Metagenome / Metatranscriptome Family F083192

Basic Information
Family ID	F083192
Family Type	Metagenome / Metatranscriptome
Number of Sequences	113
Average Sequence Length	47 residues
Representative Sequence	MQWSYPELRQRLIKAELWPQGRMARLACYLAGMAAVLFALQKLLGLFAA
Number of Associated Samples	99
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	Yes
Most common taxonomic group	Unclassified
% of genes with valid RBS motifs	26.55 %
% of genes near scaffold ends (potentially truncated)	98.23 %
% of genes from short scaffolds (< 2000 bps)	90.27 %
Associated GOLD sequencing projects	96
AlphaFold2 3D model prediction	Yes
3D model pTM-score	0.42

Most Common Taxonomy
Group	Unclassified (56.637 % of family members)
NCBI Taxonomy ID	N/A
Taxonomy	N/A

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil (15.044 % of family members)
Environment Ontology (ENVO)	Unclassified (20.354 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (51.327 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Transmembrane (alpha-helical)	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 49.35% β-sheet: 0.00% Coil/Unstructured: 50.65%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF07992	Pyr_redox_2	13.27
PF11304	DUF3106	0.88
PF01161	PBP	0.88
PF03544	TonB_C	0.88
PF00521	DNA_topoisoIV	0.88
PF03948	Ribosomal_L9_C	0.88
PF01408	GFO_IDH_MocA	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG0188	DNA gyrase/topoisomerase IV, subunit A	Replication, recombination and repair [L]	0.88
COG0359	Ribosomal protein L9	Translation, ribosomal structure and biogenesis [J]	0.88
COG0810	Periplasmic protein TonB, links inner and outer membranes	Cell wall/membrane/envelope biogenesis [M]	0.88
COG1881	Uncharacterized conserved protein, phosphatidylethanolamine-binding protein (PEBP) family	General function prediction only [R]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
All Organisms	root	All Organisms	43.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
cellular organisms	root	All Organisms → cellular organisms	43.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	43.36 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteria	phylum	All Organisms → cellular organisms → Bacteria → Acidobacteria	40.71 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteriia	class	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia	25.66 %
unclassified Acidobacteria	no rank	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria	15.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteriales	order	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales	25.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteriaceae	family	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	25.66 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Candidatus Koribacter	genus	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	5.31 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	56.64 %
Acidobacteria bacterium	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	15.04 %
Candidatus Koribacter versatilis	species	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2124908044\|A5_c1_ConsensusfromContig6782	Not Available	611	Open in IMG/M
3300001471\|JGI12712J15308_10026628	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1499	Open in IMG/M
3300001867\|JGI12627J18819_10140516	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	986	Open in IMG/M
3300002245\|JGIcombinedJ26739_101287129	Not Available	622	Open in IMG/M
3300004092\|Ga0062389_102373589	Not Available	701	Open in IMG/M
3300004092\|Ga0062389_104716316	Not Available	513	Open in IMG/M
3300005179\|Ga0066684_10542781	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	780	Open in IMG/M
3300005332\|Ga0066388_101638631	All Organisms → cellular organisms → Bacteria	1135	Open in IMG/M
3300005436\|Ga0070713_100470390	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1183	Open in IMG/M
3300005436\|Ga0070713_100504937	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	1141	Open in IMG/M
3300005533\|Ga0070734_10162152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1295	Open in IMG/M
3300005541\|Ga0070733_10060621	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2376	Open in IMG/M
3300005560\|Ga0066670_10047300	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2210	Open in IMG/M
3300005764\|Ga0066903_108109742	Not Available	538	Open in IMG/M
3300005887\|Ga0075292_1022475	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter	837	Open in IMG/M
3300005921\|Ga0070766_10005019	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	6690	Open in IMG/M
3300006028\|Ga0070717_11916318	Not Available	535	Open in IMG/M
3300006032\|Ga0066696_10999700	Not Available	532	Open in IMG/M
3300006050\|Ga0075028_100792474	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	577	Open in IMG/M
3300006052\|Ga0075029_100404328	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	888	Open in IMG/M
3300006052\|Ga0075029_100652266	Not Available	707	Open in IMG/M
3300006086\|Ga0075019_10487519	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	763	Open in IMG/M
3300006086\|Ga0075019_10672676	Not Available	653	Open in IMG/M
3300006102\|Ga0075015_100040734	Not Available	2159	Open in IMG/M
3300006162\|Ga0075030_101212479	Not Available	593	Open in IMG/M
3300006172\|Ga0075018_10451490	Not Available	662	Open in IMG/M
3300006174\|Ga0075014_100162948	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1099	Open in IMG/M
3300006174\|Ga0075014_101015649	Not Available	503	Open in IMG/M
3300007982\|Ga0102924_1210671	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	834	Open in IMG/M
3300009623\|Ga0116133_1217325	Not Available	517	Open in IMG/M
3300009700\|Ga0116217_10094732	Not Available	2051	Open in IMG/M
3300009839\|Ga0116223_10784477	Not Available	545	Open in IMG/M
3300010339\|Ga0074046_10381788	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	853	Open in IMG/M
3300010373\|Ga0134128_12913302	Not Available	527	Open in IMG/M
3300010379\|Ga0136449_100553685	Not Available	1977	Open in IMG/M
3300010379\|Ga0136449_104012200	Not Available	549	Open in IMG/M
3300012199\|Ga0137383_11135009	Not Available	564	Open in IMG/M
3300012208\|Ga0137376_11504877	Not Available	564	Open in IMG/M
3300012930\|Ga0137407_11115715	Not Available	748	Open in IMG/M
3300014201\|Ga0181537_10430314	Not Available	905	Open in IMG/M
3300015372\|Ga0132256_100170605	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2202	Open in IMG/M
3300015372\|Ga0132256_100459576	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1381	Open in IMG/M
3300017924\|Ga0187820_1172564	Not Available	662	Open in IMG/M
3300017930\|Ga0187825_10321057	Not Available	581	Open in IMG/M
3300017961\|Ga0187778_10060844	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2309	Open in IMG/M
3300017973\|Ga0187780_10649032	Not Available	759	Open in IMG/M
3300017995\|Ga0187816_10165989	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	957	Open in IMG/M
3300017995\|Ga0187816_10172086	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	939	Open in IMG/M
3300018006\|Ga0187804_10460161	Not Available	568	Open in IMG/M
3300018007\|Ga0187805_10145784	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1077	Open in IMG/M
3300018022\|Ga0187864_10243793	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	827	Open in IMG/M
3300018038\|Ga0187855_10118001	All Organisms → cellular organisms → Bacteria	1594	Open in IMG/M
3300018058\|Ga0187766_10085871	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1892	Open in IMG/M
3300018085\|Ga0187772_10937012	Not Available	630	Open in IMG/M
3300020579\|Ga0210407_10254353	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1368	Open in IMG/M
3300020580\|Ga0210403_11088265	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	621	Open in IMG/M
3300020583\|Ga0210401_11470884	Not Available	538	Open in IMG/M
3300021088\|Ga0210404_10638744	Not Available	606	Open in IMG/M
3300021170\|Ga0210400_11067899	Not Available	654	Open in IMG/M
3300021180\|Ga0210396_11427665	Not Available	571	Open in IMG/M
3300021402\|Ga0210385_11525589	Not Available	510	Open in IMG/M
3300021403\|Ga0210397_10488975	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	931	Open in IMG/M
3300021404\|Ga0210389_10916432	Not Available	682	Open in IMG/M
3300021407\|Ga0210383_10580395	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	967	Open in IMG/M
3300021420\|Ga0210394_11044202	Not Available	706	Open in IMG/M
3300021420\|Ga0210394_11597190	Not Available	549	Open in IMG/M
3300021432\|Ga0210384_11733238	Not Available	530	Open in IMG/M
3300021474\|Ga0210390_10931070	Not Available	713	Open in IMG/M
3300021477\|Ga0210398_11297151	Not Available	572	Open in IMG/M
3300021478\|Ga0210402_10320177	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1437	Open in IMG/M
3300021479\|Ga0210410_10881773	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	781	Open in IMG/M
3300022557\|Ga0212123_10542286	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	746	Open in IMG/M
3300025134\|Ga0207416_1176602	Not Available	686	Open in IMG/M
3300025916\|Ga0207663_11198896	Not Available	611	Open in IMG/M
3300025916\|Ga0207663_11208312	Not Available	609	Open in IMG/M
3300026142\|Ga0207698_12733967	Not Available	502	Open in IMG/M
3300026308\|Ga0209265_1109059	Not Available	706	Open in IMG/M
3300026869\|Ga0207821_1022689	Not Available	617	Open in IMG/M
3300027063\|Ga0207762_1029572	Not Available	841	Open in IMG/M
3300027521\|Ga0209524_1069413	Not Available	741	Open in IMG/M
3300027591\|Ga0209733_1043618	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1195	Open in IMG/M
3300027824\|Ga0209040_10432664	Not Available	603	Open in IMG/M
3300027842\|Ga0209580_10051018	Not Available	1928	Open in IMG/M
3300027842\|Ga0209580_10473395	Not Available	624	Open in IMG/M
3300027842\|Ga0209580_10567330	Not Available	564	Open in IMG/M
3300027857\|Ga0209166_10194890	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1091	Open in IMG/M
3300027869\|Ga0209579_10140310	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1286	Open in IMG/M
3300027884\|Ga0209275_10036756	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	2290	Open in IMG/M
3300027905\|Ga0209415_10846588	Not Available	630	Open in IMG/M
3300027911\|Ga0209698_10355204	Not Available	1151	Open in IMG/M
3300027911\|Ga0209698_11279482	Not Available	538	Open in IMG/M
3300028747\|Ga0302219_10445509	Not Available	508	Open in IMG/M
3300028789\|Ga0302232_10649207	Not Available	518	Open in IMG/M
3300028800\|Ga0265338_10956146	Not Available	581	Open in IMG/M
3300029999\|Ga0311339_10076464	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	4277	Open in IMG/M
3300030813\|Ga0265750_1086126	Not Available	530	Open in IMG/M
3300031231\|Ga0170824_114686314	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1507	Open in IMG/M
3300031469\|Ga0170819_10462657	Not Available	674	Open in IMG/M
3300031715\|Ga0307476_10546917	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300031718\|Ga0307474_10613547	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	858	Open in IMG/M
3300031753\|Ga0307477_10586853	Not Available	752	Open in IMG/M
3300031754\|Ga0307475_11128392	Not Available	613	Open in IMG/M
3300031910\|Ga0306923_11841018	Not Available	620	Open in IMG/M
3300032001\|Ga0306922_11277051	Not Available	744	Open in IMG/M
3300032174\|Ga0307470_10086233	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	1751	Open in IMG/M
3300032782\|Ga0335082_10023312	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae → Candidatus Koribacter → Candidatus Koribacter versatilis	6636	Open in IMG/M
3300032783\|Ga0335079_10166706	All Organisms → cellular organisms → Bacteria	2462	Open in IMG/M
3300032898\|Ga0335072_10506152	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1249	Open in IMG/M
3300032954\|Ga0335083_10195344	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	1858	Open in IMG/M
3300032955\|Ga0335076_10607830	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	975	Open in IMG/M
3300032955\|Ga0335076_11374592	Not Available	592	Open in IMG/M
3300033158\|Ga0335077_10913810	All Organisms → cellular organisms → Bacteria → Acidobacteria → unclassified Acidobacteria → Acidobacteria bacterium	883	Open in IMG/M
3300033545\|Ga0316214_1020987	All Organisms → cellular organisms → Bacteria → Acidobacteria → Acidobacteriia → Acidobacteriales → Acidobacteriaceae	913	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	95.58%
Host-Associated	Host-Associated	4.42%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	70.80%
Aquatic	Environmental → Aquatic	24.78%
Plants	Host-Associated → Plants	4.42%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	68.14%
Freshwater	Environmental → Aquatic → Freshwater	11.50%
Sediment	Environmental → Aquatic → Sediment	10.62%
Thermal Springs	Environmental → Aquatic → Thermal Springs	2.65%
Peat	Environmental → Terrestrial → Peat	2.65%
Rhizosphere	Host-Associated → Plants → Rhizosphere	2.65%
Rhizoplane	Host-Associated → Plants → Rhizoplane	0.89%
Roots	Host-Associated → Plants → Roots	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	42.48%
Loam	Environmental → Terrestrial → Soil → Loam	14.16%
Wetlands	Environmental → Aquatic → Freshwater → Wetlands	11.50%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	11.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified	10.62%
Hot (42-90C)	Environmental → Aquatic → Thermal Springs → Hot (42-90C)	2.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified	2.65%
Soil	Host-Associated → Plants → Rhizosphere → Soil	2.65%
Epiphytes	Host-Associated → Plants → Rhizoplane → Epiphytes	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	23.01%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	15.04%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	11.50%
Unclassified	Environmental → Aquatic → Sediment → Unclassified → Unclassified	10.62%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil	9.73%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog	5.31%
Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment	5.31%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	4.42%
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	3.54%
Acidic	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic	2.65%
Unclassified	Environmental → Terrestrial → Peat → Unclassified → Unclassified	2.65%
Unclassified	Host-Associated → Plants → Rhizosphere → Soil → Unclassified	2.65%
Unclassified	Environmental → Aquatic → Freshwater → Wetlands → Unclassified	0.89%
Permafrost	Environmental → Terrestrial → Soil → Unclassified → Permafrost	0.89%
Unclassified	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified	0.89%
Unclassified	Host-Associated → Plants → Roots → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	15.04%
Watersheds	Environmental → Aquatic → Sediment → Unclassified → Unclassified → Watersheds	10.62%
Surface Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil	6.19%
Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Soil	6.19%
Freshwater Sediment	Environmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment	5.31%
Peatlands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil	4.42%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	4.42%
Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Forest Soil	4.42%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	4.42%
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	3.54%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	3.54%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil	3.54%
Bog Forest Soil	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog Forest Soil	2.65%
Iron-Sulfur Acid Spring	Environmental → Aquatic → Thermal Springs → Hot (42-90C) → Acidic → Iron-Sulfur Acid Spring	2.65%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	2.65%
Palsa	Environmental → Terrestrial → Peat → Unclassified → Unclassified → Palsa	2.65%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Bog → Peatland	1.77%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	1.77%
Soil	Environmental → Terrestrial → Soil → Loam → Forest Soil → Soil	1.77%
Arabidopsis Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere	1.77%
Bog	Environmental → Aquatic → Freshwater → Wetlands → Bog → Bog	0.89%
Peatland	Environmental → Aquatic → Freshwater → Wetlands → Unclassified → Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Terrestrial Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Permafrost → Soil	0.89%
Rice Paddy Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Rice Paddy Soil	0.89%
Bog Forest Soil	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Bog Forest Soil	0.89%
Corn Rhizosphere	Host-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere	0.89%
Roots	Host-Associated → Plants → Roots → Unclassified → Unclassified → Roots	0.89%
Rhizosphere	Host-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2124908044	Soil microbial communities from permafrost in Bonanza Creek, Alaska, sample from Active Layer A5	Environmental	Open in IMG/M
3300001471	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_Ref_O2	Environmental	Open in IMG/M
3300001867	Texas A ecozone_OM1H0_M2 (Combined assembly for Texas A ecozone Site metagenome samples, ASSEMBLY_DATE=20130705)	Environmental	Open in IMG/M
3300002245	Jack Pine, Ontario site 1_JW_OM2H0_M3 (Jack Pine, Ontario combined, ASSEMBLY_DATE=20131027)	Environmental	Open in IMG/M
3300004092	Coassembly of ECP03_0M1, ECP03_OM2, ECP03_OM3, ECP04_OM1, ECP04_OM2, ECP04_OM3, ECP14_OM1, ECP14_OM2, ECP14_OM3	Environmental	Open in IMG/M
3300005179	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_133	Environmental	Open in IMG/M
3300005332	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)	Environmental	Open in IMG/M
3300005436	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG	Environmental	Open in IMG/M
3300005533	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen06_05102014_R1	Environmental	Open in IMG/M
3300005541	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen05_05102014_R1	Environmental	Open in IMG/M
3300005560	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_119	Environmental	Open in IMG/M
3300005764	Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)	Environmental	Open in IMG/M
3300005887	Rice paddy soil microbial communities from Twitchell Island, California, USA - SF_Rice_20C_80N_403	Environmental	Open in IMG/M
3300005921	Warmed and freeze-thawed soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire - Hubbard Brook CCASE Soil Metagenome WFT 6	Environmental	Open in IMG/M
3300006028	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-3 metaG	Environmental	Open in IMG/M
3300006032	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_145	Environmental	Open in IMG/M
3300006050	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2014	Environmental	Open in IMG/M
3300006052	Freshwater sediment microbial communities from North America - Little Laurel Run_MetaG_LLR_2013	Environmental	Open in IMG/M
3300006086	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2013	Environmental	Open in IMG/M
3300006102	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2013	Environmental	Open in IMG/M
3300006162	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012	Environmental	Open in IMG/M
3300006172	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Cold Stream Run_MetaG_CSR_2014	Environmental	Open in IMG/M
3300006174	Freshwater sediment microbial communities in response to fracking from Pennsylvania, USA - Alex Branch Run_MetaG_ABR_2014	Environmental	Open in IMG/M
3300007982	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG	Environmental	Open in IMG/M
3300009623	Peatland microbial communities from Minnesota, USA, analyzing carbon cycling and trace gas fluxes - June2015DPH_19_10	Environmental	Open in IMG/M
3300009700	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaG	Environmental	Open in IMG/M
3300009839	Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_a_PC metaG	Environmental	Open in IMG/M
3300010339	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - Bog Forest MetaG ECP23OM3	Environmental	Open in IMG/M
3300010373	Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4	Environmental	Open in IMG/M
3300010379	Sb_50d combined assembly	Environmental	Open in IMG/M
3300012199	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_R_40_16 metaG	Environmental	Open in IMG/M
3300012208	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaG	Environmental	Open in IMG/M
3300012930	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZOMad2_2_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300014201	Peatland microbial communities from Houghton, MN, USA - PEATcosm2014_Bin23_10_metaG	Environmental	Open in IMG/M
3300015372	Soil combined assembly	Host-Associated	Open in IMG/M
3300017924	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_5	Environmental	Open in IMG/M
3300017930	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SourceSoil_5	Environmental	Open in IMG/M
3300017961	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP5_20_MG	Environmental	Open in IMG/M
3300017973	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 1015_Q2_SP10_20_MG	Environmental	Open in IMG/M
3300017995	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - SO4_1	Environmental	Open in IMG/M
3300018006	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_4	Environmental	Open in IMG/M
3300018007	Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_5	Environmental	Open in IMG/M
3300018022	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_11_40	Environmental	Open in IMG/M
3300018038	Peatland microbial communities from SPRUCE experiment site at the Marcell Experimental Forest, Minnesota, USA - June2016WEW_8_10	Environmental	Open in IMG/M
3300018058	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0216_QUI02_MP05_20_MG	Environmental	Open in IMG/M
3300018085	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP15_20_MG	Environmental	Open in IMG/M
3300020579	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-27-M	Environmental	Open in IMG/M
3300020580	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-19-M	Environmental	Open in IMG/M
3300020583	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-32-M	Environmental	Open in IMG/M
3300021088	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-M	Environmental	Open in IMG/M
3300021170	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-M	Environmental	Open in IMG/M
3300021180	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-17-O	Environmental	Open in IMG/M
3300021402	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-26-O	Environmental	Open in IMG/M
3300021403	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-O	Environmental	Open in IMG/M
3300021404	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-28-O	Environmental	Open in IMG/M
3300021407	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-14-O	Environmental	Open in IMG/M
3300021420	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-12-M	Environmental	Open in IMG/M
3300021432	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-2-M	Environmental	Open in IMG/M
3300021474	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-H-11-O	Environmental	Open in IMG/M
3300021477	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-O	Environmental	Open in IMG/M
3300021478	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-7-M	Environmental	Open in IMG/M
3300021479	Forest soil microbial communities from Barre Woods Harvard Forest LTER site, Petersham, Massachusetts, United States - Inc-BW-C-4-M	Environmental	Open in IMG/M
3300022557	Paint Pots_combined assembly	Environmental	Open in IMG/M
3300025134	Iron sulfur acid spring bacterial and archeal communities from Banff, Canada, to study Microbial Dark Matter (Phase II) - Paint Pots PPM 11 metaG (SPAdes)	Environmental	Open in IMG/M
3300025916	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaG (SPAdes)	Environmental	Open in IMG/M
3300026142	Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)	Host-Associated	Open in IMG/M
3300026308	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_103 (SPAdes)	Environmental	Open in IMG/M
3300026869	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 53 (SPAdes)	Environmental	Open in IMG/M
3300027063	Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 37 (SPAdes)	Environmental	Open in IMG/M
3300027521	Forest soil microbial communities from Algoma, Ontario, Canada - Jack Pine, Ontario site 1_JW_OM1H0_M1 (SPAdes)	Environmental	Open in IMG/M
3300027591	Forest soil microbial communities from Thunder Bay, Ontario, Canada - Black Spruce, Ontario site 2_A8_OM2_M1 (SPAdes)	Environmental	Open in IMG/M
3300027824	Bog forest soil microbial communities from Calvert Island, British Columbia, Canada - ECP12_OM3 (SPAdes)	Environmental	Open in IMG/M
3300027842	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen04_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027857	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen01_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027869	Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire - Coalmine Soil_Cen03_05102014_R1 (SPAdes)	Environmental	Open in IMG/M
3300027884	Reference soil microbial communities from the Hubbard Brook experimental Forest, New Hampshire, USA - Hubbard Brook CCASE Soil Metagenome REF2 (SPAdes)	Environmental	Open in IMG/M
3300027905	Peat soil microbial communities from Weissenstadt, Germany - SII-SIP-2007 (SPAdes)	Environmental	Open in IMG/M
3300027911	Freshwater sediment microbial communities from Pennsylvania, USA - Little Laurel Run_MetaG_LLR_2012 (SPAdes)	Environmental	Open in IMG/M
3300028747	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_E1_2	Environmental	Open in IMG/M
3300028789	Peat permafrost microbial communities from Stordalen Mire near Abisko, Sweden - II_Palsa_N2_3	Environmental	Open in IMG/M
3300028800	Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaG	Host-Associated	Open in IMG/M
3300029999	I_Palsa_E3 coassembly	Environmental	Open in IMG/M
3300030813	Metatranscriptome of soil microbial communities from Maridalen valley, Oslo, Norway - NSE1 (Metagenome Metatranscriptome)	Environmental	Open in IMG/M
3300031231	Coassembly Site 11 (all samples) - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031469	Fir Spring Coassembly Site 11 - Champenoux / Amance forest	Environmental	Open in IMG/M
3300031715	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_05	Environmental	Open in IMG/M
3300031718	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_05	Environmental	Open in IMG/M
3300031753	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM2C_515	Environmental	Open in IMG/M
3300031754	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesECM1C_515	Environmental	Open in IMG/M
3300031910	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)	Environmental	Open in IMG/M
3300032001	Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082 (v2)	Environmental	Open in IMG/M
3300032174	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM3C_05	Environmental	Open in IMG/M
3300032782	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.1	Environmental	Open in IMG/M
3300032783	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3	Environmental	Open in IMG/M
3300032898	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.1	Environmental	Open in IMG/M
3300032954	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.2	Environmental	Open in IMG/M
3300032955	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_2.5	Environmental	Open in IMG/M
3300033158	Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.1	Environmental	Open in IMG/M
3300033545	Spruce roots microbial communities from Maridalen valley, Oslo, Norway - NRE4	Host-Associated	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
A5_c1_01425380	2124908044	Soil	MQWSYPELRFRLIKAGLWPEGRLARLACYLAGMAGVLFGLQKLLGLFAKSWGEHLGG
JGI12712J15308_100266281	3300001471	Forest Soil	MQWSYAEIRQALIRAELWPQGRVARIAWYQVALAGILFVF
JGI12627J18819_101405161	3300001867	Forest Soil	MQWSYPELRHRLSQAGLWPQGRMARLACYLAAMAAGLFALQKLLDLFARSWG
JGIcombinedJ26739_1012871292	3300002245	Forest Soil	MQWSYPEFRHRLIKTGLWPQGRVARLACYLAAMAGVLFALQKLLAVLV
Ga0062389_1023735891	3300004092	Bog Forest Soil	MQWSYPELRQRLIEAELWPQGRMARLACYLAGMALALFALKELLGLFAPAW
Ga0062389_1047163161	3300004092	Bog Forest Soil	MQWSYPELRVRLIEAELWPQGRMARLACYLAGMSGVLFALQKLLGLIAPTWGAHLGGWV
Ga0066684_105427811	3300005179	Soil	MPAKRMQWSYLELRRRLIEAELWPRGRMSRLACYLAGSAIVLYALRILLGLFAPSWGAHLGG
Ga0066388_1016386314	3300005332	Tropical Forest Soil	MQWSYQELRRTLIGANLWPHGRMSRLACYLAGLAIALFALEKLLGLFSLS
Ga0070713_1004703901	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MQWSYPEVRRKLIEADLWPKGRMAYLACYLAGLAIILFVLQELLGLFAATWGA
Ga0070713_1005049373	3300005436	Corn, Switchgrass And Miscanthus Rhizosphere	MPAKRMQGSYLELRRRLIEAELWPRGRMSRLACYLAGSAIVLYALRILLGLFAPSWGAHL
Ga0070734_101621521	3300005533	Surface Soil	MEWSYSELKSRLLQAELWPQGRMARLACYLAALAVGLLGLENLLG
Ga0070733_100606214	3300005541	Surface Soil	MQWSYPEIRQKLIQVELWPQGRMARLACYLAALAALLFA
Ga0066670_100473001	3300005560	Soil	MPAKRMQWSYLELRRRLIEAELWPRGRMSRLACYLAGSAIVLY
Ga0066903_1081097422	3300005764	Tropical Forest Soil	MQWSYPELRSRLIRAGLWPQGKMSLLACYLAVLAAVLYILEKLLGLFAR
Ga0075292_10224751	3300005887	Rice Paddy Soil	MKWSYLELRRSLIQTELWPQGRMARLACYLAGSAVVLYALEKLLGLFAPTWG
Ga0070766_100050199	3300005921	Soil	MQRSYPEVRLRLIKAGLWPEGRMARLACYLAAMAAVLFAL
Ga0070717_119163182	3300006028	Corn, Switchgrass And Miscanthus Rhizosphere	MQWSYPELRRRLIQAELWPQGRMARVACYLAGLALALFALQELLGLFAPSWGQHL
Ga0066696_109997001	3300006032	Soil	MPAKRMQWSYLELRRRLIEAELWPRGRMSRLACYLAGSAIVLYALRILLGLFAPSWGA
Ga0075028_1007924742	3300006050	Watersheds	MQWSYPELRRRLVEAELWPQGKMARLACYLAGMAVGLYGLQKLLGMFAASWG*
Ga0075029_1004043283	3300006052	Watersheds	MQWSYPKLRGRLIEAGLWPESRMARLACYLAGMAAVLFGLQKLLGLFAASWG
Ga0075029_1006522661	3300006052	Watersheds	MQWSYPELRQRLIKAELWPQGRMARLACYLGGMAAVLF
Ga0075019_104875192	3300006086	Watersheds	MEWSHPELRHRLIKAGLWPESRMARLACYLAAMAGVLFVVQKLLGLFAR
Ga0075019_106726763	3300006086	Watersheds	MEWSYPELRRRLIEAELWPEGRLARLACYLAGLAAVLYGLQKLLGLFA
Ga0075015_1000407344	3300006102	Watersheds	MQWSHPELRRSLIKAGFWPEGRMARLACYLAALAAA
Ga0075030_1012124792	3300006162	Watersheds	MQWSYPELRQRLIEAELWPQGRMARLACYLATMAAVLF
Ga0075018_104514901	3300006172	Watersheds	MPLFYSELRSRLSRAGLWPEGRMARIACYLMGLAAALFALQKLLGLFALAWGDHLG
Ga0075014_1001629481	3300006174	Watersheds	MQWSYPELRRKLIEAGLWPQGRMARLSCYLAALAIALFVLEKLLGFFSLSWG
Ga0075014_1010156492	3300006174	Watersheds	MQWSYPEIRQRLIDAELWPQRRMARLACYLAGLAVGLFALEELLGLFAASW
Ga0102924_12106713	3300007982	Iron-Sulfur Acid Spring	MRWSYPELRLRLIHAGLWPEGRMARLACYLAAMAGALFALQKLLELLTQAW
Ga0116133_12173251	3300009623	Peatland	MQWSYPEVRQRLITAGLWPQGRMASLACYLAGMAGVLFALQRLLGMFARSW
Ga0116217_100947321	3300009700	Peatlands Soil	MQRSYPELRRRLTEAGLWPEGRMARLACYLAGMAAVLFGLQKLLGLFAASWGDHLGGWV
Ga0116223_107844771	3300009839	Peatlands Soil	MQWSYPEMRGRLIQAGLWPEGRMARLACYLAGMAGVLYALQKLLGLFA
Ga0074046_103817883	3300010339	Bog Forest Soil	MQWSYPELRLRLIKAGLWPEGRMARLACYLAGMAAVLFALQKLLGM
Ga0134128_129133022	3300010373	Terrestrial Soil	MQWSYPELRRRLIQAEMWPQGRMARVACYLAALALALFALQELLG
Ga0136449_1005536851	3300010379	Peatlands Soil	MQLPYPKLRLHLLKAGLWPETRMARLACYLAGMAA
Ga0136449_1040122001	3300010379	Peatlands Soil	MQWSYPELRRRLIQAELWPEGRMARLACYLAGMAALLFAVQKLLGLFAK
Ga0137383_111350091	3300012199	Vadose Zone Soil	MQWSYPELRHRLIQAELWPEGRMARIAWYLCGLGAALFILQKVLGMFGSPWGQ*
Ga0137376_115048771	3300012208	Vadose Zone Soil	MQWSYPELRRKLTEVGLWPQGRMSRLACYLAALAIA
Ga0137407_111157151	3300012930	Vadose Zone Soil	MQWSYPELRRRLVEAELWPRGKMARLACYLTGMAVGLFALQRLLSLIAA
Ga0181537_104303143	3300014201	Bog	MEWSYPELRRRLTEAGLWPRSRMARLACYLAGLAVALYA
Ga0132256_1001706051	3300015372	Arabidopsis Rhizosphere	MQWSYPELRHRLMQAGLWPEGRMARLACYLAGLAALLF
Ga0132256_1004595761	3300015372	Arabidopsis Rhizosphere	MQWSYSELRHRLTKAGLWPEGRMARLACYLVGMSAA
Ga0187820_11725642	3300017924	Freshwater Sediment	MQWSYPELRRRLIKAGLWPEGRMARLACYLAAMGVALFALQRLLD
Ga0187825_103210572	3300017930	Freshwater Sediment	MQWSYPELRRRLSKAGLWPEGRMARLACYLAGMAVVLFALQKLLDLFAASWGNHLGGWVE
Ga0187778_100608441	3300017961	Tropical Peatland	MQWSYPELRQRLIKAGLWPEGRMARLACYLAGMAAVLFGLQKLLGLLS
Ga0187780_106490323	3300017973	Tropical Peatland	MHWSYSEVRSRLVRAGLWPEGRMARLACYLAGLAAVLFALQKVLAMFAPSWGE
Ga0187816_101659893	3300017995	Freshwater Sediment	MQWSYPELRQRLMKAELWPQGRMARLACYLASLAIVLFALQKLLGLFAAS
Ga0187816_101720861	3300017995	Freshwater Sediment	MQWSYPEIRSRLVRAELWPRGRMAKVACYLGALAIALFA
Ga0187804_104601611	3300018006	Freshwater Sediment	MQWSYPELRGRLIRAELWPQGRMARLACYLAALAALLYALEKLLGVFARSWGDS
Ga0187805_101457841	3300018007	Freshwater Sediment	MRLFYSEWRQRLIRAELWPQGRMARLACYLAGMAIVLFGLRKLLA
Ga0187864_102437931	3300018022	Peatland	MNMEWSYPESRRRLIAAELWPQGRMARLACYLAGMAAVLFG
Ga0187855_101180014	3300018038	Peatland	MQWSYPELRRKLIEAELWPQGRMARLACYLTALAAVL
Ga0187766_100858711	3300018058	Tropical Peatland	MHWSYSEVRSRLVRAGLWPEGRMARLACYLAGLAAVLFAL
Ga0187772_109370121	3300018085	Tropical Peatland	MQWSYAELRRRLIKAGLWPEGRMARLACYLAGMAAAL
Ga0210407_102543533	3300020579	Soil	MQRSYPEVRLRLIKAGLWPEGRMARLACYLAAMAAVL
Ga0210403_110882651	3300020580	Soil	MQWSYPELRRRLIEAELWPQGRMARITCYILALGAGLFAL
Ga0210401_114708842	3300020583	Soil	MPWSYPELRLRLIKADLWPEGRMARLACYLAAMAGLLYA
Ga0210404_106387441	3300021088	Soil	MEWSYPELKRKLTQAGLWPQGRLARLACYLTALAATL
Ga0210400_110678991	3300021170	Soil	MQWSYPEVRRRLIEAELWPQGRMARLACYLAAMAAVLFALQEFLGLFSSWGE
Ga0210396_114276651	3300021180	Soil	MPWSYPELRLRLIKADLWPEGRMARLACYLAAMAG
Ga0210385_115255892	3300021402	Soil	MQWSYPDLRQRLVEAELWPQGRMARLACYLTAMAAFLFGLQRLLGLFARSWGDHL
Ga0210397_104889753	3300021403	Soil	MEWSYPELKRKLTQAGLWPQGRLARLACYLTALAATLFVLQKLLGLFRL
Ga0210389_109164321	3300021404	Soil	MQWSYPELRLRLIKADLWPEGRMARLACYLAAMAGLLYAVEKLLGLLAPTWGDHLGGWV
Ga0210383_105803951	3300021407	Soil	MEWSYPELKRKLTQAGLWPQGRLARLACYLTALAATLFVLQKLLGLFRLSWGEHL
Ga0210394_110442023	3300021420	Soil	MQRSYPEVRLRLIKAGLWPEGRMARLACYLAAMAAVLFALQKLMGLFARSW
Ga0210394_115971902	3300021420	Soil	MQWSYSELRQRLIKADLWPQGRMARLASYLAGMAAVLF
Ga0210384_117332381	3300021432	Soil	MQRSYPEVRLRLIKAGLWPEGRMARLACYLAAMAAVLF
Ga0210390_109310703	3300021474	Soil	MQWSYPELRRKLIEADLWPQGRMARLACYLAALAVVLF
Ga0210398_112971512	3300021477	Soil	MQWSYSELRQRLIKADLWPQGRMARLACYLAGMAAVLFALQMLL
Ga0210402_103201771	3300021478	Soil	MNVKWSHPELRYRLRQAGLWPESRMARIAWYLLGLGGFLF
Ga0210410_108817731	3300021479	Soil	MQWSYPELRLRLAKAELWPQGRMARIAWYLFGMSAVLFVLRKVLGLFGS
Ga0212123_105422863	3300022557	Iron-Sulfur Acid Spring	MRWSYPEFRLRLIKAGLWPEGRMARLACYLAAMAVVLFGLQ
Ga0207416_11766021	3300025134	Iron-Sulfur Acid Spring	MRWSYPELRLRLIHAGLWPEGRMARLACYLAAMAGALFALQKLLELLTQ
Ga0207663_111988961	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQWSYLELRRRLIEAELWPRARMSRLACYLAGSAIGLYAL
Ga0207663_112083121	3300025916	Corn, Switchgrass And Miscanthus Rhizosphere	MQWSYPELRVRLIEAELWPQGRMARLACYLAGMAVVLFGMEKLLGLFSRSWGQY
Ga0207698_127339671	3300026142	Corn Rhizosphere	MPAKRMQWSYLELRRKLIEAELWPRGRMARLACYLAGSALVLYALRKLLG
Ga0209265_11090593	3300026308	Soil	MPAKRMQWSYLELRRRLIEAELWPRGRMSRLACYLAGSAIVLYALRILLGLFAPSWGAHL
Ga0207821_10226893	3300026869	Tropical Forest Soil	MQWTYPELRHRLIQAGLWPEGRMARLACYLAGMAAVLFGLQELLGLFAASW
Ga0207762_10295721	3300027063	Tropical Forest Soil	MQWTYPELRHRLIQAGLWPEGRMARLACYLAGMAAVLFGLQELLGLFAA
Ga0209524_10694131	3300027521	Forest Soil	MQRSYPEVRLRLIKAGLWPEGRMARLACYLAAMAAVLFAWRLSPRAA
Ga0209733_10436181	3300027591	Forest Soil	MQWSYPEMRHRLSQAGLWPQGRMARLACYLAAMAAGLFALQKLLDLFARSWGDHLG
Ga0209040_104326641	3300027824	Bog Forest Soil	MNMEWSYPELRRRLIAAELWPEGRMARLACYLAGMAAVLVGLQKLLGL
Ga0209580_100510184	3300027842	Surface Soil	MQWSYPELRRKLIEADLWPQGRMARLACYLAALAVVLFALEKLLGL
Ga0209580_104733951	3300027842	Surface Soil	MRWSYPELRLRLVDAGLWPEGRMARLACYLAAMAGVLFGLQKL
Ga0209580_105673302	3300027842	Surface Soil	MQWSYPELRRRLTKAELWPQGRMARLACYLAAMAVVLFALQELLRVFAASWGNHLGGW
Ga0209166_101948903	3300027857	Surface Soil	MQWSYPEIRQKLIQVELWPQGRMARLACYLAGLAALLFALEKFV
Ga0209579_101403101	3300027869	Surface Soil	MQWSYPEIRQKLIQVELWPQGRMARLACYLAGLAALLFALEKFVGLFAAAWGEHLGGWV
Ga0209275_100367561	3300027884	Soil	MQWSYQDVRRRLIKAGLWPEGRLARLACYLAGMAA
Ga0209415_108465881	3300027905	Peatlands Soil	MQWSYPEMRGRLIRAGLWPEGRMARLACYLAGMAGVLYALQKLLGLLAPSWGDHLGGW
Ga0209698_103552041	3300027911	Watersheds	NRMQWSYPKLRQRLIEAELWPQGRMARLACYLGGMAAVLFGPL
Ga0209698_112794821	3300027911	Watersheds	MQWSYPELRQRLIKAELWPQGRMARLACYLAGMAAVLFALQKLLGLFAA
Ga0302219_104455092	3300028747	Palsa	MEWSYPELRRRLTEAGLWPKSRMARLACYLAGLAVALYALKEVLGLFAPT
Ga0302232_106492072	3300028789	Palsa	MQWSYPKLRRRLITAGLWPEGRVARLACYLAGMAVVLFGLQKL
Ga0265338_109561461	3300028800	Rhizosphere	MQWSYPELRQRLIKADLWPQGRMARLACYLAGMGAVLFAL
Ga0311339_100764641	3300029999	Palsa	MEWSYPELRRRLTEAGLWPKSRMARLACYLAGLAVALYALKEVLGLFAPTWGEH
Ga0265750_10861261	3300030813	Soil	MQWSYPELRRRLITAGLWPEGRVARLACYLAGMAVV
Ga0170824_1146863143	3300031231	Forest Soil	MQWSYPEVRRRLIQAELWPEGRLARLACYLAGMAGVLFALQRLLGLFAKSWGE
Ga0170819_104626571	3300031469	Forest Soil	MQWSYPEVRRRLIQAELWPEGRLARLACYLAGMAGVLFALQR
Ga0307476_105469171	3300031715	Hardwood Forest Soil	MQWSYPELRLRLLKAELWPQGRMARIAWYLFGMAAVLFVLRKVLALFGSSWGQY
Ga0307474_106135471	3300031718	Hardwood Forest Soil	MRWSYQEVRLWLIKAGLWPEGRLARLACYLASMAAVLFA
Ga0307477_105868533	3300031753	Hardwood Forest Soil	MELSYPELRRRLIKAELWPEGRMARIAWYFFGLAAVLFVLQKMFGLLGISWGQYLSGW
Ga0307475_111283921	3300031754	Hardwood Forest Soil	MQWSYPELRQRLIEAELWPQGRMARLACYLAGMAAGLFGLQKLLGLFAASWGQYLV
Ga0306923_118410181	3300031910	Soil	MQWSYPELRGKLIKADLWPRGRMARLACYLAGLAIVLFGLEKLLSVFSLAWGEHLGGW
Ga0306922_112770512	3300032001	Soil	MTPNMQWSYQQLRRRLTGVGLWPQGRMSRLACYLAGLAVALFALEKLLGLFSLSWGGHLG
Ga0307470_100862334	3300032174	Hardwood Forest Soil	MQWSYPELRRKLTEVGLWPQGRMARLACYLAALAIALFALEKLLGLFSLSWGE
Ga0335082_100233129	3300032782	Soil	MPSSYRDLRHNLIRAGLWPEGRIARLACYLAGLAAVLFALE
Ga0335079_101667061	3300032783	Soil	MEWSYPETRRRLIGADLWPQSRMARLACYLSALAVGLFALEKLLNLFS
Ga0335072_105061521	3300032898	Soil	MEWSYPELRSRLVRAELWPQGRLARLACYLAGLAVVLYALEKLLGLFSVGQHLS
Ga0335083_101953441	3300032954	Soil	MQWSYPELRQRLIDAELWPQGRMARLACYLTGLAAVLFALEKLLGLFA
Ga0335076_106078303	3300032955	Soil	MEWSYPKLRERLIRAELWPQGRMARLACYLAGLAVAL
Ga0335076_113745921	3300032955	Soil	MQWSYPELRQKLIQADLWPQGRMARLACYLGGMAVGLFILEKLLDLFSPAWGEHLGGW
Ga0335077_109138101	3300033158	Soil	MQWSYSQLRERLIQAELWPQGRIARLACYLAALAAGLF
Ga0316214_10209873	3300033545	Roots	MQWSYREIRQQMIDADLWPKGRLARLACYLAASAGLLYILKK

Structure Viewer


Per-residue confidence (pLDDT): 0-50 51-70 71-90 91-100	pTM-score: 0.42
Secondary Structure: α-helix β-sheet Coil Turn	pTM-score: 0.42
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NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome / Metatranscriptome Family F083192

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Predicted 3D Structure

Low Quality Model:

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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