in IMG/M
3300021329\|Ga0210362_1579630	Not Available	584	Open in IMG/M
3300021404\|Ga0210389_11074124	Not Available	623	Open in IMG/M
3300022195\|Ga0222625_1155225	All Organisms → cellular organisms → Bacteria	572	Open in IMG/M
3300022498\|Ga0242644_1041446	Not Available	523	Open in IMG/M
3300022504\|Ga0242642_1076303	All Organisms → cellular organisms → Bacteria → Proteobacteria	559	Open in IMG/M
3300022506\|Ga0242648_1072954	Not Available	561	Open in IMG/M
3300022525\|Ga0242656_1110093	All Organisms → cellular organisms → Bacteria → Proteobacteria	548	Open in IMG/M
3300022708\|Ga0242670_1053904	All Organisms → cellular organisms → Bacteria → Proteobacteria	580	Open in IMG/M
3300022713\|Ga0242677_1056482	All Organisms → cellular organisms → Bacteria → Proteobacteria	588	Open in IMG/M
3300022726\|Ga0242654_10315451	Not Available	579	Open in IMG/M
3300025461\|Ga0208851_1006747	Not Available	2619	Open in IMG/M
3300025750\|Ga0209747_1195311	Not Available	616	Open in IMG/M
3300025862\|Ga0209483_1237602	Not Available	709	Open in IMG/M
3300026298\|Ga0209236_1161452	Not Available	928	Open in IMG/M
3300027527\|Ga0209684_1051283	Not Available	637	Open in IMG/M
3300027663\|Ga0208990_1196821	Not Available	513	Open in IMG/M
3300028863\|Ga0302218_10023527	All Organisms → cellular organisms → Bacteria	1957	Open in IMG/M
3300029701\|Ga0222748_1087799	All Organisms → cellular organisms → Bacteria → Proteobacteria	589	Open in IMG/M
3300029817\|Ga0247275_1116983	Not Available	693	Open in IMG/M
3300029907\|Ga0311329_10308652	All Organisms → cellular organisms → Bacteria	1146	Open in IMG/M
3300030730\|Ga0307482_1233456	Not Available	572	Open in IMG/M
3300030913\|Ga0265759_109042	Not Available	553	Open in IMG/M
3300030913\|Ga0265759_109079	Not Available	552	Open in IMG/M
3300030975\|Ga0099845_1553260	Not Available	580	Open in IMG/M
3300030987\|Ga0308155_1023058	Not Available	585	Open in IMG/M
3300031092\|Ga0308204_10215752	Not Available	606	Open in IMG/M
3300031093\|Ga0308197_10230879	All Organisms → cellular organisms → Bacteria → Proteobacteria	647	Open in IMG/M
3300031096\|Ga0308193_1073289	All Organisms → cellular organisms → Bacteria → Proteobacteria	551	Open in IMG/M
3300031421\|Ga0308194_10291916	All Organisms → cellular organisms → Bacteria → Proteobacteria	562	Open in IMG/M
3300031770\|Ga0318521_10821954	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	567	Open in IMG/M
3300031912\|Ga0306921_12330995	Not Available	560	Open in IMG/M
3300031942\|Ga0310916_10520746	All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Desulfobacterales → Desulfobacteraceae → unclassified Desulfobacteraceae → Desulfobacteraceae bacterium	1013	Open in IMG/M
3300031962\|Ga0307479_10994556	Not Available	808	Open in IMG/M
3300031997\|Ga0315278_12142375	Not Available	518	Open in IMG/M
3300032042\|Ga0318545_10204277	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	707	Open in IMG/M
3300032070\|Ga0315279_10529366	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	764	Open in IMG/M
3300032261\|Ga0306920_103785494	Not Available	553	Open in IMG/M
3300032397\|Ga0315287_10079587	All Organisms → cellular organisms → Bacteria	3681	Open in IMG/M
3300034659\|Ga0314780_165963	Not Available	555	Open in IMG/M
3300034661\|Ga0314782_149281	Not Available	572	Open in IMG/M
3300034667\|Ga0314792_199283	Not Available	562	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	97.32%
Host-Associated	Host-Associated	1.79%
Engineered	Engineered	0.89%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	71.43%
Aquatic	Environmental → Aquatic	25.89%
Plants	Host-Associated → Plants	1.79%
Wastewater	Engineered → Wastewater	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	69.64%
Freshwater	Environmental → Aquatic → Freshwater	25.00%
Peat	Environmental → Terrestrial → Peat	1.79%
Rhizosphere	Host-Associated → Plants → Rhizosphere	1.79%
Marine	Environmental → Aquatic → Marine	0.89%
Activated Sludge	Engineered → Wastewater → Activated Sludge	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	58.93%
Lake	Environmental → Aquatic → Freshwater → Lake	8.93%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	8.04%
Loam	Environmental → Terrestrial → Soil → Loam	8.04%
Sediment	Environmental → Aquatic → Freshwater → Sediment	7.14%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.68%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.79%
Groundwater	Environmental → Aquatic → Freshwater → Groundwater	0.89%
Intertidal Zone	Environmental → Aquatic → Marine → Intertidal Zone	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	35.71%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	16.07%
Unclassified	Environmental → Aquatic → Freshwater → Sediment → Unclassified	7.14%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	7.14%
Unclassified	Environmental → Aquatic → Freshwater → Lake → Unclassified	6.25%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	6.25%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment	2.68%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.68%
Agricultural	Environmental → Terrestrial → Soil → Unclassified → Agricultural	2.68%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	1.79%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	1.79%
Permafrost	Environmental → Terrestrial → Soil → Wetlands → Permafrost	1.79%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.79%
Unclassified	Environmental → Aquatic → Freshwater → Groundwater → Unclassified	0.89%
Estuary	Environmental → Aquatic → Marine → Intertidal Zone → Estuary	0.89%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%
Unclassified	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	14.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	11.61%
Groundwater Sediment	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment	6.25%
Freshwater Microbial Mat	Environmental → Aquatic → Freshwater → Lake → Unclassified → Freshwater Microbial Mat	6.25%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	6.25%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	6.25%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.46%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.46%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.57%
Boreal Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Boreal Forest Soil	3.57%
Sediment	Environmental → Aquatic → Freshwater → Lake → Sediment → Sediment	2.68%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	2.68%
Soil	Environmental → Terrestrial → Soil → Unclassified → Agricultural → Soil	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	2.68%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	1.79%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.79%
Wetland	Environmental → Aquatic → Freshwater → Sediment → Unclassified → Wetland	0.89%
Soil	Environmental → Aquatic → Freshwater → Groundwater → Unclassified → Soil	0.89%
Estuarine	Environmental → Aquatic → Marine → Intertidal Zone → Estuary → Estuarine	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	0.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	0.89%
Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Peatland	0.89%
Fen	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Fen	0.89%
Soil	Environmental → Terrestrial → Soil → Wetlands → Permafrost → Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	0.89%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	0.89%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	0.89%
Bog	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Bog	0.89%
Populus Rhizosphere	Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere	0.89%
Avena Fatua Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere	0.89%
Active Sludge	Engineered → Wastewater → Activated Sludge → Unclassified → Unclassified → Active Sludge	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005587	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103	Environmental	Open in IMG/M
3300005607	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen15_06102014_R2	Environmental	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005938	Permafrost soil microbial communities from the Arctic, to analyse light accelerated degradation of dissolved organic matter (DOM) - Permafrost soil replicate 2 DNA2013-191	Environmental	Open in IMG/M
3300006853	Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD4	Host-Associated	Open in IMG/M
3300006860	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 63 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300009581	Wetland microbial communities from Old Woman Creek Reserve in Ohio, USA - Mud_9_15_A (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300009638	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_10_10	Environmental	Open in IMG/M
3300009645	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_6_40	Environmental	Open in IMG/M
3300010043	Tropical forest soil microbial communities from Panama - MetaG Plot_26	Environmental	Open in IMG/M
3300010081	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010088	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_24_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010097	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010107	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010108	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_5_8_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010109	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010124	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_4_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010141	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_40_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010146	Soil microbial communities from California, USA to study soil gas exchange rates - JR-CA-SND metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300010859	Boreal forest soil eukaryotic communities from Alaska, USA - C5-5 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010860	Boreal forest soil eukaryotic communities from Alaska, USA - C5-2 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010862	Boreal forest soil eukaryotic communities from Alaska, USA - C4-4 Metatranscriptome (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300010863	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (PacBio error correction)	Environmental	Open in IMG/M
3300011039	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 20 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011045	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 66 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011082	Peat soil microbial communities from Weissenstadt, Germany - Metatranscriptome 4 (Metagenome Metatranscriptome) (version 2)	Environmental	Open in IMG/M
3300011120	Combined assembly of Microbial Forest Soil metaT	Environmental	Open in IMG/M
3300012376	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012393	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_1 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012396	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_0_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012402	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_8_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012405	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_20cm_5_24_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012410	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Glu_40cm_5_16_2 metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300012469	Combined assembly of Soil carbon rhizosphere	Host-Associated	Open in IMG/M
3300012533	Active sludge microbial communities from wastewater in Klosterneuburg, Austria - KNB2014incub_MG	Engineered	Open in IMG/M
3300014839	Permafrost microbial communities from Stordalen Mire, Sweden - 712E1D metaG (Illumina Assembly)	Environmental	Open in IMG/M
3300015360	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.BULKMAT1	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016698	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin02_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016701	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin10_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300016702	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin11_30_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300017940	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_6_100	Environmental	Open in IMG/M
3300018009	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_20_40	Environmental	Open in IMG/M
3300018043	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_7_10	Environmental	Open in IMG/M
3300019233	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_60 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019254	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019257	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019259	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019270	Metatranscriptome of peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin17_10_metaT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019278	Metatranscriptome of tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_BV02_MP12_20_MT (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300019279	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020057	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP5.IB-2	Environmental	Open in IMG/M
3300020063	Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT730_16_1Ra (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300020180	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.SP4.G1	Environmental	Open in IMG/M
3300020186	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.MP6.IB-1	Environmental	Open in IMG/M
3300020195	Freshwater microbial mat bacterial communities from Lake Vanda, McMurdo Dry Valleys, Antarctica - Oligotrophic Lake LV.19.P2.IB	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300021286	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_08_16RNAfungal (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021329	Metatranscriptome of estuarine sediment microbial communities from the Columbia River estuary, Oregon, United States ? S.625 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300022195	Metatranscriptome of groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM2_5 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300022498	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-32-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022504	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-2-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022506	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-26-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022525	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-H-4-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022708	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022713	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-O (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300022726	Metatranscriptome of forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Native-BW-C-30-M (Metagenome Metatranscriptome) (v2)	Environmental	Open in IMG/M
3300025461	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 415-2 shallow-092012 (SPAdes)	Environmental	Open in IMG/M
3300025750	Arctic peat soil from Barrow, Alaska - Barrow Graham LP Ref core NGADG0011-311 (SPAdes)	Environmental	Open in IMG/M
3300025862	Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-A (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300027527	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 6 MoBio (SPAdes)	Environmental	Open in IMG/M
3300027663	Forest soil microbial communities from El Dorado National Forest, California, USA - Mediterranean Blodgett CA Ref_M3 (SPAdes)	Environmental	Open in IMG/M
3300028863	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_1	Environmental	Open in IMG/M
3300029701	Metatranscriptome of lab incubated forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300029817	Soil microbial communities from Marcell Experimental Forest, Minnesota, USA - Bog25	Environmental	Open in IMG/M
3300029907	I_Bog_N1 coassembly	Environmental	Open in IMG/M
3300030730	Metatranscriptome of hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030913	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSA6 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300030975	Forest soil eukaryotic communities from Alaska, USA, for a soil warming experiment in a boreal forest - Alaskan Soil AK pilot (Eukaryote Community Metatranscriptome)	Environmental	Open in IMG/M
3300030987	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_144 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031092	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_367 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031093	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031096	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031421	Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_195 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031962	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM4C_515	Environmental	Open in IMG/M
3300031997	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_0	Environmental	Open in IMG/M
3300032042	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f26	Environmental	Open in IMG/M
3300032070	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G06_20	Environmental	Open in IMG/M
3300032261	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)	Environmental	Open in IMG/M
3300032397	Sediment microbial communities from Yellowstone Lake, YNP, Wyoming, USA - YL17G11_0	Environmental	Open in IMG/M
3300034659	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034661	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R3 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300034667	Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0066388_1088193481	3300005332	Tropical Forest Soil	VEQRGQVIRVPITLVNWQQEESTDRGEGRQLFMDDTSRVSRE
Ga0070713_1007457882	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MSVERRGQVIRVMTQLVNWQQEEPTDRGEGRQLFMNDKSRVSREAQSTVP*
Ga0066654_108459242	3300005587	Soil	MSVEGRGWATRVGIDLANWQQEEPTGCGGGRQLSMDGTSRV
Ga0070740_101101421	3300005607	Surface Soil	LLSFYSGVKKRGQAIRVMITLVNWQQEEPIGCGGGRQLSMDG
Ga0070763_102825261	3300005610	Soil	VERRGQAIRVMINKANWQQEEPTGCGGGRQLSMDGTSRVTGDC
Ga0066903_1091486372	3300005764	Tropical Forest Soil	MERRERVIRVIPTLVNRQREEPTGCDGERQLSMDGTSRVSREAQ
Ga0066795_100069813	3300005938	Soil	MPVERRGQAIRVMINLVNWQQEEPTGYGGGRQLSMDGTSRVS*
Ga0075420_1005449331	3300006853	Populus Rhizosphere	MPVEQRGQAIRVMINLVNWQQDEPTGCGGGRQLSM
Ga0063829_14475732	3300006860	Peatlands Soil	MPVERRRQAIRVMIALVNWQQEEPNGCGGGQQISLNGTSPVNREIY
Ga0116218_15543871	3300009522	Peatlands Soil	MSVERRGQAIRVMITLVNWQQEEPNGCGGGRQLSMDGTS
Ga0115600_10269041	3300009581	Wetland	MPVERRGQAIRVRINLVNWQQEEPTGSGGGRQLSMD
Ga0116113_11153721	3300009638	Peatland	MPAEQRGQVIRVMIALVNWQQEEPNGCGGGQQLLLN
Ga0116106_12114001	3300009645	Peatland	MSVERRGQAIRVMVNLANWQQEEPTDCGGGRHLSMDGTRR
Ga0126380_101682791	3300010043	Tropical Forest Soil	MERRGRVIRVIPPLVNRQREEPTGCDGGRQLSMNGT
Ga0126380_105419171	3300010043	Tropical Forest Soil	MSVERRGQVIRVPIMLVNWQQEEPTDCGEGRQLFMDDTSRVSREAQARF
Ga0127457_10591181	3300010081	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVS
Ga0127476_11096151	3300010088	Grasslands Soil	MSVERRGQAIRVMVNLANWQQEELTGCGGARQLSM
Ga0127501_10119181	3300010097	Grasslands Soil	MSVERRGQAIRVMVNLANWQQEELTGCGGARQLSMD
Ga0127501_10979282	3300010097	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREVH
Ga0127494_10705651	3300010107	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMG
Ga0127474_10365872	3300010108	Grasslands Soil	VERRGQAIRVMINLVNRQREEPSGYGGGRQPSVDG
Ga0127497_11093691	3300010109	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSR
Ga0127498_10225992	3300010124	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSM
Ga0127499_11072732	3300010141	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREV
Ga0126320_12513581	3300010146	Soil	MPVEQRGQAIRVMINLVNRKREEPTGCGGGRQLSMDGTSRVT
Ga0134071_104445931	3300010336	Grasslands Soil	MPAERRGRAIRVMVNLVNWQQEEPTGCGGGRQPSM
Ga0126372_104555741	3300010360	Tropical Forest Soil	MSVERRGQVIRVPITLVNWQQEESTDRGEGRQLFMDDTSRVS
Ga0126372_113387251	3300010360	Tropical Forest Soil	MERRGRVIRVIPTLVNRQREEPTGCDGERQLSMDGT
Ga0126379_133290631	3300010366	Tropical Forest Soil	VEPRGQAIRVMIDLVNWQQEEPTGYGGGRQLSLDGTS
Ga0126352_12624651	3300010859	Boreal Forest Soil	MPVERREQAIRVMVTLVNWQQEEPNGCGGGRQPLLDG
Ga0126351_11675582	3300010860	Boreal Forest Soil	MPVERREQAIRVMVTLVNWQQEEPNGCGGGRQPLLDGTSRVTGDG
Ga0126348_13264061	3300010862	Boreal Forest Soil	MPVERRGQAIRVMINLVNWQQEELTGCGGGRQLSLD
Ga0124850_11271781	3300010863	Tropical Forest Soil	MSVERRGQVIRALITLVNWQQEEPTDCGEGRQPLMDGTSRV
Ga0138593_1208591	3300011039	Peatlands Soil	MPVERRGQVICVMVNLANWQQEEPTGYGGGRRLSMDD
Ga0138598_1246561	3300011045	Peatlands Soil	MPVERRGQAIRVMITLVNWQQEEPNGCGGGAALNG
Ga0138526_10431041	3300011082	Peatlands Soil	MPVERRGQVICVMVNLANWQQEEPTGYGGGRRLSMDDT
Ga0150983_106472362	3300011120	Forest Soil	MPVERRGQAIRVMINLANWQQEEPTGRGGGRQLSMDGTSRVTG
Ga0150983_152031391	3300011120	Forest Soil	MPVERRGWAIRVTAGVVNWQQEEPSGRDGRRQLSRG
Ga0134032_12613481	3300012376	Grasslands Soil	MPVERRGQAIRVMINLANWQQEEPTGCGGGRQLSMDGTSRVMG
Ga0134052_12306051	3300012393	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSRE
Ga0134057_10187792	3300012396	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREVHA
Ga0134059_13048911	3300012402	Grasslands Soil	MAVERRGQVIRVMINLGNWQQDDPTGCGGGRQLSMGGTSRVSREVHARF
Ga0134041_11048281	3300012405	Grasslands Soil	MSVERRGQAIRVMVNLANWQQEELTGCGGARQLSMDG
Ga0134060_10503291	3300012410	Grasslands Soil	MPVERRGQAIRVMVTLVNWQQEEPNDCGGGRQLSR
Ga0150984_1100874172	3300012469	Avena Fatua Rhizosphere	MPVEQRGQAIRVMINLVNRKREEPTGCGGGRQLSMD
Ga0138256_107185931	3300012533	Active Sludge	GQAIRVMINLVNWQQEEPTGYGGGQQLLMDGTSRVS*
Ga0182027_113605321	3300014839	Fen	VERRGQAIRVMIALVNWQQEEPNGCGGGQQLLMNGTSR
Ga0163144_100806816	3300015360	Freshwater Microbial Mat	MPVERRGQAIRVMIDLVNWQQEEPTGDGGGRQLSMDGTSRVS*
Ga0163144_103149571	3300015360	Freshwater Microbial Mat	MPVERRGQAIRVMINVVNWRQEEPTGDGGGRQLSMDGTSRVS*
Ga0182040_117434311	3300016387	Soil	MSVERRGQVIRVLITLVNRQREEPTDRGEERQLFMDGTSR
Ga0181503_13026361	3300016698	Peatland	MPAEQRGQAIRVMIALVNWQQEEPNGCGGGQQLLL
Ga0181509_13517061	3300016701	Peatland	MPAERRGQAIRVMIVLVNWQQEEPNGCGGGQQLLMNGTS
Ga0181511_12898941	3300016702	Peatland	MPAEQRGQAIRVMIALVNWQQEEPNGCGGGQQLLLNGTSRVNREIY
Ga0187853_103051482	3300017940	Peatland	MPVERRGQAIRAMVNLANWQQEEPTGRGGGRQLSMDG
Ga0187884_103916621	3300018009	Peatland	MPVERRGQAIRVMIALVNWQQEEPNGCGGGQQLSLNGTSPANREI
Ga0187887_102646052	3300018043	Peatland	VERRRQAIRVMVNLANWQQEEPTGYGGGRQLSMDDTSRVNREVYA
Ga0184645_10808531	3300019233	Groundwater Sediment	MSVEQRGQAIRVIVNLANWQQEEPTGCGGGRQLSMD
Ga0184641_10405101	3300019254	Groundwater Sediment	MSVERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRV
Ga0180115_11721581	3300019257	Groundwater Sediment	MPAERRGQAIRVMIKLVNWRQEEPAGYGGGRQLSVDGTSRVSREAQ
Ga0184646_13805381	3300019259	Groundwater Sediment	MSVEQRGQAIRVIVNLANWQQEEPTGCGGGRQLSMDG
Ga0181512_15116551	3300019270	Peatland	VERRGRVIRVMVNLANWQQEEPTDCGGGRQLSMDGTSRVTGD
Ga0187800_12241631	3300019278	Peatland	VERRGQAIRVVIILVNWQQEEPIGCGGGRQLSMDGTSR
Ga0184642_16874031	3300019279	Groundwater Sediment	VERRGQAIRVMANLANWQQEEPTGCGGGRQLSMDG
Ga0163151_100129302	3300020057	Freshwater Microbial Mat	MPVERRGQAIRVMIDLVNWQQEEPTGDGGGRQLSMDGTSRVS
Ga0163151_104867901	3300020057	Freshwater Microbial Mat	MPVERKGQAIRVMINVVNWRQEEPTGDGGGRQLSMDGTSRVS
Ga0180118_10361161	3300020063	Groundwater Sediment	MSVERRGQAIRVMIDLVNRQREEPTGCGGGRQPSMD
Ga0163155_102852371	3300020180	Freshwater Microbial Mat	MPVERKGQAIRVMINVVNWGQEEPTGDGGGRQLSMDGTSRVS
Ga0163153_103197202	3300020186	Freshwater Microbial Mat	MPVERRGQAIRVMIDLVNWQQEEPTGDGGGRQLSMDGTSRV
Ga0163150_103227431	3300020195	Freshwater Microbial Mat	MPVERRGQAIRVMIDLVNWQQEEPTGDGGGRQLSM
Ga0210407_108861411	3300020579	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMDGTSRVTGDSHAR
Ga0179583_10326051	3300021286	Vadose Zone Soil	MSAERRGQAIRVMVNLVNWQQEEPTGCGGGRQPSMDG
Ga0210362_15796301	3300021329	Estuarine	MPVERRGQVIRVVIHLVNWQQEEPNGYGGGRQLSMDGTSR
Ga0210389_110741241	3300021404	Soil	MSAERRGQAIRVMVDLANWQQEEPTGCGGGRQLSM
Ga0222625_11552251	3300022195	Groundwater Sediment	MPAERRGQAIRVMIKLVNWRQEEPAGYGGGRQLSVDGTSRLSREAQAR
Ga0242644_10414461	3300022498	Soil	VERRGQAIRVMINKANWQQEEPTGCGGGRQLSMDGTSRV
Ga0242642_10763031	3300022504	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMD
Ga0242648_10729541	3300022506	Soil	VERRGQAIRVMINKANWQQEEPTGCGGGRQLSMDGTSR
Ga0242656_11100931	3300022525	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMDG
Ga0242670_10539041	3300022708	Soil	MSVERRGQAIRVMVDLANWQQEEPTGCGGGRQLSMDGTSRVTGDC
Ga0242677_10564822	3300022713	Soil	VERRGRAIRVMITLVNWQQEEPNGCGGGRQLSMDGTSRVTGDCH
Ga0242654_103154511	3300022726	Soil	VERRGQVIRVPITLVNWQQEEPTDRGEGRQLFMGD
Ga0208851_10067473	3300025461	Arctic Peat Soil	MPGERRGQAIRVRITLVNWQQEEPTGSGGGRQLSM
Ga0209747_11953111	3300025750	Arctic Peat Soil	MPVERRGRAIRVMINLVNWQQEEPAGCGGGRQPSMDGTSRVTGDS
Ga0209483_12376021	3300025862	Arctic Peat Soil	MPVERRRQVIRVMIDLANWQQEEPTGYGGGRQLSMDGTSRVT
Ga0209236_11614521	3300026298	Grasslands Soil	MPAERRGRAIRVMVNLVNWQQEEPTGCGGGRQPSMDGTSRV
Ga0209684_10512831	3300027527	Tropical Forest Soil	VERRGQAIHATIGVVNRQREEPTDCGGERQLSVDGTSRVS
Ga0208990_11968211	3300027663	Forest Soil	VERRGQVIRVMINLANWQQDEPTGCGGGRQPSMDGTSR
Ga0302218_100235272	3300028863	Palsa	VERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGDC
Ga0222748_10877992	3300029701	Soil	VERRGRAIRVMITLVNWQQEEPNGCGGGRQLSMDGTSRVTGDC
Ga0247275_11169831	3300029817	Soil	MSVERRGQAIRVMINLANWQQEEPTGCGGGRQLSMDGTSRV
Ga0311329_103086523	3300029907	Bog	MPVERRGQAIRVMVNLANWKQEEPTGCGGGRQLSMDGTSR
Ga0307482_12334561	3300030730	Hardwood Forest Soil	MPVERRRQVIRVLVMLVNWQQEEPNGYGGGRQLLWNGTSRVT
Ga0265759_1090422	3300030913	Soil	VERRGQAIRVMISLVNWQQEEPIGCGGGRQLSLDG
Ga0265759_1090791	3300030913	Soil	MAVEGREQVIRVMVHLVNWQQEEPTDCGGGRQLSLD
Ga0099845_15532601	3300030975	Boreal Forest Soil	MPVERRGQAICVMINLANWKQEEPNDYGGGRQLSMDGTSRVTGDCHA
Ga0308155_10230581	3300030987	Soil	MPVERRGRAIRVTVGVVNWQQEEPRGRDGKRQLSRDGTSRVTG
Ga0308204_102157521	3300031092	Soil	MPVERRGRAIRVTVDVVNWQQEEPRGRDGKRQLSRDGTSRVTG
Ga0308197_102308791	3300031093	Soil	MSVERRGQAIRVIVNLANWQQEEPTGSGGGRQLSMDGTSRVTG
Ga0308193_10732891	3300031096	Soil	MSVERRGQAIRVIVNLANWQQEEPTGSGGGRQLSMD
Ga0308194_102919161	3300031421	Soil	MSVERRGQAIRVIVNLANWQQEEPTGCGGGRQLSM
Ga0318521_108219541	3300031770	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVS
Ga0306921_123309952	3300031912	Soil	MSVERRGQVIRVMINLVNWQQEEPTDCGEGRQPLMDDTS
Ga0310916_105207461	3300031942	Soil	MSVERRGQVIRALITLVNWQQEEPTDCGEGRQLFMDDTS
Ga0307479_109945561	3300031962	Hardwood Forest Soil	MKRGNALERRGQAIRVMVNLANWQQEEPTGCGGGRQLSMDGTSRVTGD
Ga0315278_121423751	3300031997	Sediment	MPVERRGQVTRVAIDLANWQQEEPGGRGGRREPSLGGTSRVTG
Ga0318545_102042772	3300032042	Soil	MPTERRGQAIRVMPTLVNRQREEPTGCDGGRQLSMNGTSRVSREAQAR
Ga0315279_105293661	3300032070	Sediment	MPVERRGQVTCVAIHLANWQQEEPGGRGGRRQPSLGGTSRVTGDCQARF
Ga0306920_1037854941	3300032261	Soil	MERRGQAIRVMIDLVNWQQEEPIGCGGERQLSVNGTSRVSREAQ
Ga0315287_100795871	3300032397	Sediment	MPGERRGQAIRVRITLVHWQQEEPTGSGGGRQFSMDGT
Ga0314780_165963_3_125	3300034659	Soil	MSVERRGQAIRVMVNLANWQQEEPTGCGGGRQPSMDGTSRV
Ga0314782_149281_1_126	3300034661	Soil	MSVERRGQAIRVMVNLANWQQEEPTGCGGGRQPSMDGTSRVT
Ga0314792_199283_450_560	3300034667	Soil	MSVERRGQAIRVMVNLANWQQEEPTGCGGGRQPSMDG

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.38
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.38
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083839

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


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