Metagenome Family F083511

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083511
Family Type	Metagenome
Number of Sequences	112
Average Sequence Length	79 residues
Representative Sequence	LYSNGKMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Number of Associated Samples	67
Number of Associated Scaffolds	112

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	1.79 %
% of genes near scaffold ends (potentially truncated)	100.00 %
% of genes from short scaffolds (< 2000 bps)	97.32 %
Associated GOLD sequencing projects	60
AlphaFold2 3D model prediction	No

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (56.250 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (64.286 % of family members)
Environment Ontology (ENVO)	Unclassified (92.857 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (64.286 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Fibrous	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 0.00% β-sheet: 49.37% Coil/Unstructured: 50.63%
Feature Viewer

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Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 112 Family Scaffolds
PF01872	RibD_C	7.14
PF13977	TetR_C_6	6.25
PF04542	Sigma70_r2	3.57
PF08818	DUF1801	3.57
PF00005	ABC_tran	3.57
PF00583	Acetyltransf_1	2.68
PF03640	Lipoprotein_15	2.68
PF00528	BPD_transp_1	2.68
PF01053	Cys_Met_Meta_PP	2.68
PF00106	adh_short	1.79
PF13565	HTH_32	1.79
PF00589	Phage_integrase	1.79
PF01545	Cation_efflux	1.79
PF02878	PGM_PMM_I	0.89
PF16472	DUF5050	0.89
PF04879	Molybdop_Fe4S4	0.89
PF13510	Fer2_4	0.89
PF09335	SNARE_assoc	0.89
PF02673	BacA	0.89
PF13358	DDE_3	0.89
PF13450	NAD_binding_8	0.89
PF13340	DUF4096	0.89
PF12867	DinB_2	0.89
PF03711	OKR_DC_1_C	0.89

COG ID	Name	Functional Category	% Frequency in 112 Family Scaffolds
COG0262	Dihydrofolate reductase	Coenzyme transport and metabolism [H]	7.14
COG1985	Pyrimidine reductase, riboflavin biosynthesis	Coenzyme transport and metabolism [H]	7.14
COG0568	DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32)	Transcription [K]	3.57
COG1191	DNA-directed RNA polymerase specialized sigma subunit	Transcription [K]	3.57
COG1595	DNA-directed RNA polymerase specialized sigma subunit, sigma24 family	Transcription [K]	3.57
COG1982	Arginine/lysine/ornithine decarboxylase	Amino acid transport and metabolism [E]	3.57
COG4430	Uncharacterized conserved protein YdeI, YjbR/CyaY-like superfamily, DUF1801 family	Function unknown [S]	3.57
COG4941	Predicted RNA polymerase sigma factor, contains C-terminal TPR domain	Transcription [K]	3.57
COG5646	Iron-binding protein Fra/YdhG, frataxin family (Fe-S cluster biosynthesis)	Posttranslational modification, protein turnover, chaperones [O]	3.57
COG5649	Uncharacterized conserved protein, DUF1801 domain	Function unknown [S]	3.57
COG0075	Archaeal aspartate aminotransferase or a related aminotransferase, includes purine catabolism protein PucG	Amino acid transport and metabolism [E]	2.68
COG0156	7-keto-8-aminopelargonate synthetase or related enzyme	Coenzyme transport and metabolism [H]	2.68
COG0399	dTDP-4-amino-4,6-dideoxygalactose transaminase	Cell wall/membrane/envelope biogenesis [M]	2.68
COG0436	Aspartate/methionine/tyrosine aminotransferase	Amino acid transport and metabolism [E]	2.68
COG0520	Selenocysteine lyase/Cysteine desulfurase	Amino acid transport and metabolism [E]	2.68
COG0626	Cystathionine beta-lyase/cystathionine gamma-synthase	Amino acid transport and metabolism [E]	2.68
COG1921	Seryl-tRNA(Sec) selenium transferase	Translation, ribosomal structure and biogenesis [J]	2.68
COG2008	Threonine aldolase	Amino acid transport and metabolism [E]	2.68
COG2873	O-acetylhomoserine/O-acetylserine sulfhydrylase, pyridoxal phosphate-dependent	Amino acid transport and metabolism [E]	2.68
COG4100	Cystathionine beta-lyase family protein involved in aluminum resistance	Inorganic ion transport and metabolism [P]	2.68
COG4315	Predicted lipoprotein with conserved Yx(FWY)xxD motif (function unknown)	Function unknown [S]	2.68
COG0053	Divalent metal cation (Fe/Co/Zn/Cd) efflux pump	Inorganic ion transport and metabolism [P]	1.79
COG1230	Co/Zn/Cd efflux system component	Inorganic ion transport and metabolism [P]	1.79
COG3965	Predicted Co/Zn/Cd cation transporter, cation efflux family	Inorganic ion transport and metabolism [P]	1.79
COG0033	Phosphoglucomutase/phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG0398	Uncharacterized membrane protein YdjX, related to fungal oxalate transporter, TVP38/TMEM64 family	Function unknown [S]	0.89
COG0586	Membrane integrity protein DedA, putative transporter, DedA/Tvp38 family	Cell wall/membrane/envelope biogenesis [M]	0.89
COG1109	Phosphomannomutase	Carbohydrate transport and metabolism [G]	0.89
COG1238	Uncharacterized membrane protein YqaA, VTT domain	Function unknown [S]	0.89
COG1968	Undecaprenyl pyrophosphate phosphatase	Lipid transport and metabolism [I]	0.89

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	56.25 %
Unclassified	root	N/A	43.75 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	23.21 %
Proteobacteria	phylum	All Organisms → cellular organisms → Bacteria → Proteobacteria	6.25 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	21.43 %
Betaproteobacteria	class	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria	5.36 %
Chloroflexi	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	14.29 %
Burkholderiales	order	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales	5.36 %
unclassified Chloroflexi	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Oxalobacteraceae	family	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae	5.36 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1.79 %
Catenulisporales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales	0.89 %
Geodermatophilales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.89 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	0.89 %
Frankiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Massilia group	no rank	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group	5.36 %
Actinospicaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae	0.89 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	0.89 %
Microbacteriaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.89 %
Frankiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Duganella	genus	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella	5.36 %
Actinospica	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	0.89 %
Microbacterium	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Duganella zoogloeoides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	5.36 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.89 %
unclassified Microbacterium	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium	0.89 %
Streptomyces aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aureus	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	43.75 %
Duganella zoogloeoides	species	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	5.36 %
Microbacterium sp. 13-71-7	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. 13-71-7	0.89 %
Actinospica robiniae	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	0.89 %
Streptomyces aureus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aureus	0.89 %
Frankia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	0.89 %
Geodermatophilaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	0.89 %
Thermomonosporaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	0.89 %
Chloroflexi bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	0.89 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300005467\|Ga0070706_101284712	All Organisms → cellular organisms → Bacteria	671	Open in IMG/M
3300005468\|Ga0070707_101118522	All Organisms → cellular organisms → Bacteria	754	Open in IMG/M
3300005764\|Ga0066903_104310147	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	760	Open in IMG/M
3300005764\|Ga0066903_106286098	Not Available	620	Open in IMG/M
3300010366\|Ga0126379_11689346	Not Available	738	Open in IMG/M
3300012971\|Ga0126369_11439305	Not Available	779	Open in IMG/M
3300016270\|Ga0182036_10960748	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	703	Open in IMG/M
3300016294\|Ga0182041_10997237	All Organisms → cellular organisms → Bacteria	757	Open in IMG/M
3300016294\|Ga0182041_11134330	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Chloroflexi → unclassified Chloroflexi → Chloroflexi bacterium	711	Open in IMG/M
3300016319\|Ga0182033_10437636	All Organisms → cellular organisms → Bacteria	1113	Open in IMG/M
3300016319\|Ga0182033_11007369	All Organisms → cellular organisms → Bacteria	741	Open in IMG/M
3300016341\|Ga0182035_10886584	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Microbacteriaceae → Microbacterium → unclassified Microbacterium → Microbacterium sp. 13-71-7	786	Open in IMG/M
3300016341\|Ga0182035_10928183	Not Available	769	Open in IMG/M
3300016341\|Ga0182035_12193528	Not Available	500	Open in IMG/M
3300016387\|Ga0182040_10138841	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1715	Open in IMG/M
3300016387\|Ga0182040_10967640	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	708	Open in IMG/M
3300016404\|Ga0182037_12163611	Not Available	501	Open in IMG/M
3300016422\|Ga0182039_10288700	All Organisms → cellular organisms → Bacteria	1354	Open in IMG/M
3300016422\|Ga0182039_11511816	Not Available	611	Open in IMG/M
3300016422\|Ga0182039_12147231	Not Available	515	Open in IMG/M
3300016445\|Ga0182038_11052769	Not Available	722	Open in IMG/M
3300017959\|Ga0187779_10776546	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	652	Open in IMG/M
3300021560\|Ga0126371_10620118	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	1230	Open in IMG/M
3300031544\|Ga0318534_10111321	Not Available	1571	Open in IMG/M
3300031544\|Ga0318534_10126864	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1467	Open in IMG/M
3300031546\|Ga0318538_10337094	Not Available	814	Open in IMG/M
3300031546\|Ga0318538_10430887	Not Available	714	Open in IMG/M
3300031546\|Ga0318538_10524844	Not Available	642	Open in IMG/M
3300031561\|Ga0318528_10151660	All Organisms → cellular organisms → Bacteria → Proteobacteria	1234	Open in IMG/M
3300031561\|Ga0318528_10206660	Not Available	1051	Open in IMG/M
3300031564\|Ga0318573_10355538	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	786	Open in IMG/M
3300031564\|Ga0318573_10398226	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Catenulisporales → Actinospicaceae → Actinospica → Actinospica robiniae	740	Open in IMG/M
3300031572\|Ga0318515_10204303	All Organisms → cellular organisms → Bacteria	1059	Open in IMG/M
3300031572\|Ga0318515_10368713	All Organisms → cellular organisms → Bacteria	769	Open in IMG/M
3300031572\|Ga0318515_10689434	Not Available	541	Open in IMG/M
3300031640\|Ga0318555_10719587	All Organisms → cellular organisms → Bacteria	539	Open in IMG/M
3300031668\|Ga0318542_10171949	Not Available	1084	Open in IMG/M
3300031679\|Ga0318561_10358043	Not Available	800	Open in IMG/M
3300031680\|Ga0318574_10139711	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1370	Open in IMG/M
3300031682\|Ga0318560_10185536	Not Available	1109	Open in IMG/M
3300031713\|Ga0318496_10084824	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Frankiales → Frankiaceae → Frankia	1685	Open in IMG/M
3300031713\|Ga0318496_10117279	Not Available	1439	Open in IMG/M
3300031713\|Ga0318496_10118953	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Thermomonosporaceae	1429	Open in IMG/M
3300031713\|Ga0318496_10558706	Not Available	633	Open in IMG/M
3300031719\|Ga0306917_10615231	Not Available	854	Open in IMG/M
3300031723\|Ga0318493_10453174	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	706	Open in IMG/M
3300031723\|Ga0318493_10457415	Not Available	702	Open in IMG/M
3300031724\|Ga0318500_10460226	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	637	Open in IMG/M
3300031736\|Ga0318501_10392421	Not Available	749	Open in IMG/M
3300031744\|Ga0306918_10961291	All Organisms → cellular organisms → Bacteria → Terrabacteria group	664	Open in IMG/M
3300031764\|Ga0318535_10395226	All Organisms → cellular organisms → Bacteria	617	Open in IMG/M
3300031770\|Ga0318521_10014817	All Organisms → cellular organisms → Bacteria	3488	Open in IMG/M
3300031770\|Ga0318521_10110986	All Organisms → cellular organisms → Bacteria	1522	Open in IMG/M
3300031771\|Ga0318546_10710543	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	707	Open in IMG/M
3300031771\|Ga0318546_11346119	Not Available	501	Open in IMG/M
3300031782\|Ga0318552_10441614	Not Available	664	Open in IMG/M
3300031782\|Ga0318552_10736366	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	503	Open in IMG/M
3300031793\|Ga0318548_10629324	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	521	Open in IMG/M
3300031795\|Ga0318557_10269130	Not Available	781	Open in IMG/M
3300031798\|Ga0318523_10482178	Not Available	614	Open in IMG/M
3300031805\|Ga0318497_10285554	All Organisms → cellular organisms → Bacteria	918	Open in IMG/M
3300031805\|Ga0318497_10509712	Not Available	674	Open in IMG/M
3300031819\|Ga0318568_10521427	Not Available	741	Open in IMG/M
3300031821\|Ga0318567_10252812	All Organisms → cellular organisms → Bacteria	990	Open in IMG/M
3300031821\|Ga0318567_10803752	Not Available	533	Open in IMG/M
3300031831\|Ga0318564_10421518	Not Available	583	Open in IMG/M
3300031831\|Ga0318564_10448080	All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae → Massilia group → Duganella → Duganella zoogloeoides	563	Open in IMG/M
3300031846\|Ga0318512_10026284	Not Available	2455	Open in IMG/M
3300031846\|Ga0318512_10604749	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces aureus	559	Open in IMG/M
3300031860\|Ga0318495_10152445	All Organisms → cellular organisms → Bacteria	1042	Open in IMG/M
3300031860\|Ga0318495_10229719	Not Available	833	Open in IMG/M
3300031890\|Ga0306925_10512620	Not Available	1276	Open in IMG/M
3300031890\|Ga0306925_10600837	Not Available	1162	Open in IMG/M
3300031890\|Ga0306925_11733294	Not Available	601	Open in IMG/M
3300031893\|Ga0318536_10155211	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1163	Open in IMG/M
3300031894\|Ga0318522_10068758	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1279	Open in IMG/M
3300031897\|Ga0318520_10366843	All Organisms → cellular organisms → Bacteria	876	Open in IMG/M
3300031897\|Ga0318520_10744830	Not Available	613	Open in IMG/M
3300031910\|Ga0306923_12249698	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	545	Open in IMG/M
3300031912\|Ga0306921_12438133	Not Available	545	Open in IMG/M
3300031941\|Ga0310912_10442062	All Organisms → cellular organisms → Bacteria	1014	Open in IMG/M
3300031941\|Ga0310912_10930941	All Organisms → cellular organisms → Bacteria	668	Open in IMG/M
3300031942\|Ga0310916_10491944	All Organisms → cellular organisms → Bacteria	1045	Open in IMG/M
3300031942\|Ga0310916_11399158	Not Available	573	Open in IMG/M
3300031947\|Ga0310909_10528884	Not Available	988	Open in IMG/M
3300031947\|Ga0310909_11087855	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Geodermatophilales → Geodermatophilaceae	650	Open in IMG/M
3300031954\|Ga0306926_10219090	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2362	Open in IMG/M
3300031954\|Ga0306926_11418236	All Organisms → cellular organisms → Bacteria	805	Open in IMG/M
3300031954\|Ga0306926_11492852	All Organisms → cellular organisms → Bacteria	780	Open in IMG/M
3300032001\|Ga0306922_10298782	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1729	Open in IMG/M
3300032001\|Ga0306922_10434975	Not Available	1403	Open in IMG/M
3300032001\|Ga0306922_10436533	Not Available	1400	Open in IMG/M
3300032001\|Ga0306922_10875662	Not Available	934	Open in IMG/M
3300032010\|Ga0318569_10124775	All Organisms → cellular organisms → Bacteria	1174	Open in IMG/M
3300032010\|Ga0318569_10534579	Not Available	546	Open in IMG/M
3300032025\|Ga0318507_10467882	All Organisms → cellular organisms → Bacteria	549	Open in IMG/M
3300032043\|Ga0318556_10157014	Not Available	1176	Open in IMG/M
3300032044\|Ga0318558_10504142	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	604	Open in IMG/M
3300032044\|Ga0318558_10672697	Not Available	517	Open in IMG/M
3300032052\|Ga0318506_10522405	All Organisms → cellular organisms → Bacteria	526	Open in IMG/M
3300032055\|Ga0318575_10051056	All Organisms → cellular organisms → Bacteria	1896	Open in IMG/M
3300032055\|Ga0318575_10453759	All Organisms → cellular organisms → Bacteria	651	Open in IMG/M
3300032060\|Ga0318505_10331941	All Organisms → cellular organisms → Bacteria	718	Open in IMG/M
3300032067\|Ga0318524_10505391	Not Available	634	Open in IMG/M
3300032067\|Ga0318524_10607308	Not Available	576	Open in IMG/M
3300032076\|Ga0306924_10305218	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1826	Open in IMG/M
3300032076\|Ga0306924_10880813	Not Available	992	Open in IMG/M
3300032076\|Ga0306924_11406534	All Organisms → cellular organisms → Bacteria	744	Open in IMG/M
3300032091\|Ga0318577_10529801	All Organisms → cellular organisms → Bacteria	561	Open in IMG/M
3300032094\|Ga0318540_10250873	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	854	Open in IMG/M
3300033290\|Ga0318519_10097967	All Organisms → cellular organisms → Bacteria	1573	Open in IMG/M
3300033290\|Ga0318519_10480607	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	747	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	100.00%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	95.54%
Loam	Environmental → Terrestrial → Soil → Loam	3.57%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	92.86%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	2.68%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	1.79%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.79%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	64.29%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	28.57%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	2.68%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	1.79%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.79%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300005467	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-1 metaG	Environmental	Open in IMG/M
3300005468	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300010366	Tropical forest soil microbial communities from Panama - MetaG Plot_24	Environmental	Open in IMG/M
3300012971	Tropical forest soil microbial communities from Panama - MetaG Plot_1	Environmental	Open in IMG/M
3300016270	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300016404	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082	Environmental	Open in IMG/M
3300016422	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111	Environmental	Open in IMG/M
3300016445	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108	Environmental	Open in IMG/M
3300017959	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_10_MG	Environmental	Open in IMG/M
3300021560	Tropical forest soil microbial communities from Panama - MetaG Plot_4	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031546	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23	Environmental	Open in IMG/M
3300031561	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031679	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031682	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f22	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031723	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f23	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031736	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031764	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f27	Environmental	Open in IMG/M
3300031770	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f17	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031793	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f21	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031798	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f19	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031831	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f20	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031890	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031894	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f18	Environmental	Open in IMG/M
3300031897	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f16	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300031912	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)	Environmental	Open in IMG/M
3300031941	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031947	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032010	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f22	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032043	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f24	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032052	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f19	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032067	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f22	Environmental	Open in IMG/M
3300032076	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)	Environmental	Open in IMG/M
3300032091	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f25	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
Ga0070706_1012847121	3300005467	Corn, Switchgrass And Miscanthus Rhizosphere	MNNNGQIVVWPAVTDGFLYSNGTITELGTFFPNAINDNGVMVAGFSIDSGGTLQNLNSFIPANSGYQIYYATAISDNGQIVANAYY
Ga0070707_1011185221	3300005468	Corn, Switchgrass And Miscanthus Rhizosphere	MNNNGQIVVWPAVTDGFLYSNGTITELGTFFPNAINDNGVMVAGFSIDSGGTLQNLNSFIPANSGYQIYYATAISDNGQIV
Ga0066903_1043101471	3300005764	Tropical Forest Soil	TDGFLYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSATIQDATGINDNGQIVASATGSTSGAVLLNPS*
Ga0066903_1062860981	3300005764	Tropical Forest Soil	LYSNGTMTDLGSFTPAAINDHAVMVGGQFVDSGGTVQNLNNLIPAGSPYQIESATGINDNGQIVANATDTATGQTHALLLNPS*
Ga0126379_116893461	3300010366	Tropical Forest Soil	AINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS*
Ga0126369_114393051	3300012971	Tropical Forest Soil	LGSFIPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDAKAINDNGQIVASATGSTSGAVLLNPS*
Ga0182036_109607481	3300016270	Soil	GVATDGFLYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0182041_109972371	3300016294	Soil	TEGFLYTNGTITNLGSFLAAAINDNGVIVGGDQIDTGGTPQNLNTLVPAGSPTIQYATAINDNGQIVASPAVLLTPG
Ga0182041_111343302	3300016294	Soil	FIPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQNATGINDNGQIVASATGSTSGAVLLNPS
Ga0182033_104376362	3300016319	Soil	TQAVAINSNGQIAGTVFTVGAAEGFLYSNGTITNLGSFLPAAINDRGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVANGSVGSGAVLLTPS
Ga0182033_110073691	3300016319	Soil	AGTVFTGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQDATAINNNGQIVASPAVLLNPS
Ga0182035_108865841	3300016341	Soil	PAAINDNGVMVGGPYIDSGGTIQNLNTLIPAGSPTIQYATAINDNGQIVASATGSTSGAVILNPS
Ga0182035_109281831	3300016341	Soil	MTNLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPQIIYANGINDNGQIVASAIGSTSGAVRLNPS
Ga0182035_121935282	3300016341	Soil	PAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0182040_101388411	3300016387	Soil	NGTITNLGSFLAAAINDNGVIVGGDQIDTGGTPQNLNTLVPAGSPTIQYATAINDNGQIVASPAVLLTPG
Ga0182040_109676401	3300016387	Soil	LGSFLPAAINDNGVTVGGPFIDTGGTLQNLNNLIPAGSGQIQYATAINDNGQIVANGSVGSGAVLLTPS
Ga0182037_121636111	3300016404	Soil	SNGTMTDLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLVPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0182039_102887001	3300016422	Soil	INASGQIVGYGTALGSGVATDGFLFSNGKMTDLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0182039_115118161	3300016422	Soil	ITDLGSFYPNSINDNGVMVGGPSIDSGGTLQNLNNLVPTNSGSQIGDATAIKDNGQIVAITSDNRFVLLNPS
Ga0182039_121472311	3300016422	Soil	GTITNLGSFLAAAINDNGVMVGGPSIDTSGTVQNLNTLIPAGSGQIQYATAISNTGQIVANGTGGSGAVLLNPS
Ga0182038_110527691	3300016445	Soil	TDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0187779_107765461	3300017959	Tropical Peatland	QIIGHQTAITGVNQGFLDSNGTMTNLGSFLPAAINDNGVMVGGPYIDSGGTVQNLNTLILAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPR
Ga0126371_106201181	3300021560	Tropical Forest Soil	IAGTVFSGGTTAGFLYSNGTLTGLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINDNGQIVASPAVLLNPS
Ga0318534_101113211	3300031544	Soil	GFLYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0318534_101268641	3300031544	Soil	IAGTVFSGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318538_103370941	3300031546	Soil	LGSFVPAAINDNGVMVGGQDIDSGGTVTNLNTLIPAGSPTIQDATAINNNGQIAATATGSTSGAVLLNPS
Ga0318538_104308871	3300031546	Soil	VFSSGTTEGFLYSNGTITSLGSFLAAAINDNGVMVGGPSIDTSGTVQNLNTLIPAGSGQIQYATAISNTGQIVANGTGGSGAVLLNPS
Ga0318538_105248441	3300031546	Soil	TMTDLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINNNGQIVASATGSTSGAVLLNPS
Ga0318528_101516602	3300031561	Soil	LYSNGSMTNLGSFIPAAINDNGVMVGGQYIDSGGTVQNLNTLIPAGSPTIQDANAINNNGQIAASATGSTSDAVLLNPS
Ga0318528_102066602	3300031561	Soil	TALGSGVATDGFLYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0318573_103555383	3300031564	Soil	PAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQYATAINDNGQIVASATGSTSGVLLNPS
Ga0318573_103982261	3300031564	Soil	MTDLGSNFSPAAVNDSGVIVGGQFVYNGTLQNLNALIPAGSPYQIQNATGINDNGQIVANATDTATGQTHALLLNPS
Ga0318515_102043032	3300031572	Soil	QIAGTVFSGGTTEGFMYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318515_103687132	3300031572	Soil	GQIVGYGTALGSGVATDGFLYSNGTITDLGSFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318515_106894341	3300031572	Soil	TVFSSGTTEGFLYSNGTITSLGSFLAAAINDNGVMVGGPSIDTSGTVQNLNTLIPAGSGQIQYATAISNTGQIVANGTGGSGAVLLNPS
Ga0318555_107195872	3300031640	Soil	LYSNGKMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318542_101719491	3300031668	Soil	LYSNGTMTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318561_103580432	3300031679	Soil	SNGTMTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318574_101397111	3300031680	Soil	DGFLFSNGKMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATGINDHGQIVASATGSTSGAVLLNPA
Ga0318560_101855363	3300031682	Soil	LYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0318496_100848243	3300031713	Soil	GGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318496_101172791	3300031713	Soil	LGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNQS
Ga0318496_101189531	3300031713	Soil	GTLTNLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0318496_105587061	3300031713	Soil	NNGQIAGTVFSGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0306917_106152312	3300031719	Soil	VPAAINDNGVMVGGQYIDSGGTVTNLNTLIPAGSPTIQDATAINNNGQIAATATGSTSGAVLLNPS
Ga0318493_104531742	3300031723	Soil	SNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINNTGQIVASPAVLLNPS
Ga0318493_104574152	3300031723	Soil	YSNGTMTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318500_104602261	3300031724	Soil	TTEGFMYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNTLIPAGSGQIQDATAINDNGQIVANGTVGSGSVLLNPS
Ga0318501_103924212	3300031736	Soil	TALGSGVATDGFLFSNGKMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0306918_109612911	3300031744	Soil	IPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNQS
Ga0318535_103952262	3300031764	Soil	NNNGQIAGTVFTGGTTEGFLYSNGTITNLGSFLPAAINDSGVMVGGDQIDTGGTLQNLNNLLPAGSPTIQDATAINDNGQVVASATGSGAVLLTPS
Ga0318521_100148174	3300031770	Soil	TALGSGVATDGFLYSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNQS
Ga0318521_101109861	3300031770	Soil	SYTQAVAINNNGQIAGTVNAGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318546_107105432	3300031771	Soil	INDNGVMVGGPSIDTGGTVQNLNNLIPAGSGYQIQNATAISNNGQIVASATAPSSGAVLLNPS
Ga0318546_113461192	3300031771	Soil	GFLYSNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATRGGAVLLNPS
Ga0318552_104416141	3300031782	Soil	FLYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNTLIPAGSGQIQDATAINDNGQIVANGTVGSGSVLLNPS
Ga0318552_107363661	3300031782	Soil	GGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTVQNLNTLIPAGSGQIQYATAINDNGQIVANGLLLNPS
Ga0318548_106293241	3300031793	Soil	LSPPGSYSYTQAVAINNNGQIAGTVNAGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318557_102691302	3300031795	Soil	TMTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318523_104821781	3300031798	Soil	MTDLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINNNGQIVASATGSTSGAVLLNPS
Ga0318497_102855542	3300031805	Soil	NNNGQIAGTVFSGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318497_105097121	3300031805	Soil	MTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318568_105214272	3300031819	Soil	TGVTQGFLYSNGTMTNLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINDNGQIAASATGSTSGAVLLNPS
Ga0318567_102528122	3300031821	Soil	LGSGVATDGFLYSNGTMTDLGSFVPAAINDNGVMVGGPYIDSGGTVQNLNNLIPAGSPTIQDATGINDNGQIVASATGSTSGVLLNPS
Ga0318567_108037521	3300031821	Soil	LYSNGTITSLGSFLAAAINDNGVMVGGPSIDTSGTVQNLNTLIPAGSGQIQYATAISNTGQIVANGTGGSGAVLLNPS
Ga0318564_104215182	3300031831	Soil	GGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318564_104480801	3300031831	Soil	EGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318512_100262844	3300031846	Soil	NLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPQIIYANGINDNGQIVASAIGSTSGAVRLNPS
Ga0318512_106047491	3300031846	Soil	LGSFVPAAINDNGVMVGGQYIDSGGTVTNLNTLIPAGSPTIQDATAINNNGQIAATATGSTSGAVLLNPS
Ga0318495_101524451	3300031860	Soil	NGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATGINDHGQIVASATGSTSGAVLLNPA
Ga0318495_102297191	3300031860	Soil	AVAINNNGQIAGTVFTGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGALQNLNSLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0306925_105126203	3300031890	Soil	SFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0306925_106008371	3300031890	Soil	PGSYSFTQAVSINNNGQIAGTVFSGGTTEGFMYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINDNGQVVASATGSGAVLLTPS
Ga0306925_117332941	3300031890	Soil	TTEGFMYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318536_101552111	3300031893	Soil	TTEGFLYNNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318522_100687583	3300031894	Soil	FLPAAINDSGVMVGGPSIDTGGTVQNLNTLLPAGSPTIQDATAINDNGQVVASATGSGAVLLTPS
Ga0318520_103668431	3300031897	Soil	ATDGFLYSNGTMTNLGSFNPAAINDTGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDANAINDNGQITASATGSTSGAVLLNPS
Ga0318520_107448302	3300031897	Soil	FNPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINNNGQIVASATGSTSGAVLLNPS
Ga0306923_122496982	3300031910	Soil	AINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQYATAINDNGQIVASATGSTSGVLLNPS
Ga0306921_124381331	3300031912	Soil	YSNGTMTDLGSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPQITYANGINDNGQIVASAIGSTSGAVLLNPS
Ga0310912_104420621	3300031941	Soil	QIAGTVFSGGTTEGFMYSNGTITNLGSFLPAAINDSGVMVGGPFIDTGGTLQNLNNLIPAGSGQIQYATAINDNGQIVANGSVGSGAVLLTPS
Ga0310912_109309411	3300031941	Soil	NTGQIAGTVNAGGTTEGFLYTNGTITNLGSFLAAAINDNGVIVGGDQIDTGGTPQNLNTLVPAGSPTIQYATAINDNGQIVASPAVLLTPG
Ga0310916_104919441	3300031942	Soil	QAISINSNGQIAGTVFTGGTTEGFLYSNGTITNLGSFLPAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQDATAINNNGQIVASPAVLLNPS
Ga0310916_113991581	3300031942	Soil	RVHVQQRHHHQPGSFLPAAINDSGVMVGGDQIDTGGTLQNLNNLLPAGSPTIQDATAINDNGQVVASATGSGAVLLTPS
Ga0310909_105288843	3300031947	Soil	SFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0310909_110878551	3300031947	Soil	YTNGTITNLGSFLAAAINDNGVIVGGDQIDTGGTPQNLNTLVPAGSPTIQYATAINDNGQIVASPAVLLTPG
Ga0306926_102190902	3300031954	Soil	GTMTNLGSFNPAAINDNGVMVGGQYIDSGGTIQNLNTLIPAGSPTIQDANAINNNGQIAASATGSTSGAVLLNPS
Ga0306926_114182361	3300031954	Soil	DEGFLYSNGTITNLGSFLPAAINDNGVMVGGPFIDTGGTLQNLNNLIPAGSGQIQYATAINDNGQIVANGSVGSGAALLTPS
Ga0306926_114928522	3300031954	Soil	QGFLYSNGTMTNLGSFTPAAINDNGVMVGGPYIDSGGTIQNLNTLIPAGSPTIQYATAINDNGQIVASATGSTSGAVILNPS
Ga0306922_102987821	3300032001	Soil	GLLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGALQNLNSLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0306922_104349751	3300032001	Soil	GSFIPAAINDNGVMVGGPYIDSGGTVQNLNTLTPAGSPQITYANGINDNGQIVASAIGSTSGAVRLNPS
Ga0306922_104365333	3300032001	Soil	SFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINNNGQIVASATGSTSGAVLLNPS
Ga0306922_108756621	3300032001	Soil	DLGSFAPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0318569_101247753	3300032010	Soil	SFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318569_105345791	3300032010	Soil	INNNGQIAGTVFTGGTTEGFLYSNGTITNLGSFLPAAINDSGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318507_104678822	3300032025	Soil	DGFLYSNGTITDLGSFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318556_101570142	3300032043	Soil	PAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINNNGQIVASATGSTSGAVLLNPS
Ga0318558_105041421	3300032044	Soil	GTLTNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318558_106726972	3300032044	Soil	LYSNGTMTDLGSFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318506_105224052	3300032052	Soil	INNNGQIAGTVFTGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQDATAINNNGQIVASPAVLLNPS
Ga0318575_100510562	3300032055	Soil	GVSQGFLYSNGSMTNLGSFIPAAINDNGVMVGGQYIDSGGTVQNLNTLIPAGSPTIQDANAINNNGQIAASATGSTSDAVLLNPS
Ga0318575_104537591	3300032055	Soil	NGQIAGTVFTGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQDATAINNNGQIVASPAVLLNPS
Ga0318505_103319411	3300032060	Soil	NAGGTTEGFLYTNGTITNLGSFLAAAINDNGVIVGGDQIDTGGTPQNLNTLVPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0318524_105053911	3300032067	Soil	AAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIAASATGSTSGAVLLNPS
Ga0318524_106073081	3300032067	Soil	FLYSNGTITNLGSFLPAAINDNGVMVGGPFIDTGGTLQNLNNLIPAGSGQIQYATAINDNGQIVANGSVGSGAALLTPS
Ga0306924_103052181	3300032076	Soil	TVFSGGTTEGFLYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQYATAINDNGQIVASPAVLLNPS
Ga0306924_108808131	3300032076	Soil	ITNLGSFLPAAINDSGVMVGGPFIDTGGTLQNLNNLIPAGSGQIQYATAINDNGQIVANGSVGSGAVLLTPS
Ga0306924_114065341	3300032076	Soil	LTDLGSFTPAAINDNGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQNATAINDNGQIAASATGSTSGAVLLNPS
Ga0318577_105298012	3300032091	Soil	TITDLGSFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318540_102508732	3300032094	Soil	VFSGGTTEGFLYNNGTITNLGSFLAAAINDNGVMVGGPSIDTGGTVQNLNNLLPAGSPTIQDATAINNNGQIVASATPGGAVLLNPS
Ga0318519_100979673	3300033290	Soil	SGVATDGFLYSNGTITDLGSFTPAAINDHGVMVGGPYIDSGGTVQNLNTLIPAGSPTIQDATAINDNGQIVASATGSTSGAVLLNPS
Ga0318519_104806072	3300033290	Soil	LYSNGTITNLGSFLAAAINDNGVMVGGDQIDTGGTLQNLNTLLPAGSPTIQDATAINNNGQIVASPAVLLNPS

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083511

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences