Metagenome Family F083110

Basic Information
Family ID	F083110
Family Type	Metagenome
Number of Sequences	113
Average Sequence Length	71 residues
Representative Sequence	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLE
Number of Associated Samples	84
Number of Associated Scaffolds	113

Quality Assessment
Transcriptomic Evidence	No
Most common taxonomic group	Archaea
% of genes with valid RBS motifs	50.91 %
% of genes near scaffold ends (potentially truncated)	95.58 %
% of genes from short scaffolds (< 2000 bps)	84.07 %
Associated GOLD sequencing projects	73
AlphaFold2 3D model prediction	No

Most Common Taxonomy
Group	Archaea (96.460 % of family members)
NCBI Taxonomy ID	2157
Taxonomy	All Organisms → cellular organisms → Archaea

Most Common Ecosystem
GOLD Ecosystem	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil (35.398 % of family members)
Environment Ontology (ENVO)	Unclassified (62.832 % of family members)
Earth Microbiome Project Ontology (EMPO)	Free-living → Non-saline → Soil (non-saline) (66.372 % of family members)

Full Alignment
Alignment of all the sequences in the family.

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Seed Alignment
Alignment of a non-redundant set of sequences, used to build the family's HMM profile.

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AlphaFold2 Input Alignment
Refined alignment used as input for AlphaFold2.

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Predicted Topology & Secondary Structure
Classification:	Globular	Signal Peptide:	No	Secondary Structure distribution:	α-helix: 51.47% β-sheet: 0.00% Coil/Unstructured: 48.53%
Feature Viewer

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Pfam ID	Name	% Frequency in 113 Family Scaffolds
PF07690	MFS_1	15.04
PF02511	Thy1	1.77
PF04138	GtrA	1.77
PF07995	GSDH	0.88
PF00162	PGK	0.88
PF03706	LPG_synthase_TM	0.88
PF13229	Beta_helix	0.88
PF02775	TPP_enzyme_C	0.88
PF12706	Lactamase_B_2	0.88
PF06026	Rib_5-P_isom_A	0.88

COG ID	Name	Functional Category	% Frequency in 113 Family Scaffolds
COG1351	Thymidylate synthase ThyX, FAD-dependent family	Nucleotide transport and metabolism [F]	1.77
COG0120	Ribose 5-phosphate isomerase	Carbohydrate transport and metabolism [G]	0.88
COG0126	3-phosphoglycerate kinase	Carbohydrate transport and metabolism [G]	0.88
COG0392	Predicted membrane flippase AglD2/YbhN, UPF0104 family	Cell wall/membrane/envelope biogenesis [M]	0.88
COG2133	Glucose/arabinose dehydrogenase, beta-propeller fold	Carbohydrate transport and metabolism [G]	0.88

Phylogeny

NCBI Taxonomy

Select NCBI taxonomy Level:

Name	Rank	Taxonomy	Distribution
All Organisms	root	All Organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
cellular organisms	root	All Organisms → cellular organisms	97.35 %
Unclassified	root	N/A	2.65 %

Name	Rank	Taxonomy	Distribution
Archaea	superkingdom	All Organisms → cellular organisms → Archaea	96.46 %
Unclassified	root	N/A	2.65 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.65 %
TACK group	clade	All Organisms → cellular organisms → Archaea → TACK group	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.65 %
Candidatus Bathyarchaeota	phylum	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.65 %
unclassified Candidatus Bathyarchaeota	no rank	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Name	Rank	Taxonomy	Distribution
Unclassified	root	N/A	2.65 %
Candidatus Bathyarchaeota archaeon	species	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	0.88 %
Bacteria	superkingdom	All Organisms → cellular organisms → Bacteria	0.88 %

Visualization

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Associated Scaffolds

Scaffold	Taxonomy	Length	IMG/M Link
2209111007\|2215219445	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300002530\|C687J35503_10191239	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300002557\|JGI25381J37097_1049116	All Organisms → cellular organisms → Archaea	694	Open in IMG/M
3300002908\|JGI25382J43887_10057015	All Organisms → cellular organisms → Archaea	2120	Open in IMG/M
3300002908\|JGI25382J43887_10487514	All Organisms → cellular organisms → Archaea	522	Open in IMG/M
3300005174\|Ga0066680_10953328	All Organisms → cellular organisms → Archaea	506	Open in IMG/M
3300005177\|Ga0066690_10171383	All Organisms → cellular organisms → Archaea	1435	Open in IMG/M
3300005178\|Ga0066688_10796062	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300005180\|Ga0066685_10158885	All Organisms → cellular organisms → Archaea	1541	Open in IMG/M
3300005180\|Ga0066685_10277864	All Organisms → cellular organisms → Archaea	1157	Open in IMG/M
3300005180\|Ga0066685_10392139	All Organisms → cellular organisms → Archaea	964	Open in IMG/M
3300005180\|Ga0066685_10745180	All Organisms → cellular organisms → Archaea	668	Open in IMG/M
3300005180\|Ga0066685_11046046	All Organisms → cellular organisms → Archaea	537	Open in IMG/M
3300005180\|Ga0066685_11114071	All Organisms → cellular organisms → Archaea	515	Open in IMG/M
3300005186\|Ga0066676_11042506	All Organisms → cellular organisms → Archaea	542	Open in IMG/M
3300005446\|Ga0066686_10076252	All Organisms → cellular organisms → Archaea	2112	Open in IMG/M
3300005447\|Ga0066689_10602900	All Organisms → cellular organisms → Archaea	692	Open in IMG/M
3300005450\|Ga0066682_10632255	All Organisms → cellular organisms → Archaea	667	Open in IMG/M
3300005540\|Ga0066697_10508421	All Organisms → cellular organisms → Archaea	682	Open in IMG/M
3300005555\|Ga0066692_10302817	All Organisms → cellular organisms → Archaea	1013	Open in IMG/M
3300005555\|Ga0066692_10570471	All Organisms → cellular organisms → Archaea	713	Open in IMG/M
3300005557\|Ga0066704_10785679	All Organisms → cellular organisms → Archaea	593	Open in IMG/M
3300005558\|Ga0066698_10024517	All Organisms → cellular organisms → Archaea	3585	Open in IMG/M
3300005558\|Ga0066698_10308109	All Organisms → cellular organisms → Archaea	1096	Open in IMG/M
3300005558\|Ga0066698_10541066	All Organisms → cellular organisms → Archaea	791	Open in IMG/M
3300005568\|Ga0066703_10877763	All Organisms → cellular organisms → Archaea	511	Open in IMG/M
3300005575\|Ga0066702_10814603	All Organisms → cellular organisms → Archaea	556	Open in IMG/M
3300006173\|Ga0070716_101660329	All Organisms → cellular organisms → Archaea	526	Open in IMG/M
3300006791\|Ga0066653_10364546	All Organisms → cellular organisms → Archaea	735	Open in IMG/M
3300006796\|Ga0066665_10004889	All Organisms → cellular organisms → Bacteria	7118	Open in IMG/M
3300006797\|Ga0066659_10280729	All Organisms → cellular organisms → Archaea	1261	Open in IMG/M
3300006797\|Ga0066659_10996409	All Organisms → cellular organisms → Archaea	700	Open in IMG/M
3300007255\|Ga0099791_10130581	All Organisms → cellular organisms → Archaea	1167	Open in IMG/M
3300007258\|Ga0099793_10111048	All Organisms → cellular organisms → Archaea	1275	Open in IMG/M
3300007258\|Ga0099793_10530499	All Organisms → cellular organisms → Archaea	586	Open in IMG/M
3300007265\|Ga0099794_10720262	All Organisms → cellular organisms → Archaea	532	Open in IMG/M
3300009012\|Ga0066710_100515382	All Organisms → cellular organisms → Archaea	1804	Open in IMG/M
3300009012\|Ga0066710_104007965	All Organisms → cellular organisms → Archaea	551	Open in IMG/M
3300009012\|Ga0066710_104266888	All Organisms → cellular organisms → Archaea	534	Open in IMG/M
3300009038\|Ga0099829_10181583	All Organisms → cellular organisms → Archaea	1694	Open in IMG/M
3300009038\|Ga0099829_10490516	All Organisms → cellular organisms → Archaea	1019	Open in IMG/M
3300009088\|Ga0099830_11784931	All Organisms → cellular organisms → Archaea	514	Open in IMG/M
3300009089\|Ga0099828_10852793	All Organisms → cellular organisms → Archaea	815	Open in IMG/M
3300009090\|Ga0099827_10060062	All Organisms → cellular organisms → Archaea	2895	Open in IMG/M
3300009822\|Ga0105066_1071928	All Organisms → cellular organisms → Archaea	743	Open in IMG/M
3300010301\|Ga0134070_10045915	All Organisms → cellular organisms → Archaea	1468	Open in IMG/M
3300010301\|Ga0134070_10153025	All Organisms → cellular organisms → Archaea	828	Open in IMG/M
3300010320\|Ga0134109_10302602	All Organisms → cellular organisms → Archaea	616	Open in IMG/M
3300010322\|Ga0134084_10392831	All Organisms → cellular organisms → Archaea	539	Open in IMG/M
3300010335\|Ga0134063_10698579	All Organisms → cellular organisms → Archaea	524	Open in IMG/M
3300010336\|Ga0134071_10717615	All Organisms → cellular organisms → Archaea	530	Open in IMG/M
3300010361\|Ga0126378_12662473	All Organisms → cellular organisms → Archaea	571	Open in IMG/M
3300012189\|Ga0137388_12000689	All Organisms → cellular organisms → Archaea	508	Open in IMG/M
3300012205\|Ga0137362_10556997	All Organisms → cellular organisms → Archaea	990	Open in IMG/M
3300012210\|Ga0137378_11400682	All Organisms → cellular organisms → Archaea	613	Open in IMG/M
3300012356\|Ga0137371_10025749	All Organisms → cellular organisms → Archaea	4531	Open in IMG/M
3300012356\|Ga0137371_10338566	All Organisms → cellular organisms → Archaea	1170	Open in IMG/M
3300012918\|Ga0137396_10050959	All Organisms → cellular organisms → Archaea	2839	Open in IMG/M
3300012918\|Ga0137396_10267658	All Organisms → cellular organisms → Archaea	1262	Open in IMG/M
3300012918\|Ga0137396_10377716	All Organisms → cellular organisms → Archaea	1050	Open in IMG/M
3300012918\|Ga0137396_10605796	All Organisms → cellular organisms → Archaea	810	Open in IMG/M
3300012922\|Ga0137394_10955035	All Organisms → cellular organisms → Archaea	714	Open in IMG/M
3300012927\|Ga0137416_12137001	All Organisms → cellular organisms → Archaea	514	Open in IMG/M
3300012944\|Ga0137410_11097920	All Organisms → cellular organisms → Archaea	681	Open in IMG/M
3300012975\|Ga0134110_10287848	All Organisms → cellular organisms → Archaea	707	Open in IMG/M
3300012975\|Ga0134110_10431909	All Organisms → cellular organisms → Archaea	589	Open in IMG/M
3300015357\|Ga0134072_10388881	All Organisms → cellular organisms → Archaea	546	Open in IMG/M
3300015359\|Ga0134085_10329292	All Organisms → cellular organisms → Archaea	676	Open in IMG/M
3300017656\|Ga0134112_10477176	All Organisms → cellular organisms → Archaea → TACK group → Candidatus Bathyarchaeota → unclassified Candidatus Bathyarchaeota → Candidatus Bathyarchaeota archaeon	525	Open in IMG/M
3300017657\|Ga0134074_1220711	All Organisms → cellular organisms → Archaea	676	Open in IMG/M
3300017657\|Ga0134074_1271152	All Organisms → cellular organisms → Archaea	614	Open in IMG/M
3300017659\|Ga0134083_10034224	All Organisms → cellular organisms → Archaea	1865	Open in IMG/M
3300017659\|Ga0134083_10309355	All Organisms → cellular organisms → Archaea	672	Open in IMG/M
3300018090\|Ga0187770_10676937	All Organisms → cellular organisms → Archaea	823	Open in IMG/M
3300018431\|Ga0066655_10058639	All Organisms → cellular organisms → Archaea	2015	Open in IMG/M
3300018431\|Ga0066655_10268586	All Organisms → cellular organisms → Archaea	1098	Open in IMG/M
3300018433\|Ga0066667_10856127	All Organisms → cellular organisms → Archaea	778	Open in IMG/M
3300018468\|Ga0066662_11885874	All Organisms → cellular organisms → Archaea	625	Open in IMG/M
3300018482\|Ga0066669_10009392	All Organisms → cellular organisms → Archaea	4876	Open in IMG/M
3300021046\|Ga0215015_10006849	All Organisms → cellular organisms → Archaea	646	Open in IMG/M
3300025174\|Ga0209324_10010168	All Organisms → cellular organisms → Archaea	6394	Open in IMG/M
3300025314\|Ga0209323_10020807	All Organisms → cellular organisms → Archaea	4487	Open in IMG/M
3300025314\|Ga0209323_10123281	All Organisms → cellular organisms → Archaea	1743	Open in IMG/M
3300025922\|Ga0207646_10800844	All Organisms → cellular organisms → Archaea	839	Open in IMG/M
3300026296\|Ga0209235_1037248	All Organisms → cellular organisms → Archaea	2453	Open in IMG/M
3300026297\|Ga0209237_1263705	All Organisms → cellular organisms → Archaea	528	Open in IMG/M
3300026298\|Ga0209236_1130975	All Organisms → cellular organisms → Archaea	1093	Open in IMG/M
3300026309\|Ga0209055_1168751	All Organisms → cellular organisms → Archaea	693	Open in IMG/M
3300026313\|Ga0209761_1008064	All Organisms → cellular organisms → Archaea	6890	Open in IMG/M
3300026313\|Ga0209761_1208345	All Organisms → cellular organisms → Archaea	844	Open in IMG/M
3300026328\|Ga0209802_1136870	All Organisms → cellular organisms → Archaea	1054	Open in IMG/M
3300026329\|Ga0209375_1020773	All Organisms → cellular organisms → Archaea	3770	Open in IMG/M
3300026332\|Ga0209803_1057488	All Organisms → cellular organisms → Archaea	1695	Open in IMG/M
3300026332\|Ga0209803_1077007	All Organisms → cellular organisms → Archaea	1403	Open in IMG/M
3300026332\|Ga0209803_1089006	All Organisms → cellular organisms → Archaea	1279	Open in IMG/M
3300026523\|Ga0209808_1237581	All Organisms → cellular organisms → Archaea	583	Open in IMG/M
3300026524\|Ga0209690_1311329	All Organisms → cellular organisms → Archaea	501	Open in IMG/M
3300026527\|Ga0209059_1170579	All Organisms → cellular organisms → Archaea	767	Open in IMG/M
3300026529\|Ga0209806_1257272	All Organisms → cellular organisms → Archaea	587	Open in IMG/M
3300026532\|Ga0209160_1215109	All Organisms → cellular organisms → Archaea	686	Open in IMG/M
3300026538\|Ga0209056_10101411	All Organisms → cellular organisms → Archaea	2346	Open in IMG/M
3300026542\|Ga0209805_1375857	All Organisms → cellular organisms → Archaea	544	Open in IMG/M
3300026552\|Ga0209577_10474343	All Organisms → cellular organisms → Archaea	853	Open in IMG/M
3300027384\|Ga0209854_1092413	All Organisms → cellular organisms → Archaea	540	Open in IMG/M
3300027643\|Ga0209076_1141891	All Organisms → cellular organisms → Archaea	674	Open in IMG/M
3300027846\|Ga0209180_10626366	All Organisms → cellular organisms → Archaea	592	Open in IMG/M
3300027882\|Ga0209590_10321739	All Organisms → cellular organisms → Archaea	995	Open in IMG/M
3300028536\|Ga0137415_10562955	All Organisms → cellular organisms → Archaea	949	Open in IMG/M
3300031820\|Ga0307473_10904784	All Organisms → cellular organisms → Archaea	637	Open in IMG/M
3300032205\|Ga0307472_101890494	All Organisms → cellular organisms → Archaea	595	Open in IMG/M

Environmental Properties

Associated Habitat Types

Select Environment Taxonomy Level:

Habitat	Taxonomy	Distribution
Environmental	Environmental	100.00%

Habitat	Taxonomy	Distribution
Terrestrial	Environmental → Terrestrial	100.00%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil	99.11%
Rock-Dwelling (Subaerial Biofilms)	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms)	0.89%

Habitat	Taxonomy	Distribution
Unclassified	Environmental → Terrestrial → Soil → Unclassified	93.81%
Loam	Environmental → Terrestrial → Soil → Loam	2.65%
Sand	Environmental → Terrestrial → Soil → Sand	1.77%
Wetlands	Environmental → Terrestrial → Soil → Wetlands	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Grasslands	Environmental → Terrestrial → Soil → Unclassified → Grasslands	49.56%
Unclassified	Environmental → Terrestrial → Soil → Unclassified → Unclassified	41.59%
Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil	2.65%
Agricultural Soil	Environmental → Terrestrial → Soil → Loam → Agricultural Soil	1.77%
Unclassified	Environmental → Terrestrial → Soil → Sand → Unclassified	1.77%
Unclassified	Environmental → Terrestrial → Soil → Wetlands → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Soil → Loam → Unclassified	0.89%
Unclassified	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified	0.89%

Habitat	Taxonomy	Distribution
Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Soil	35.40%
Vadose Zone Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Vadose Zone Soil	23.89%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Grasslands → Grasslands Soil	14.16%
Grasslands Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Grasslands Soil	13.27%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	2.65%
Hardwood Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Hardwood Forest Soil	1.77%
Corn, Switchgrass And Miscanthus Rhizosphere	Environmental → Terrestrial → Soil → Loam → Agricultural Soil → Corn, Switchgrass And Miscanthus Rhizosphere	1.77%
Groundwater Sand	Environmental → Terrestrial → Soil → Sand → Unclassified → Groundwater Sand	1.77%
Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Soil	0.89%
Tropical Forest Soil	Environmental → Terrestrial → Soil → Unclassified → Unclassified → Tropical Forest Soil	0.89%
Soil	Environmental → Terrestrial → Soil → Unclassified → Forest Soil → Soil	0.89%
Tropical Peatland	Environmental → Terrestrial → Soil → Wetlands → Unclassified → Tropical Peatland	0.89%
Soil	Environmental → Terrestrial → Soil → Loam → Unclassified → Soil	0.89%
Speleothem And Rock Wall Surfaces	Environmental → Terrestrial → Rock-Dwelling (Subaerial Biofilms) → Unclassified → Unclassified → Speleothem And Rock Wall Surfaces	0.89%

Visualization

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Associated Samples

Taxon OID	Sample Name	Habitat Type	IMG/M Link
2209111007	Cave microbial community (Dry rock wall)	Environmental	Open in IMG/M
3300002530	Soil microbial communities from Rifle, Colorado - Rifle CSP2_sed 19_3	Environmental	Open in IMG/M
3300002557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_20cm	Environmental	Open in IMG/M
3300002908	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 08_20_2013_1_40cm	Environmental	Open in IMG/M
3300005174	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129	Environmental	Open in IMG/M
3300005177	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_139	Environmental	Open in IMG/M
3300005178	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_137	Environmental	Open in IMG/M
3300005180	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_134	Environmental	Open in IMG/M
3300005186	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_125	Environmental	Open in IMG/M
3300005446	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_135	Environmental	Open in IMG/M
3300005447	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138	Environmental	Open in IMG/M
3300005450	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131	Environmental	Open in IMG/M
3300005540	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_146	Environmental	Open in IMG/M
3300005555	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_141	Environmental	Open in IMG/M
3300005557	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153	Environmental	Open in IMG/M
3300005558	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_147	Environmental	Open in IMG/M
3300005568	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152	Environmental	Open in IMG/M
3300005575	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151	Environmental	Open in IMG/M
3300006173	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - LAR L11-2 metaG	Environmental	Open in IMG/M
3300006791	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_102	Environmental	Open in IMG/M
3300006796	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114	Environmental	Open in IMG/M
3300006797	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_108	Environmental	Open in IMG/M
3300007255	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_1	Environmental	Open in IMG/M
3300007258	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3	Environmental	Open in IMG/M
3300007265	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - Rivendell_Oct2014_Saprolite_2_DNA_Rhizosphere_1	Environmental	Open in IMG/M
3300009012	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_159	Environmental	Open in IMG/M
3300009038	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG	Environmental	Open in IMG/M
3300009088	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H3.8 metaG	Environmental	Open in IMG/M
3300009089	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H1.8 metaG	Environmental	Open in IMG/M
3300009090	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG	Environmental	Open in IMG/M
3300009822	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S1_30_40	Environmental	Open in IMG/M
3300010301	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09082015	Environmental	Open in IMG/M
3300010320	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_11112015	Environmental	Open in IMG/M
3300010322	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Glu_20cm_2_24_1 metaG	Environmental	Open in IMG/M
3300010335	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_09082015	Environmental	Open in IMG/M
3300010336	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_09082015	Environmental	Open in IMG/M
3300010361	Tropical forest soil microbial communities from Panama - MetaG Plot_23	Environmental	Open in IMG/M
3300012189	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - 15con2h1.4A metaG	Environmental	Open in IMG/M
3300012205	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - Mad1_100_16 metaG	Environmental	Open in IMG/M
3300012210	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage2_L_60_16 metaG	Environmental	Open in IMG/M
3300012356	Vadose zone soil microbial communities from Sagehorn Ranch, Mendocino, California, USA - Sage1_R_40_16 metaG	Environmental	Open in IMG/M
3300012918	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czcobulk3.16 metaG	Environmental	Open in IMG/M
3300012922	Vadose zone soil microbial communities from Angelo Coast Range Reserve, California, USA - czobulk1.16 metaG	Environmental	Open in IMG/M
3300012927	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012944	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug1_16fungal (Illumina Assembly)	Environmental	Open in IMG/M
3300012975	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_5_11112015	Environmental	Open in IMG/M
3300015357	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Wat_20cm_5_0_1 metaG	Environmental	Open in IMG/M
3300015359	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_20cm_2_09182015	Environmental	Open in IMG/M
3300017656	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_5_11112015	Environmental	Open in IMG/M
3300017657	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Rain_40cm_2_09212015	Environmental	Open in IMG/M
3300017659	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - 15_D_Met_40cm_5_24_1 metaG	Environmental	Open in IMG/M
3300018090	Tropical peat soil microbial communities from peatlands in Department of Meta, Colombia - 0116_SJ02_MP02_20_MG	Environmental	Open in IMG/M
3300018431	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_104	Environmental	Open in IMG/M
3300018433	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_116	Environmental	Open in IMG/M
3300018468	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_111	Environmental	Open in IMG/M
3300018482	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_118	Environmental	Open in IMG/M
3300021046	Soil microbial communities from Shale Hills CZO, Pennsylvania, United States - 90cm depth	Environmental	Open in IMG/M
3300025174	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 3	Environmental	Open in IMG/M
3300025314	Soil microbial communities from Rifle, Colorado, USA - sediment 19ft 2	Environmental	Open in IMG/M
3300025922	Corn, switchgrass and miscanthus rhizosphere microbial communities from Kellogg Biological Station, Michigan, USA - KBS K5-50-2 metaG (SPAdes)	Environmental	Open in IMG/M
3300026296	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_20cm (SPAdes)	Environmental	Open in IMG/M
3300026297	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 10_02_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026298	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_27_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026309	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_110 (SPAdes)	Environmental	Open in IMG/M
3300026313	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample 09_25_2013_1_40cm (SPAdes)	Environmental	Open in IMG/M
3300026328	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_129 (SPAdes)	Environmental	Open in IMG/M
3300026329	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_131 (SPAdes)	Environmental	Open in IMG/M
3300026332	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_138 (SPAdes)	Environmental	Open in IMG/M
3300026499	Soil microbial communities from H.J. Andrews Experimental Forest, Oregon, United States - NR-06-B	Environmental	Open in IMG/M
3300026523	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_157 (SPAdes)	Environmental	Open in IMG/M
3300026524	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_150 (SPAdes)	Environmental	Open in IMG/M
3300026527	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_151 (SPAdes)	Environmental	Open in IMG/M
3300026529	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_152 (SPAdes)	Environmental	Open in IMG/M
3300026532	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_153 (SPAdes)	Environmental	Open in IMG/M
3300026538	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_114 (SPAdes)	Environmental	Open in IMG/M
3300026542	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_148 (SPAdes)	Environmental	Open in IMG/M
3300026552	Grasslands soil microbial communities from the Angelo Coastal Reserve, California, USA - Sample Angelo_109 (SPAdes)	Environmental	Open in IMG/M
3300027384	Groundwater microbial communities from the Columbia River, Washington, USA - GW-RW S3_30_40 (SPAdes)	Environmental	Open in IMG/M
3300027643	Vadose zone soil and rhizosphere microbial communities from the Eel River Critical Zone Observatory, Northern California to study diel carbon cycling - Rivendell_Oct2014_Saprolite_2_DNA_Bulk_3 (SPAdes)	Environmental	Open in IMG/M
3300027846	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con2H2.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300027882	Vadose zone soil microbial communities from the Eel River Critical Zone Observatory, Northern California, USA - CZOApr15con1.8 metaG (SPAdes)	Environmental	Open in IMG/M
3300028536	Vadose zone soil fungal communities from Angelo Coast Range Reserve, California, USA - CZODoug3_1_1_16fungal (Hybrid Assembly)	Environmental	Open in IMG/M
3300031820	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_515	Environmental	Open in IMG/M
3300032205	Hardwood forest soil microbial communities from Morgan-Monroe State Forest, Indiana, United States - atmos_gasesAM5C_05	Environmental	Open in IMG/M

Geographical Distribution

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Family Sequences

Protein ID	Sample Taxon ID	Habitat	Sequence
2214284683	2209111007	Speleothem And Rock Wall Surfaces	LGLSKTPDRLADELFALDPRVRYVAVLDRNHKLVESRMRSSVHSLTGEEYDKKFMRSVPPLILDILAQLEAQVGFLSHISIQYERVDLVFSRSTLRFWHLV
C687J35503_101912391	3300002530	Soil	LSKPSSHLADELFALDTRVRYVAVLDRNHKLVESRMRSSVHSLTPEEYDRKXMGSVPPLILDILSQLERQCGPVSHISIQYEKVDLVLFP
JGI25381J37097_10491161	3300002557	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYD
JGI25382J43887_100570151	3300002908	Grasslands Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQC
JGI25382J43887_104875141	3300002908	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLET
Ga0066680_109533281	3300005174	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMGSVPPMILDT
Ga0066690_101713832	3300005177	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDT
Ga0066688_107960621	3300005178	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYD
Ga0066685_101588851	3300005180	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGS
Ga0066685_102778641	3300005180	Soil	MHCRERNDSSLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKF
Ga0066685_103921393	3300005180	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSSVPPMILDTLSQL
Ga0066685_107451801	3300005180	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMGSVPP
Ga0066685_110460461	3300005180	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVLSLTPETYDRKFMGSV
Ga0066685_111140712	3300005180	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKF
Ga0066676_110425061	3300005186	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILD
Ga0066686_100762521	3300005446	Soil	LSRPQTRLVDELFALDSRVRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSSVPPMILDTLSQLENQCGPLAHIS
Ga0066689_106029001	3300005447	Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYD
Ga0066682_106322551	3300005450	Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDT
Ga0066697_105084211	3300005540	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSV
Ga0066692_103028172	3300005555	Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYD
Ga0066692_105704711	3300005555	Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLESQCGPLAHISIQYQKVDLVI
Ga0066704_107856791	3300005557	Soil	LSRPQTRLVDELFALDSRIRYAALLDRNSKLLESRMRSNVMSLTPETYD
Ga0066698_100245175	3300005558	Soil	VEANDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDT
Ga0066698_103081091	3300005558	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSSVPPMILDTLSQLENQCGPLAHI
Ga0066698_105410662	3300005558	Soil	LSSHSAHPADDLFALDNRVRYVAVLDRNHKLIESRMRSSVHSLTPETYDRKFMGSVPPLVFDTLSQLEEQCGPISHMTVQY
Ga0066703_108777631	3300005568	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEKIDLIFLPH
Ga0066702_108146031	3300005575	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSS
Ga0070716_1016603292	3300006173	Corn, Switchgrass And Miscanthus Rhizosphere	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLTHISIQYQKVDLVIFPHNNQ
Ga0066653_103645462	3300006791	Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEGQCGPLSHISVQYEKV
Ga0066665_100048899	3300006796	Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEDYDRKFMGSVPPLILDTLSQLENQCGPLSHISVQYEKIDLIFIPHNN
Ga0066659_102807292	3300006797	Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSV
Ga0066659_109964091	3300006797	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLTHISIQYQKVDLVIF
Ga0099791_101305812	3300007255	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQ
Ga0099793_101110482	3300007258	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVP
Ga0099793_105304992	3300007258	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPL
Ga0099794_106680132	3300007265	Vadose Zone Soil	MSRTGASLVDQLFALDTRIRYVAILDRNQRLKESRMRSNVPSLTPEAYD
Ga0099794_107202621	3300007265	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTL
Ga0066710_1005153821	3300009012	Grasslands Soil	LSSHSAHPADDLFALDNRVRYVAVLDRNHKLIESRMRSSVHSLTPETYDRKFMGSVPPLVFDTLSQLEAQCGPI
Ga0066710_1040079651	3300009012	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTL
Ga0066710_1042668881	3300009012	Grasslands Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSSVPPMI
Ga0099829_101815832	3300009038	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLI
Ga0099829_104905161	3300009038	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLTHISIQYQKVDLV
Ga0099830_117849311	3300009088	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQL
Ga0099828_108527931	3300009089	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQ
Ga0099827_100600623	3300009090	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLEKQCGPLTHISI
Ga0105066_10719281	3300009822	Groundwater Sand	LSRTPDRLADELFALDPRVRYVAVLDRNHKLVESRMRSSVHSLTGEEYDKKFMRSVPPLIMDILAQLEGQVGSLSHISIQYERVDLVFFPLNTQIL
Ga0134070_100459152	3300010301	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPP
Ga0134070_101530251	3300010301	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEGQCGPLSHISVQYEK
Ga0134109_103026021	3300010320	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEGQ
Ga0134084_103928311	3300010322	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEDYDRKFMGSVPPLILDTLSQLENQCGPLSHISVQ
Ga0134063_106985791	3300010335	Grasslands Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVLSLTPETY
Ga0134071_107176152	3300010336	Grasslands Soil	LGSPPNHVVDDLFALDTRVRYVAVLDRNHKLVESRMRSAVHSLTPETYDRKFMASVPPLVLDTLSQLEEQCGPLS
Ga0126378_126624731	3300010361	Tropical Forest Soil	MSRPQSRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMIIDTLSQLENQCGPLTHISIQYQKVDLVIFPHQSQVVAI
Ga0137388_120006891	3300012189	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMTLDPL
Ga0137362_105569973	3300012205	Vadose Zone Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPP
Ga0137378_114006822	3300012210	Vadose Zone Soil	LSRPFTRLIDDLFALDPRVRYVAVLDRNHRLVESRMRTHVASFTPEDYDRKFMGSVPPLILDTLSQLEGQCGPLSHISVQYEK
Ga0137371_100257491	3300012356	Vadose Zone Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLIL
Ga0137371_103385661	3300012356	Vadose Zone Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQ
Ga0137396_100509593	3300012918	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVTSFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEKIDLIFLPH
Ga0137396_102676581	3300012918	Vadose Zone Soil	LSKPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRK
Ga0137396_103777161	3300012918	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLVLDTLSQLEAQCGPLSHISVQYE
Ga0137396_106057961	3300012918	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMGSVPPMILDTLSQLENQCG
Ga0137396_108363083	3300012918	Vadose Zone Soil	MSRTGPSLVDQLFALDTRIRYVAILDRNQRLKESRMRSNVPSLTPEA
Ga0137394_109550352	3300012922	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQREAQCGLLSHI
Ga0137416_121370011	3300012927	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLESQCGPLSHISVQYEKI
Ga0137410_110979202	3300012944	Vadose Zone Soil	MSRTGPSLVDQLFALDTRIRYVAILDRNQRLKESRMRSNVPSLTPEAYDRKFMSSVPPLVLDALQQ
Ga0134110_102878481	3300012975	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEGQCGPLSHIS
Ga0134110_104319092	3300012975	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEDYDRKFMG
Ga0134072_103888811	3300015357	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMG
Ga0134085_103292921	3300015359	Grasslands Soil	LSKPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYD
Ga0134112_104771761	3300017656	Grasslands Soil	LSRPQTRLVDELFALDSRVRYVALLDRNSKLLESRMRSNVMSLTPETY
Ga0134074_12207111	3300017657	Grasslands Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEGQCGPLS
Ga0134074_12711521	3300017657	Grasslands Soil	LSKPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMGSVPPMILDTLSQLEN
Ga0134083_100342242	3300017659	Grasslands Soil	LSVSSRLADDLFALDDRVRYVAVLDRNHKLVESRMRSSVMSLTPGEYDRKFMGSVPPLVLDTVSQFEAQCGPVSHISIQYQRVDLVFFPYNN
Ga0134083_103093551	3300017659	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHIS
Ga0187770_106769371	3300018090	Tropical Peatland	LSRPFALRIDDLFALDPRVRYVAVLDRNHRLVESRMRTHVASFTPEDWDRKFMGSVPPLILDTPSQLEGQCGPLSHISVQYEKIDLI
Ga0066655_100586392	3300018431	Grasslands Soil	MLRKAFSNRFRGDNPVDHRMSRTGPSLVDQLFALDNRIRYVAILDRNQRLKESRMRSNVPSLTPEAYDRKFMSSVPPLVLDALQQLETHGGQLEQISIQ
Ga0066655_102685861	3300018431	Grasslands Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFM
Ga0066667_108561272	3300018433	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCG
Ga0066662_118858741	3300018468	Grasslands Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLAHIS
Ga0066669_100093927	3300018482	Grasslands Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMGSVPPMILDTLS
Ga0215015_100068491	3300021046	Soil	LSRPQARLADDLFALDQRIRYVALLDRNHKLVESRMRTNIASFTPESYDRKFMGSVPPLI
Ga0209324_100101681	3300025174	Soil	LGLSRTPDRLADELFALDPRVRYVAVLDRNHKLVESRMRSTVHSLTGEEYDKKFMRSVPPLILDILTQLEGQVGSLSH
Ga0209323_100208075	3300025314	Soil	LGLSRTPDRLADELFALDPRVRYVAVLDRNHKLVESRMRSTVHSLTGEEYDKKFMRSVPPLILDILTQLEGQVGSLSHISIQ
Ga0209323_101232811	3300025314	Soil	LSKPSSHLADELFALDTRVRYVAVLDRNHKLVESRMRSSVHSLTPEEYDRKFMGSVPPLILDILSQLERQCGP
Ga0207646_108008442	3300025922	Corn, Switchgrass And Miscanthus Rhizosphere	LSRPQARLADDLFALDSRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEKID
Ga0209235_10372484	3300026296	Grasslands Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLAHISIQYQKVDLVIFPHNNQIVA
Ga0209237_12637051	3300026297	Grasslands Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLAHISIQYQKVDLVIFPHNNQI
Ga0209236_11309752	3300026298	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLESQCGPLSHISVQ
Ga0209055_11687511	3300026309	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEKI
Ga0209761_100806410	3300026313	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLESQCGP
Ga0209761_12083451	3300026313	Grasslands Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLS
Ga0209802_11368702	3300026328	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDR
Ga0209375_10207732	3300026329	Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEDYDRKFMGSVPPLILDTLSQLENQCGPLSHISVQYEKVDLIFIPHNNQIIALIHL
Ga0209803_10574881	3300026332	Soil	MTPSLSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLE
Ga0209803_10770072	3300026332	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLE
Ga0209803_10890062	3300026332	Soil	LSRPFARLIDDLFALDQRVRYVAVLDRNHRLVESRMRTHVASFTPEEYDRKFMGSVPPLVLDTLSQLEG
Ga0257181_10877291	3300026499	Soil	MSRTGPSLVDQLFALDTRIRYVAILDRNQRLKESRMRSNVPSLTPEAYDRKFMSS
Ga0209808_12375811	3300026523	Soil	LSRPQARLADDLFALDSRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPL
Ga0209690_13113291	3300026524	Soil	VYADEPNDSRLSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLESQCGPLAHIS
Ga0209059_11705791	3300026527	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLSQLENQCGPLTHISI
Ga0209806_12572721	3300026529	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLESQCGPL
Ga0209160_12151091	3300026532	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEK
Ga0209056_101014113	3300026538	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMSSVPPMILDTLSQLEN
Ga0209805_13758571	3300026542	Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMG
Ga0209577_104743431	3300026552	Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLIESRMRTSVASFTPESYDRKFMGSVPPLILDTLSQLEAQCGPLSHISVQYEKI
Ga0209854_10924131	3300027384	Groundwater Sand	LGLSRTPDRLADELFALDPRVRYVAVLDRNHKLVESRMRSSVHSLTGEEYDKKFMRSVPPLIMDILAQLEGQVGSLSHISIQYERVDLVFFPLNTQILAL
Ga0209076_11418911	3300027643	Vadose Zone Soil	LSRPQTRLVDELFALDSRIRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMILDTLS
Ga0209180_106263661	3300027846	Vadose Zone Soil	LSSPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKF
Ga0209590_103217391	3300027882	Vadose Zone Soil	LSRPQTRLVDELFALDSRVRYVALLDRNSKLLESRMRSNVMSLTPETYDRKFMASVPPMI
Ga0137415_105629552	3300028536	Vadose Zone Soil	LSRPQARLADDLFALDPRIRYVALLDRNHKLVESRMRTSVASFTPESYDRKF
Ga0307473_109047841	3300031820	Hardwood Forest Soil	MSRTGPSLVDQLFALDTRIRYVALLDRNQRLKESRMRSNVHSLTPEAYDRKFMSSVPPLVLDALQQLEAQCGPL
Ga0307472_1018904942	3300032205	Hardwood Forest Soil	MSRTGPSLVDQLFALDTRIRYVALLDRNQRLKESRMRSNVHSLTPEAYDRKFMSSVPPLVLDALQQLEAQCGPLEQISIQYQR

NMPFamsDB

NMPFamsDB

NMPFamsDB

A database of Novel Metagenome Protein Families

A database of Novel Metagenome Protein Clusters

A database of Novel Metagenome Protein Clusters

Metagenome Family F083110

Overview

Multiple Sequence Alignments

Structure & Topology

Predicted Secondary Structure and Topology

Gene Neighborhood

Neighboring Pfam domains

Neighboring Clusters of Orthologous Genes (COGs)

Phylogeny

NCBI Taxonomy

Associated Scaffolds

Environmental Properties

Associated Habitat Types

Associated Samples

Family Sequences

Hidden Markov Model


Click on a Sequence Logo column to get its information.
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