Basic Information | |
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Family ID | F083225 |
Family Type | Metagenome / Metatranscriptome |
Number of Sequences | 113 |
Average Sequence Length | 52 residues |
Representative Sequence | GPAKIVMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Number of Associated Samples | 105 |
Number of Associated Scaffolds | 113 |
Quality Assessment | |
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Transcriptomic Evidence | Yes |
Most common taxonomic group | Bacteria |
% of genes with valid RBS motifs | 0.88 % |
% of genes near scaffold ends (potentially truncated) | 99.12 % |
% of genes from short scaffolds (< 2000 bps) | 95.58 % |
Associated GOLD sequencing projects | 96 |
AlphaFold2 3D model prediction | Yes |
3D model pTM-score | 0.43 |
Hidden Markov Model |
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Most Common Taxonomy | |
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Group | Bacteria (100.000 % of family members) |
NCBI Taxonomy ID | 2 |
Taxonomy | All Organisms → cellular organisms → Bacteria |
Most Common Ecosystem | |
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GOLD Ecosystem | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil (7.965 % of family members) |
Environment Ontology (ENVO) | Unclassified (44.248 % of family members) |
Earth Microbiome Project Ontology (EMPO) | Free-living → Non-saline → Soil (non-saline) (43.363 % of family members) |
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Predicted Topology & Secondary Structure | |||||
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Classification: | Globular | Signal Peptide: | No | Secondary Structure distribution: | α-helix: 11.39% β-sheet: 26.58% Coil/Unstructured: 62.03% | Feature Viewer |
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Structure Viewer | |
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Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100 | pTM-score: 0.43 |
Powered by PDBe Molstar |
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Pfam ID | Name | % Frequency in 113 Family Scaffolds |
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PF01636 | APH | 5.31 |
PF13499 | EF-hand_7 | 2.65 |
PF13202 | EF-hand_5 | 1.77 |
PF05167 | DUF711 | 1.77 |
PF13649 | Methyltransf_25 | 0.88 |
PF13414 | TPR_11 | 0.88 |
PF00487 | FA_desaturase | 0.88 |
PF13557 | Phenol_MetA_deg | 0.88 |
PF13379 | NMT1_2 | 0.88 |
PF01584 | CheW | 0.88 |
PF00005 | ABC_tran | 0.88 |
COG ID | Name | Functional Category | % Frequency in 113 Family Scaffolds |
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COG2848 | Uncharacterized conserved protein, UPF0210 family | Cell cycle control, cell division, chromosome partitioning [D] | 1.77 |
COG1398 | Fatty-acid desaturase | Lipid transport and metabolism [I] | 0.88 |
COG3239 | Fatty acid desaturase | Lipid transport and metabolism [I] | 0.88 |
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Name | Rank | Taxonomy | Distribution |
All Organisms | root | All Organisms | 100.00 % |
Unclassified | root | N/A | 0.00 % |
Visualization |
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Scaffold | Taxonomy | Length | IMG/M Link |
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3300000364|INPhiseqgaiiFebDRAFT_101278594 | All Organisms → cellular organisms → Bacteria | 545 | Open in IMG/M |
3300000364|INPhiseqgaiiFebDRAFT_101382666 | All Organisms → cellular organisms → Bacteria | 1244 | Open in IMG/M |
3300000597|AF_2010_repII_A1DRAFT_10071686 | All Organisms → cellular organisms → Bacteria | 876 | Open in IMG/M |
3300000597|AF_2010_repII_A1DRAFT_10161177 | All Organisms → cellular organisms → Bacteria | 536 | Open in IMG/M |
3300001213|JGIcombinedJ13530_102521623 | All Organisms → cellular organisms → Bacteria | 702 | Open in IMG/M |
3300002077|JGI24744J21845_10031509 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1013 | Open in IMG/M |
3300004114|Ga0062593_102859064 | All Organisms → cellular organisms → Bacteria | 551 | Open in IMG/M |
3300004281|Ga0066397_10169870 | All Organisms → cellular organisms → Bacteria | 511 | Open in IMG/M |
3300004633|Ga0066395_10368549 | All Organisms → cellular organisms → Bacteria | 802 | Open in IMG/M |
3300005162|Ga0066814_10048569 | All Organisms → cellular organisms → Bacteria | 692 | Open in IMG/M |
3300005176|Ga0066679_10593683 | All Organisms → cellular organisms → Bacteria | 722 | Open in IMG/M |
3300005328|Ga0070676_10778068 | All Organisms → cellular organisms → Bacteria | 704 | Open in IMG/M |
3300005335|Ga0070666_10260041 | All Organisms → cellular organisms → Bacteria | 1230 | Open in IMG/M |
3300005343|Ga0070687_100357201 | All Organisms → cellular organisms → Bacteria | 945 | Open in IMG/M |
3300005356|Ga0070674_102174166 | All Organisms → cellular organisms → Bacteria | 506 | Open in IMG/M |
3300005446|Ga0066686_10407989 | All Organisms → cellular organisms → Bacteria | 928 | Open in IMG/M |
3300005454|Ga0066687_10635338 | All Organisms → cellular organisms → Bacteria | 634 | Open in IMG/M |
3300005456|Ga0070678_102108729 | All Organisms → cellular organisms → Bacteria | 534 | Open in IMG/M |
3300005457|Ga0070662_100269376 | All Organisms → cellular organisms → Bacteria | 1375 | Open in IMG/M |
3300005471|Ga0070698_100700491 | All Organisms → cellular organisms → Bacteria | 955 | Open in IMG/M |
3300005548|Ga0070665_100802755 | All Organisms → cellular organisms → Bacteria | 954 | Open in IMG/M |
3300005554|Ga0066661_10419301 | All Organisms → cellular organisms → Bacteria | 820 | Open in IMG/M |
3300005615|Ga0070702_100115212 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1674 | Open in IMG/M |
3300005617|Ga0068859_101047403 | All Organisms → cellular organisms → Bacteria | 897 | Open in IMG/M |
3300005618|Ga0068864_102322299 | All Organisms → cellular organisms → Bacteria | 543 | Open in IMG/M |
3300005764|Ga0066903_102437657 | All Organisms → cellular organisms → Bacteria | 1012 | Open in IMG/M |
3300005764|Ga0066903_104827071 | All Organisms → cellular organisms → Bacteria | 717 | Open in IMG/M |
3300005764|Ga0066903_105702236 | All Organisms → cellular organisms → Bacteria | 655 | Open in IMG/M |
3300005764|Ga0066903_109104552 | All Organisms → cellular organisms → Bacteria | 502 | Open in IMG/M |
3300005833|Ga0074472_10279109 | All Organisms → cellular organisms → Bacteria | 1011 | Open in IMG/M |
3300005841|Ga0068863_101999776 | All Organisms → cellular organisms → Bacteria | 590 | Open in IMG/M |
3300005843|Ga0068860_100367283 | All Organisms → cellular organisms → Bacteria | 1419 | Open in IMG/M |
3300005844|Ga0068862_100149888 | All Organisms → cellular organisms → Bacteria | 2075 | Open in IMG/M |
3300005937|Ga0081455_10967669 | All Organisms → cellular organisms → Bacteria | 527 | Open in IMG/M |
3300006050|Ga0075028_100194783 | All Organisms → cellular organisms → Bacteria | 1091 | Open in IMG/M |
3300006102|Ga0075015_100508825 | All Organisms → cellular organisms → Bacteria | 694 | Open in IMG/M |
3300006169|Ga0082029_1045084 | All Organisms → cellular organisms → Bacteria | 598 | Open in IMG/M |
3300006581|Ga0074048_12741277 | All Organisms → cellular organisms → Bacteria | 553 | Open in IMG/M |
3300006804|Ga0079221_10388818 | All Organisms → cellular organisms → Bacteria | 859 | Open in IMG/M |
3300006871|Ga0075434_101148772 | All Organisms → cellular organisms → Bacteria | 789 | Open in IMG/M |
3300006881|Ga0068865_101142016 | All Organisms → cellular organisms → Bacteria | 688 | Open in IMG/M |
3300006914|Ga0075436_100873073 | All Organisms → cellular organisms → Bacteria | 672 | Open in IMG/M |
3300009012|Ga0066710_101650780 | All Organisms → cellular organisms → Bacteria | 979 | Open in IMG/M |
3300009090|Ga0099827_11055710 | All Organisms → cellular organisms → Bacteria | 705 | Open in IMG/M |
3300009098|Ga0105245_10192294 | All Organisms → cellular organisms → Bacteria | 1955 | Open in IMG/M |
3300009176|Ga0105242_11746460 | All Organisms → cellular organisms → Bacteria | 659 | Open in IMG/M |
3300009177|Ga0105248_11002262 | All Organisms → cellular organisms → Bacteria | 943 | Open in IMG/M |
3300009545|Ga0105237_10597687 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1110 | Open in IMG/M |
3300009840|Ga0126313_11668439 | All Organisms → cellular organisms → Bacteria | 532 | Open in IMG/M |
3300010043|Ga0126380_10733361 | All Organisms → cellular organisms → Bacteria | 799 | Open in IMG/M |
3300010321|Ga0134067_10498908 | All Organisms → cellular organisms → Bacteria | 504 | Open in IMG/M |
3300010359|Ga0126376_12482607 | All Organisms → cellular organisms → Bacteria | 566 | Open in IMG/M |
3300010362|Ga0126377_12386557 | All Organisms → cellular organisms → Bacteria | 605 | Open in IMG/M |
3300010366|Ga0126379_11271269 | All Organisms → cellular organisms → Bacteria | 842 | Open in IMG/M |
3300010373|Ga0134128_11251498 | All Organisms → cellular organisms → Bacteria | 818 | Open in IMG/M |
3300010375|Ga0105239_11570478 | All Organisms → cellular organisms → Bacteria | 761 | Open in IMG/M |
3300010376|Ga0126381_100580759 | All Organisms → cellular organisms → Bacteria | 1592 | Open in IMG/M |
3300010376|Ga0126381_103512347 | All Organisms → cellular organisms → Bacteria | 615 | Open in IMG/M |
3300010379|Ga0136449_103476487 | All Organisms → cellular organisms → Bacteria | 601 | Open in IMG/M |
3300010398|Ga0126383_10200156 | All Organisms → cellular organisms → Bacteria | 1917 | Open in IMG/M |
3300010398|Ga0126383_10883994 | All Organisms → cellular organisms → Bacteria | 979 | Open in IMG/M |
3300010403|Ga0134123_12345995 | All Organisms → cellular organisms → Bacteria | 598 | Open in IMG/M |
3300012357|Ga0137384_11503847 | All Organisms → cellular organisms → Bacteria | 522 | Open in IMG/M |
3300012927|Ga0137416_11803236 | All Organisms → cellular organisms → Bacteria | 559 | Open in IMG/M |
3300012989|Ga0164305_11441705 | All Organisms → cellular organisms → Bacteria | 608 | Open in IMG/M |
3300013297|Ga0157378_11408099 | All Organisms → cellular organisms → Bacteria | 740 | Open in IMG/M |
3300014968|Ga0157379_10638098 | All Organisms → cellular organisms → Bacteria | 996 | Open in IMG/M |
3300015264|Ga0137403_10408386 | All Organisms → cellular organisms → Bacteria | 1237 | Open in IMG/M |
3300015371|Ga0132258_13805378 | All Organisms → cellular organisms → Bacteria | 1028 | Open in IMG/M |
3300016319|Ga0182033_11243891 | All Organisms → cellular organisms → Bacteria | 668 | Open in IMG/M |
3300016341|Ga0182035_11484307 | All Organisms → cellular organisms → Bacteria | 610 | Open in IMG/M |
3300016422|Ga0182039_12056168 | All Organisms → cellular organisms → Bacteria | 526 | Open in IMG/M |
3300018066|Ga0184617_1220153 | All Organisms → cellular organisms → Bacteria | 567 | Open in IMG/M |
3300018081|Ga0184625_10105081 | All Organisms → cellular organisms → Bacteria | 1460 | Open in IMG/M |
3300018433|Ga0066667_10368721 | All Organisms → cellular organisms → Bacteria | 1149 | Open in IMG/M |
3300019208|Ga0180110_1119401 | All Organisms → cellular organisms → Bacteria | 528 | Open in IMG/M |
3300019257|Ga0180115_1309530 | All Organisms → cellular organisms → Bacteria | 552 | Open in IMG/M |
3300019362|Ga0173479_10601147 | All Organisms → cellular organisms → Bacteria | 575 | Open in IMG/M |
3300019888|Ga0193751_1148363 | All Organisms → cellular organisms → Bacteria | 844 | Open in IMG/M |
3300021168|Ga0210406_11236271 | All Organisms → cellular organisms → Bacteria | 541 | Open in IMG/M |
3300021560|Ga0126371_10846166 | All Organisms → cellular organisms → Bacteria | 1060 | Open in IMG/M |
3300025315|Ga0207697_10161136 | All Organisms → cellular organisms → Bacteria | 978 | Open in IMG/M |
3300025903|Ga0207680_10229450 | All Organisms → cellular organisms → Bacteria | 1276 | Open in IMG/M |
3300025911|Ga0207654_11303268 | All Organisms → cellular organisms → Bacteria | 529 | Open in IMG/M |
3300025933|Ga0207706_10178628 | All Organisms → cellular organisms → Bacteria | 1864 | Open in IMG/M |
3300025937|Ga0207669_10346027 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1146 | Open in IMG/M |
3300025938|Ga0207704_10247617 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1336 | Open in IMG/M |
3300025938|Ga0207704_11294125 | All Organisms → cellular organisms → Bacteria | 623 | Open in IMG/M |
3300025960|Ga0207651_10214798 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1551 | Open in IMG/M |
3300025961|Ga0207712_10203392 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1572 | Open in IMG/M |
3300025972|Ga0207668_12134457 | All Organisms → cellular organisms → Bacteria | 504 | Open in IMG/M |
3300026023|Ga0207677_12139438 | All Organisms → cellular organisms → Bacteria | 520 | Open in IMG/M |
3300026067|Ga0207678_10032013 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium | 4584 | Open in IMG/M |
3300026088|Ga0207641_10640642 | All Organisms → cellular organisms → Bacteria | 1043 | Open in IMG/M |
3300026121|Ga0207683_11654796 | All Organisms → cellular organisms → Bacteria | 589 | Open in IMG/M |
3300027654|Ga0209799_1082324 | All Organisms → cellular organisms → Bacteria | 727 | Open in IMG/M |
3300028379|Ga0268266_10039471 | All Organisms → cellular organisms → Bacteria → Proteobacteria | 4022 | Open in IMG/M |
3300028380|Ga0268265_11228080 | All Organisms → cellular organisms → Bacteria → Terrabacteria group → Cyanobacteria/Melainabacteria group → Candidatus Melainabacteria → unclassified Candidatus Melainabacteria → Candidatus Melainabacteria bacterium | 748 | Open in IMG/M |
3300028802|Ga0307503_10122960 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1140 | Open in IMG/M |
3300030006|Ga0299907_11212858 | All Organisms → cellular organisms → Bacteria | 541 | Open in IMG/M |
3300030294|Ga0311349_10150917 | All Organisms → cellular organisms → Bacteria | 2181 | Open in IMG/M |
3300031184|Ga0307499_10300422 | All Organisms → cellular organisms → Bacteria | 529 | Open in IMG/M |
3300031455|Ga0307505_10282694 | All Organisms → cellular organisms → Bacteria | 776 | Open in IMG/M |
3300031719|Ga0306917_11534764 | All Organisms → cellular organisms → Bacteria | 512 | Open in IMG/M |
3300031740|Ga0307468_100292655 | All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria | 1176 | Open in IMG/M |
3300031879|Ga0306919_10802080 | All Organisms → cellular organisms → Bacteria | 724 | Open in IMG/M |
3300031912|Ga0306921_11919091 | All Organisms → cellular organisms → Bacteria | 633 | Open in IMG/M |
3300031946|Ga0310910_10954507 | All Organisms → cellular organisms → Bacteria | 671 | Open in IMG/M |
3300031947|Ga0310909_11261302 | All Organisms → cellular organisms → Bacteria | 596 | Open in IMG/M |
3300032160|Ga0311301_12978141 | All Organisms → cellular organisms → Bacteria | 510 | Open in IMG/M |
3300032174|Ga0307470_11930786 | All Organisms → cellular organisms → Bacteria | 503 | Open in IMG/M |
3300032205|Ga0307472_100455272 | All Organisms → cellular organisms → Bacteria | 1089 | Open in IMG/M |
3300032892|Ga0335081_10032059 | All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Bryobacterales → Solibacteraceae → Candidatus Solibacter → Candidatus Solibacter usitatus | 8442 | Open in IMG/M |
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Habitat | Taxonomy | Distribution |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil | 7.96% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 6.19% |
Tropical Forest Soil | Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil | 6.19% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Switchgrass Rhizosphere | 6.19% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil | 5.31% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 5.31% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Switchgrass Rhizosphere | 5.31% |
Vadose Zone Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil | 3.54% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere | 3.54% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil | 2.65% |
Hardwood Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil | 2.65% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Corn Rhizosphere | 2.65% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Miscanthus Rhizosphere | 2.65% |
Corn Rhizosphere | Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Corn Rhizosphere | 2.65% |
Groundwater Sediment | Environmental → Aquatic → Freshwater → Sediment → Unclassified → Groundwater Sediment | 1.77% |
Groundwater Sediment | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Groundwater Sediment | 1.77% |
Watersheds | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds | 1.77% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil | 1.77% |
Terrestrial Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil | 1.77% |
Peatlands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil | 1.77% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil | 1.77% |
Forest Soil | Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil | 1.77% |
Corn, Switchgrass And Miscanthus Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere | 1.77% |
Corn, Switchgrass And Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere | 1.77% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizoplane → Soil → Unclassified → Miscanthus Rhizosphere | 1.77% |
Populus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere | 1.77% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 1.77% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 1.77% |
Wetland | Environmental → Aquatic → Marine → Wetlands → Sediment → Wetland | 0.89% |
Sediment (Intertidal) | Environmental → Aquatic → Sediment → Unclassified → Unclassified → Sediment (Intertidal) | 0.89% |
Serpentine Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Serpentine Soil | 0.89% |
Grasslands Soil | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil | 0.89% |
Termite Nest | Environmental → Terrestrial → Soil → Unclassified → Unclassified → Termite Nest | 0.89% |
Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Soil | 0.89% |
Agricultural Soil | Environmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil | 0.89% |
Soil | Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil | 0.89% |
Switchgrass Rhizosphere | Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Switchgrass Rhizosphere | 0.89% |
Fen | Environmental → Terrestrial → Peat → Unclassified → Unclassified → Fen | 0.89% |
Arabidopsis Rhizosphere | Host-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere | 0.89% |
Tabebuia Heterophylla Rhizosphere | Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Tabebuia Heterophylla Rhizosphere | 0.89% |
Miscanthus Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere | 0.89% |
Switchgrass Rhizosphere | Host-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Switchgrass Rhizosphere | 0.89% |
Visualization |
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Taxon OID | Sample Name | Habitat Type | IMG/M Link |
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3300000364 | Soil microbial communities from Great Prairies - Iowa, Native Prairie soil | Environmental | Open in IMG/M |
3300000597 | Forest soil microbial communities from Amazon forest - 2010 replicate II A1 | Environmental | Open in IMG/M |
3300001213 | Combined assembly of wetland microbial communities from Twitchell Island in the Sacramento Delta (Jan 2013 JGI Velvet Assembly) | Environmental | Open in IMG/M |
3300002077 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M3 | Host-Associated | Open in IMG/M |
3300004114 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling - Combined assembly of AARS Block 5 | Environmental | Open in IMG/M |
3300004281 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 30 MoBio | Environmental | Open in IMG/M |
3300004633 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio | Environmental | Open in IMG/M |
3300005162 | Soil and rhizosphere microbial communities from Laval, Canada - mgLAB | Environmental | Open in IMG/M |
3300005176 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_128 | Environmental | Open in IMG/M |
3300005328 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-3 metaG | Host-Associated | Open in IMG/M |
3300005335 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG | Host-Associated | Open in IMG/M |
3300005343 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-3L metaG | Environmental | Open in IMG/M |
3300005356 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG | Host-Associated | Open in IMG/M |
3300005446 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135 | Environmental | Open in IMG/M |
3300005454 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_136 | Environmental | Open in IMG/M |
3300005456 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG | Host-Associated | Open in IMG/M |
3300005457 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG | Host-Associated | Open in IMG/M |
3300005471 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-2 metaG | Environmental | Open in IMG/M |
3300005548 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG | Host-Associated | Open in IMG/M |
3300005554 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 | Environmental | Open in IMG/M |
3300005615 | Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaG | Environmental | Open in IMG/M |
3300005617 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S2-2 | Host-Associated | Open in IMG/M |
3300005618 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S7-2 | Host-Associated | Open in IMG/M |
3300005764 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2) | Environmental | Open in IMG/M |
3300005833 | Microbial communities from Cathlamet Bay sediment, Columbia River estuary, Oregon - S.174_CBK | Environmental | Open in IMG/M |
3300005841 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 | Host-Associated | Open in IMG/M |
3300005843 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S3-2 | Host-Associated | Open in IMG/M |
3300005844 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 | Host-Associated | Open in IMG/M |
3300005937 | Tabebuia heterophylla rhizosphere microbial communities from the University of Puerto Rico - S3T2R1 | Host-Associated | Open in IMG/M |
3300006050 | Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014 | Environmental | Open in IMG/M |
3300006102 | Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013 | Environmental | Open in IMG/M |
3300006169 | Termite nest microbial communities from Madurai, India | Environmental | Open in IMG/M |
3300006581 | Soil and rhizosphere microbial communities from Centre INRS-Institut Armand-Frappier, Laval, Canada - Soil microcosm metaTmtLPB (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300006804 | Agricultural soil microbial communities from Georgia to study Nitrogen management - GA AS200 | Environmental | Open in IMG/M |
3300006871 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3 | Host-Associated | Open in IMG/M |
3300006881 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 | Host-Associated | Open in IMG/M |
3300006914 | Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD5 | Host-Associated | Open in IMG/M |
3300009012 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159 | Environmental | Open in IMG/M |
3300009090 | Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG | Environmental | Open in IMG/M |
3300009098 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M5-4 metaG | Host-Associated | Open in IMG/M |
3300009176 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG | Host-Associated | Open in IMG/M |
3300009177 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S3-4 metaG | Host-Associated | Open in IMG/M |
3300009545 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C2-4 metaG | Host-Associated | Open in IMG/M |
3300009840 | Serpentine soil microbial communities from UC McLaughlin Reserve, CA, USA - Plot105A | Environmental | Open in IMG/M |
3300010043 | Tropical forest soil microbial communities from Panama - MetaG Plot_26 | Environmental | Open in IMG/M |
3300010321 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09212015 | Environmental | Open in IMG/M |
3300010359 | Tropical forest soil microbial communities from Panama - MetaG Plot_15 | Environmental | Open in IMG/M |
3300010362 | Tropical forest soil microbial communities from Panama - MetaG Plot_22 | Environmental | Open in IMG/M |
3300010366 | Tropical forest soil microbial communities from Panama - MetaG Plot_24 | Environmental | Open in IMG/M |
3300010373 | Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4 | Environmental | Open in IMG/M |
3300010375 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C4-4 metaG | Host-Associated | Open in IMG/M |
3300010376 | Tropical forest soil microbial communities from Panama - MetaG Plot_28 | Environmental | Open in IMG/M |
3300010379 | Sb_50d combined assembly | Environmental | Open in IMG/M |
3300010398 | Tropical forest soil microbial communities from Panama - MetaG Plot_35 | Environmental | Open in IMG/M |
3300010403 | Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3 | Environmental | Open in IMG/M |
3300012357 | Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_60_16 metaG | Environmental | Open in IMG/M |
3300012927 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly) | Environmental | Open in IMG/M |
3300012989 | Soil microbial communities amended with pyrogenic organic matter from upstate New York, USA - Whitman soil sample_237_MG | Environmental | Open in IMG/M |
3300013297 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M6-5 metaG | Host-Associated | Open in IMG/M |
3300014968 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - S2-5 metaG | Host-Associated | Open in IMG/M |
3300015264 | Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_1_16fungal (Hybrid Assembly) | Environmental | Open in IMG/M |
3300015371 | Combined assembly of cpr5 and col0 rhizosphere and soil | Host-Associated | Open in IMG/M |
3300016319 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H | Environmental | Open in IMG/M |
3300016341 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 | Environmental | Open in IMG/M |
3300016422 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 | Environmental | Open in IMG/M |
3300018066 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM0_5_b1 | Environmental | Open in IMG/M |
3300018081 | Groundwater sediment microbial communities from an aquifer in East River, Colorado, USA - PLM3_30_b1 | Environmental | Open in IMG/M |
3300018433 | Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116 | Environmental | Open in IMG/M |
3300019208 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT231_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019257 | Metatranscriptome of soil microbial communities from meander-bound floodplain in the East River, Colorado, USA - East River metaT ERMLT660_16_1Ra (Metagenome Metatranscriptome) | Environmental | Open in IMG/M |
3300019362 | Soil microbial communities from Arlington Agricultural Research Station in Wisconsin, USA - Nitrogen cycling UWRJ-S104-311B-1 (version 2) | Environmental | Open in IMG/M |
3300019888 | Soil microbial communities from a riparian zone of the East river system, Colorado, United States ? L1c2 | Environmental | Open in IMG/M |
3300021168 | Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-30-M | Environmental | Open in IMG/M |
3300021560 | Tropical forest soil microbial communities from Panama - MetaG Plot_4 | Environmental | Open in IMG/M |
3300025315 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA, with PhiX - S5 (SPAdes) | Host-Associated | Open in IMG/M |
3300025903 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025911 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025933 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C5-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025937 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M3-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025938 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M1-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300025960 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025961 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-4 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300025972 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S4-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026023 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M4-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026067 | Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C6-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300026088 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S6-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300026121 | Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M7-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300027654 | Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 MoBio (SPAdes) | Environmental | Open in IMG/M |
3300028379 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS S1-3 metaG (SPAdes) | Host-Associated | Open in IMG/M |
3300028380 | Switchgrass rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Switchgrass S5-2 (SPAdes) | Host-Associated | Open in IMG/M |
3300028802 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 17_S | Environmental | Open in IMG/M |
3300030006 | Soil microbial communities from uranium-contaminated site in the Upper Colorado River Basin, Wyoming, United States - RVT152D67 | Environmental | Open in IMG/M |
3300030294 | II_Fen_E3 coassembly | Environmental | Open in IMG/M |
3300031184 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 13_S | Environmental | Open in IMG/M |
3300031455 | Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 23_S | Environmental | Open in IMG/M |
3300031719 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000 (v2) | Environmental | Open in IMG/M |
3300031740 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05 | Environmental | Open in IMG/M |
3300031879 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2) | Environmental | Open in IMG/M |
3300031912 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2) | Environmental | Open in IMG/M |
3300031946 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF172 | Environmental | Open in IMG/M |
3300031947 | Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000H | Environmental | Open in IMG/M |
3300032160 | Sb_50d combined assembly (MetaSPAdes) | Environmental | Open in IMG/M |
3300032174 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05 | Environmental | Open in IMG/M |
3300032205 | Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05 | Environmental | Open in IMG/M |
3300032892 | Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.5 | Environmental | Open in IMG/M |
Geographical Distribution | |
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Protein ID | Sample Taxon ID | Habitat | Sequence |
INPhiseqgaiiFebDRAFT_1012785941 | 3300000364 | Soil | HRLLYPDPPPFGPAKIVMQTLRLPVELLVEAGVDPSDLRSIALVFDRRATGTVYVGDLQCSN* |
INPhiseqgaiiFebDRAFT_1013826661 | 3300000364 | Soil | LPIHRLVELGVDPSDLRTVALVFDRRAKGTLYVGDLQLSN* |
AF_2010_repII_A1DRAFT_100716861 | 3300000597 | Forest Soil | YPDAPPFGPAKIVMQTLRLPVERLVECGVDPFDLRSIALVFDRRATGTVYAGDLQCSN* |
AF_2010_repII_A1DRAFT_101611772 | 3300000597 | Forest Soil | QTLRLPVERLVECGVDPTDLRSIAFVFDRRATGTLYVGDLQCSN* |
JGIcombinedJ13530_1025216231 | 3300001213 | Wetland | LPLERLVECGVDPTDLRSIALVFDRRPTGTVYIGDLQVSN* |
JGI24744J21845_100315091 | 3300002077 | Corn, Switchgrass And Miscanthus Rhizosphere | LPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0062593_1028590641 | 3300004114 | Soil | AIPAGAIHRLIYPDPPPFGPSKIIMQSLRVPVEQLVDCGVDPSDLRSIALVVDKRSTGVVYVGDVQFSN* |
Ga0066397_101698701 | 3300004281 | Tropical Forest Soil | TLRLPVERLVESGVDPIDLRSIALVFDRRATGTVYVGDLQCSN* |
Ga0066395_103685491 | 3300004633 | Tropical Forest Soil | ASSLHRLLYPDTGGFSGGKIVMQSLRLAVERLVEAGVDPFDLRSIALVFDKRASGVVYLGDLQVSE* |
Ga0066814_100485692 | 3300005162 | Soil | LHRLLFPDSPPFGPAKIVLQTLRLPAARLVERGVDPSDLRSITLIFDRRQTGVVYTGDLQLTN* |
Ga0066679_105936832 | 3300005176 | Soil | PVARLVECGVDPSDLRSIALVFDRRQTGVVYTGDLQFTN* |
Ga0070676_107780681 | 3300005328 | Miscanthus Rhizosphere | VMQTLRLPVARLVECGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0070666_102600411 | 3300005335 | Switchgrass Rhizosphere | PAKIVMQTLRLPVERLVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN* |
Ga0070687_1003572013 | 3300005343 | Switchgrass Rhizosphere | SSLHRLLFPDPPPFGPAKIVMQTLRLPVARLVEWGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0070674_1021741662 | 3300005356 | Miscanthus Rhizosphere | VMQTLRLPVARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN* |
Ga0066686_104079892 | 3300005446 | Soil | LPVERFVECGVDPTDLRSIALVFDRRTTGTVYVGDLQFSN* |
Ga0066687_106353381 | 3300005454 | Soil | PIFGPAKIMMQTLRLPVAQLVECGVEPRDIRSIAFFFDRRAAGTLYVGDLQFSN* |
Ga0070678_1021087291 | 3300005456 | Miscanthus Rhizosphere | TLRLPVARLLERGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN* |
Ga0070662_1002693761 | 3300005457 | Corn Rhizosphere | RLLFPDPPPFGPAKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN* |
Ga0070698_1007004911 | 3300005471 | Corn, Switchgrass And Miscanthus Rhizosphere | LLFPDPPPFGPAKIVMQTLRLPVARLVECGVDPSDLRSIALVFDRRQTGVVYTGDLQFTN |
Ga0070665_1008027551 | 3300005548 | Switchgrass Rhizosphere | SALHRLIYPDLPPFGPAKIVMQTLRLPVERLVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN* |
Ga0066661_104193013 | 3300005554 | Soil | LVEAGVEPRDIRSIAFFFDRRATGTVYVGDLSFSN* |
Ga0070702_1001152123 | 3300005615 | Corn, Switchgrass And Miscanthus Rhizosphere | FPDPPPFGPAKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0068859_1010474033 | 3300005617 | Switchgrass Rhizosphere | PPFGPAKIVMQTLRLPVARLVECGVDPSDLRVVALVFDRRLTGVVYTGDLQFTN* |
Ga0068864_1023222991 | 3300005618 | Switchgrass Rhizosphere | FAASALHRLIYPDLPPFGPAKIVMQTLRLPVERLVERGVDPADLRSVALVFDRRAAGTIYVGDLQCSN* |
Ga0066903_1024376573 | 3300005764 | Tropical Forest Soil | GGKIVMQSLRLAVERLVEAGVDPFDLRSIALVFDKRASGVVYLGDLQVSE* |
Ga0066903_1048270712 | 3300005764 | Tropical Forest Soil | ASSLHRLLFPDPPPFGPAKIVMQTLRLPVGRLVDCRVDPSDLRSIALVFDRRQTGVIYIGDLQFTN* |
Ga0066903_1057022361 | 3300005764 | Tropical Forest Soil | SLHRLLYPDAPPFGPAKIVMQTLRLPVERLVDSGVEPSDLRSIALVFDRRATGTVYVGDLQCSN* |
Ga0066903_1091045521 | 3300005764 | Tropical Forest Soil | MMQTLRLPVDRLVEQGVDPTDLRSIAFVFDRRATGTVYVGDLQFSN* |
Ga0074472_102791093 | 3300005833 | Sediment (Intertidal) | AQLVELGVDPSDLRSIALVFDRRATGTVYVGDLQFSN* |
Ga0068863_1019997762 | 3300005841 | Switchgrass Rhizosphere | LYPDAPPIGPAKIVMQSLRVPVARLVENGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN* |
Ga0068860_1003672834 | 3300005843 | Switchgrass Rhizosphere | GPAKIVMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0068862_1001498881 | 3300005844 | Switchgrass Rhizosphere | PDPPPFGPAKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRLTGVVYTGDLQFTN* |
Ga0081455_109676691 | 3300005937 | Tabebuia Heterophylla Rhizosphere | AKIVMQTLHLPVARLVERGVDPSDLRSIALVFDRRATGVIYVGDLQFSN* |
Ga0075028_1001947831 | 3300006050 | Watersheds | LLYPDVVFGAGKIVMQTLRLPVQRLVDCDVDPSDLRSITLVFDRRSTGVVYVGDLQVSN* |
Ga0075015_1005088251 | 3300006102 | Watersheds | LRLPVARLVECGVDPSDLRSIALVFDRRQTGVVYTGDLQFTN* |
Ga0082029_10450842 | 3300006169 | Termite Nest | GPTFGAKIMMQTLRLPTERLLECGVDPIDLRSIALVFDRRSTGVLYVGDLQFSN* |
Ga0074048_127412771 | 3300006581 | Soil | LLYPDPPIGPAKIVMQSLRLPVARLLECGVDPSDLRSIALVFDQRPAGVVYAGDLQFSN* |
Ga0079221_103888181 | 3300006804 | Agricultural Soil | RLPVARLLECGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN* |
Ga0075434_1011487721 | 3300006871 | Populus Rhizosphere | GSSKIVMQTLRLPVERLVESGVDPIDLRSIALVFDRRATGAIYVGDLQFSN* |
Ga0068865_1011420161 | 3300006881 | Miscanthus Rhizosphere | PPFGPAKIVMQTLRLPVARLFECGVDPSDLRAIALVFDRRLTGVVYTGDLQFTN* |
Ga0075436_1008730731 | 3300006914 | Populus Rhizosphere | PFGPAKIMMQTLRLPVERLVECGVDPTDLRSIALVFDRRATGTVYVGDLQCSN* |
Ga0066710_1016507803 | 3300009012 | Grasslands Soil | PVERLVECGVDPIDLRSIALVFDRRATGAIYVGDLQFSN |
Ga0099827_110557101 | 3300009090 | Vadose Zone Soil | SCLHRLLYPDPPPFGPAKIVMQTLRLPIERLVECGVDPTDLRSIALVFDRRATGTLYVGDLQWSN* |
Ga0105245_101922941 | 3300009098 | Miscanthus Rhizosphere | AKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN* |
Ga0105242_117464601 | 3300009176 | Miscanthus Rhizosphere | IVMQTLRLPVARLVERGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN* |
Ga0105248_110022623 | 3300009177 | Switchgrass Rhizosphere | FGPAKIVMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0105237_105976873 | 3300009545 | Corn Rhizosphere | VMQTLRLPVARLVERGVDPSDLRAMALVFDRRQTGVVYAGDLQFTN* |
Ga0126313_116684392 | 3300009840 | Serpentine Soil | PDAPPFGPAKIVMQSLRLPVARLLECGVDPSDLRSIALVFDHRPAGVVYAGDLQFSN* |
Ga0126380_107333611 | 3300010043 | Tropical Forest Soil | IPVSSLHRLLYPDPPPFGPAKIVMQTLRLSVERLIECGVDPTDLRSIALVFDRRATGTVYVGDLQCSN* |
Ga0134067_104989082 | 3300010321 | Grasslands Soil | VECGVDPTDLRSIALVFDRRTTGTVYVGDLQFSN* |
Ga0126376_124826071 | 3300010359 | Tropical Forest Soil | PAKIVMQTLRLPVERLVECGVDPTDLRSIALVFDRRTTGTVYVGDLQFSN* |
Ga0126377_123865571 | 3300010362 | Tropical Forest Soil | LLYPDAPPFGPAKIVMQTLRLPVARLLNHGVDPSDLRSMALVFDRRPAGVVYVGDLQFSN |
Ga0126379_112712691 | 3300010366 | Tropical Forest Soil | FPASSLHRLLFPDPPPFGPAKIVMQTLRLPVGRLVECRVDPSDLRSIALVFDRRQTGVIYIGDLQFTN* |
Ga0134128_112514982 | 3300010373 | Terrestrial Soil | LFPDAPPFGPAKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN* |
Ga0105239_115704783 | 3300010375 | Corn Rhizosphere | VMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0126381_1005807591 | 3300010376 | Tropical Forest Soil | IPASSLHRLLYPDPPPFGPAKIMMQTLRLPVERLVECGVDPTDLRSIAFVFDRRATGTLYVGDLQCSN* |
Ga0126381_1035123472 | 3300010376 | Tropical Forest Soil | GKIVMQTLRIPMDRLREHGVEPSDLRSIALVFDRRPTGTVYVGDIQLCH* |
Ga0136449_1034764872 | 3300010379 | Peatlands Soil | RLPLKWLEERGVQLDDLRSIALVFDRRPTGIIYVGDVQVSD* |
Ga0126383_102001561 | 3300010398 | Tropical Forest Soil | IVMQTLRLPIHRLAELGVDPSDLRTVALLFDRRAKGTVYVGDLQLSN* |
Ga0126383_108839943 | 3300010398 | Tropical Forest Soil | VGRLVDCRVDPSDLRSIALVFDRRQTGVIYIGDLQFTN* |
Ga0134123_123459951 | 3300010403 | Terrestrial Soil | DLPPFGPAKIVMQTLRLPVERLVERGVDPADLRSIALVFDRRAAGTIYVGDLQCSN* |
Ga0137384_115038472 | 3300012357 | Vadose Zone Soil | FGPAKIVMQTLRLPVARLGECGVDPSDLRSIALVFDRRATGTVYVGDLQFSN* |
Ga0137416_118032361 | 3300012927 | Vadose Zone Soil | PAKIVMQTLRLPVARLVECGVDPSDLRSIALIFYRRATGTVYVGDLQFSN* |
Ga0164305_114417052 | 3300012989 | Soil | LPVARLVECGVDPSDLRSIALVFDRRQTGVVYTGDLQFTD* |
Ga0157378_114080992 | 3300013297 | Miscanthus Rhizosphere | MQTLRLPVARLVEWGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN* |
Ga0157379_106380981 | 3300014968 | Switchgrass Rhizosphere | GPAKIVMQTLRLPVARLLERGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN* |
Ga0137403_104083861 | 3300015264 | Vadose Zone Soil | SLHRLLYPDPPPFGPAKIMMQTLRLPVERLVECGVDPTDLRSIALVFDRRATGTVYVGDLQCSN* |
Ga0132258_138053781 | 3300015371 | Arabidopsis Rhizosphere | AASSLHRLLFPDPPPFGPAKIVMQTLRLPVARLVECRVDPSDLRSIALVFDRRPTGVVYVGDLQFTN* |
Ga0182033_112438911 | 3300016319 | Soil | SSLHRLLYPDTGGFGGGKVVMQSLRLAVERLVEAGVDPFDLRSIALVFDKRASGVVYLGDLQVSE |
Ga0182035_114843072 | 3300016341 | Soil | VFGAGKTVMQTLRLSLDRLRALGVDPADLRSIALEFDRRPTGTLYLGEIQVTD |
Ga0182039_120561682 | 3300016422 | Soil | LHRLLFPDPPPFGPAKIVMQSLRLPVARLIECGVDPDDLRSIALVFDRRQTGVVYTGDLQFTH |
Ga0184617_12201532 | 3300018066 | Groundwater Sediment | PAKIVMQTLRLPVERLVDRGVDPADLRSIALVFDRRAAGTIYVGDLQCSN |
Ga0184625_101050814 | 3300018081 | Groundwater Sediment | LPVERLVDRGVDPADLRSIALVFDRRAAGTIYVGDLQCSN |
Ga0066667_103687211 | 3300018433 | Grasslands Soil | HAPPPVGPEKIVMQTLRLPVERLVECGVDPTDLRSIALVFDRRTTGTVYVGDLQFSN |
Ga0180110_11194012 | 3300019208 | Groundwater Sediment | LVECGVDPSDLRSIALVFDRRQTGVVYTGDLQSTN |
Ga0180115_13095302 | 3300019257 | Groundwater Sediment | PPFGPAKIVMQTLRLPVARLVECGVDPSDLRSIALVFDRRQTGVVYTGDLQSTN |
Ga0173479_106011472 | 3300019362 | Soil | PVEQLVDCGVDPSDLRSIALVVDKRSTGVVYVGDVQFSN |
Ga0193751_11483631 | 3300019888 | Soil | AAIPASSLHRLLYPDVVFGAGKIVMQTLRLPMQRLVELGVDPSDLRSIALVFDRRATGAVYAGDLQVSN |
Ga0210406_112362711 | 3300021168 | Soil | PFGPAKIVMQTLRLPVARLVECDVNPSDLRSIALIFDRRQTGVVYTGDLQFTS |
Ga0126371_108461661 | 3300021560 | Tropical Forest Soil | AFPASSLHRLLFPDQPPFGPAKIVMQSMRLPVARLIECGVDPDDLRSIALVFDRRQTGVVYMGDLQFTH |
Ga0207697_101611363 | 3300025315 | Corn, Switchgrass And Miscanthus Rhizosphere | LVERGVDPSDLRAIALVFDRRQTGVVYTGDLQFTN |
Ga0207680_102294504 | 3300025903 | Switchgrass Rhizosphere | ELPPFGPAKIVMQTLRLPVERLVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN |
Ga0207654_113032682 | 3300025911 | Corn Rhizosphere | VMQTLRLPVARLLERGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN |
Ga0207706_101786284 | 3300025933 | Corn Rhizosphere | ARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN |
Ga0207669_103460273 | 3300025937 | Miscanthus Rhizosphere | FGPAKIVMQTLRLPVARLVEWGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0207704_102476171 | 3300025938 | Miscanthus Rhizosphere | TLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0207704_112941251 | 3300025938 | Miscanthus Rhizosphere | SLHRLLFPDPPPFGPAKIVMQTLRLPVARLFECGVDPSDLRAIALVFDRRLTGVVYTGDLQFTN |
Ga0207651_102147981 | 3300025960 | Switchgrass Rhizosphere | RLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0207712_102033923 | 3300025961 | Switchgrass Rhizosphere | FGPAKIVMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0207668_121344571 | 3300025972 | Switchgrass Rhizosphere | FGPAKIVMQTLRLPVERLVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN |
Ga0207677_121394381 | 3300026023 | Miscanthus Rhizosphere | LLYPDAPPIGPAKIVMQTLRLPVARLLECGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN |
Ga0207678_100320139 | 3300026067 | Corn Rhizosphere | RLPVARLVECGVDPSDLRAIALVFDRRLSGVVYTGDLQFTN |
Ga0207641_106406423 | 3300026088 | Switchgrass Rhizosphere | PPLGPAKIVMQTLRLPVARLLERGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN |
Ga0207683_116547962 | 3300026121 | Miscanthus Rhizosphere | PPPFGPAKIVMQTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0209799_10823242 | 3300027654 | Tropical Forest Soil | PAKIVMQTLRLPVERLAECGVDPTDLRSISLVFDRRATGTLYVGDLQWSN |
Ga0268266_100394715 | 3300028379 | Switchgrass Rhizosphere | LVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN |
Ga0268265_112280803 | 3300028380 | Switchgrass Rhizosphere | LPVERLVEKGVDPADLRTVALVFDRRAAGTIYVGDLQCSN |
Ga0307503_101229603 | 3300028802 | Soil | KIVMQTLRLPVARLVEWGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0299907_112128581 | 3300030006 | Soil | LLYPDAPPFGPAKIVMQSLRLPVARLLECGVDPSDLRSIALVFDHRPAGVVYAGDLQFSN |
Ga0311349_101509174 | 3300030294 | Fen | QTLRLPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0307499_103004221 | 3300031184 | Soil | LPVARLVERGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0307505_102826941 | 3300031455 | Soil | DPPPFGPAKIVMQTLRLPVARLVEWGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0306917_115347642 | 3300031719 | Soil | AIRASSLYRLLYPDVVFGAGKIVMQSLRLPVHRLVEHGVDPGDIRSIALVFDRRPAGVVYVGEVEVSN |
Ga0307468_1002926551 | 3300031740 | Hardwood Forest Soil | PDPPPFGPAKIVMQTLRLPVARLVECGVDPSDLRAIALVFDRRQTGVVYAGDLQFTN |
Ga0306919_108020801 | 3300031879 | Soil | SLHRLLYPDTGGFSGGKIVMQSLRLAVERLVEAGVDPFDLRSIALVFDKRASGVVYLGDLQVSE |
Ga0306921_119190912 | 3300031912 | Soil | DLVERGVDPSDLRSIAFVFDQPATGVLYVGDIQISH |
Ga0310910_109545071 | 3300031946 | Soil | VERLVEAGVDPFDLRSIALVFDKRASGVVYLGDLQVSE |
Ga0310909_112613022 | 3300031947 | Soil | LHRLPFPDPPPFGPAKIVMQSLRLPVARLIECGVDPDDLRSIALVFDRRQTGVVYTGDLQFTH |
Ga0311301_129781411 | 3300032160 | Peatlands Soil | AKIVMQTLRLPLKLLEDLGVHLTDLRSIAFVFDRRSTGVIYVGDVQVSN |
Ga0307470_119307862 | 3300032174 | Hardwood Forest Soil | PPLGPAKIVMQTLRLPVARLLECGVDPSDLRSIALVFDRRPAGVVYAGDLQFSN |
Ga0307472_1004552721 | 3300032205 | Hardwood Forest Soil | AIPASCLHRLLYPDPPPFGAAKIMMQTLRLPIERLVECGVDPSDLRSIAFVFDRRATGTLYVGDLQCSN |
Ga0335081_100320599 | 3300032892 | Soil | MQTLRLPMHKLVESGVDPSDIRSIALVFDRRLTGVVYVGDVQVSN |
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