Metagenome / Metatranscriptome Family F083341

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences

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Overview

Basic Information
Family ID	F083341
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	82 residues
Representative Sequence	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRAD
Number of Associated Samples	96
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Bacteria
% of genes with valid RBS motifs	94.69 %
% of genes near scaffold ends (potentially truncated)	99.12 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	93
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.68

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.

Hidden Markov Model


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Most Common Taxonomy
Group	Bacteria (51.327 % of family members)
NCBI Taxonomy ID	2
Taxonomy	All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (47.788 % of family members)
Environment Ontology (ENVO)	Unclassified (53.982 % of family members)
Earth Microbiome Project Ontology (EMPO)	Unclassified (46.903 % of family members)

Multiple Sequence Alignments

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 30.97% β-sheet: 10.62% Coil/Unstructured: 58.41%
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Predicted 3D Structure

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.68
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.68
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

Gene Neighborhood

Neighboring Pfam domains

Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF00144	Beta-lactamase	5.31
PF04024	PspC	4.42
PF00753	Lactamase_B	3.54
PF13683	rve_3	1.77
PF13411	MerR_1	1.77
PF00106	adh_short	0.88
PF02696	SelO	0.88
PF07992	Pyr_redox_2	0.88
PF00202	Aminotran_3	0.88
PF01548	DEDD_Tnp_IS110	0.88
PF00860	Xan_ur_permease	0.88
PF00703	Glyco_hydro_2	0.88
PF02371	Transposase_20	0.88
PF00069	Pkinase	0.88
PF14329	DUF4386	0.88
PF01042	Ribonuc_L-PSP	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1680	CubicO group peptidase, beta-lactamase class C family	Defense mechanisms [V]	5.31
COG1686	D-alanyl-D-alanine carboxypeptidase	Cell wall/membrane/envelope biogenesis [M]	5.31
COG2367	Beta-lactamase class A	Defense mechanisms [V]	5.31
COG0515	Serine/threonine protein kinase	Signal transduction mechanisms [T]	3.54
COG3547	Transposase	Mobilome: prophages, transposons [X]	1.77
COG0251	Enamine deaminase RidA/Endoribonuclease Rid7C, YjgF/YER057c/UK114 family	Defense mechanisms [V]	0.88
COG0397	Protein adenylyltransferase (AMPylase) SelO/YdiU (selenoprotein O)	Posttranslational modification, protein turnover, chaperones [O]	0.88
COG3250	Beta-galactosidase/beta-glucuronidase	Carbohydrate transport and metabolism [G]	0.88

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	51.33 %
Unclassified	root	N/A	48.67 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Terrabacteria group	clade	All Organisms → cellular organisms → Bacteria → Terrabacteria group	46.02 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinobacteria	phylum	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	42.48 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia	class	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	35.40 %
Bryobacterales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
unclassified Actinomycetia	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia	6.19 %
Streptosporangiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales	3.54 %
Streptomycetales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales	2.65 %
Pseudonocardiales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales	1.77 %
Micrococcales	order	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales	0.88 %
Solibacteraceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.19 %
Treboniaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae	2.65 %
Streptomycetaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae	2.65 %
Pseudonocardiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae	1.77 %
Streptosporangiaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae	0.88 %
Candidatus Sulfopaludibacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter	0.88 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.19 %
Streptomyces	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces	2.65 %
Trebonia	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia	2.65 %
Solihabitans	genus	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans	1.77 %
unclassified Candidatus Sulfopaludibacter	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter	0.88 %
unclassified Streptosporangiaceae	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae	0.88 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	1.77 %
unclassified Streptomyces	no rank	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces	1.77 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	0.88 %
Streptomyces actuosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces actuosus	0.88 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.88 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	48.67 %
Actinomycetia bacterium	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	6.19 %
Trebonia kvetii	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	2.65 %
Streptomyces sp. RPA4-5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. RPA4-5	1.77 %
Solihabitans fulvus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	1.77 %
Streptosporangiaceae bacterium NEAU-GS5	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	0.88 %
Streptomyces actuosus	species	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces actuosus	0.88 %
Candidatus Sulfopaludibacter sp. SbA4	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	0.88 %
Micrococcaceae	family	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
3300001384\|JGI20190J14840_1020065	Not Available	564	Open in IMG/M
3300001403\|JGI20205J14842_1017351	Not Available	806	Open in IMG/M
3300001454\|JGI20204J15135_1007047	Not Available	1086	Open in IMG/M
3300001867\|JGI12627J18819_10335498	All Organisms → cellular organisms → Bacteria	611	Open in IMG/M
3300005363\|Ga0008090_14268883	Not Available	501	Open in IMG/M
3300005435\|Ga0070714_100928344	Not Available	845	Open in IMG/M
3300005435\|Ga0070714_101145390	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	758	Open in IMG/M
3300005435\|Ga0070714_101699297	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	616	Open in IMG/M
3300005564\|Ga0070664_100913438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Pseudonocardiales → Pseudonocardiaceae → Solihabitans → Solihabitans fulvus	823	Open in IMG/M
3300005610\|Ga0070763_10277972	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	915	Open in IMG/M
3300005764\|Ga0066903_107226197	Not Available	575	Open in IMG/M
3300005921\|Ga0070766_11308662	Not Available	502	Open in IMG/M
3300006028\|Ga0070717_11483004	All Organisms → cellular organisms → Bacteria → Terrabacteria group	615	Open in IMG/M
3300006102\|Ga0075015_100856868	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	549	Open in IMG/M
3300006163\|Ga0070715_10020452	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2553	Open in IMG/M
3300006175\|Ga0070712_101607948	Not Available	568	Open in IMG/M
3300009522\|Ga0116218_1357628	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	652	Open in IMG/M
3300010048\|Ga0126373_10456892	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1313	Open in IMG/M
3300010048\|Ga0126373_13253366	Not Available	506	Open in IMG/M
3300010358\|Ga0126370_10976937	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	771	Open in IMG/M
3300010360\|Ga0126372_12953737	Not Available	527	Open in IMG/M
3300010376\|Ga0126381_103426924	Not Available	624	Open in IMG/M
3300010396\|Ga0134126_10227807	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2215	Open in IMG/M
3300012198\|Ga0137364_10123401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	1848	Open in IMG/M
3300012207\|Ga0137381_11773220	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Streptosporangiaceae → unclassified Streptosporangiaceae → Streptosporangiaceae bacterium NEAU-GS5	507	Open in IMG/M
3300016294\|Ga0182041_10041710	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	3037	Open in IMG/M
3300016319\|Ga0182033_11088779	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. RPA4-5	713	Open in IMG/M
3300016341\|Ga0182035_10066862	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	2510	Open in IMG/M
3300016341\|Ga0182035_11233825	Not Available	668	Open in IMG/M
3300016341\|Ga0182035_11971944	Not Available	530	Open in IMG/M
3300016371\|Ga0182034_10853052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → unclassified Streptomyces → Streptomyces sp. RPA4-5	781	Open in IMG/M
3300016387\|Ga0182040_10537089	Not Available	939	Open in IMG/M
3300017924\|Ga0187820_1082658	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	905	Open in IMG/M
3300017937\|Ga0187809_10175345	Not Available	751	Open in IMG/M
3300017974\|Ga0187777_10745476	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	697	Open in IMG/M
3300018017\|Ga0187872_10162853	Not Available	1057	Open in IMG/M
3300018026\|Ga0187857_10124880	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1237	Open in IMG/M
3300018044\|Ga0187890_10009436	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6248	Open in IMG/M
3300018044\|Ga0187890_10625589	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	607	Open in IMG/M
3300020021\|Ga0193726_1288906	Not Available	643	Open in IMG/M
3300020582\|Ga0210395_10130548	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1869	Open in IMG/M
3300021377\|Ga0213874_10213344	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	699	Open in IMG/M
3300021407\|Ga0210383_11140576	All Organisms → cellular organisms → Bacteria	657	Open in IMG/M
3300021407\|Ga0210383_11171758	Not Available	647	Open in IMG/M
3300021475\|Ga0210392_10480102	Not Available	914	Open in IMG/M
3300021477\|Ga0210398_11522447	Not Available	520	Open in IMG/M
3300025906\|Ga0207699_10078255	All Organisms → cellular organisms → Bacteria → Terrabacteria group	2042	Open in IMG/M
3300025929\|Ga0207664_11124747	Not Available	702	Open in IMG/M
3300027986\|Ga0209168_10273191	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	834	Open in IMG/M
3300028906\|Ga0308309_11121163	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	680	Open in IMG/M
3300030494\|Ga0310037_10102842	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1323	Open in IMG/M
3300030520\|Ga0311372_12963610	Not Available	515	Open in IMG/M
3300030707\|Ga0310038_10238655	Not Available	847	Open in IMG/M
3300031525\|Ga0302326_10073519	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6307	Open in IMG/M
3300031543\|Ga0318516_10089417	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1727	Open in IMG/M
3300031544\|Ga0318534_10475775	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	714	Open in IMG/M
3300031549\|Ga0318571_10096050	Not Available	963	Open in IMG/M
3300031564\|Ga0318573_10509048	Not Available	648	Open in IMG/M
3300031572\|Ga0318515_10167298	Not Available	1174	Open in IMG/M
3300031640\|Ga0318555_10310814	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	853	Open in IMG/M
3300031640\|Ga0318555_10743182	Not Available	530	Open in IMG/M
3300031668\|Ga0318542_10242732	Not Available	915	Open in IMG/M
3300031668\|Ga0318542_10462085	Not Available	658	Open in IMG/M
3300031680\|Ga0318574_10234796	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Sulfopaludibacter → unclassified Candidatus Sulfopaludibacter → Candidatus Sulfopaludibacter sp. SbA4	1059	Open in IMG/M
3300031680\|Ga0318574_10450275	Not Available	753	Open in IMG/M
3300031708\|Ga0310686_107773908	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	701	Open in IMG/M
3300031708\|Ga0310686_116281130	Not Available	523	Open in IMG/M
3300031713\|Ga0318496_10158742	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1236	Open in IMG/M
3300031719\|Ga0306917_11408829	Not Available	537	Open in IMG/M
3300031724\|Ga0318500_10591516	Not Available	562	Open in IMG/M
3300031744\|Ga0306918_10644398	Not Available	830	Open in IMG/M
3300031747\|Ga0318502_10019955	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	3232	Open in IMG/M
3300031747\|Ga0318502_10144401	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1353	Open in IMG/M
3300031748\|Ga0318492_10238608	Not Available	937	Open in IMG/M
3300031751\|Ga0318494_10245848	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1025	Open in IMG/M
3300031768\|Ga0318509_10128275	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1388	Open in IMG/M
3300031771\|Ga0318546_10605371	Not Available	771	Open in IMG/M
3300031782\|Ga0318552_10002604	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	6582	Open in IMG/M
3300031795\|Ga0318557_10385762	Not Available	644	Open in IMG/M
3300031797\|Ga0318550_10016508	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	2971	Open in IMG/M
3300031805\|Ga0318497_10025948	All Organisms → cellular organisms → Bacteria	2889	Open in IMG/M
3300031819\|Ga0318568_10307098	Not Available	985	Open in IMG/M
3300031821\|Ga0318567_10195704	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Micrococcales → Micrococcaceae	1128	Open in IMG/M
3300031821\|Ga0318567_10746199	All Organisms → cellular organisms → Bacteria	555	Open in IMG/M
3300031832\|Ga0318499_10196052	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptosporangiales → Treboniaceae → Trebonia → Trebonia kvetii	788	Open in IMG/M
3300031833\|Ga0310917_10293050	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	1100	Open in IMG/M
3300031845\|Ga0318511_10178561	Not Available	938	Open in IMG/M
3300031846\|Ga0318512_10525430	Not Available	601	Open in IMG/M
3300031860\|Ga0318495_10275223	Not Available	751	Open in IMG/M
3300031893\|Ga0318536_10623658	Not Available	538	Open in IMG/M
3300031896\|Ga0318551_10270904	Not Available	951	Open in IMG/M
3300031896\|Ga0318551_10369314	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	813	Open in IMG/M
3300031942\|Ga0310916_11316470	Not Available	594	Open in IMG/M
3300031946\|Ga0310910_11290742	Not Available	564	Open in IMG/M
3300031954\|Ga0306926_11616255	Not Available	743	Open in IMG/M
3300031981\|Ga0318531_10294460	Not Available	733	Open in IMG/M
3300032001\|Ga0306922_10313352	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium	1685	Open in IMG/M
3300032001\|Ga0306922_10788317	Not Available	994	Open in IMG/M
3300032009\|Ga0318563_10256912	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	944	Open in IMG/M
3300032025\|Ga0318507_10464854	Not Available	551	Open in IMG/M
3300032044\|Ga0318558_10607604	Not Available	546	Open in IMG/M
3300032055\|Ga0318575_10689535	Not Available	517	Open in IMG/M
3300032059\|Ga0318533_10798957	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → Streptomycetales → Streptomycetaceae → Streptomyces → Streptomyces actuosus	692	Open in IMG/M
3300032060\|Ga0318505_10269438	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	802	Open in IMG/M
3300032060\|Ga0318505_10418840	Not Available	633	Open in IMG/M
3300032065\|Ga0318513_10272674	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	821	Open in IMG/M
3300032094\|Ga0318540_10170688	Not Available	1045	Open in IMG/M
3300032160\|Ga0311301_11481440	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia	838	Open in IMG/M
3300032783\|Ga0335079_10954823	All Organisms → cellular organisms → Bacteria → Terrabacteria group	877	Open in IMG/M
3300033134\|Ga0335073_11718304	All Organisms → cellular organisms → Bacteria	591	Open in IMG/M
3300033289\|Ga0310914_10299236	All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria	1451	Open in IMG/M
3300033289\|Ga0310914_11542360	Not Available	568	Open in IMG/M
3300033290\|Ga0318519_10633626	Not Available	651	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	98.23%
Host-Associated	Host-Associated	1.77%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	92.04%
Aquatic	Environmental → Aquatic	6.19%
Plants	Host-Associated → Plants	1.77%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	90.27%
Freshwater	Environmental → Aquatic → Freshwater	5.31%
Peat	Environmental → Terrestrial → Peat	1.77%
Sediment	Environmental → Aquatic → Sediment	0.89%
Roots	Host-Associated → Plants → Roots	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	76.11%
Loam	Environmental → Terrestrial → Soil → Loam	11.50%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	5.31%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	2.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%
Soil	Host-Associated → Plants → Rhizosphere → Soil	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	58.41%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	14.16%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	7.08%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	4.42%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	3.54%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	2.65%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	2.65%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	1.77%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	1.77%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	0.89%
Tropical Rainforest	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	47.79%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	10.62%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	4.42%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	3.54%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	3.54%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	3.54%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Agricultural Soil	3.54%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Arctic Peat Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil	2.65%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	2.65%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	1.77%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	1.77%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	1.77%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	0.89%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	0.89%
Plant Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere	0.89%
Tropical Rainforest Soil	Environmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Tropical Rainforest Soil	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
3300001384	Arctic peat soil from Barrow, Alaska - NGEE Surface sample 53-3 shallow-072012	Environmental	Open in IMG/M
3300001403	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-2 shallow-092012	Environmental	Open in IMG/M
3300001454	Arctic peat soil from Barrow, Alaska - NGEE Surface sample F53-1 shallow-092012	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300005363	Tropical rainforest soil microbial communities from the Amazon Forest, Brazil, analyzing deforestation - Metatranscriptome F II A100 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300005435	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG	Environmental	Open in IMG/M
3300005564	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaG	Host-Associated	Open in IMG/M
3300005610	Warmed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WRM 3	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006163	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG	Environmental	Open in IMG/M
3300006175	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-1 metaG	Environmental	Open in IMG/M
3300009522	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_5_LS metaG	Environmental	Open in IMG/M
3300010048	Tropical forest soil microbial communities from Panama - MetaG Plot_11	Environmental	Open in IMG/M
3300010358	Tropical forest soil microbial communities from Panama - MetaG Plot_3	Environmental	Open in IMG/M
3300010360	Tropical forest soil microbial communities from Panama - MetaG Plot_6	Environmental	Open in IMG/M
3300010376	Tropical forest soil microbial communities from Panama - MetaG Plot_28	Environmental	Open in IMG/M
3300010396	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2	Environmental	Open in IMG/M
3300012198	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_20_16 metaG	Environmental	Open in IMG/M
3300012207	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_115_16 metaG	Environmental	Open in IMG/M
3300016294	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178	Environmental	Open in IMG/M
3300016319	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H	Environmental	Open in IMG/M
3300016341	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170	Environmental	Open in IMG/M
3300016371	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172	Environmental	Open in IMG/M
3300016387	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176	Environmental	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017937	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - ASW_4	Environmental	Open in IMG/M
3300017974	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_10_MG	Environmental	Open in IMG/M
3300018017	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_16_40	Environmental	Open in IMG/M
3300018026	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_100	Environmental	Open in IMG/M
3300018044	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_21_10	Environmental	Open in IMG/M
3300020021	Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? H2c1	Environmental	Open in IMG/M
3300020582	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-4-O	Environmental	Open in IMG/M
3300021377	Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R7	Host-Associated	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021475	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300025906	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)	Environmental	Open in IMG/M
3300025929	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300027986	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen07_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300028906	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 5 (v2)	Environmental	Open in IMG/M
3300030494	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)	Environmental	Open in IMG/M
3300030520	III_Palsa_N2 coassembly	Environmental	Open in IMG/M
3300030707	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG (v2)	Environmental	Open in IMG/M
3300031525	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - Palsa_T0_3	Environmental	Open in IMG/M
3300031543	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f20	Environmental	Open in IMG/M
3300031544	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f26	Environmental	Open in IMG/M
3300031549	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f24	Environmental	Open in IMG/M
3300031564	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f21	Environmental	Open in IMG/M
3300031572	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f19	Environmental	Open in IMG/M
3300031640	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f23	Environmental	Open in IMG/M
3300031668	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.168b4f23	Environmental	Open in IMG/M
3300031680	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f22	Environmental	Open in IMG/M
3300031708	FICUS49499 Metagenome Czech Republic combined assembly	Environmental	Open in IMG/M
3300031713	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f22	Environmental	Open in IMG/M
3300031719	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2)	Environmental	Open in IMG/M
3300031724	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f20	Environmental	Open in IMG/M
3300031744	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)	Environmental	Open in IMG/M
3300031747	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f22	Environmental	Open in IMG/M
3300031748	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22	Environmental	Open in IMG/M
3300031751	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f24	Environmental	Open in IMG/M
3300031768	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22	Environmental	Open in IMG/M
3300031771	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19	Environmental	Open in IMG/M
3300031782	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f20	Environmental	Open in IMG/M
3300031795	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f19	Environmental	Open in IMG/M
3300031797	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f23	Environmental	Open in IMG/M
3300031805	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f23	Environmental	Open in IMG/M
3300031819	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f21	Environmental	Open in IMG/M
3300031821	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.088b5f20	Environmental	Open in IMG/M
3300031832	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.109b1f25	Environmental	Open in IMG/M
3300031833	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF178	Environmental	Open in IMG/M
3300031845	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f18	Environmental	Open in IMG/M
3300031846	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f19	Environmental	Open in IMG/M
3300031860	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25	Environmental	Open in IMG/M
3300031893	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.117b4f28	Environmental	Open in IMG/M
3300031896	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.082b2f19	Environmental	Open in IMG/M
3300031942	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176	Environmental	Open in IMG/M
3300031946	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172	Environmental	Open in IMG/M
3300031954	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)	Environmental	Open in IMG/M
3300031981	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f25	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032009	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.066b5f19	Environmental	Open in IMG/M
3300032025	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f20	Environmental	Open in IMG/M
3300032044	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.065b5f20	Environmental	Open in IMG/M
3300032055	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f23	Environmental	Open in IMG/M
3300032059	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.053b4f27	Environmental	Open in IMG/M
3300032060	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f18	Environmental	Open in IMG/M
3300032065	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.171b2f20	Environmental	Open in IMG/M
3300032094	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f25	Environmental	Open in IMG/M
3300032160	Sb_50d combined assembly (MetaSPAdes)	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300033134	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.2	Environmental	Open in IMG/M
3300033289	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108	Environmental	Open in IMG/M
3300033290	Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
JGI20190J14840_10200652	3300001384	Arctic Peat Soil	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETGALHDRIPQAMGIAVRDIDSGAAA
JGI20205J14842_10173511	3300001403	Arctic Peat Soil	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETGALHDRIPQAMGIAVRDIDSGAA
JGI20204J15135_10070471	3300001454	Arctic Peat Soil	MTQPAGPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLGGGSITRRFESGSLHDRIPQAMGVAIRDIDSGAATVLPTVWLVRRADGRIIG
JGI12627J18819_103354982	3300001867	Forest Soil	MTPPAGPDSADWERRWTIDAGSVTLQPVTRRMAQAVLDGGPSTGTFADGARHDRIPGAMAAAIRDIDS
Ga0008090_142688831	3300005363	Tropical Rainforest Soil	MTGPAAPDSAAWQRRWTIDAGSVTLRPVTRRIAQDVLDGGPITRTFEEGSRHDKIPQAMGIAIRDIDSG
Ga0070714_1009283442	3300005435	Agricultural Soil	MAQSAVVDSADWQRRWRIEAGSVTIEPVTRRIARGVLDGGPVMDTFADGALHDRIPQAMGIALRDLDSGAAAVVPAVWLIIRR
Ga0070714_1011453902	3300005435	Agricultural Soil	MTQPEVLDSADWERCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSG
Ga0070714_1016992971	3300005435	Agricultural Soil	MTQPAVVDSADWQRRWTIEAGSVTIQPVTRRIARGVLDGGPVVHAFAEGALHGRIPQAMGIALRDLDSGAAAVVPAVWLIVRR
Ga0070664_1009134381	3300005564	Corn Rhizosphere	MTQPEVLDSADWGRCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSGAAAVLPT
Ga0070763_102779722	3300005610	Soil	VSPLQPQPAGPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLDGGSITRRFESGSLHDRIPQAMGVAIRDIDS
Ga0066903_1072261972	3300005764	Tropical Forest Soil	MGQRAVPDSAAWQRRWTIDAGAVALEPVTRRMAQGVLDGGPITTRFEQGALHARIPQAMGIAIRDIDSGAAATLPTVWLIIRRADARILGDI
Ga0070766_113086621	3300005921	Soil	MTEPVVPDSADWQRRWTIEAGRVTLRPVTRRIAQAVIDGEPITRRFEQGALHDLIPGLMGFAIRDIDS
Ga0070717_114830041	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MTQPEVLDSADWGRCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSGAAAVL
Ga0075015_1008568682	3300006102	Watersheds	MTQPAVPDSADWQRRWTIDAGSVTIRPVTRRLAHDVLDGGPITREFEEGSLHDRLPQAMGIAIRDINSGAAAVL
Ga0070715_100204526	3300006163	Corn, Switchgrass And Miscanthus Rhizosphere	MTQPEVLDSADWGRCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSGAAA
Ga0070712_1016079481	3300006175	Corn, Switchgrass And Miscanthus Rhizosphere	MTQPEVLDSADWGRCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSG
Ga0116218_13576282	3300009522	Peatlands Soil	MTQPAVPDSADWQRRWTIDAGSVTIRPVTRRLAHDVLDGGPITREFEEGSLHDRLPQAMGIAIRDINSG
Ga0126373_104568924	3300010048	Tropical Forest Soil	MTQPAAPDSADWQRRWVIDAGNVILQPVTRRMAREVLAGGRITNKFEPGSLHDRIPQAMGIAIRDIDSGAAAVVPTVWFVVRRADLQILGDLGTHGP
Ga0126373_132533662	3300010048	Tropical Forest Soil	MTQPAAPDSADWQRRWVIDAGSVILQPVTRRMAREVLAGGRITNKFEPGSLHDRIPQAMGIAIRDIDSGAAAVVPTVWFVVRRADLQILGDLGTHGP
Ga0126370_109769371	3300010358	Tropical Forest Soil	VPDSADWQRRWTIDAGSVMLQPVTLRIAHDVLDGGSITRAFEEGGLHDRIPQAMGIAIRDID
Ga0126372_129537371	3300010360	Tropical Forest Soil	MAQPAVPDSADWQRRWTIDAGGVTLQPVTRRIAQDVLEGGPITHQFEPGALHDRIPQAMGIAI
Ga0126381_1034269242	3300010376	Tropical Forest Soil	MTQPAGPDSADWQRRWRIDAGSVALEPVTRRIGQDVIDGGPITRRFAEGALHDRIPQAMR
Ga0134126_102278075	3300010396	Terrestrial Soil	MTQPEVLDSADWERCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSGAAAVLP
Ga0137364_101234012	3300012198	Vadose Zone Soil	MAQPAGLDSADWQRRWTIDAGSVTLQPVTRRIAQAVLDGGPITREFEKGSLHDRIPQAMGFAIHDIDSGAAAVLPTVWLVVRRA*
Ga0137381_117732201	3300012207	Vadose Zone Soil	MTPSAVPDSTSWQHRWTIDAGSVLLQPVTRRLAQDVLDGGPVTRTFEEGALHDRIPQAMGIAIRDIDVGSAAALPTVWVIVRR
Ga0182041_100417106	3300016294	Soil	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRHIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVW
Ga0182033_110887792	3300016319	Soil	MGQRAVPDSADWERRWTIDAGTVALEPVTRRMAQGVLDGGPITASFEQGALHARIPQAMGIAIRDIDSGAAATLPTMWFIIRP
Ga0182035_100668624	3300016341	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGRITDKFEPGSLHDRIPQAMGIAIRDIDSGAAALVPTVWLVVR
Ga0182035_112338251	3300016341	Soil	MGQRAVTYSADWERRWTIDAGTVALAPVTRRMAQGVLDGGPITASFEQGALHARITQAMGIAIRDIDSGAAATLPTVWFIIR
Ga0182035_119719441	3300016341	Soil	MGQRAVPDSADWQRRWTIDAGAVALEPVTRSMAQGVLDSGPITARFDDGALHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADARILGDIGLHGP
Ga0182034_108530522	3300016371	Soil	MGQRAVPDSADWERRWTIDAGTVALEPVTRRMAQGVLDGGPITASFEQGALHARIPQAMGIAIRDIDSGAAATLPTVWF
Ga0182040_105370891	3300016387	Soil	VTEPAEPDSVDWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAATVLPTVWLIVRRADGRIIGDL
Ga0187820_10826582	3300017924	Freshwater Sediment	MSWAAGLQYGRKASMTQPGVPDSADWQRRWTIDAGSMTLRPVTRRMAQDVLDGGPVTRRFAEGALHDRIPQAMGVAIRDIDSGAAAVLPTVWLVVRRADGRIVGDLGTHGP
Ga0187809_101753452	3300017937	Freshwater Sediment	MTQPAVPDSPDWQRRWTIDAGSVSLQPVTRRIAQAVLDSGPITRKFESGALHDRIPQAMGVAILHIDSGAAAVLP
Ga0187777_107454762	3300017974	Tropical Peatland	MTQPAVPDSADWQRRWTIDAGSVTLQPVTRRLAHDVLDGEPITRTFEEGSLHDRIPQAMG
Ga0187872_101628531	3300018017	Peatland	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETGALHDRIPQAMGVAIRDIDSGAAAVLPTVWLIVRRADERVLGDPGTHGPP
Ga0187857_101248803	3300018026	Peatland	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETGALHDRIPQAMSIAIRDIDSGTAAVLPTV
Ga0187890_100094366	3300018044	Peatland	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETRALHDRIPQAMSIAIRDIDSGTAAVLPTVWLIVRRADEWVL
Ga0187890_106255891	3300018044	Peatland	MTQPAVPGSANWQRQWTIDAGDVLLQPVTRRIAEDVLAGGPITRTFETGALHDRIPQAMSIAIRDIDSGTAAVLPTVWLIVRRADEWVL
Ga0193726_12889061	3300020021	Soil	MTQPEIPDSADWEQRWTIDAGSVLLRPVTRRIARQVLDGGPASPAFADGALHARLPQAMGIAIRDIDSGAAAALPTVWVIVRREDALIVGDLGT
Ga0210395_101305481	3300020582	Soil	VTQQAGPDSADWQRRWSIDAGSVTLQPVTRSIAQGVLGGGPITRDFEEGALHDRMSYVMGFAIRDIDSG
Ga0213874_102133441	3300021377	Plant Roots	MTQPATPDSADWQRRWTIDAGTVTLEPVTRGIAAAVLGGGPVTPEFEDGALHDRIPQALGLAVRDIASGAAAVLPTVWFIVRR
Ga0210383_111405762	3300021407	Soil	MTGAAAPDSAGWQRHWTIDAGTVTLQPVTRGFAEAVLGGGPISPGFEDGALHDRIPQALGFAMRDIDSGAFAV
Ga0210383_111717581	3300021407	Soil	VSPLQPQPAGPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLDGGSITRRFESGSLHDRIPQAMGVAIRDIDSGAAAVLPTVWLVV
Ga0210392_104801022	3300021475	Soil	VSPLQPQPAGPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLDGGPITRTFESGSLHDRIPQAMGVAIRDIDS
Ga0210398_115224472	3300021477	Soil	VSPLQPQPAGPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLDGGLIMRRFESGSLHDRIPQAMGVAIRDIDSGAAAVLPTVWLVVRRADGQILGD
Ga0207699_100782554	3300025906	Corn, Switchgrass And Miscanthus Rhizosphere	MTQPEVLDSADWERCWAIEAGTVTLQPVTRRIAHAVLDGGPITRRFAEGALHDRIPQAMGVAIRDIDSGAAAVLPTVWLVVHRGDGRIIGDIGTHGPPAHEGCV
Ga0207664_111247471	3300025929	Agricultural Soil	MAQSAVVDSADWQRRWRIEAGSVTIEPVTRRIARGVLDGGPVMDTFADGALHGRIPQAMGIALRDLDSGAAAVVRA
Ga0209168_102731911	3300027986	Surface Soil	MTQPAVPDSADWQRRWTVDAGSVMLRPVTRRLAREVLDRGPITRTFEEEGSLHDRIPQAMGVAIRDIESGAAAVLPTVWLTVRRADGRVLGD
Ga0308309_111211631	3300028906	Soil	VTQPAGPDTAEWQRRWTIDAGAVILEPVTRSLAQAVLDGGPGPREFEDGARHDRIRYAMGFAIRD
Ga0310037_101028422	3300030494	Peatlands Soil	MTHPAVPDSADWQRRWTIDAGSVSLQPVTRRIAQAVLEGEPITRKFESGALHDRIPQAMGFAILHIDSGAAAIL
Ga0311372_129636101	3300030520	Palsa	MTQPAVPDSADWERRWTIDAGSMTLQPVTRGIAHAVLDGGPITSMFEEGALHDRIPQAMDVAIRDIDSGAAAVLPTVWLMVRSADGRIIGDI
Ga0310038_102386551	3300030707	Peatlands Soil	VTQPAVPDSADWERRWTIDAGSVTLQPVTRRVAHAVLDGGPITSTFEEGALHDRIPQAMGVAIRDIDSGAAAFLPTVWLMVRRWSAALTGGSSA
Ga0302326_100735191	3300031525	Palsa	MTQPAVPDSADWERRWTIDAGSMTLQPVTRGIAHAVLDGGPITSMFEEGALHDRIPQAMDVAIRDIDSGAAAVLPTVWLMVRSADG
Ga0318516_100894174	3300031543	Soil	VTEPAEPDCADWQRRWTIDAPSVTLQPVTRRIAQAVLDGRPITHTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRAD
Ga0318534_104757751	3300031544	Soil	MTQPPVPDSADWERRWTIDAGSVSLRPVTREVAHAVLDGGPITGMFENGALHDRIPQAMGVAIRDIDSGAAAALPTVWLVVR
Ga0318571_100960501	3300031549	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAM
Ga0318573_105090481	3300031564	Soil	MTRPEALDSGDWQRRWVIDAGSVMLQPVTRRMAREVLAGGLITHKFEQGSLHDRIPQAMGIAIRDIDSGAAA
Ga0318515_101672981	3300031572	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPTVWLVVRRADG
Ga0318555_103108141	3300031640	Soil	MGQRAVPDSADWQRRWTIDAGAVALEPVTRSMAQGVLDSGPITARFEQGALHDRIAQAMGIAIRDIDSGAAATLPTVWLVIRRADARILGDIGLHGPPGHQGSVE
Ga0318555_107431821	3300031640	Soil	VTQPAPPGSADWQRRWTIDAGSVMLLPVTRRIAQGVLDGGPITRTFEEGSRHDRIAQAMGIAIRDIDSGAAAVLPAVWLIVRRADGRILGDLGGPRPARQPGLRRDRLQPRPV
Ga0318542_102427321	3300031668	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAA
Ga0318542_104620851	3300031668	Soil	MGQRAVPDSADWQHRWTIDAGTVALEPVTRRIAHGVLDRGPITARFDDGALHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADARILGDIGLHGPPDNK
Ga0318574_102347962	3300031680	Soil	MAQAAGPDSAGWQRRWTIDAGSVALEPVTRRVAQDVLDGGPITRTFEKGSRHDRIAQAMGIAIRDIDSG
Ga0318574_104502751	3300031680	Soil	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRAD
Ga0310686_1077739082	3300031708	Soil	MAQPAGPDSADWQRRWTIEAGSVTLRPVTRRIAQAVLDGGPIMRRFEEGSLHDRIPQAMGVAIRDIDSGAAAVLPTVWLVVRRADGRI
Ga0310686_1162811301	3300031708	Soil	MTQPAVPGPANWQRQWTIDAGDVLLQPVTRLIAEDVLAGGPITRTFETGALHDRILQAMGIAIRDIDSGAAAILPTVWLIVRRADERILGDLG
Ga0318496_101587421	3300031713	Soil	MTQPPVPDSADWERRWTIDAGSVSLRPVTREVAHAVLDGGPITGMFENGALHDRIPQAMGVAIRDI
Ga0306917_114088292	3300031719	Soil	MTRPEALDSGDWQRRWVIDAGSVMLQPVTRRMAREVLAGGLITHKFEQGSLHDRIPQAMGIAIRDIDSGAAALVPTVWLVVRRADGQIL
Ga0318500_105915161	3300031724	Soil	MGQRAVPDSADWQHRWTIDAGTVALEPVTRRIAHGVLDRGPITARFDDGALHDRIPQAMGIAIR
Ga0306918_106443981	3300031744	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPTVWLVVRRADGRIIGDIG
Ga0318502_100199551	3300031747	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGRITDKFEPGSLHDRIPQAMGIAIRDIDSGAAALVPTVWLVVRRAD
Ga0318502_101444012	3300031747	Soil	MTQPPVPDSADWERRWTIDAGSVSLRPVTREVAHAVLDGGPITGMFENGALHDRIPQAMGVAIRDIDSGAAAALPTVWLVVRRADGRIIGDIGTHGP
Ga0318492_102386083	3300031748	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPT
Ga0318494_102458481	3300031751	Soil	MGQRPVPDSADWQRRWTIDAGTVALEPVTRRIAHGVLDRGPITARFEDGTLHDRIPQAMGIAIRDIDSGAAAALPTV
Ga0318509_101282752	3300031768	Soil	MTQPPVPDSADWERRWTIDAGSVSLRPVTREVAHAVLDGGPITGMFENGALHDRIPQAMGVAIRDIDSGAAAALPTVWLVVRRADGRIVGDIG
Ga0318546_106053712	3300031771	Soil	MTQPAGPDSADWQRRWTIDAGSVTLEPVTRRTGQDVIDGGPITRRFAEGALHDRIPQAMGIAIRDIDSGAAAALPT
Ga0318552_100026047	3300031782	Soil	MTQPAGPDSADWQRRWTIDAGSVTLQPVTRHVAQAVLDGGPVTRDFEDGALHDRIPQAMGVAIRDIDSGAAAVLPTVWLIVGRADGRILGD
Ga0318557_103857621	3300031795	Soil	MAQQADLDSAGWQRRWTIDAGSVTLQPVTRRVAQAVLDGGTITGTFEEGALHDGIPQAMGIAIRDIDSGAAAALPTVWLVVRRADGRVVGD
Ga0318550_100165081	3300031797	Soil	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRHIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRADGRIIGDLGTHGPP
Ga0318497_100259481	3300031805	Soil	MAQQADLDSAGWQRRWTIDAGSVTLQPVILRVAQAVLDGGTITGTFEEGALHDGIPQAMGIAIRDIDSGAAAALPTVWLVVRRADGRVVGD
Ga0318568_103070981	3300031819	Soil	MAQAAGPDSAGWQRRWTIDAGSVALEPVTRRVAQDVLDGGPITRRFAEGALHGRIPQAMGIAIRDIDSGTAAALPTVWLVVRRTDGQI
Ga0318567_101957041	3300031821	Soil	MTQPAGPDSADWQRRWTIDAGSVTLQPVTRHVAQAVLDGGPVTRDFEDGALHDRIPQAMGVAIRDIDSGAAAVLPTVWLIVGRADGRILGDLGTHG
Ga0318567_107461991	3300031821	Soil	MTQPEVPDSADWQRHWTIDAGSVTLRPVTRRMAQDVLDGGPVTHRFEEGALHDRIPQAM
Ga0318499_101960521	3300031832	Soil	MAQAAGPDSAGWQRRWTIDAGSVALEPVTRRVAQDVLDGGPITRRFAEGALHGRIPQAMGIAIRDIDSGTAAALPTVW
Ga0310917_102930503	3300031833	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGLITHKFEQGSLHDRIPQAMGIAIRDIDSGAAALVPTVWLVVRRA
Ga0318511_101785611	3300031845	Soil	MTQPAGPDSADWQRRWTIDAGSVTLQPVTRHVAQAVLDGGPVTRDFEDGALHDRIPQAMGVAIRDID
Ga0318512_105254301	3300031846	Soil	MGQRAVPDSADWERRWTIDAGTVALEPVTRRMAQGVLDGGTITASFEQGALHARITQAMGIAIRDIDSGAAATLPTVWFIIRPADARILGDIGLH
Ga0318495_102752232	3300031860	Soil	VTEPAEPDSVDWQRRWTIDAPSVTLQPVTRRIAQAVLDGRPITHTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRADGRIIG
Ga0318536_106236581	3300031893	Soil	MTQPPVPDSADWERCWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPTVWLVVRRADGRIIGDIGT
Ga0318551_102709043	3300031896	Soil	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRHIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDID
Ga0318551_103693141	3300031896	Soil	MMTQPAGPDSADWQRRWTIDAATVALQPVTRRLAQDVIDGGPVTRSFEDGALHDRIPQAMGIAIRDIDSGAAALLPTVWLIVRRADGRFIGDLGTHGPPGS
Ga0310916_113164701	3300031942	Soil	MGQRAVPDSADWQHRWTIDAGTVALEPVTRRIAHGVLDRGPITARFDDGALHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADA
Ga0310910_112907421	3300031946	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGRITDKFEPGSLHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADARILGDIGL
Ga0306926_116162551	3300031954	Soil	VTQPAPPGSADWQRRWTIDAGSVMLLPVTRRIAQGVLDGGPITRTFEEGSRHDRIAQAMGIAI
Ga0318531_102944602	3300031981	Soil	VTEPAEPDCADWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRADGRIIGDLGTHGPP
Ga0306922_103133522	3300032001	Soil	MGQRAVPDSADWERRWTIDAGTVALEPVTRRMAQGVLDGGPITASFEQGALHARIPQAMGIAIRDIDSGAAASLPTVWFIIRPADARILGDIGLHG
Ga0306922_107883171	3300032001	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPTVWLVVRRADGRI
Ga0318563_102569121	3300032009	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGRITDKFEPGSLHDRIPQAMGIAIRDIDSGAAALVPTVWLVVRRADGQILGDLG
Ga0318507_104648541	3300032025	Soil	MGQRAVPDSADWQHRWTIDAGTVALEPVTRRIAHGVLDRGPITARFDDGALHDRIPQAMG
Ga0318558_106076042	3300032044	Soil	VTEPAEPDSADWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAAAVLPTVWLIVRRADG
Ga0318575_106895351	3300032055	Soil	MGQRAVPDSADWQRRWTIDAGAVALEPVTRSMAQGVLDSGPITARFEQGALHDRIAQAMGIAIRDIDSGAA
Ga0318533_107989571	3300032059	Soil	VTEPAEPDCADWQRRWTIDAPSVTLQPVTRRIAQAVLDGGPITRTFEEGALHDRIPQAMGIALRDIDSGAATVLPTVWLIVRRADGRIIGDLG
Ga0318505_102694381	3300032060	Soil	MTQPEALDSGHWQRRWVIDAGSVMLQPVTRRMAREVLAGGRITDKFEPGSLHDRIPQAMGIAIRDIDSGAAALVPT
Ga0318505_104188402	3300032060	Soil	MGQRPVPDSADWQRRWTIDAGTVALEPVTRRIAHGVLDRGPITARFEDGTLHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADARILGDIGLHGP
Ga0318513_102726741	3300032065	Soil	MGQRAVPDSADWERRWTIDAGTVALEPVTRRMAQGVLDGGPITASFEQGALHARIPQAMGIAIRDIDSGAAATLPTVWFIIRPADARILGDIGLHGPP
Ga0318540_101706883	3300032094	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGFAIRDIDSGAAAVLPAVWLVVRRAVGRAV
Ga0311301_114814402	3300032160	Peatlands Soil	MRQPAVPDSADWQRRWTIDAGTVTLRPVTRRIAQAVLDGGPITREFEEGSLHERIPQAMGFAIRDIDSGAAAVLPTVWLVVRRADGRILGDLGTH
Ga0335079_109548232	3300032783	Soil	MAQPAVPDSADWQRRWTIDAEAVTLQPVTRRIAHDVLDGGPVTRRFEPGSLHDRIPQAMGVAIRDIESGAAAVVPTVWLIARGADGRSI
Ga0335073_117183041	3300033134	Soil	MTQSAVPDSADWQRRWTIEAGSVTLRPVTRRIAQAVVDGEAITRTFEQGALHDRIPQAMGFAIRDIDSGAAAVLPTVWLVVRRADGQIVGDLGTHGPA
Ga0310914_102992363	3300033289	Soil	MGQRAVPDSADWQHRWTIDAGTVALEPVTRRIAHGVLDRGPITARFDDGALHDRIPQAMGIAIRDIDSGAAAALPTVWLIIRRADARILGDIG
Ga0310914_115423602	3300033289	Soil	MTQPAGPDSADWQRRWTIDAGSVTLQPVTRHVAQAVLDGGPVTRDFEDGALHDRIPQAMGVAIR
Ga0318519_106336262	3300033290	Soil	MTQPPVPDSADWERRWTIDAGSMLLRPVTRHVAHAVIDGGPITGTFEKGALHDRIPQAMGIAIRDIDSGAAAILPTVWLVVRRADGR

Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083341

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences