NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F083317

Metagenome / Metatranscriptome Family F083317

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083317
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 37 residues
Representative Sequence MLATLIAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Number of Associated Samples 105
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 99.12 %
% of genes near scaffold ends (potentially truncated) 99.12 %
% of genes from short scaffolds (< 2000 bps) 92.92 %
Associated GOLD sequencing projects 101
AlphaFold2 3D model prediction Yes
3D model pTM-score0.46

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (97.345 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil
(15.929 % of family members)
Environment Ontology (ENVO) Unclassified
(38.053 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(46.018 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Fibrous Signal Peptide: No Secondary Structure distribution: α-helix: 53.85%    β-sheet: 0.00%    Coil/Unstructured: 46.15%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.46
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00119ATP-synt_A 92.04
PF13450NAD_binding_8 1.77
PF00430ATP-synt_B 0.88
PF12697Abhydrolase_6 0.88
PF13637Ank_4 0.88
PF01047MarR 0.88
PF00137ATP-synt_C 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0356FoF1-type ATP synthase, membrane subunit aEnergy production and conversion [C] 92.04
COG0636FoF1-type ATP synthase, membrane subunit c/Archaeal/vacuolar-type H+-ATPase, subunit KEnergy production and conversion [C] 0.88
COG0711FoF1-type ATP synthase, membrane subunit b or b'Energy production and conversion [C] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms97.35 %
UnclassifiedrootN/A2.65 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2140918008|ConsensusfromContig181898All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria986Open in IMG/M
3300000891|JGI10214J12806_10667908All Organisms → cellular organisms → Bacteria528Open in IMG/M
3300000955|JGI1027J12803_108984235All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales1055Open in IMG/M
3300002070|JGI24750J21931_1091744All Organisms → cellular organisms → Bacteria515Open in IMG/M
3300004114|Ga0062593_101618022All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli704Open in IMG/M
3300005543|Ga0070672_100208635All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1635Open in IMG/M
3300005562|Ga0058697_10458469All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria643Open in IMG/M
3300005564|Ga0070664_100562136All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1055Open in IMG/M
3300005576|Ga0066708_11034688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria510Open in IMG/M
3300005614|Ga0068856_100081812All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales3204Open in IMG/M
3300005616|Ga0068852_102100870All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → unclassified Solirubrobacter → Solirubrobacter sp. URHD0082587Open in IMG/M
3300005764|Ga0066903_105023984All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia701Open in IMG/M
3300005842|Ga0068858_102275864All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales536Open in IMG/M
3300006038|Ga0075365_11113967All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia556Open in IMG/M
3300006046|Ga0066652_102071697All Organisms → cellular organisms → Bacteria505Open in IMG/M
3300006049|Ga0075417_10665881All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales533Open in IMG/M
3300006163|Ga0070715_10326728All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia830Open in IMG/M
3300006755|Ga0079222_11562802All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales623Open in IMG/M
3300006797|Ga0066659_10735875All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia809Open in IMG/M
3300006800|Ga0066660_11159045All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales609Open in IMG/M
3300006871|Ga0075434_100482362All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1261Open in IMG/M
3300006881|Ga0068865_100719251All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales855Open in IMG/M
3300006904|Ga0075424_100052106All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia4276Open in IMG/M
3300006904|Ga0075424_101884701All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia → Solirubrobacterales → Solirubrobacteraceae → Solirubrobacter → Solirubrobacter soli632Open in IMG/M
3300009012|Ga0066710_102048922All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria845Open in IMG/M
3300009038|Ga0099829_11472354All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria562Open in IMG/M
3300009094|Ga0111539_10269673All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1981Open in IMG/M
3300009098|Ga0105245_11622231Not Available699Open in IMG/M
3300009101|Ga0105247_11621182All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria532Open in IMG/M
3300009174|Ga0105241_11653866All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria621Open in IMG/M
3300009177|Ga0105248_10764504All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1090Open in IMG/M
3300009553|Ga0105249_11609083All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria722Open in IMG/M
3300010040|Ga0126308_10678114All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria707Open in IMG/M
3300010043|Ga0126380_10647150All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria841Open in IMG/M
3300010077|Ga0127437_155226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria525Open in IMG/M
3300010116|Ga0127466_1102689All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria526Open in IMG/M
3300010323|Ga0134086_10333564All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria596Open in IMG/M
3300010333|Ga0134080_10494147All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria580Open in IMG/M
3300010364|Ga0134066_10368510All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria538Open in IMG/M
3300010371|Ga0134125_12277684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria589Open in IMG/M
3300010375|Ga0105239_10687226All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1170Open in IMG/M
3300010396|Ga0134126_10189797All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2466Open in IMG/M
3300010396|Ga0134126_11357353All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria786Open in IMG/M
3300011119|Ga0105246_10498894All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1033Open in IMG/M
3300012200|Ga0137382_11338962All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria504Open in IMG/M
3300012353|Ga0137367_10911656All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria605Open in IMG/M
3300012363|Ga0137390_11282148All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria679Open in IMG/M
3300012469|Ga0150984_114139220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1692Open in IMG/M
3300012489|Ga0157349_1035032All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria541Open in IMG/M
3300012513|Ga0157326_1046688All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria624Open in IMG/M
3300012896|Ga0157303_10060938All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria807Open in IMG/M
3300012897|Ga0157285_10088920All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria830Open in IMG/M
3300012948|Ga0126375_11134562All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria646Open in IMG/M
3300012948|Ga0126375_11849880All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria528Open in IMG/M
3300012972|Ga0134077_10177904All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300012976|Ga0134076_10272861All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300012987|Ga0164307_10600475All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria848Open in IMG/M
3300013104|Ga0157370_11021053All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria748Open in IMG/M
3300013104|Ga0157370_11615723All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria582Open in IMG/M
3300013105|Ga0157369_10564638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1176Open in IMG/M
3300013105|Ga0157369_11168394All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria786Open in IMG/M
3300013296|Ga0157374_10072484All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria3249Open in IMG/M
3300015357|Ga0134072_10173534All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria727Open in IMG/M
3300015374|Ga0132255_100348263All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2145Open in IMG/M
3300017657|Ga0134074_1257174All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria629Open in IMG/M
3300018056|Ga0184623_10379017All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria628Open in IMG/M
3300018071|Ga0184618_10263737All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria730Open in IMG/M
3300018072|Ga0184635_10064685All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1423Open in IMG/M
3300019361|Ga0173482_10329088All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria684Open in IMG/M
3300020081|Ga0206354_10418099All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1555Open in IMG/M
3300022467|Ga0224712_10048100All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1645Open in IMG/M
3300023069|Ga0247751_1049496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria703Open in IMG/M
3300023077|Ga0247802_1064283All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria598Open in IMG/M
3300025898|Ga0207692_10509449All Organisms → cellular organisms → Bacteria765Open in IMG/M
3300025899|Ga0207642_10464987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria769Open in IMG/M
3300025906|Ga0207699_10772198All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria706Open in IMG/M
3300025911|Ga0207654_10296482Not Available1098Open in IMG/M
3300025921|Ga0207652_10924492All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria770Open in IMG/M
3300025927|Ga0207687_11907746All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria508Open in IMG/M
3300025939|Ga0207665_11048579All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria649Open in IMG/M
3300025940|Ga0207691_10396854All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1177Open in IMG/M
3300025940|Ga0207691_10560297All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria968Open in IMG/M
3300025972|Ga0207668_10057756All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia2709Open in IMG/M
3300026023|Ga0207677_10847313All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria821Open in IMG/M
3300026078|Ga0207702_10874496All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria890Open in IMG/M
3300026295|Ga0209234_1087092All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1184Open in IMG/M
3300027725|Ga0209178_1195129All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria715Open in IMG/M
3300027874|Ga0209465_10361777All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria727Open in IMG/M
3300027903|Ga0209488_11184666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300028379|Ga0268266_10145220All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2132Open in IMG/M
3300028380|Ga0268265_12715623All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria500Open in IMG/M
3300028573|Ga0265334_10136942All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria869Open in IMG/M
3300028707|Ga0307291_1032638All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1223Open in IMG/M
3300028707|Ga0307291_1101787All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria716Open in IMG/M
3300028713|Ga0307303_10133927All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria587Open in IMG/M
3300028717|Ga0307298_10091639All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria859Open in IMG/M
3300028755|Ga0307316_10199971All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria720Open in IMG/M
3300028755|Ga0307316_10390028All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria515Open in IMG/M
3300028768|Ga0307280_10229158All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria663Open in IMG/M
3300028793|Ga0307299_10360578All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria545Open in IMG/M
3300028802|Ga0307503_10074666All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Actinomycetia → unclassified Actinomycetia → Actinomycetia bacterium1374Open in IMG/M
3300028814|Ga0307302_10111928All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria → Thermoleophilia1308Open in IMG/M
3300028884|Ga0307308_10023330All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria2852Open in IMG/M
3300030902|Ga0308202_1005828All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1543Open in IMG/M
3300031096|Ga0308193_1094550All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria506Open in IMG/M
3300031226|Ga0307497_10509907All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria595Open in IMG/M
3300031712|Ga0265342_10405206All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria704Open in IMG/M
3300032770|Ga0335085_12326758All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria535Open in IMG/M
3300032782|Ga0335082_10719314All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria860Open in IMG/M
3300034090|Ga0326723_0190987All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria906Open in IMG/M
3300034659|Ga0314780_194613Not Available526Open in IMG/M
3300034666|Ga0314788_101264All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria648Open in IMG/M
3300034820|Ga0373959_0028684All Organisms → cellular organisms → Bacteria → Terrabacteria group → Actinobacteria1112Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil15.93%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil7.96%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil5.31%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil4.42%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere4.42%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere3.54%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere3.54%
Groundwater SedimentEnvironmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment2.65%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil2.65%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil2.65%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere2.65%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere2.65%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil1.77%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil1.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil1.77%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere1.77%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere1.77%
Switchgrass RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere1.77%
Serpentine SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil0.89%
Unplanted SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Unplanted Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Soil0.89%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere0.89%
Peat SoilEnvironmental → Terrestrial → Peat → Unclassified → Unclassified → Peat Soil0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Arabidopsis Rhizosphere0.89%
Corn, Switchgrass And Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere0.89%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere0.89%
Rhizosphere SoilHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere Soil0.89%
Corn RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere0.89%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere0.89%
AgaveHost-Associated → Plants → Phylloplane → Unclassified → Unclassified → Agave0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2140918008Permafrost microbial communities from permafrost in Bonanza Creek, Alaska - Bog_allEnvironmentalOpen in IMG/M
3300000891Soil microbial communities from Great Prairies - Wisconsin, Continuous corn soilEnvironmentalOpen in IMG/M
3300000955Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300002070Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S4Host-AssociatedOpen in IMG/M
3300004114Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5EnvironmentalOpen in IMG/M
3300005543Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaGHost-AssociatedOpen in IMG/M
3300005562Agave microbial communities from Guanajuato, Mexico - As.Ma.eHost-AssociatedOpen in IMG/M
3300005564Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3 metaGHost-AssociatedOpen in IMG/M
3300005576Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157EnvironmentalOpen in IMG/M
3300005614Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2Host-AssociatedOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300005842Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S1-2Host-AssociatedOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006049Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. deltoides SBSDD1Host-AssociatedOpen in IMG/M
3300006163Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaGEnvironmentalOpen in IMG/M
3300006755Agricultural soil microbial communities from Georgia to study Nitrogen management - GA PlitterEnvironmentalOpen in IMG/M
3300006797Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108EnvironmentalOpen in IMG/M
3300006800Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109EnvironmentalOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006881Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009012Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159EnvironmentalOpen in IMG/M
3300009038Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaGEnvironmentalOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009098Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaGHost-AssociatedOpen in IMG/M
3300009101Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-4 metaGHost-AssociatedOpen in IMG/M
3300009174Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaGHost-AssociatedOpen in IMG/M
3300009177Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaGHost-AssociatedOpen in IMG/M
3300009553Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaGHost-AssociatedOpen in IMG/M
3300010040Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot55EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010077Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Wat_20_5_8_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010116Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_R_Met_20_2_24_1 metaT (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300010323Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010333Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_2_24_1 metaGEnvironmentalOpen in IMG/M
3300010364Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09212015EnvironmentalOpen in IMG/M
3300010371Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-1EnvironmentalOpen in IMG/M
3300010375Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaGHost-AssociatedOpen in IMG/M
3300010396Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-2EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012200Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_20_16 metaGEnvironmentalOpen in IMG/M
3300012353Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_L_80_16 metaGEnvironmentalOpen in IMG/M
3300012363Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h2.4A metaGEnvironmentalOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012489Unplanted soil (control) microbial communities from North Carolina - M.Soil.5.yng.040610EnvironmentalOpen in IMG/M
3300012513Arabidopsis rhizosphere microbial communities from North Carolina - M.Oy.2.old.250510Host-AssociatedOpen in IMG/M
3300012896Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S118-311C-2EnvironmentalOpen in IMG/M
3300012897Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S074-202C-1EnvironmentalOpen in IMG/M
3300012948Tropical forest soil microbial communities from Panama - MetaG Plot_14EnvironmentalOpen in IMG/M
3300012972Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_24_1 metaGEnvironmentalOpen in IMG/M
3300012976Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_40cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300012987Soil microbial communities amended with fresh organic matter from upstate New York, USA - Whitman soil sample_243_MGEnvironmentalOpen in IMG/M
3300013104Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C3-5 metaGHost-AssociatedOpen in IMG/M
3300013105Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - C2-5 metaGHost-AssociatedOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300015357Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaGEnvironmentalOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300017657Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015EnvironmentalOpen in IMG/M
3300018056Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM1_100_b1EnvironmentalOpen in IMG/M
3300018071Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_30_b1EnvironmentalOpen in IMG/M
3300018072Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b2EnvironmentalOpen in IMG/M
3300019361Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S133-311R-2 (version 2)EnvironmentalOpen in IMG/M
3300020081Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-3 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300022467Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5pm-2 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300023069Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S049-202B-5EnvironmentalOpen in IMG/M
3300023077Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, United States - UWRJ-S076-202R-6EnvironmentalOpen in IMG/M
3300025898Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025911Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025921Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025927Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025940Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025972Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300026023Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026078Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C6-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026295Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm (SPAdes)EnvironmentalOpen in IMG/M
3300027725Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 (SPAdes)EnvironmentalOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300027903Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_2 (SPAdes)EnvironmentalOpen in IMG/M
3300028379Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300028380Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300028573Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-20-23 metaGHost-AssociatedOpen in IMG/M
3300028707Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_148EnvironmentalOpen in IMG/M
3300028713Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_184EnvironmentalOpen in IMG/M
3300028717Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_158EnvironmentalOpen in IMG/M
3300028755Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_356EnvironmentalOpen in IMG/M
3300028768Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_119EnvironmentalOpen in IMG/M
3300028793Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_159EnvironmentalOpen in IMG/M
3300028802Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_SEnvironmentalOpen in IMG/M
3300028814Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_183EnvironmentalOpen in IMG/M
3300028884Soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_DNA_195EnvironmentalOpen in IMG/M
3300030902Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_356 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031096Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_194 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031712Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-CB3-27 metaGHost-AssociatedOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032782Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1EnvironmentalOpen in IMG/M
3300034090Peat soil microbial communities from Michigan Hollow, Ithaca, NY, United States - MHF00NEnvironmentalOpen in IMG/M
3300034659Metatranscriptome of lab incibated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - T60R1 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034666Metatranscriptome of lab incubated soil microbial communities from West Virginia University Organic Research Farm, Morgantown, WV, United States - C8R2 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300034820Populus rhizosphere microbial communities from soil in West Virginia, United States - WV94_WV_N_2Host-AssociatedOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
Bog_all_C_061751502140918008SoilMLLNLLASAASDSPITHAGKAIGLALGVGLGALGAG
JGI10214J12806_1066790823300000891SoilVSALLAATSGDVTKAGKAIGLALGVGLGALGAGVGIGN
JGI1027J12803_10898423523300000955SoilLVAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
JGI24750J21931_109174413300002070Corn, Switchgrass And Miscanthus RhizosphereVLATILAATSGDVTKAGKAVGLALGVGLGAAGAGVGI
Ga0062593_10161802223300004114SoilMLSALIAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0070672_10020863513300005543Miscanthus RhizosphereVLATILAATTGDVTKAGKAIGIALGVGLGSAGAGVGIGL
Ga0058697_1045846923300005562AgaveLSTLLAATSGDVTKAGKAIGLALGVGLGAAGAGVG
Ga0070664_10056213613300005564Corn RhizosphereMLSAFFVLAETTGDVADAGKAIALALGIGLGALGAG
Ga0066708_1103468823300005576SoilMYNLLFSAASNSPITHAGKAIGLALGVGLGALGAGV
Ga0068856_10008181213300005614Corn RhizosphereVLATILAQTSGDVTKAGKAIGIALGVGLGSAGAGVG
Ga0068852_10210087023300005616Corn RhizosphereLLATVIAATSGDVTKAGKAIGLALGVGLGALGAGVGIGN
Ga0066903_10502398413300005764Tropical Forest SoilMLSSFLVFAEAPVISAGKAIALALGIGLGAAGAGPGIGFIF
Ga0068858_10227586423300005842Switchgrass RhizosphereMLSALIAATTGDVTDAGKAIGLALGVGLGALGAGV
Ga0075365_1111396723300006038Populus EndosphereMLSSFFVLAETTGDVADAGKAIALALGIGLGALGAG
Ga0066652_10207169713300006046SoilMIGYILAATSGDVTKAGKAIGLALGVGLGAAGAGVGI
Ga0075417_1066588113300006049Populus RhizosphereVSALLAATSGDVTKAGKAIGLALGVGLGALGAGVG
Ga0070715_1032672823300006163Corn, Switchgrass And Miscanthus RhizosphereMLSALIAATTGDVTKAGKAIGLALGVGLGALGAGVG
Ga0079222_1156280213300006755Agricultural SoilMVGYILAATTGDVTKAGKAIGLALGVGLGALGAGVG
Ga0066659_1073587513300006797SoilMFNLLASAASNSPITHAGKAIGLALGVGLGALGAGVGI
Ga0066660_1115904513300006800SoilMVHLLFSATSDSPITHAGKAIGLALGVGLGALGAGIGIGNI
Ga0075434_10048236213300006871Populus RhizosphereMLHTVIAATSGDVTKAGKAIALALGIGLGSLGAGVGIG
Ga0068865_10071925113300006881Miscanthus RhizosphereMLSALIAATTGDVTKAGKAIALALGIGLGALGAGVGIG
Ga0075424_10005210673300006904Populus RhizosphereVIATVLAATTGDVTKAGKAIGLALGVGLGALGAGV
Ga0075424_10188470123300006904Populus RhizosphereMLATLIAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0066710_10204892223300009012Grasslands SoilVNALLAATSGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0099829_1147235413300009038Vadose Zone SoilVSTTLLAATSGDVEKAGKAIGLALGVGLGALGAGVGIGN
Ga0111539_1026967313300009094Populus RhizosphereMIGYILAATTGDVTKAGKAIGLALGVGLGAAGAGVGI
Ga0105245_1162223113300009098Miscanthus RhizosphereMSALSIVGAVDGNVADAGKAIALALGIGLGSLGAG
Ga0105247_1162118213300009101Switchgrass RhizosphereMLGTIIATTGDVTKAGKAIGLALGVGLGALGAGIGIGNI
Ga0105241_1165386623300009174Corn RhizosphereMNHMLAALIAATTGDVTKAGKAIGLALGVGLGALGAGVGIG
Ga0105248_1076450413300009177Switchgrass RhizosphereVLGTLIAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0105249_1160908313300009553Switchgrass RhizosphereMIGYILAATTGDVTKAGKAIGLALGVGLGAAGAGV
Ga0126308_1067811413300010040Serpentine SoilVLTNLIAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0126380_1064715013300010043Tropical Forest SoilMAVIQLLAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0127437_15522613300010077Grasslands SoilMHALLATTGDVTKAGKAIALALGIGLGSLGAGIGI
Ga0127466_110268913300010116Grasslands SoilMTMSTLLAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0134086_1033356413300010323Grasslands SoilVHTLLAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0134080_1049414713300010333Grasslands SoilMHSFLIAAVTGDATKAGKAVALALGIGLGALGAGVG
Ga0134066_1036851013300010364Grasslands SoilMSTLSLIAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0134125_1227768423300010371Terrestrial SoilMNHMLAALIAATTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0105239_1068722633300010375Corn RhizosphereMLSAFFVLAETTGDVADAGKAIALALGIGLGALGAGVG
Ga0134126_1018979763300010396Terrestrial SoilVLATVLAATSGDVTKAGKAIGLALGVGLGAAGAGVG
Ga0134126_1135735323300010396Terrestrial SoilMLSAFFVLAETTGDVADAGKAIALALGIGLGAAGAG
Ga0105246_1049889413300011119Miscanthus RhizosphereVLATILAATSGDVTRAGKAVGLALGVGLGAAGAGVGIGLIFS
Ga0137382_1133896213300012200Vadose Zone SoilVLATVLAATSGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0137367_1091165613300012353Vadose Zone SoilVVGTLVAATTGDVADAGKAIALALGIGLGALGAGV
Ga0137390_1128214813300012363Vadose Zone SoilMLQLLASAASNSPITHAGKAIGLALGVGLGALGAGVGI
Ga0150984_11413922043300012469Avena Fatua RhizosphereLLATVIAATTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0157349_103503223300012489Unplanted SoilMLSALIAATTGDVTKAGKAIGLAMGVGLGALGAGIG
Ga0157326_104668813300012513Arabidopsis RhizosphereVLATVIAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0157303_1006093823300012896SoilMIGYILAATTGDVTKAGKAIGLALGVGLGAAGAGVG
Ga0157285_1008892013300012897SoilVLATILAATSGDVTKAGKAIGLALGVGLGAAGAGV
Ga0126375_1113456213300012948Tropical Forest SoilMNTLSLLAATSGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0126375_1184988013300012948Tropical Forest SoilLLATLIAATSGDVTKAGKAIGIALGVGLGSLGAGVGI
Ga0134077_1017790413300012972Grasslands SoilMLATLIAATSGDVTKAGKAIGLALGVGLGALGAGVG
Ga0134076_1027286133300012976Grasslands SoilMLGYILAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNILAR*
Ga0164307_1060047523300012987SoilMAVIQLLAATTGDVTKAGKAIGLALGVGLGALGAGV
Ga0157370_1102105323300013104Corn RhizosphereVLATVLAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0157370_1161572323300013104Corn RhizosphereMLHTVIAAASGDVTKAGKAIALTPGIGLGWLGAAIGIGT
Ga0157369_1056463813300013105Corn RhizosphereMLHTVIAAASGDTVKAGKAIALALGIGLGSLGAGIGI
Ga0157369_1116839413300013105Corn RhizosphereMLATVIAATSGNVADAGKAIALALGIGLGSLGAGIG
Ga0157374_1007248413300013296Miscanthus RhizosphereMLGYILATTGDVTKAGKAVGLALGVGLGALGAGVGIGN
Ga0134072_1017353423300015357Grasslands SoilMSTLLAATTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0132255_10034826313300015374Arabidopsis RhizosphereMLSAFFVLAETTGDVADAGKAIALAMGIGLGALGA
Ga0134074_125717413300017657Grasslands SoilVLASVIAATSGDVTKAGKAVGLALGVGLGALGAGVGIG
Ga0184623_1037901723300018056Groundwater SedimentLLATLIAATSGDVTKAGKAIGLALGVGLGALGAGI
Ga0184618_1026373713300018071Groundwater SedimentMVHSLILAAAGDNVKAGKAIALALGIGLGSLGAGI
Ga0184635_1006468533300018072Groundwater SedimentVLATILAATSGDVTKAGKAIGLALGVGLGAAGAGVGIGLIFA
Ga0173482_1032908823300019361SoilVLGTVLAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0206354_1041809913300020081Corn, Switchgrass And Miscanthus RhizosphereMVGYILAQTTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0224712_1004810043300022467Corn, Switchgrass And Miscanthus RhizosphereMIGYILAATTGDVTKAGKAIGLALGVGLGAAGAGVGIGII
Ga0247751_104949613300023069SoilVIATMLAAVDGDVTKAGKAIGLALGVGLGALGAGV
Ga0247802_106428323300023077SoilMLGTIIAATSGDVTKAGKAIGLALGVGLGALGAGIGI
Ga0207692_1050944913300025898Corn, Switchgrass And Miscanthus RhizosphereMLGYILAATTGDVTKAGKAVGLALGVGLGALGAGVGI
Ga0207642_1046498723300025899Miscanthus RhizosphereMLGTILAATSGDVTKAGKAVGLALGVGLGALGAGVGIGNI
Ga0207699_1077219813300025906Corn, Switchgrass And Miscanthus RhizosphereVLATVLAATSGDVTKAGKAIGLALGVGLGAAGAGV
Ga0207654_1029648213300025911Corn RhizosphereVLGTVLAATSGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0207652_1092449223300025921Corn RhizosphereMPTLLAATADATVDAAKAIAFALGIGLGALGAGIG
Ga0207687_1190774613300025927Miscanthus RhizosphereVHTLLAATSGDVTKAGKAIGLALGVGLGALGAGVGIG
Ga0207665_1104857923300025939Corn, Switchgrass And Miscanthus RhizosphereMLATLIAATSGDVTKAGKAIGLALGVGLGALGAGV
Ga0207691_1039685413300025940Miscanthus RhizosphereVLATILAATTGDVTKAGKAIGIALGVGLGSAGAGVGIGLIFSSMIQ
Ga0207691_1056029733300025940Miscanthus RhizosphereMLAALLAATTGDVTKAGKAIGLALGVGLGALGAGVGIG
Ga0207668_1005775653300025972Switchgrass RhizosphereMLSSFFVLAETTGDVADAGKAIALALGIGLGALGAGV
Ga0207677_1084731323300026023Miscanthus RhizosphereMIGYILAATTGDVTKAGKAIGLALGVGLGAAGAGVGIGIIF
Ga0207702_1087449613300026078Corn RhizosphereMVGYILAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0209234_108709213300026295Grasslands SoilMSSLLVAATTGDVTKAGKAIGLALGVGLGALGAGV
Ga0209178_119512913300027725Agricultural SoilVLGTVLAATSGDVTKAGKAIGLALGVGLGALGAGVGIGN
Ga0209465_1036177713300027874Tropical Forest SoilMLATIIAATSGDVTKAGKAVGLALGVGLGALGAGVGIGN
Ga0209488_1118466623300027903Vadose Zone SoilMLAALLAATTGDVTKAGKAIGLAMGVGLGALGAGI
Ga0268266_1014522013300028379Switchgrass RhizosphereMVGYILAQTTGDVTKAGKAIGLALGVGLGALGAGVGIG
Ga0268265_1271562323300028380Switchgrass RhizosphereVVATILAAVDGDVTKAGKAIGLALGVGLGALGAGI
Ga0265334_1013694223300028573RhizosphereMHLILAATTGDVTKAGKAIGLALGVGLGAAGAGVGIG
Ga0307291_103263813300028707SoilVNTLLAATSGDVTKAGKAIGLALGVGLGALGAGIGI
Ga0307291_110178713300028707SoilVLGTVLAATTGDVTKAGKAIGLALGVGLGALGAGI
Ga0307303_1013392713300028713SoilVVATILAAVDGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0307298_1009163913300028717SoilMLSTLIAATSGDVTKAGKAIGLALGVGLGALGAGIG
Ga0307316_1019997113300028755SoilVLATVLAATTGDVTKAGKAIGLALGVGLGALGAGV
Ga0307316_1039002813300028755SoilVVATILAAVDGDVTKAGKAIGLALGVGLGALGAGV
Ga0307280_1022915813300028768SoilVLATILAATSGDVTKAGKAIGLALGVGLGAAGAGVGIGLIF
Ga0307299_1036057813300028793SoilMLATLIAATSGDVTKAGKAVGLALGVGLGARGAGVGIG
Ga0307503_1007466633300028802SoilMHSLLAATTGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0307302_1011192833300028814SoilVLATILAATSGDVTKAGKAIGLALGVGLGAAGAGVGIGLIFS
Ga0307308_1002333013300028884SoilVLATILAATSGDVTKAGKAIGLALGVGLGALGAGVGIGNI
Ga0308202_100582843300030902SoilVLATILAATSGDVTKAGKAIGLALGVGLGAAGAGVGI
Ga0308193_109455023300031096SoilMLGYILAATTGDVTKAGKAIGLALGVGLGALGAGVGIGN
Ga0307497_1050990723300031226SoilMLAALIAATTGDVTKAGKAIGLALGVGLGALGAGVGIGN
Ga0265342_1040520623300031712RhizosphereMHGIILAATTGDVTKAGKAIGLALGVGLGALGAGVG
Ga0335085_1232675823300032770SoilMSTLLAATTGDVTKAGKAIGLALGVGLGALGAGVG
Ga0335082_1071931413300032782SoilMFSLLLSAASNSPITHAGKAIGLALGVGLGALGAGV
Ga0326723_0190987_3_1133300034090Peat SoilVIAAVLAATTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0314780_194613_421_5253300034659SoilVLAAIAILAQVEGDVTKAGKAIGLALGVGLGATGA
Ga0314788_101264_3_1163300034666SoilMATLQLLFATTGDVTKAGKAIGLALGVGLGALGAGVGI
Ga0373959_0028684_1_1053300034820Rhizosphere SoilMLATVLAATSGDVTKAGKAIGLALGVGLGAAGAGV

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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