NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters
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Metagenome / Metatranscriptome Family F083130

Metagenome / Metatranscriptome Family F083130

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Overview Alignments Structure & Topology Gene Neighborhood Phylogeny Ecosystems Sequences
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Overview

Basic Information
Family ID F083130
Family Type Metagenome / Metatranscriptome
Number of Sequences 113
Average Sequence Length 73 residues
Representative Sequence MSRRAWLQILMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRKKFGSA
Number of Associated Samples 85
Number of Associated Scaffolds 113

Quality Assessment
Transcriptomic Evidence Yes
Most common taxonomic group Bacteria
% of genes with valid RBS motifs 63.72 %
% of genes near scaffold ends (potentially truncated) 41.59 %
% of genes from short scaffolds (< 2000 bps) 84.07 %
Associated GOLD sequencing projects 74
AlphaFold2 3D model prediction Yes
3D model pTM-score0.39

Note: High quality evidence is represented by blue. Low quality evidence is represented by red.
Hidden Markov Model
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Most Common Taxonomy
Group Bacteria (76.991 % of family members)
NCBI Taxonomy ID 2
Taxonomy All Organisms → cellular organisms → Bacteria

Most Common Ecosystem
GOLD Ecosystem Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil
(11.504 % of family members)
Environment Ontology (ENVO) Unclassified
(26.549 % of family members)
Earth Microbiome Project Ontology (EMPO) Host-associated → Plant → Plant rhizosphere
(47.788 % of family members)


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Multiple Sequence Alignments

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Structure & Topology

Predicted Secondary Structure and Topology

Predicted Topology & Secondary Structure
Classification: Transmembrane (alpha-helical) Signal Peptide: Yes Secondary Structure distribution: α-helix: 49.02%    β-sheet: 0.00%    Coil/Unstructured: 50.98%
Feature Viewer
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Predicted 3D Structure

Structure Viewer
Per-residue confidence (pLDDT):
  0-50   51-70   71-90   91-100  		pTM-score: 0.39
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Low Quality Model:

This family has a low confidence model (pTM < 0.7) and has not been screened against SCOPe or PDB.

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Gene Neighborhood

Neighboring Pfam domains

Pfam IDName % Frequency in 113 Family Scaffolds
PF00563EAL 50.44
PF00072Response_reg 16.81
PF00990GGDEF 14.16
PF00158Sigma54_activat 7.96
PF02563Poly_export 0.88
PF02706Wzz 0.88

Neighboring Clusters of Orthologous Genes (COGs)

COG IDNameFunctional Category % Frequency in 113 Family Scaffolds
COG2200EAL domain, c-di-GMP-specific phosphodiesterase class I (or its enzymatically inactive variant)Signal transduction mechanisms [T] 50.44
COG3434c-di-GMP phosphodiesterase YuxH/PdeH, contains EAL and HDOD domainsSignal transduction mechanisms [T] 50.44
COG4943Redox-sensing c-di-GMP phosphodiesterase, contains CSS-motif and EAL domainsSignal transduction mechanisms [T] 50.44
COG5001Cyclic di-GMP metabolism protein, combines GGDEF and EAL domains with a 6TM membrane domainSignal transduction mechanisms [T] 50.44
COG1596Periplasmic protein Wza involved in polysaccharide export, contains SLBB domain of the beta-grasp foldCell wall/membrane/envelope biogenesis [M] 0.88
COG3206Exopolysaccharide export protein/domain GumC/Wzc1Cell wall/membrane/envelope biogenesis [M] 0.88
COG3524Capsule polysaccharide export protein KpsE/RkpRCell wall/membrane/envelope biogenesis [M] 0.88
COG3765LPS O-antigen chain length determinant protein, WzzB/FepE familyCell wall/membrane/envelope biogenesis [M] 0.88
COG3944Capsular polysaccharide biosynthesis protein YveKCell wall/membrane/envelope biogenesis [M] 0.88

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Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:
NameRankTaxonomyDistribution
All OrganismsrootAll Organisms76.99 %
UnclassifiedrootN/A23.01 %

Visualization
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Associated Scaffolds


ScaffoldTaxonomyLengthIMG/M Link
3300003321|soilH1_10114187All Organisms → cellular organisms → Bacteria3911Open in IMG/M
3300004633|Ga0066395_10044052All Organisms → cellular organisms → Bacteria1941Open in IMG/M
3300004633|Ga0066395_10228414All Organisms → cellular organisms → Bacteria988Open in IMG/M
3300004799|Ga0058863_11260522All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria → Burkholderiales → Oxalobacteraceae518Open in IMG/M
3300005166|Ga0066674_10261340All Organisms → cellular organisms → Bacteria819Open in IMG/M
3300005329|Ga0070683_100083769All Organisms → cellular organisms → Bacteria2987Open in IMG/M
3300005329|Ga0070683_100097604All Organisms → cellular organisms → Bacteria → Proteobacteria2764Open in IMG/M
3300005332|Ga0066388_101193570All Organisms → cellular organisms → Bacteria1300Open in IMG/M
3300005332|Ga0066388_101273809All Organisms → cellular organisms → Bacteria1264Open in IMG/M
3300005332|Ga0066388_106240284Not Available602Open in IMG/M
3300005332|Ga0066388_106618506All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae584Open in IMG/M
3300005336|Ga0070680_100547942All Organisms → cellular organisms → Bacteria991Open in IMG/M
3300005434|Ga0070709_11447042Not Available557Open in IMG/M
3300005436|Ga0070713_100507197All Organisms → cellular organisms → Bacteria1139Open in IMG/M
3300005439|Ga0070711_100976522All Organisms → cellular organisms → Bacteria726Open in IMG/M
3300005458|Ga0070681_10326544All Organisms → cellular organisms → Bacteria1444Open in IMG/M
3300005458|Ga0070681_10524383All Organisms → cellular organisms → Bacteria1098Open in IMG/M
3300005526|Ga0073909_10002827All Organisms → cellular organisms → Bacteria → Proteobacteria5126Open in IMG/M
3300005526|Ga0073909_10072822All Organisms → cellular organisms → Bacteria → Proteobacteria1302Open in IMG/M
3300005535|Ga0070684_100611828All Organisms → cellular organisms → Bacteria1013Open in IMG/M
3300005547|Ga0070693_100122994All Organisms → cellular organisms → Bacteria → Proteobacteria1612Open in IMG/M
3300005547|Ga0070693_100406120All Organisms → cellular organisms → Bacteria946Open in IMG/M
3300005578|Ga0068854_101471679Not Available617Open in IMG/M
3300005615|Ga0070702_100100645All Organisms → cellular organisms → Bacteria1772Open in IMG/M
3300005616|Ga0068852_100778039All Organisms → cellular organisms → Bacteria → Proteobacteria970Open in IMG/M
3300006031|Ga0066651_10159467All Organisms → cellular organisms → Bacteria1185Open in IMG/M
3300006031|Ga0066651_10647276All Organisms → cellular organisms → Bacteria → Proteobacteria → Betaproteobacteria564Open in IMG/M
3300006046|Ga0066652_101391915Not Available657Open in IMG/M
3300006173|Ga0070716_101024573Not Available654Open in IMG/M
3300006237|Ga0097621_100021557All Organisms → cellular organisms → Bacteria4987Open in IMG/M
3300006638|Ga0075522_10017237All Organisms → cellular organisms → Bacteria4615Open in IMG/M
3300006854|Ga0075425_100079809All Organisms → cellular organisms → Bacteria3698Open in IMG/M
3300006871|Ga0075434_100241355Not Available1827Open in IMG/M
3300006954|Ga0079219_10440925All Organisms → cellular organisms → Bacteria884Open in IMG/M
3300009176|Ga0105242_12697244Not Available547Open in IMG/M
3300009792|Ga0126374_11901017Not Available500Open in IMG/M
3300010043|Ga0126380_10205965All Organisms → cellular organisms → Bacteria1322Open in IMG/M
3300010043|Ga0126380_11203476All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium653Open in IMG/M
3300010358|Ga0126370_10703719All Organisms → cellular organisms → Bacteria888Open in IMG/M
3300010358|Ga0126370_11321068Not Available677Open in IMG/M
3300010360|Ga0126372_10135513All Organisms → cellular organisms → Bacteria1935Open in IMG/M
3300010360|Ga0126372_11879694All Organisms → cellular organisms → Bacteria643Open in IMG/M
3300010361|Ga0126378_10511460All Organisms → cellular organisms → Bacteria1316Open in IMG/M
3300010361|Ga0126378_10884942Not Available1000Open in IMG/M
3300010362|Ga0126377_13075198Not Available539Open in IMG/M
3300010373|Ga0134128_11701550All Organisms → cellular organisms → Bacteria694Open in IMG/M
3300010397|Ga0134124_11894113All Organisms → cellular organisms → Bacteria632Open in IMG/M
3300010398|Ga0126383_10059149All Organisms → cellular organisms → Bacteria3238Open in IMG/M
3300010398|Ga0126383_11626155Not Available735Open in IMG/M
3300010400|Ga0134122_10061726All Organisms → cellular organisms → Bacteria2895Open in IMG/M
3300010400|Ga0134122_10068036All Organisms → cellular organisms → Bacteria2763Open in IMG/M
3300010403|Ga0134123_10006948All Organisms → cellular organisms → Bacteria7553Open in IMG/M
3300011119|Ga0105246_12319439All Organisms → cellular organisms → Bacteria525Open in IMG/M
3300012208|Ga0137376_10136689All Organisms → cellular organisms → Bacteria → Proteobacteria2102Open in IMG/M
3300012212|Ga0150985_102261968All Organisms → cellular organisms → Bacteria934Open in IMG/M
3300012212|Ga0150985_104370112Not Available802Open in IMG/M
3300012212|Ga0150985_120280710All Organisms → cellular organisms → Bacteria538Open in IMG/M
3300012212|Ga0150985_122842152All Organisms → cellular organisms → Bacteria509Open in IMG/M
3300012469|Ga0150984_100032359All Organisms → cellular organisms → Bacteria1212Open in IMG/M
3300012469|Ga0150984_110458681All Organisms → cellular organisms → Bacteria1064Open in IMG/M
3300012469|Ga0150984_116027125All Organisms → cellular organisms → Bacteria1075Open in IMG/M
3300012960|Ga0164301_10552210All Organisms → cellular organisms → Bacteria841Open in IMG/M
3300012971|Ga0126369_11331609Not Available808Open in IMG/M
3300013296|Ga0157374_10013749All Organisms → cellular organisms → Bacteria → Proteobacteria7070Open in IMG/M
3300014969|Ga0157376_10813668All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300014969|Ga0157376_11248853All Organisms → cellular organisms → Bacteria772Open in IMG/M
3300015371|Ga0132258_11000963All Organisms → cellular organisms → Bacteria2112Open in IMG/M
3300015371|Ga0132258_13190410All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes1131Open in IMG/M
3300015371|Ga0132258_13791076All Organisms → cellular organisms → Bacteria1030Open in IMG/M
3300015373|Ga0132257_101231728All Organisms → cellular organisms → Bacteria948Open in IMG/M
3300015374|Ga0132255_105837003All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Peribacillus → Peribacillus saganii521Open in IMG/M
3300015374|Ga0132255_105927640All Organisms → cellular organisms → Bacteria517Open in IMG/M
3300016294|Ga0182041_11533577All Organisms → cellular organisms → Bacteria614Open in IMG/M
3300016357|Ga0182032_11195479Not Available654Open in IMG/M
3300018468|Ga0066662_11643498All Organisms → cellular organisms → Bacteria671Open in IMG/M
3300018482|Ga0066669_10813106All Organisms → cellular organisms → Bacteria829Open in IMG/M
3300020070|Ga0206356_11104369All Organisms → cellular organisms → Bacteria → Terrabacteria group → Firmicutes → Bacilli → Bacillales → Bacillaceae → Peribacillus → Peribacillus saganii510Open in IMG/M
3300020082|Ga0206353_11939316All Organisms → cellular organisms → Bacteria → Calditrichaeota → Calditrichia → Calditrichales → unclassified Calditrichales → Calditrichales bacterium509Open in IMG/M
3300021384|Ga0213876_10121772All Organisms → cellular organisms → Bacteria1385Open in IMG/M
3300024290|Ga0247667_1092915All Organisms → cellular organisms → Bacteria555Open in IMG/M
3300025899|Ga0207642_10549824Not Available713Open in IMG/M
3300025905|Ga0207685_10411184All Organisms → cellular organisms → Bacteria695Open in IMG/M
3300025906|Ga0207699_11007186Not Available616Open in IMG/M
3300025912|Ga0207707_10450840All Organisms → cellular organisms → Bacteria1101Open in IMG/M
3300025912|Ga0207707_10647704Not Available891Open in IMG/M
3300025917|Ga0207660_10879088All Organisms → cellular organisms → Bacteria731Open in IMG/M
3300025928|Ga0207700_10713509All Organisms → cellular organisms → Bacteria895Open in IMG/M
3300025928|Ga0207700_11779317Not Available542Open in IMG/M
3300025934|Ga0207686_10882469All Organisms → cellular organisms → Bacteria721Open in IMG/M
3300025939|Ga0207665_10992351All Organisms → cellular organisms → Bacteria668Open in IMG/M
3300025944|Ga0207661_10113205All Organisms → cellular organisms → Bacteria → Proteobacteria2299Open in IMG/M
3300025981|Ga0207640_11446296Not Available617Open in IMG/M
3300026142|Ga0207698_10638498All Organisms → cellular organisms → Bacteria1053Open in IMG/M
3300027874|Ga0209465_10047044All Organisms → cellular organisms → Bacteria → Proteobacteria2059Open in IMG/M
3300028800|Ga0265338_11229608All Organisms → cellular organisms → Bacteria502Open in IMG/M
3300031058|Ga0308189_10059213All Organisms → cellular organisms → Bacteria1093Open in IMG/M
3300031093|Ga0308197_10359454All Organisms → cellular organisms → Bacteria557Open in IMG/M
3300031226|Ga0307497_10760897Not Available505Open in IMG/M
3300031366|Ga0307506_10293287Not Available634Open in IMG/M
3300031545|Ga0318541_10638478All Organisms → cellular organisms → Bacteria595Open in IMG/M
3300031720|Ga0307469_11531401All Organisms → cellular organisms → Bacteria → Proteobacteria → Gammaproteobacteria → Chromatiales → unclassified Chromatiales → Chromatiales bacterium639Open in IMG/M
3300031720|Ga0307469_11611847All Organisms → cellular organisms → Bacteria624Open in IMG/M
3300031740|Ga0307468_100358267All Organisms → cellular organisms → Bacteria → Proteobacteria1092Open in IMG/M
3300031879|Ga0306919_10922373All Organisms → cellular organisms → Bacteria669Open in IMG/M
3300031912|Ga0306921_10389600All Organisms → cellular organisms → Bacteria1627Open in IMG/M
3300031939|Ga0308174_10317168All Organisms → cellular organisms → Bacteria1234Open in IMG/M
3300031942|Ga0310916_11495684Not Available551Open in IMG/M
3300032074|Ga0308173_11388002All Organisms → cellular organisms → Bacteria → Proteobacteria → Alphaproteobacteria → Hyphomicrobiales659Open in IMG/M
3300032205|Ga0307472_101339214Not Available691Open in IMG/M
3300032261|Ga0306920_101884407Not Available841Open in IMG/M
3300032770|Ga0335085_10151465All Organisms → cellular organisms → Bacteria2909Open in IMG/M
3300032770|Ga0335085_12412531Not Available524Open in IMG/M
3300032783|Ga0335079_10135528All Organisms → cellular organisms → Bacteria2772Open in IMG/M


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Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:
HabitatTaxonomyDistribution
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil11.50%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere10.62%
Corn RhizosphereEnvironmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn Rhizosphere8.85%
Tropical Forest SoilEnvironmental → Terrestrial → Soil → Loam → Forest Soil → Tropical Forest Soil6.19%
Arabidopsis RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Arabidopsis Rhizosphere5.31%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Soil4.42%
Terrestrial SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Terrestrial Soil4.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil4.42%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Soil3.54%
Hardwood Forest SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil3.54%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizoplane → Unclassified → Unclassified → Avena Fatua Rhizosphere3.54%
Corn RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Corn Rhizosphere3.54%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil2.65%
SoilEnvironmental → Terrestrial → Soil → Wetlands → Unclassified → Soil2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
Miscanthus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Miscanthus Rhizosphere2.65%
Avena Fatua RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Avena Fatua Rhizosphere2.65%
Surface SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Surface Soil1.77%
Corn, Switchgrass And Miscanthus RhizosphereEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Corn, Switchgrass And Miscanthus Rhizosphere1.77%
Grasslands SoilEnvironmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil1.77%
SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural → Soil1.77%
Populus RhizosphereHost-Associated → Plants → Rhizosphere → Unclassified → Unclassified → Populus Rhizosphere1.77%
Vadose Zone SoilEnvironmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil0.89%
Agricultural SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Agricultural Soil0.89%
Sugarcane Root And Bulk SoilEnvironmental → Terrestrial → Soil → Unclassified → Agricultural Land → Sugarcane Root And Bulk Soil0.89%
Arctic Peat SoilEnvironmental → Terrestrial → Soil → Unclassified → Permafrost → Arctic Peat Soil0.89%
Host-AssociatedHost-Associated → Human → Digestive System → Large Intestine → Fecal → Host-Associated0.89%
Miscanthus RhizosphereHost-Associated → Plants → Rhizoplane → Epiphytes → Unclassified → Miscanthus Rhizosphere0.89%
Miscanthus RhizosphereHost-Associated → Plants → Roots → Rhizosphere → Soil → Miscanthus Rhizosphere0.89%
Plant RootsHost-Associated → Plants → Roots → Unclassified → Unclassified → Plant Roots0.89%
RhizosphereHost-Associated → Plants → Rhizosphere → Soil → Unclassified → Rhizosphere0.89%

Visualization
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Associated Samples

Taxon OIDSample NameHabitat TypeIMG/M Link
3300003321Sugarcane bulk soil Sample H1EnvironmentalOpen in IMG/M
3300004633Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBioEnvironmentalOpen in IMG/M
3300004799Switchgrass rhizosphere and bulk soil microbial communities from Kellogg Biological Station, Michigan, USA for expression studies - soil CB-3 (Metagenome Metatranscriptome)Host-AssociatedOpen in IMG/M
3300005166Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_123EnvironmentalOpen in IMG/M
3300005329Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaGEnvironmentalOpen in IMG/M
3300005332Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil - Plot 6 (Hybrid Assembly)EnvironmentalOpen in IMG/M
3300005336Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaGEnvironmentalOpen in IMG/M
3300005434Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaGEnvironmentalOpen in IMG/M
3300005436Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaGEnvironmentalOpen in IMG/M
3300005439Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-3 metaGEnvironmentalOpen in IMG/M
3300005458Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaGEnvironmentalOpen in IMG/M
3300005526Surface soil microbial communities from Centralia Pennsylvania, which are recovering from an underground coalmine fire. - Coalmine Soil_Cen17_06102014_R1EnvironmentalOpen in IMG/M
3300005535Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.2-3L metaGEnvironmentalOpen in IMG/M
3300005547Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K1-10-3 metaGEnvironmentalOpen in IMG/M
3300005578Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2Host-AssociatedOpen in IMG/M
3300005615Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-10-3 metaGEnvironmentalOpen in IMG/M
3300005616Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2Host-AssociatedOpen in IMG/M
3300006031Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Angelo_100EnvironmentalOpen in IMG/M
3300006046Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_101EnvironmentalOpen in IMG/M
3300006173Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaGEnvironmentalOpen in IMG/M
3300006237Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M7-2 (version 2)Host-AssociatedOpen in IMG/M
3300006638Arctic peat soil microbial communities from the Barrow Environmental Observatory site, Barrow, Alaska, USA - NGEE PermafrostL2-AEnvironmentalOpen in IMG/M
3300006854Populus root and rhizosphere microbial communities from Tennessee, USA - Soil MetaG P. TD hybrid SBSTD4Host-AssociatedOpen in IMG/M
3300006871Populus root and rhizosphere microbial communities from Tennessee, USA - Rhizosphere MetaG P. TD hybrid SRZTD3Host-AssociatedOpen in IMG/M
3300006954Agricultural soil microbial communities from Georgia to study Nitrogen management - GA ControlEnvironmentalOpen in IMG/M
3300009176Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaGHost-AssociatedOpen in IMG/M
3300009792Tropical forest soil microbial communities from Panama - MetaG Plot_12EnvironmentalOpen in IMG/M
3300010043Tropical forest soil microbial communities from Panama - MetaG Plot_26EnvironmentalOpen in IMG/M
3300010358Tropical forest soil microbial communities from Panama - MetaG Plot_3EnvironmentalOpen in IMG/M
3300010360Tropical forest soil microbial communities from Panama - MetaG Plot_6EnvironmentalOpen in IMG/M
3300010361Tropical forest soil microbial communities from Panama - MetaG Plot_23EnvironmentalOpen in IMG/M
3300010362Tropical forest soil microbial communities from Panama - MetaG Plot_22EnvironmentalOpen in IMG/M
3300010373Terrestrial soil microbial communities with excess Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-175-4EnvironmentalOpen in IMG/M
3300010397Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-4EnvironmentalOpen in IMG/M
3300010398Tropical forest soil microbial communities from Panama - MetaG Plot_35EnvironmentalOpen in IMG/M
3300010400Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-2EnvironmentalOpen in IMG/M
3300010403Terrestrial soil microbial communities without Nitrogen fertilizer from Kellogg Biological Station, Michigan, USA - KB3-0-3EnvironmentalOpen in IMG/M
3300011119Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M6-4 metaGHost-AssociatedOpen in IMG/M
3300012208Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_20_16 metaGEnvironmentalOpen in IMG/M
3300012212Combined assembly of Hopland grassland soilHost-AssociatedOpen in IMG/M
3300012469Combined assembly of Soil carbon rhizosphereHost-AssociatedOpen in IMG/M
3300012960Unamended control soil microbial communities from upstate New York, USA - Whitman soil sample_231_MGEnvironmentalOpen in IMG/M
3300012971Tropical forest soil microbial communities from Panama - MetaG Plot_1EnvironmentalOpen in IMG/M
3300013296Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M2-5 metaGHost-AssociatedOpen in IMG/M
3300014969Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - M4-5 metaGHost-AssociatedOpen in IMG/M
3300015371Combined assembly of cpr5 and col0 rhizosphere and soilHost-AssociatedOpen in IMG/M
3300015373Combined assembly of cpr5 rhizosphereHost-AssociatedOpen in IMG/M
3300015374Col-0 rhizosphere combined assemblyHost-AssociatedOpen in IMG/M
3300016294Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux8day.12C.oxic.44.000.178EnvironmentalOpen in IMG/M
3300016357Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - timezero.00C.oxic.00.000.000EnvironmentalOpen in IMG/M
3300018468Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111EnvironmentalOpen in IMG/M
3300018482Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118EnvironmentalOpen in IMG/M
3300020070Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-1 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300020082Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - Diel MetaT C5am-4 (Metagenome Metatranscriptome) (v2)EnvironmentalOpen in IMG/M
3300021384Root-associated microbial communities from Barbacenia macrantha in rupestrian grasslands, the National Park of Serra do Cipo, Brazil - RX_R9Host-AssociatedOpen in IMG/M
3300024290Soil microbial communities from Purdue University Martell Research Forest, Indiana, United States - CNK08EnvironmentalOpen in IMG/M
3300025899Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Miscanthus M2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300025905Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025906Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L5-1 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025912Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C8-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025917Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7-3B metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025928Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L8-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025934Miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS M2-4 metaG (SPAdes)Host-AssociatedOpen in IMG/M
3300025939Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025944Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS C7.1-3L metaG (SPAdes)EnvironmentalOpen in IMG/M
3300025981Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C4-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300026142Corn rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS Corn C2-2 (SPAdes)Host-AssociatedOpen in IMG/M
3300027874Tropical forest soil microbial communities from Panama analyzed to predict greenhouse gas emissions - Panama Soil Plot 1 MoBio (SPAdes)EnvironmentalOpen in IMG/M
3300028800Rhizosphere microbial communities from Carex aquatilis grown in University of Washington, Seatle, WA, United States - 4-21-26 metaGHost-AssociatedOpen in IMG/M
3300031058Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_184 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031093Metatranscriptome of soil microbial communities from the East River watershed near Crested Butte, Colorado, United States - ER_RNA_198 (Metagenome Metatranscriptome)EnvironmentalOpen in IMG/M
3300031226Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 10_SEnvironmentalOpen in IMG/M
3300031366Soil microbial communities from Populus trichocarpa stands in riparian zone in the Pacific Northwest, United States - 25_SEnvironmentalOpen in IMG/M
3300031545Tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.SIPMG.166b4f26EnvironmentalOpen in IMG/M
3300031720Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM2C_515EnvironmentalOpen in IMG/M
3300031740Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gases AM2C_05EnvironmentalOpen in IMG/M
3300031879Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.172 (v2)EnvironmentalOpen in IMG/M
3300031912Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - statoxic.12C.oxic.44.000.080 (v2)EnvironmentalOpen in IMG/M
3300031939Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R2EnvironmentalOpen in IMG/M
3300031942Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - GRE.bulkMG.LF176EnvironmentalOpen in IMG/M
3300032074Soil microbial communities from UC Gill Tract Community Farm, Albany, California, United States - DLSLS.P.R1EnvironmentalOpen in IMG/M
3300032205Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05EnvironmentalOpen in IMG/M
3300032261Lab enrichment of tropical soil microbial communities from Luquillo Experimental Forest, Puerto Rico - flux4day.12C.oxic.44.000.170 (v2)EnvironmentalOpen in IMG/M
3300032770Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_4.5EnvironmentalOpen in IMG/M
3300032783Soil microbial communities from Loxahatchee National Wildlife Refuge, Florida, United States - Lox_Sample_3.3EnvironmentalOpen in IMG/M

Geographical Distribution
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Family Sequences

Protein ID Sample Taxon ID Habitat Sequence
soilH1_1011418753300003321Sugarcane Root And Bulk SoilMSNRTWLRLLMIVLPVGVLTVSLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGVATSAQRVMRRKFGTA*
Ga0066395_1004405223300004633Tropical Forest SoilMSGRTWLQILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA*
Ga0066395_1022841413300004633Tropical Forest SoilMSGRAWLQILMIIIPIGVLSVSVGAGSIGNTVELSNKSVRIEIPEAAELFAAGTMLVGIAGSAQRVMRR
Ga0058863_1126052213300004799Host-AssociatedAYMSNRTWLQIAIIIIPLGVLTASLGARSIGATVELTSGFGRVELSEPAELFAAGTMLVAVAASAQRVMRRRLSTS*
Ga0066674_1026134013300005166SoilMSNRTWLQILTIMIPVGVLTASLGARSIGTTVELTGMPVRVEIPEAAELFAAGTMLVGVAASA
Ga0070683_10008376923300005329Corn RhizosphereMSGRTWLQILMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0070683_10009760423300005329Corn RhizosphereMSNRTWLQLAMIVLPIGVLTASLGARSIGNTVELTGRSVRLEIPESAELFAAGTMLVGVAASAQRVMRKKFGTV*
Ga0066388_10119357013300005332Tropical Forest SoilMSGRTWLQILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGS
Ga0066388_10127380923300005332Tropical Forest SoilMSGRTWLRILMISLPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELYAAGTMLVAIAGSAQRVMRRKFGSA*
Ga0066388_10624028423300005332Tropical Forest SoilMSSGAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0066388_10661850623300005332Tropical Forest SoilMSNRTWLQLAMIILPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGVAASAQRVMRKRFGTA*
Ga0070680_10054794223300005336Corn RhizosphereMSNRTWLQIAIIIIPLGVLTASLGARSIGATVELTSGFGRVELSEPAELFAAGTMLVAVAASAQRVMRRRLSTS*
Ga0070709_1144704213300005434Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQILMIMIPVGVLTASLGARSIGNTVELTGTQMHVEIPEAAELFAAGTMLVGVAASAQRVMRRKFGSA*
Ga0070713_10050719723300005436Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQVAMIILPVGVLTASLGARTIGNTVELTGRSVRVEIPESAELFAAGTMLVGVAASAQRVMRKRFGSA*
Ga0070711_10097652223300005439Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQLAMIILPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGVAASAQRVMRKRFGSV*
Ga0070681_1032654413300005458Corn RhizosphereMSNRAWLQILMIMIPVGVLTASLGARSIGNTVELTGTRMHVEIPEAAELFAAGTMLVGVAASAQRVMRRKFGSA*
Ga0070681_1052438313300005458Corn RhizosphereMSNRTWLQLAMIVLPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGIATSAERVMRRKFGTA*
Ga0073909_1000282753300005526Surface SoilMSSRAWLQIVMIIIPIGVLTVSVGAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQRVMRRKCGTA*
Ga0073909_1007282223300005526Surface SoilMSNRAWLQILTIMIPVGVLTASLGARSIANTVELTGMPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0070684_10061182823300005535Corn RhizosphereLQLAMIVLPIGVLTASLGARSIGNTVELTGRSVRLEIPESAELFAAGTMLVGVAASAQRVMRKKFGTV*
Ga0070693_10012299423300005547Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQLAMIILPVGVLTASLGARTMGNTVELTGRSVRVEIPESAELFAAGTMLVGVAASAQRVMRKKFGTA*
Ga0070693_10040612023300005547Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLRLMMIVLPVGVLTVSLGARSIGNTVELTGRSVRVEIPESAELFAVGTMLVGVATSAQRVMRKKFGTV*
Ga0068854_10147167913300005578Corn RhizosphereVNGDDMSGRTWLQILMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0070702_10010064523300005615Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLRILTIMIPVGVLTASLGARSVGNTVELTGTPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0068852_10077803923300005616Corn RhizosphereMSIRTWLQIAIIIIPLGVLTASLGARSIGPTVELTRGFGRVEMSEPAELFAAGTMLVAVAASAQRVMRRRLSTS*
Ga0066651_1015946723300006031SoilMSSRAWLQIVMIIIPIGVLTVSVGAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQRVIRRKCGTA*
Ga0066651_1064727623300006031SoilMPNRTWLQIAMIIVPIGVLTASLGARSIGNTVELTSGLVRVEIPESAELFAAGTMLVGVAASAQRVMRRRLGSA*
Ga0066652_10139191523300006046SoilEMSSRAWLQIVMIIIPIGVLTVSVGAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQRVMRRKCGTA*
Ga0070716_10102457313300006173Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQILMIMIPVGVLTASLGARSIGNTVELTGTQMHVEIPEAAELFAAGTMLVGVAASAQRVMRRKFGTA*
Ga0097621_10002155783300006237Miscanthus RhizosphereMSGRAWIQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKFGTA*
Ga0075522_1001723753300006638Arctic Peat SoilMSAKTWIHIAVIVIPIGVLTTSLGARSISNTVELSNKSVRVEMPESAELCAAGTMLMGIAASAQRVLRRRNGND*
Ga0075425_10007980943300006854Populus RhizosphereMSGRAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGAMLVGIAGSAQRVMRRRCGTA*
Ga0075434_10024135513300006871Populus RhizosphereIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGAMLVGIAGSAQRVMRRRCGTA*
Ga0079219_1044092523300006954Agricultural SoilMSGRAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0105242_1269724413300009176Miscanthus RhizosphereRTWLRILTIMIPVGVLTASLGARSVGNTVELTGTPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0126374_1190101723300009792Tropical Forest SoilMISIPIGVLTASLGARSMGNTVELSNKSVRVEIPESAELFAAGTMLVGIASSAQRVMRKRFGSA*
Ga0126380_1020596513300010043Tropical Forest SoilILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA*
Ga0126380_1120347623300010043Tropical Forest SoilMISLPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELYAAGTMLVAIAGSAQRVMRRKFGSA*
Ga0126370_1070371913300010358Tropical Forest SoilMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA*
Ga0126370_1132106823300010358Tropical Forest SoilMSSGAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKGGTA*
Ga0126372_1013551313300010360Tropical Forest SoilYLLKIRSATDGEQEFEMSSRAWLHILMFSIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA*
Ga0126372_1187969423300010360Tropical Forest SoilLLKISSAREGEREIEMSSGAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGS
Ga0126378_1051146023300010361Tropical Forest SoilMSGRTWLQILMISIPIGVLTVSLGARSIGNTVELSNKSVRVEIPESAELYAAGTMLVSIAGSAQRVMRKKFGSV*
Ga0126378_1088494223300010361Tropical Forest SoilMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELYAAGTMLLGIAGSAQRVMRKKFGSV*
Ga0126377_1307519813300010362Tropical Forest SoilMGDDMSGRAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAG
Ga0134128_1170155023300010373Terrestrial SoilLPVGVLTVSLGARSIGNTVELTGRSVRVEIPESAELFAVGTMLVGVAASAQRVMRRKFGTV*
Ga0134124_1189411313300010397Terrestrial SoilMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKFGTA*
Ga0126383_1005914923300010398Tropical Forest SoilMSGRTWLQILMISFPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELYALGTMLVGIAGSAQRVMRKKFGSA*
Ga0126383_1162615513300010398Tropical Forest SoilILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPEAAELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0134122_1006172643300010400Terrestrial SoilMSNRTWLRILTIMIPVGVLTASLGARSVGNTVELTGMPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0134122_1006803613300010400Terrestrial SoilMSNRAWLQILTIMIPVGVLTASLGARSVGNTVELTGMPMRVEIPEAAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0134123_1000694843300010403Terrestrial SoilMSNRTWLRILTIMIPVGVLTASLGARSVGNTVELTGMPVRVEIPEAAELFAAGTMLVGVAASAQRVMRRKLGSA*
Ga0105246_1231943923300011119Miscanthus RhizosphereSERVNGDDMSGRTWLQILMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0137376_1013668923300012208Vadose Zone SoilMIIVPVGVLTASLGARSIGNTVELTNGSMRVEIPESAELFAVGTMLVGVAASAQRVMRRRLGTA*
Ga0150985_10226196823300012212Avena Fatua RhizosphereMSGRNWLRILMIIVPIGVLTASVGARSIANTVELTNKSMRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0150985_10437011213300012212Avena Fatua RhizosphereEKELMSNRTWLQLLTIMIPVGVLTASLGARSIGSTVELTGTPMRVEIPEAAELFAAGTMLVGVAASAHRVMRKKLGTV*
Ga0150985_12028071013300012212Avena Fatua RhizosphereAWEMSNRTWLQIAMIMIPVGVLTASLGARTIGSTVELSGRTLRVEIPESVELFAAGTILVSVAASAQRVMRRRLGTA*
Ga0150985_12284215213300012212Avena Fatua RhizosphereQMSSRTFVYIAAVILPIGVLTASVGARSSRNAVELSSAGVRVEIPESAELFAAGTMLVGMASSAQRVMRKKLGSV*
Ga0150984_10003235923300012469Avena Fatua RhizosphereWEMSNRTWLQIAMIMIPVGVLTASLGARTIGSTVELSGRTLRVEIPESVELFAAGTILVSVAASAQRVMRRRLGTA*
Ga0150984_11045868113300012469Avena Fatua RhizosphereNGDDMSGTTWLRILMIVVPIGVLTASVGARSIANTVELTNKSVRIQVPDSAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0150984_11602712513300012469Avena Fatua RhizosphereRGEKELMSNRTWLQLLTIMIPVGVLTASLGARSIGSTVELTGTPMRVEIPEAAELFAAGTMLVGVAASAHRVMRKKLGTV*
Ga0164301_1055221023300012960SoilMSSRAWLQIVMIIIPIGVLTVSVVAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQRVMRRKCGTA*
Ga0126369_1133160923300012971Tropical Forest SoilMSGRTWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPEAAELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0157374_1001374963300013296Miscanthus RhizosphereMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA*
Ga0157376_1081366823300014969Miscanthus RhizosphereMSNRTWLRILTIMIPVGVLTASLGARSVGNTVDLTGTPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0157376_1124885313300014969Miscanthus RhizosphereMSSRAWLQIVMIIIPIGVLTVSVGAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQ
Ga0132258_1100096323300015371Arabidopsis RhizosphereMSNRTWLQILTIMIPVGVLTASLGARSIGSTVELTGMPVRVEIPEAAELFAAGTMLVGVAASAQRVMRRRLGTA*
Ga0132258_1319041023300015371Arabidopsis RhizosphereMSGRAWIQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPEAAELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0132258_1379107613300015371Arabidopsis RhizosphereMSNRAWLQILTIMIPVGVLTASLGARSIGNTVELTGMPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0132257_10123172823300015373Arabidopsis RhizosphereMSNRTWLQILTIMIPVGVLTASLGARSIGSTVELTGMPVRVEIPEAAELFAAGTMLVGGAASAQRVMRRRLGT
Ga0132255_10583700323300015374Arabidopsis RhizosphereMIIIPIGVLTVSVGAGSIGNAVELSNKSVRIEIPEAGELFAAGTMLVGIAGSAQRVMRRKCGTA*
Ga0132255_10592764013300015374Arabidopsis RhizosphereHLLKCEWRRELRGEQKKMSNRAWLQILTIMIPVGVLTASLGARSIGNTVELTGMPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA*
Ga0182041_1153357713300016294SoilLQILMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRKKFGSA
Ga0182032_1119547913300016357SoilMSRRAWLQILMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRKKFGSA
Ga0066662_1164349813300018468Grasslands SoilMSNRTWLRIAIIIIPIGVLTASLGARSIGTTVELTGGFVRVELSEPAELFAAGTMLVAVAASAQRVMRRKLSTS
Ga0066669_1081310623300018482Grasslands SoilMSSRAWLQIVMIIIPIGVLTVSVGAGSLGNTVELSNKSVRIEIPESAELFAAGTMLVAIAGSAQRVMRRKCGTA
Ga0206356_1110436913300020070Corn, Switchgrass And Miscanthus RhizosphereREMSNRTWLQLAMIVLPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGIATSAERVMRRKFGTA
Ga0206353_1193931613300020082Corn, Switchgrass And Miscanthus RhizosphereECVMSIRTWLQIAIIIIPLGVLTASLGARSIGPTVELTRGFGRVEMSEPAELFAAGTMLVAVAASAQRVMRRRLSTS
Ga0213876_1012177223300021384Plant RootsMSNRTWLQILMIMIPVGVLTASLGARSIGSTAELTRVEIPEAAELFAAGTMLVGVAASAQRVMRRKLGTV
Ga0247667_109291523300024290SoilMSGRTWLQILMISFPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELYALGTMLVGIAGSAQRVMRKKFGSA
Ga0207642_1054982423300025899Miscanthus RhizospherePVGVLTASLGARSVGNTVELTGTPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA
Ga0207685_1041118423300025905Corn, Switchgrass And Miscanthus RhizosphereMSGRAWIQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGS
Ga0207699_1100718623300025906Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQILMIMIPVGVLTASLGARSIGNTVELTGTRMHVEIPEAAELFAAGTMLVGVAASAQRVMRRKFGSA
Ga0207707_1045084023300025912Corn RhizosphereMSNRTWLQLAMIVLPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLVGIATSAERVMRRKFGTA
Ga0207707_1064770413300025912Corn RhizosphereSDQMSNRAWLQILMIMIPVGVLTASLGARSIGNTVELTGTRMHVEIPEAAELFAAGTMLVGVAASAQRVMRRKFGSA
Ga0207660_1087908823300025917Corn RhizosphereMSNRTWLQIAIIIIPLGVLTASLGARSIGATVELTSGFGRVELSEPAELFAAGTMLVAVAASAQRVMRRRLSTS
Ga0207700_1071350913300025928Corn, Switchgrass And Miscanthus RhizosphereMSGRTWLQILMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIA
Ga0207700_1177931723300025928Corn, Switchgrass And Miscanthus RhizosphereMSNRTWLQVAMIILPVGVLTASLGARTIGNTVELTGRSVRVEIPESAELFAAGTMLVGVAASAQRVMRKRFGSA
Ga0207686_1088246913300025934Miscanthus RhizosphereRVGGRTEEMSNRTWLRILTIMIPVGVLTASLGARSVGNTVELTGTPVRVEIPESAELFAAGTMLVGVAASAQRVMRRKLGTA
Ga0207665_1099235123300025939Corn, Switchgrass And Miscanthus RhizosphereMSNGTWLRLAMIILPVGVLTASLGARSIVNTVELTGHPVRVEIPESAELFAAGTMLVGVAASAQRVMRKKLVNA
Ga0207661_1011320523300025944Corn RhizosphereMSNRTWLQLAMIVLPIGVLTASLGARSIGNTVELTGRSVRLEIPESAELFAAGTMLVGVAASAQRVMRKKFGTV
Ga0207640_1144629613300025981Corn RhizosphereVNGDDMSGRTWLQILMIVIPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA
Ga0207698_1063849823300026142Corn RhizosphereMSIRTWLQIAIIIIPLGVLTASLGARSIGPTVELTRGFGRVEMSEPAELFAAGTMLVAVAASAQRVMRRRLSTS
Ga0209465_1004704423300027874Tropical Forest SoilMSGRTWLQILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA
Ga0265338_1122960813300028800RhizosphereWLRIAAIMIPIGVLTTTVGARSIGSTVELAGGAVRLHIPESVELFAAGALLVAVSASAERVMRRRLGNA
Ga0308189_1005921323300031058SoilMSSRWLQLAMIVVPIGVLTASLGARSIGNTVELTGRSMRVEVPESAELFAAGTMLVGIAASAQRVMRRRLGSETA
Ga0308197_1035945413300031093SoilTWLRIAMLMIPIGVLTVSLGARTIGSTVELTGRSVRVEIPESAELFAAGTILVGVAASAQRVMRRRLGTA
Ga0307497_1076089723300031226SoilMSNRTWLQILTIMIPVGVLTASLGARSIGTTVELTGMPVRVEIPEAAELFAAGTMLVGVAASAQR
Ga0307506_1029328723300031366SoilRGRPEEMSNRTWLQILTIMIPVGVLTASLGARSIGTTVELTGMPVRVEIPEAAELFAAGTMLVGVATSAHRVMRRKLGTA
Ga0318541_1063847823300031545SoilMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA
Ga0307469_1153140113300031720Hardwood Forest SoilMSGRAWLQILMISLPFGVLTASLGARTIGNTVELSNKSVRIEIPESAELYAAGTMLVGIAGSAQRVMRKKFGCA
Ga0307469_1161184713300031720Hardwood Forest SoilKFRRTRSRVPAYLLKISRAREGEREIEMSSGAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKGGTT
Ga0307468_10035826723300031740Hardwood Forest SoilMSNRTWLRILTIMIPVGVLTASLGARSIGNTVELTGMPVRVEIPEAAELFAAGTMLVGVAASAQRVMRRKLGTA
Ga0306919_1092237323300031879SoilMSGRTWLQILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIA
Ga0306921_1038960023300031912SoilRAWLQILMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRKKFGSA
Ga0308174_1031716823300031939SoilVVPIGVLTASVGARSIGNAVELTNKSVRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA
Ga0310916_1149568423300031942SoilWLQILMISIPIGVLTASLGARSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRKKFGSA
Ga0308173_1138800223300032074SoilMSGRNWLRILMIIVPIGVLTASVGARSIANTVELTNKSMRIQVPDAAELFAAGTMLVGIAGSAQRVMRKKCGTA
Ga0307472_10133921423300032205Hardwood Forest SoilMSSGAWLQILMIIIPIGVLTVSVGAGSIGNTVELSNKSVRIEIPESAELFAAGTMLVGIAGSAQRVMRRKGGSA
Ga0306920_10188440723300032261SoilRTWLQILMISIPIGVLTASLGARSMGNTVELSNKSVRIEIPESAELFAAGSMLVGIAGSAQRVMRKKFGSA
Ga0335085_1015146533300032770SoilMSNRTWLQLATIVLPVGVLTASLGARSIGNTVELTGRSVRVEIPESAELFAAGTMLMGVAASAQRVMRKKLGRP
Ga0335085_1241253123300032770SoilMTSRVWLRIAAIMIPIGVLTTTVGARSIGSTVELAGGAVRLHIPESVELFAAGALLVAIAASAERVMRRRLGNA
Ga0335079_1013552833300032783SoilMAGRGWLQILTIVIPVGVLTASLGARSIGNTVELSHRSVRIDIPDSAELFAAGTMLVGIAGSAQRVMRRKCGSA

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Bioinformatics & Integrated Biology Lab
Institute for Fundamental Biomedical Research
Biomedical Sciences Research Center "Alexander Fleming"
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