NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
x
This website uses cookies to improve user experience. By using NMPFamDB you consent to all cookies in accordance with our privacy policy. OK
Metagenome Family F083141

Metagenome Family F083141

Go to section:
Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
Select file to download:
   Download


Overview

Basic Information
Family ID F083141
Family Type Metagenome
Number of Sequences 113
Average Sequence Length 108 residues
Representative Sequence MQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL
Number of Associated Samples 63
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence No
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 69.16 %
% of genes near scaffold ends (potentially truncated) 43.36 %
% of genes from short scaffolds (< 2000 bps) 84.07 %
Associated GOLD sequencing projects 57
AlphaFold2 3D model prediction Yes
3D model pTM-score0.64

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
Powered by Skylign

Most Common Taxonomy
Group Bacteria (74.336 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil
(33.628 % of family members)
Environment Ontology (ENVO) Unclassified
(53.097 % of family members)
Earth Microbiome Project Ontology (EMPO) Free-living → Non-saline → Soil (non-saline)
(70.796 % of family members)



 ⦗Top⦘

Multiple Sequence Alignments

Select alignment to view:      


 ⦗Top⦘

Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Globular Signal Peptide: No Secondary Structure distribution: α-helix: 41.13%    β-sheet: 7.80%    Coil/Unstructured: 51.06%
Feature Viewer
Powered by Feature Viewer

Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  
pTM-score: 0.64
Powered by PDBe Molstar

Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.


 ⦗Top⦘

Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00476DNA_pol_A 34.51
PF00589Phage_integrase 1.77
PF13280WYL 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG0749DNA polymerase I, 3'-5' exonuclease and polymerase domainsReplication, recombination and repair [L] 34.51


 ⦗Top⦘

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms74.34 %
UnclassifiedrootN/A25.66 %

Visualization
Powered by ApexCharts

Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
2070309004|prs_FHA1B5K04Y70JHNot Available523Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101696946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7806Open in IMG/M
3300000364|INPhiseqgaiiFebDRAFT_101698815All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71150Open in IMG/M
3300000597|AF_2010_repII_A1DRAFT_10027063All Organisms → cellular organisms → Bacteria → Proteobacteria1558Open in IMG/M
3300005332|Ga0066388_100124843All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium3106Open in IMG/M
3300005332|Ga0066388_100139681All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria2984Open in IMG/M
3300005332|Ga0066388_100223847All Organisms → cellular organisms → Bacteria → Proteobacteria2512Open in IMG/M
3300005332|Ga0066388_100633487All Organisms → cellular organisms → Bacteria → Proteobacteria1687Open in IMG/M
3300005332|Ga0066388_100882485All Organisms → cellular organisms → Bacteria → Proteobacteria1475Open in IMG/M
3300005332|Ga0066388_101378367All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA0051223Open in IMG/M
3300005332|Ga0066388_101444868All Organisms → cellular organisms → Bacteria → Proteobacteria1198Open in IMG/M
3300005332|Ga0066388_102316905All Organisms → cellular organisms → Bacteria → Proteobacteria972Open in IMG/M
3300005332|Ga0066388_103918903All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5759Open in IMG/M
3300005332|Ga0066388_105435836All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria646Open in IMG/M
3300005332|Ga0066388_108262079All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA005519Open in IMG/M
3300005518|Ga0070699_100004179All Organisms → cellular organisms → Bacteria → Proteobacteria12774Open in IMG/M
3300005713|Ga0066905_100938111Not Available760Open in IMG/M
3300005713|Ga0066905_102241412All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA005510Open in IMG/M
3300005764|Ga0066903_100584277All Organisms → cellular organisms → Bacteria → Proteobacteria1929Open in IMG/M
3300005764|Ga0066903_101152877Not Available1434Open in IMG/M
3300005764|Ga0066903_101733267All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51191Open in IMG/M
3300005764|Ga0066903_102128612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71080Open in IMG/M
3300005764|Ga0066903_102219037All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria1059Open in IMG/M
3300005764|Ga0066903_103203099Not Available885Open in IMG/M
3300005764|Ga0066903_103239836All Organisms → cellular organisms → Bacteria880Open in IMG/M
3300005764|Ga0066903_103475549All Organisms → cellular organisms → Bacteria → Proteobacteria849Open in IMG/M
3300005764|Ga0066903_105475028Not Available669Open in IMG/M
3300005764|Ga0066903_105686183All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria656Open in IMG/M
3300005764|Ga0066903_107141862All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5578Open in IMG/M
3300005764|Ga0066903_108742160All Organisms → cellular organisms → Bacteria → Proteobacteria → delta/epsilon subdivisions → Deltaproteobacteria → Deltaproteobacteria incertae sedis → SAR324 cluster → SAR324 cluster bacterium JCVI-SC AAA005515Open in IMG/M
3300006038|Ga0075365_10417878Not Available947Open in IMG/M
3300006173|Ga0070716_100777884All Organisms → cellular organisms → Bacteria739Open in IMG/M
3300006844|Ga0075428_102152051All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7576Open in IMG/M
3300006904|Ga0075424_101942150All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7621Open in IMG/M
3300009094|Ga0111539_12866341All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7558Open in IMG/M
3300009137|Ga0066709_101174377All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51130Open in IMG/M
3300009700|Ga0116217_10218305All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51247Open in IMG/M
3300009826|Ga0123355_11548629All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7643Open in IMG/M
3300010043|Ga0126380_11732506Not Available563Open in IMG/M
3300010048|Ga0126373_12777912All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7546Open in IMG/M
3300010361|Ga0126378_10449545All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51402Open in IMG/M
3300010361|Ga0126378_11410333All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7789Open in IMG/M
3300010366|Ga0126379_10484071All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51306Open in IMG/M
3300010398|Ga0126383_11043165All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5906Open in IMG/M
3300010398|Ga0126383_13265252Not Available530Open in IMG/M
3300015371|Ga0132258_11983998All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51464Open in IMG/M
3300015372|Ga0132256_102600245All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5607Open in IMG/M
3300016270|Ga0182036_10540007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5928Open in IMG/M
3300016270|Ga0182036_10915612All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7719Open in IMG/M
3300016270|Ga0182036_11887896All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7506Open in IMG/M
3300016294|Ga0182041_10876009All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5806Open in IMG/M
3300016294|Ga0182041_11720979All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7580Open in IMG/M
3300016319|Ga0182033_10973760All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5754Open in IMG/M
3300016319|Ga0182033_11555077Not Available598Open in IMG/M
3300016319|Ga0182033_11712538All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7570Open in IMG/M
3300016319|Ga0182033_12034510All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7523Open in IMG/M
3300016341|Ga0182035_10668046All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7903Open in IMG/M
3300016357|Ga0182032_10650687All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense881Open in IMG/M
3300016371|Ga0182034_10206898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51521Open in IMG/M
3300016371|Ga0182034_10688251All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. Oc8868Open in IMG/M
3300016371|Ga0182034_10723222All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5848Open in IMG/M
3300016371|Ga0182034_10808363All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5802Open in IMG/M
3300016404|Ga0182037_11818946All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7544Open in IMG/M
3300016422|Ga0182039_10037007All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S53200Open in IMG/M
3300016422|Ga0182039_10572196All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7984Open in IMG/M
3300016422|Ga0182039_11378128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5640Open in IMG/M
3300016422|Ga0182039_11677573All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7581Open in IMG/M
3300016445|Ga0182038_10029026All Organisms → cellular organisms → Bacteria3453Open in IMG/M
3300016445|Ga0182038_10770005All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5842Open in IMG/M
3300017822|Ga0187802_10016745All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S52468Open in IMG/M
3300018481|Ga0190271_13812932All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium jicamae504Open in IMG/M
3300027703|Ga0207862_1155309All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5684Open in IMG/M
3300030494|Ga0310037_10200771All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5884Open in IMG/M
3300031545|Ga0318541_10007130All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium4823Open in IMG/M
3300031546|Ga0318538_10729418Not Available538Open in IMG/M
3300031561|Ga0318528_10459544Not Available684Open in IMG/M
3300031573|Ga0310915_10186434All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51447Open in IMG/M
3300031736|Ga0318501_10685442Not Available565Open in IMG/M
3300031744|Ga0306918_10248128All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51358Open in IMG/M
3300031744|Ga0306918_10740433All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5769Open in IMG/M
3300031768|Ga0318509_10313560All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5878Open in IMG/M
3300031771|Ga0318546_10987649All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7592Open in IMG/M
3300031796|Ga0318576_10280460All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5787Open in IMG/M
3300031835|Ga0318517_10391556Not Available628Open in IMG/M
3300031860|Ga0318495_10281536All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5742Open in IMG/M
3300031879|Ga0306919_10220191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51418Open in IMG/M
3300031879|Ga0306919_10979662Not Available647Open in IMG/M
3300031879|Ga0306919_11390635Not Available530Open in IMG/M
3300031890|Ga0306925_10592711All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51171Open in IMG/M
3300031890|Ga0306925_11158288Not Available778Open in IMG/M
3300031910|Ga0306923_10007552All Organisms → cellular organisms → Bacteria → Proteobacteria10845Open in IMG/M
3300031910|Ga0306923_10226173All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_72140Open in IMG/M
3300031910|Ga0306923_10705600All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S51123Open in IMG/M
3300031941|Ga0310912_10789562All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → Bradyrhizobium hipponense734Open in IMG/M
3300031942|Ga0310916_10882197Not Available751Open in IMG/M
3300031942|Ga0310916_11718777Not Available507Open in IMG/M
3300031945|Ga0310913_10630403Not Available760Open in IMG/M
3300031947|Ga0310909_10661761All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7870Open in IMG/M
3300031954|Ga0306926_10096647All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria3617Open in IMG/M
3300031954|Ga0306926_12243347Not Available607Open in IMG/M
3300032035|Ga0310911_10753947Not Available563Open in IMG/M
3300032066|Ga0318514_10441898All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales → Bradyrhizobiaceae → Bradyrhizobium → unclassified Bradyrhizobium → Bradyrhizobium sp. 41S5691Open in IMG/M
3300032076|Ga0306924_11198363Not Available822Open in IMG/M
3300032160|Ga0311301_10058675All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria8490Open in IMG/M
3300032261|Ga0306920_100987746All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_71226Open in IMG/M
3300032261|Ga0306920_102646485Not Available687Open in IMG/M
3300033290|Ga0318519_10852191All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → unclassified Alphaproteobacteria → Alphaproteobacteria bacterium 13_2_20CM_2_64_7562Open in IMG/M



 ⦗Top⦘

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil33.63%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil23.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil19.47%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil6.19%
Peatlands SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Peatlands Soil2.65%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere2.65%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil1.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
Freshwater SedimentEnvironmental → Aquatic → Freshwater → Wetlands → Sediment → Freshwater Sediment0.89%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil0.89%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil0.89%
Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Forest Soil0.89%
Green-Waste CompostEnvironmental → Terrestrial → Soil → Unclassified → Tropical Rainforest → Green-Waste Compost0.89%
Termite GutHost-Associated → Arthropoda → Digestive System → Gut → Unclassified → Termite Gut0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere0.89%
Populus EndosphereHost-Associated → Plants → Roots → Bulk Soil → Unclassified → Populus Endosphere0.89%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Arabidopsis Rhizosphere0.89%

Visualization
Powered by ApexCharts



Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
2070309004Green-waste compost microbial communities at University of California, Davis, USA, from solid state bioreactor - Luquillo Rain Forest, Puerto RicoEnvironmentalOpen in IMG/M
3300000364Soil microbial communities from Great Prairies - Iowa, Native Prairie soilEnvironmentalOpen in IMG/M
3300000597Forest soil microbial communities from Amazon forest - 2010 replicate II A1EnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005518Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-50-3 metaGEnvironmentalOpen in IMG/M
3300005713Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 36 (version 2)EnvironmentalOpen in IMG/M
3300005764Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 1 (version 2)EnvironmentalOpen in IMG/M
3300006038Populus root and rhizosphere microbial communities from Tennessee, USA - Endosphere MetaG P. deltoides DD176-5Host-AssociatedOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006844Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. deltoides SRZDD2Host-AssociatedOpen in IMG/M
3300006904Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD3Host-AssociatedOpen in IMG/M
3300009094Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD1 (version 2)Host-AssociatedOpen in IMG/M
3300009137Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_158EnvironmentalOpen in IMG/M
3300009700Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_4_PS metaGEnvironmentalOpen in IMG/M
3300009826Embiratermes neotenicus P1 segment gut microbial communities from Petit-Saut dam, French Guiana - Emb289 P1Host-AssociatedOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010048Tropical forest soil microbial communities from Panama - MetaG Plot_11EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010366Tropical forest soil microbial communities from Panama - MetaG Plot_24EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015372Soil combined assemblyHost-AssociatedOpen in IMG/M
3300016270Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080EnvironmentalOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016319Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00HEnvironmentalOpen in IMG/M
3300016341Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300016371Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172EnvironmentalOpen in IMG/M
3300016404Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.082EnvironmentalOpen in IMG/M
3300016422Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111EnvironmentalOpen in IMG/M
3300016445Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108EnvironmentalOpen in IMG/M
3300017822Wetland sediment microbial communities from Neuse River Estuary, North Carolina, USA - Control_2EnvironmentalOpen in IMG/M
3300018481Populus adjacent soil microbial communities from riparian zone of Weber River, Utah, USA - 356 TEnvironmentalOpen in IMG/M
3300027703Tropical forest soil microbial communities from Luquillo Experimental Forest, Puerto Rico - Sample 81 (SPAdes)EnvironmentalOpen in IMG/M
3300030494Peat soil microbial communities from Weissenstadt, Germany - Sb_50d_3_AS metaG (v2)EnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031546Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f23EnvironmentalOpen in IMG/M
3300031561Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.052b4f26EnvironmentalOpen in IMG/M
3300031573Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN111EnvironmentalOpen in IMG/M
3300031736Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f21EnvironmentalOpen in IMG/M
3300031744Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.00H (v2)EnvironmentalOpen in IMG/M
3300031748Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f22EnvironmentalOpen in IMG/M
3300031768Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.084b2f22EnvironmentalOpen in IMG/M
3300031771Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.169b2f19EnvironmentalOpen in IMG/M
3300031794Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.174b1f23EnvironmentalOpen in IMG/M
3300031796Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.089b5f24EnvironmentalOpen in IMG/M
3300031835Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f21EnvironmentalOpen in IMG/M
3300031860Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.108b1f25EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031890Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.176 (v2)EnvironmentalOpen in IMG/M
3300031910Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.108 (v2)EnvironmentalOpen in IMG/M
3300031941Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX080EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300031945Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.OX082EnvironmentalOpen in IMG/M
3300031947Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.T000HEnvironmentalOpen in IMG/M
3300031954Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178 (v2)EnvironmentalOpen in IMG/M
3300032035Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.HF170EnvironmentalOpen in IMG/M
3300032066Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.176b2f18EnvironmentalOpen in IMG/M
3300032076Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statanox.12C.anox.44.000.111 (v2)EnvironmentalOpen in IMG/M
3300032160Sb_50d combined assembly (MetaSPAdes)EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300033289Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.AN108EnvironmentalOpen in IMG/M
3300033290Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.178b2f15EnvironmentalOpen in IMG/M

Geographical Distribution
Zoom:     Powered by OpenStreetMap



 ⦗Top⦘

Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
prs_041708802070309004Green-Waste CompostLQAKAPAPVERKKAELFVKVPLWWIRTAAKHARSPATLVMVELLYRSYKAKSMTFSLPSGGLEKFGVSREIKRRVLRDLERGGLIAVGRQPRKSPIITLVLL
INPhiseqgaiiFebDRAFT_10169694633300000364SoilTLLSGAAAWPPKKKRKVEPFVNVPLWWITQATKLTRTPAALICIELLYRAWKGKSVTFPFPNADLKKLGVSRDVKRRVLRDLERGRLITVKRPPRKTPIVTLVGL*
INPhiseqgaiiFebDRAFT_10169881513300000364SoilRPAEVEAKRRKVEPFVKVPLWWIAQATKATNTGRALVCIELLYAAWKAKRPTFPLPNGRLAKLGINRETKRRALYDLERAGLIAVERPARKTPIITLVVL*
AF_2010_repII_A1DRAFT_1002706323300000597Forest SoilVKDAWLEKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAMATQSPRTTILIELLYASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL*
Ga0066388_10012484323300005332Tropical Forest SoilMQDEPWYMQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKQGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0066388_10013968133300005332Tropical Forest SoilMDVHIRRQPTPVKRKKVNAFVRVPLWWIAAATKATKTRKALVCVELLFASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG*
Ga0066388_10022384743300005332Tropical Forest SoilMQDEPWHVKRLRELEAAAPVKRKKVEPFVKVPLWWIARATQATNTGRALVCIELLHAAWKTKRLTFPLPNGRLTKLGITRYTKRRALSDLERAGLIMVKWPPRKAPVITLLGL*
Ga0066388_10063348723300005332Tropical Forest SoilMDSEPWYVKRKRELEATAPVKRKKTERFVKVPLWWVAAAAKATHTPATIVCIELLYAAWKAKTATFPLPNGRLQRLHVNRETKRRVLRALEDGGLIKVERSTRKTPIVTLLSL*
Ga0066388_10088248523300005332Tropical Forest SoilMEAEPWYLRRRRELEAAAPVKRKKTETFVKVPMWWFAAAAKATNTPRALVCIELLYASWKAGSLTFPLPNGRLKIQGVSRETKRRALADLEQAGLITVERRARKTVIVTLASL*
Ga0066388_10137836713300005332Tropical Forest SoilMSQYVIRHGRRIEVETLNPEPIKRKVQPFVKVPLWWIAEAAKHTRSPATLVLIELLHTHWKTKSLSFPFPNGRLKKLGVSREIKRRVLEELEQGGLIAVDRPTRKSPIVTLLDRL*
Ga0066388_10144486823300005332Tropical Forest SoilVKDAWLEKRLKELKAAPPNKRKKVEPFVKVPLWWITQAAKATQSPRTTILIELLYVSWKAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL*
Ga0066388_10231690523300005332Tropical Forest SoilMQDEPWHVKRLRELEAAAPVKRKKVEPFVKVPLWWIARATKATNTGKALLCIELLHAVWRTKRQTFPLPNDRLTKLGITRYTKRRALSDLEQAGLITVERPPRKTPVITVVGL*
Ga0066388_10391890323300005332Tropical Forest SoilMQDEPWHVRRRRELEAAAPVKRKKVEPFVKVPLWWIAGAAKHTRSPVTLVLVELLLASWKAKSLTFPLPNARLAKLGASRKVKRRVLLDLERGELIIVERPPRKTPVVTLVLL*
Ga0066388_10543583623300005332Tropical Forest SoilMQDEPWHVKRLRELEAAAPVKRKKVEPFVKVPLWWIIQATKATNTGRALVCIELLHAAWKTKRQTFPLPNGRLNKLGITRYTKRRALYALERAGLITVKWPSRKTPIITLVGL*
Ga0066388_10826207913300005332Tropical Forest SoilQRLTELEARAPARMKRRKVEPFVNVPLWWITQAAKFARTPAALVCIELLYRAWQSKSQTFPFPNGNLKKLGISRDIKRRVLRDLERGGLIKVERPTCKTPIVTLVGL*
Ga0070699_100004179113300005518Corn, Switchgrass And Miscanthus RhizosphereMMDNEPWHVKRRRELEAAAPVKRKKVEPFVKVPLWWIAAAARHARSPATLVMIELLQASWKAKSLSFPLPNGRLNRLGASREIKRRVLRDLEAGGLIKVERRSRKTPVVILVLL*
Ga0066905_10093811123300005713Tropical Forest SoilVKDAWLDKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAKATQSPRTTILIELLYASWKAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRNAPIVTLTLL*
Ga0066905_10224141213300005713Tropical Forest SoilVQRRRELEAAAPVKRKKIEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFLLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0066903_10058427723300005764Tropical Forest SoilMDAWVKKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAKATQSPRTTILIELLYASWKAKSLTFSLPNQRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL*
Ga0066903_10115287723300005764Tropical Forest SoilRRRELEAAAPAKRKKAEPFVKVPLWWIAAAAKATRSPATVVCIELLHASWKAKSLTFPLPNGKLQKLNVSRETKRRVLRALEQGGLIRVERPPRKTPTVTLISL*
Ga0066903_10173326723300005764Tropical Forest SoilMEEEPWHVRRKRELEAAAPIKRKKAEPFVKVPLWWIAAAAKATRSPATVICIELLHAAWKAKSPTFPLPNGRLQRLSVNRETKRRVLRRLEERGLIRVKRPPRKTPIVTLLSF*
Ga0066903_10212861213300005764Tropical Forest SoilPLWWITQAAKATQSPRTTILIELLYASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL*
Ga0066903_10221903713300005764Tropical Forest SoilMRAEKIPSTEPWYVRRRRDLEAAAPAKRKKVEPFVKVPLWWVAAAAKATRSPAAIVYVELLHVSWEKKNLTFLLPNGRLARLGASREIKRRVLRDLERAGLITVKRLAGKTPIVTIVLL*
Ga0066903_10320309933300005764Tropical Forest SoilRRYSTCSSSTGNNKLANKPERMQMRTEKIPSAEPWYVRRRRELEAAAPVKRKKVEPFVKVPLWWIAEATKATNTRKALVCIELLHAAWKAKRMTFPLPNGRLEKLGVSREAKRRALYELERAGLITVDRPTRKTPIVTLVLL*
Ga0066903_10323983623300005764Tropical Forest SoilMTDTEPWHIRRRRELEAVTPVKRKKVEAFVKVPLWWITAAAKHARSPATLVMVKLLHASWKTRSSTFSLPNNRLAKLGVSREIKRRVLRDLERNGLITVERRPSKSPIVTLVWL*
Ga0066903_10347554913300005764Tropical Forest SoilMQDEPWYVQRRRELEAAAPVKRKKIEPFIKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFLLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0066903_10547502813300005764Tropical Forest SoilLEAAAPVKRKKVEPFVKVPLWWIAAAAKHTRSPVTLVLVELLLASWKAKSLTFPLPNARLAKLGASRKVKRRVLLDLERGELIIVERPPRKTPVVTLVLL*
Ga0066903_10568618313300005764Tropical Forest SoilMDVHIKRQPTPVKRKKLDAFVRVPLWWIAAATKATKTRKALVCVELLFASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG*
Ga0066903_10680914513300005764Tropical Forest SoilMNEEPWHVRRRRELEAAAPVKRKRTEPFVKVPMWWAEAAAKAARSPATLVIIELLYLAWKTRSATFPMANLRLRQRGVSREIKRRVLRDLEHGGVISIERPSRKAPVVTLIGL*
Ga0066903_10714186213300005764Tropical Forest SoilMQDEPWYVQRRRELEAAAPVKRKRAEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQV
Ga0066903_10874216013300005764Tropical Forest SoilQRRRELEAAAPVKRKRVEPFVKVSLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL*
Ga0075365_1041787823300006038Populus EndosphereMQDEHWSVKRLRELEAAAPAKRKKVEPFVRVPLWWAAMAARHIGMPALVVVVELLYASWKAKSLTFPLPNGRLAKQGASREVKRRVLRDLERGGLITVERLPRKTPIVTLVLL*
Ga0070716_10077788413300006173Corn, Switchgrass And Miscanthus RhizosphereMQDRPWYVQRRRELEAAAPVKRKKVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTLPLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0075428_10215205113300006844Populus RhizosphereMDDESWHARRLRELEAAAPVKRKKVEPFVKVPLWWIAAATKATNTRKALVSIELLHAAWKAKSPSFPLPNGRLKRLGVSRETKRRALRDLERAGLVAIERPA
Ga0075424_10194215013300006904Populus RhizosphereLAGRKKTVEPFVKVPLWWITAATKATNNRKALVCIELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG*
Ga0111539_1286634123300009094Populus RhizosphereMDDESWHARRLRELEAAAPVKRKKVEPFVKVPLWWIAAATKATNTRKALVSIELLHAAWKAKSPSFPLPNGRLKRLGVSRETKRRALRDLERAGLVAIERPARKTAIVTLVLL*
Ga0066709_10117437713300009137Grasslands SoilMQDEPWHVKRRREIEAATPIKRKKVEPFVKVPLWWIAAAARHTRSPATLIMVELLRTSWKAKNLAFPLPNGRLEKLGVSREIKRRVLRDLERGGLIKVERRSRKTPIVTLVLL*
Ga0116217_1021830533300009700Peatlands SoilMDEEPWHVRRLRELEAAAPARRKKVEPFVKVPLWWAKQMTAATKTKKALVGIVLLHTAWKAGRQTFPLPNGRLAKLGVSRWAKNRALRDLERAGLIVVERPEHKTPIVTMVVL*
Ga0123355_1154862913300009826Termite GutMDEIPWHEQRRRELEARAPAKRKKGEPFVKMPLWWAAAAAKASRSPGMVVCVELLRAAWKANSLTFPLPNSRLAKLGASREIKRRVLRDLERAGLITVERPTRKTPVVTLIAL*
Ga0126380_1173250613300010043Tropical Forest SoilMHAPVKRKKKVEPFVKVPLWWITQAAKATQSPRTTILIELLYASWKAKSLTFSLPNQRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL*
Ga0126373_1277791213300010048Tropical Forest SoilFQREVVATKLAGRKKTVEPFVKVPLWWITAATKATNNRKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0126378_1044954523300010361Tropical Forest SoilMDVHIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG*
Ga0126378_1141033313300010361Tropical Forest SoilNRLQGGGLMQDEPWHVQRRRELEAAAPVKRKKIEPFVKVPLWWITAATKATNNHKALVCIELLYASWKATSLTFLLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0126379_1048407123300010366Tropical Forest SoilMQDEPWYVQRRRELEAAAPVKRKKIEPFIKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL*
Ga0126383_1104316523300010398Tropical Forest SoilMQDEPWYVQRRRELEAAAPVKRKKIEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFLLPNARLQKRGITRETKRRALRDLERDELIIVERPSRKTPIVTLILL*
Ga0126383_1326525223300010398Tropical Forest SoilVKDAWLEKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAMATQSPRTTILIELLYASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERKGPGKR
Ga0132258_1198399823300015371Arabidopsis RhizosphereMQDEPWHVKRRRELEAAAPAKRKKVEPFVRVPLWWATMAARHMGMPALVVVVELLYASWKAKSPTFPLPNGRLAKQGASREVKRRVLRDLERGGLITVERSSRKTPVVTLVLL*
Ga0132256_10260024513300015372Arabidopsis RhizosphereMDDESWHARRLRELEAAAPVKRKKVEPFVKVPLWWIAAATKATNTRKALVSIELLHAAWKAKSPSFPLPNGRLKRLGVSRETKRRALRDLERAGLVAIE
Ga0182036_1054000723300016270SoilMDAWVEKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAMATKSPRTTILIELLHASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0182036_1091561223300016270SoilPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLIGL
Ga0182036_1188789613300016270SoilMQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTL
Ga0182041_1087600923300016294SoilMDASAERRQSELEEAAAKKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGGLITVERSTRKTPIVTLVGL
Ga0182041_1172097923300016294SoilMDPWIKQRLTELKSAAPGQRRKQKAQPFVHVPLWWIAQAAKFTRTPAALVCIELLYRAWKAKSMTFPFPNADLKKLGVSRDVKRRVLRDLERGGLITVERPT
Ga0182033_1097376023300016319SoilMDAWVEKRLKELKAAPPRKRKKVEPFVKVPLWWITEAAKATQSPRTTILTELLYASWKAKSLTFPLPNRRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0182033_1155507723300016319SoilMDAWVKRRLIELEAPGRRKRKKVEPFVHVPLWWITQATKLARTPAALVCIELLYRSWKAKSLTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0182033_1171253823300016319SoilMDALAERRQSESEEEAPKKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPVPNGNLKKLGVSRDIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0182033_1203451023300016319SoilMDDEPWHVKRRRELEPAPPIKRRKKGEPFVKVPLWWIAQATRATNTDKALVCIELLYAAWKAKRLTFSLPNGRLAKLGVTRETKRRALCDLERAGLITVER
Ga0182035_1066804613300016341SoilEDMGPSPRAPGRARDAEGVVKDAWLEKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAMATKSPRTTILIELLHASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0182032_1065068713300016357SoilRAAAGAHQGARVVDASAERRQSELEEAAPKKKRKEPFVKVPLWWIQQAATITKSSTAMVCIELLYRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGRLITVERPTRKTPIVTLVGL
Ga0182034_1020689813300016371SoilVNASAERRQSELEEAAPKKRRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLEKGGLITVERPTRKTPIVTLVGL
Ga0182034_1068825123300016371SoilMDAWVKRRLTELEAAAPARRKRKKIEPFVHVPLWWITQATKLARTPAALVCIELLYRSWKAKSPTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0182034_1072322213300016371SoilMDPWIKQRLTELKAAAPGQRRKRKAQPFVHVPLWWIAQATKFTRTPAALVCIELLYRAWKAKSLTFPFPNADLKKLGVSRDIKRRVLRDLERGGLIT
Ga0182034_1080836323300016371SoilMDASAERRQSELEEAAAKKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSRTFPLPNGTLRKMGVSREIKRRVLRDLERGGLI
Ga0182037_1181894613300016404SoilMDEPWYVQRRRELEAAAPIKRRKVEPFVKVPLWWIAAATKATNTRKALVSIELLHAAWKAKSLTFPVPNGRLKKLGVSRETKRRALHDLERAGLITTERPARKTTIITLVLL
Ga0182039_1003700723300016422SoilMQDEPWHVKRLRELGAARADKRKKVEPFVKVLLWWIARATKATNTGRALVCIELLHAAWKAKRPTFPLPNGRLARLGLHRRTKYRALCDLERAGLITIERPPRKTPIITLVGL
Ga0182039_1057219613300016422SoilEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLIGL
Ga0182039_1137812813300016422SoilVNASAERRQSELEEAAPKKRRKVEPFVKVPLWWIQQAATITKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLEKGGLITVER
Ga0182039_1167757313300016422SoilMDASGQSELEEAAPKKKRKVEPFVNVPLWWITQATKLTRTPAALVCIELLYRSWKAKSPTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0182038_1002902613300016445SoilMQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKQGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL
Ga0182038_1077000513300016445SoilVDTSAERRQSELEEAAPKKRRKVEPFVKVPLWWIQQAATITKSSTTLVCIELLHRSWKAKSRTFPLPNGTLRKMGVSREIKRRVLRDLERGGLITVER
Ga0187802_1001674523300017822Freshwater SedimentMTAKSKKDAFVKMPLWFATEAAKATKTLKALVWVELLYRSWKAKSLTFPLPNGRLKKVGVSREAKRRALRDLEAAGLIRVERPSRKTIRVTLVVL
Ga0190271_1381293213300018481SoilLNAAAPTKRRRAVEPFVKVPLWWTTAAAKATRDPGMLVCIELLRASWKAKGPTFPLPNRKLGKLGASRDVKRRVLLDLERAGLISVERHPRKTPIVTLVSL
Ga0207862_115530913300027703Tropical Forest SoilMDALAERRRFELEEAAPKKKRNVEPFVKVPLWWIQQAATITKSSTTLVCIELLYRSWKAKSPTFPLPNKNLRKLGVSREIKRRVLRDLERGGLITV
Ga0310037_1020077123300030494Peatlands SoilMDEEPWHVRRLRELEAAAPARRKKVEPFVKVPLWWAKQMTAATKTKKALVGIVLLHTAWKAGRQTFPLPNGRLAKLGVSRWAKNRALRDLERAGLIVVERPEH
Ga0318541_1000713053300031545SoilMQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL
Ga0318538_1072941813300031546SoilVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL
Ga0318528_1045954423300031561SoilMDVRINRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG
Ga0310915_1018643413300031573SoilMDVHIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG
Ga0318501_1068544213300031736SoilAAAPVKRKRVEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLIGL
Ga0306918_1024812823300031744SoilMDVRIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG
Ga0306918_1074043323300031744SoilLAERRQSESEEEAPKKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLEKGGLITVE
Ga0318492_1076332223300031748SoilMDDEPWHVKRRRELEPAPPIKRRKKGEPFVKVPLWWIAQATRATNTDKALVCIELLYAAWKAKRLTFSLPNGRLAKLGVTRETKRRALC
Ga0318509_1031356023300031768SoilMDVHIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSL
Ga0318546_1098764913300031771SoilAPGSRGQGGRLMQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL
Ga0318503_1029262223300031794SoilMEEEPWHVRRKRELEAAAPIKRKKAEPFVKVPLWWIAAAAKATRSPATVVCIELLHAAWKAKSPTFPLPNGRLQRLGVNRETKRRILRTLEEGGLI
Ga0318576_1028046013300031796SoilMQDEPWYVQRRRELEAAAPVKRKKIEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLI
Ga0318517_1039155623300031835SoilIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVSLIAVSG
Ga0318495_1028153613300031860SoilMQDEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLI
Ga0306919_1022019123300031879SoilMDVRIKRQPTPVKRKKVDAFVRVPLWWIAAATKATKTRKALVCVELLYASWKAKSSTFPLPNGRLKKLGVSREAKRRALRDLERAGLITVERPTRKTPIVS
Ga0306919_1097966223300031879SoilAVAANKTAGRRKKKAEPFVMVPLWWIAAATKATKTRKALVCVELLYAAWKAKSSTFPLPNGRLKKLGVGREAKRRALQDLERAGLITVERPTRKTLIVSLIAVSG
Ga0306919_1139063523300031879SoilMDAWVEKRLKELKAALPRKRKKVEPFVKVPLWWITEAAKATQSPRTTILTELLYASWKAKSLTFPLPNRRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0306925_1059271113300031890SoilVKDAWLEKRLKELKAAPPRKRKKVEPFVKVPLWWITEAAKATQSPRTTILTELLYASWKAKSLTFPLPNRRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0306925_1115828823300031890SoilMDALAERRQSESEEEAPKKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0306923_1000755213300031910SoilMQDEPWHVKRLRELEAAAPVKRKKVEPFVKVLLWWIARATKATNTGRALVCIELLHAAWKAKRPTFPLPNGRLARLGLHRRTKYRALCDLERAGLITIERPPRKTPIITLVGL
Ga0306923_1022617353300031910SoilMQDEPWYVQRRRELEAAAPVKRKRVEPFVQVPLWWIAIAAKATRSPATVVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLIGL
Ga0306923_1070560023300031910SoilMKKRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLYRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGGLITVERPIRKTPIVTLVGL
Ga0310912_1078956213300031941SoilLEAPGRRKRKKVEPFVHVPLWWITQATKLARTPAALVCIELLYRSWKAKSPTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPPRKTPIVTLVGL
Ga0310916_1088219713300031942SoilAAPKKRRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0310916_1171877723300031942SoilVKDAWLEKRLKELKAAPPRKRKKVEPFVKVPLWWITQAAMATKSPRTTILIELLHASWRAKSLTFALPNQRLKRRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0310913_1063040323300031945SoilMDAWVEKRLKELKAALPRKRKKVEPFVKVPLWWITEAAKATQSPRTTILTELLYASWKAKSLTFPLPNQRLKQRGASREIKRLVLRDLERARLITVERRPRKAPIVTLTLL
Ga0310909_1050183423300031947SoilMEEEPWHVRRKRELEAAAPIKRKKAEPFVKVPLWWIAAAAKATRSPATVVCIELLHAAWKAKSPTFPLPNGRLQRLSVNRETKRRVLRTLEEAGLI
Ga0310909_1066176113300031947SoilMQDEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWIAISAKATRSPATIVLIELLYACWKAKNSTFPLPNDRLKKRGVSRDVKRRVLRDLERRQVIIVERPPRKTPIVTLIGL
Ga0306926_1009664753300031954SoilMQDEPWYVQRRRELEAAAPVKRKKIEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFLLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL
Ga0306926_1224334723300031954SoilMDAWVKRRLTELEAAAPGRRKRKKVEPFVHVPLWWITQATKLARTPAALVCIELLYRSWKAKSPTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0310911_1075394713300032035SoilVVATKLAGRKKTVEPFVKVPLWWITAATKATNNRKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL
Ga0318514_1044189823300032066SoilMQDEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDG
Ga0306924_1119836313300032076SoilVDTSAERRQSELEEAAPKKRRKVEPFVKVPLWWIQQAATTTKSSTTLVCIELLHRSWKAKSPTFPLPNGNLRKLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0311301_10058675113300032160Peatlands SoilMDEEPWHVRRLRELEAAAPARRKKVEPFVKVPLWWAKQMTAATKTKKALVGIVLLHTAWKAGRQTFPLPNGRLAKLGVSRWAKNRALRDLERAGLIVVERPEHKTPIVTMVVL
Ga0306920_10098774613300032261SoilATKLAGRKKTVEPFVKVPLWWITAATKATNNRKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERGGLIIVERPSRKTPIVTLILL
Ga0306920_10148456013300032261SoilMDEEPWHVRRRRELEAAAPIKRKRPEPFVKVPLWWIAAAAKATRSPATIVCIELLHASWKAKNSTFPLPNGRLAKLGVSREIKRRCLRDLERAGLISVERPAR
Ga0306920_10264648513300032261SoilMDAWVKRRLIELEAPGRRKRKKVEPFVHVPLWWITQATKLARTPAALVCIELLYRSWKAKSSTFPFSNENLKRLGVSREIKRRVLRDLERGGLITVERPTRKTPIVTLVGL
Ga0310914_1117571423300033289SoilMDDEPWQVRRRRELEAAAPAKRKKTEPFVKVPFWFAVSAARATRSPAMIVCVELLRASWKARSATFPVANIRLGELGVGREVKRRVLRDLERAGLVTVERPLRRAPIVTLLGL
Ga0318519_1085219113300033290SoilGQGGRLMQNEPWYVQRRRELEAAAPVKRKRVEPFVKVPLWWITAATKATNNHKALVCIELLYASWKAKSLTFPLPNARLQKRGITRETKRRALRDLERDGLIIVERPSRKTPIVTLILL


 ⦗Top⦘


© Pavlopoulos Lab, Bioinformatics & Integrative Biology | B.S.R.C. "Alexander Fleming" | Privacy Notice
Make sure JavaScript is enabled in your browser settings to achieve functionality.